BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713139.2.1
(487 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF484290.1|CF484290 POL1_4_G12.b1_A002 Pollen Sorghum bi... 410 e-113
gb|CF485401.1|CF485401 POL1_31_G03.b1_A002 Pollen Sorghum b... 402 e-110
gb|CW057869.1|CW057869 104_300_10518446_1_30040 Sorghum met... 391 e-107
gb|CW057963.1|CW057963 104_300_10518494_1_30028 Sorghum met... 391 e-107
gb|CF486717.1|CF486717 POL1_39_G12.b1_A002 Pollen Sorghum b... 351 4e-095
gb|BZ625779.1|BZ625779 ih40f11.b1 WGS-SbicolorF (DH5a methy... 347 6e-094
gb|CF485217.1|CF485217 POL1_30_D08.b1_A002 Pollen Sorghum b... 341 4e-092
gb|CW173472.1|CW173472 104_585_11156865_148_36555_045 Sorgh... 182 2e-044
gb|BG051603.1|BG051603 FM1_58_F09.g1_A003 Floral-Induced Me... 127 1e-027
gb|CF428262.1|CF428262 PH1_14_E03.b1_A002 Phosphorous-defic... 127 1e-027
gb|CX606143.1|CX606143 ANR1_1_H06.b1_A002 Anaerobic roots S... 127 1e-027
gb|CW022942.1|CW022942 104_162_10432148_1_30008 Sorghum met... 125 4e-027
gb|CW044141.1|CW044141 104_280_10508784_115_30241 Sorghum m... 125 4e-027
gb|CW041247.1|CW041247 104_274_10506462_114_30468 Sorghum m... 119 2e-025
gb|CW041248.1|CW041248 104_274_10506462_116_30432 Sorghum m... 119 2e-025
gb|CW041249.1|CW041249 104_274_10506462_116_30480 Sorghum m... 119 2e-025
gb|CW441621.1|CW441621 fsbb001f160n21f0 Sorghum methylation... 119 2e-025
gb|AW565625.1|AW565625 LG1_347_B05.g1_A002 Light Grown 1 (L... 119 2e-025
gb|AW672110.1|AW672110 LG1_357_G06.b1_A002 Light Grown 1 (L... 119 2e-025
gb|AW679715.1|AW679715 WS1_30_A07.g1_A002 Water-stressed 1 ... 119 2e-025
gb|BE356388.1|BE356388 DG1_124_E09.g1_A002 Dark Grown 1 (DG... 119 2e-025
gb|BE356515.1|BE356515 DG1_125_E11.g1_A002 Dark Grown 1 (DG... 119 2e-025
gb|BE358022.1|BE358022 DG1_23_B01.g1_A002 Dark Grown 1 (DG1... 119 2e-025
gb|BE358177.1|BE358177 DG1_24_A11.g1_A002 Dark Grown 1 (DG1... 119 2e-025
gb|BE358423.1|BE358423 DG1_29_G02.g1_A002 Dark Grown 1 (DG1... 119 2e-025
gb|BE358654.1|BE358654 DG1_30_F10.g1_A002 Dark Grown 1 (DG1... 119 2e-025
gb|BE366419.1|BE366419 PI1_33_C11.g1_A002 Pathogen induced ... 119 2e-025
gb|BE593863.1|BE593863 WS1_103_C05.g1_A002 Water-stressed 1... 119 2e-025
gb|BE594909.1|BE594909 PI1_47_D08.g1_A002 Pathogen induced ... 119 2e-025
gb|BF480986.1|BF480986 FM1_15_H10.g1_A003 Floral-Induced Me... 119 2e-025
gb|BF586505.1|BF586505 FM1_29_A11.g1_A003 Floral-Induced Me... 119 2e-025
gb|BF587993.1|BF587993 FM1_35_D06.g1_A003 Floral-Induced Me... 119 2e-025
gb|BF705335.1|BF705335 RHIZ2_3_G04.g1_A003 Rhizome2 (RHIZ2)... 119 2e-025
gb|BG102056.1|BG102056 RHIZ2_24_C09.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BG102550.1|BG102550 RHIZ2_34_D11.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BG239905.1|BG239905 OV1_30_E05.g1_A002 Ovary 1 (OV1) Sor... 119 2e-025
gb|BG273377.1|BG273377 OV2_28_H10.g1_A002 Ovary 2 (OV2) Sor... 119 2e-025
gb|BG356319.1|BG356319 EM1_21_A11.g1_A002 Embryo 1 (EM1) So... 119 2e-025
gb|BG487841.1|BG487841 RHIZ2_60_A05.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BG488041.1|BG488041 RHIZ2_62_E05.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BG557601.1|BG557601 EM1_53_G10.g1_A002 Embryo 1 (EM1) So... 119 2e-025
gb|BG559680.1|BG559680 RHIZ2_72_E06.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BG559827.1|BG559827 RHIZ2_74_B04.g1_A003 Rhizome2 (RHIZ2... 119 2e-025
gb|BI074277.1|BI074277 IP1_13_F03.g1_A002 Immature pannicle... 119 2e-025
gb|BI076306.1|BI076306 IP1_25_E08.g1_A002 Immature pannicle... 119 2e-025
gb|BI098045.1|BI098045 IP1_31_D03.g1_A002 Immature pannicle... 119 2e-025
gb|BM327844.1|BM327844 PIC1_18_B12.g1_A002 Pathogen-infecte... 119 2e-025
gb|CD219947.1|CD219947 CCC1_60_H06.b1_A007 Callus culture/c... 119 2e-025
gb|CD222142.1|CD222142 CCC1_2_D07.b1_A007 Callus culture/ce... 119 2e-025
gb|CD222334.1|CD222334 CCC1_21_F04.b1_A007 Callus culture/c... 119 2e-025
gb|CD222615.1|CD222615 CCC1_23_A08.b1_A007 Callus culture/c... 119 2e-025
gb|CD224153.1|CD224153 CCC1_32_E07.b1_A007 Callus culture/c... 119 2e-025
gb|CD225267.1|CD225267 CCC1_39_C03.b1_A007 Callus culture/c... 119 2e-025
gb|CD228676.1|CD228676 CCC1_9_A02.b1_A007 Callus culture/ce... 119 2e-025
gb|CD234542.1|CD234542 SS1_14_G07.b1_A012 Salt-stressed see... 119 2e-025
gb|CD236168.1|CD236168 SS1_32_E11.b1_A012 Salt-stressed see... 119 2e-025
gb|CD462131.1|CD462131 SA1_39_D04.b1_A002 Salicylic acid-tr... 119 2e-025
gb|CF073403.1|CF073403 FE1_10_D06.b1_A002 Iron-deficient se... 119 2e-025
gb|CF427565.1|CF427565 PH1_16_E09.b1_A002 Phosphorous-defic... 119 2e-025
gb|CF428663.1|CF428663 PH1_17_H06.b1_A002 Phosphorous-defic... 119 2e-025
gb|CF428859.1|CF428859 PH1_18_H06.b1_A002 Phosphorous-defic... 119 2e-025
gb|CF433586.1|CF433586 NIT1_28_G07.b1_A002 Nitrogen-deficie... 119 2e-025
gb|CF434138.1|CF434138 NIT1_32_B06.b1_A002 Nitrogen-deficie... 119 2e-025
gb|CF480852.1|CF480852 POL1_68_G07.b1_A002 Pollen Sorghum b... 119 2e-025
gb|CF481656.1|CF481656 POL1_73_F06.b1_A002 Pollen Sorghum b... 119 2e-025
gb|CF489719.1|CF489719 POL1_59_F05.b1_A002 Pollen Sorghum b... 119 2e-025
gb|CF760068.1|CF760068 DSAF1_55_B03.b1_A011 Drought-stresse... 119 2e-025
gb|CN133292.1|CN133292 OX1_11_G06.b1_A002 Oxidatively-stres... 119 2e-025
gb|CN145285.1|CN145285 WOUND1_28_A04.b2_A002 Wounded leaves... 119 2e-025
gb|CN148100.1|CN148100 WOUND1_54_E06.b1_A002 Wounded leaves... 119 2e-025
gb|CX606476.1|CX606476 ANR1_3_F07.b1_A002 Anaerobic roots S... 119 2e-025
gb|CX606805.1|CX606805 ANR1_5_C04.b1_A002 Anaerobic roots S... 119 2e-025
gb|CX607355.1|CX607355 ANR1_8_D05.b1_A002 Anaerobic roots S... 119 2e-025
gb|CX608537.1|CX608537 ANR1_39_E03.b1_A002 Anaerobic roots ... 119 2e-025
gb|CX610976.1|CX610976 ANR1_22_A04.b1_A002 Anaerobic roots ... 119 2e-025
gb|CX610995.1|CX610995 ANR1_22_B12.b1_A002 Anaerobic roots ... 119 2e-025
gb|CX613816.1|CX613816 GABR1_10_H05.b1_A002 GA- or brassino... 119 2e-025
gb|CX614086.1|CX614086 GABR1_12_A09.b1_A002 GA- or brassino... 119 2e-025
gb|CX619871.1|CX619871 GABR1_48_G11.b1_A002 GA- or brassino... 119 2e-025
gb|CX620937.1|CX620937 GABR1_55_A11.b1_A002 GA- or brassino... 119 2e-025
gb|CX622168.1|CX622168 GABR1_62_H11.b2_A002 GA- or brassino... 119 2e-025
gb|BG241396.1|BG241396 RHIZ2_51_E02.g1_A003 Rhizome2 (RHIZ2... 115 4e-024
gb|CX610686.1|CX610686 ANR1_20_E11.b1_A002 Anaerobic roots ... 115 4e-024
gb|CW207638.1|CW207638 104_636_11188258_148_36970_033 Sorgh... 113 2e-023
gb|AW672200.1|AW672200 LG1_357_G06.g1_A002 Light Grown 1 (L... 111 6e-023
gb|BE357223.1|BE357223 DG1_147_B06.g1_A002 Dark Grown 1 (DG... 111 6e-023
gb|CD223430.1|CD223430 CCC1_28_A09.b1_A007 Callus culture/c... 111 6e-023
gb|CD226156.1|CD226156 CCC1_44_A10.b1_A007 Callus culture/c... 111 6e-023
gb|CD227533.1|CD227533 CCC1_52_H03.b1_A007 Callus culture/c... 111 6e-023
gb|CD234910.1|CD234910 SS1_19_B06.b1_A012 Salt-stressed see... 111 6e-023
gb|CN124493.1|CN124493 RHOH1_5_D08.b1_A002 Acid- and alkali... 111 6e-023
gb|CN131575.1|CN131575 OX1_1_C02.b1_A002 Oxidatively-stress... 111 6e-023
gb|CN143733.1|CN143733 WOUND1_18_C01.b1_A002 Wounded leaves... 111 6e-023
gb|CN145356.1|CN145356 WOUND1_28_A04.g1_A002 Wounded leaves... 111 6e-023
gb|CX607216.1|CX607216 ANR1_7_G11.b1_A002 Anaerobic roots S... 111 6e-023
gb|CX607660.1|CX607660 ANR1_30_B05.b1_A002 Anaerobic roots ... 111 6e-023
gb|CX609182.1|CX609182 ANR1_11_D09.b1_A002 Anaerobic roots ... 111 6e-023
gb|CX610484.1|CX610484 ANR1_19_B07.b1_A002 Anaerobic roots ... 111 6e-023
gb|CX611323.1|CX611323 ANR1_24_B02.b1_A002 Anaerobic roots ... 111 6e-023
gb|CX615589.1|CX615589 GABR1_21_C06.b1_A002 GA- or brassino... 111 6e-023
gb|CX619540.1|CX619540 GABR1_46_D06.b1_A002 GA- or brassino... 111 6e-023
gb|CX619834.1|CX619834 GABR1_48_D07.b1_A002 GA- or brassino... 111 6e-023
gb|BG102030.1|BG102030 RHIZ2_24_A04.g1_A003 Rhizome2 (RHIZ2... 107 9e-022
gb|BG559941.1|BG559941 RHIZ2_75_E11.g1_A003 Rhizome2 (RHIZ2... 107 9e-022
gb|BE362837.1|BE362837 DG1_89_E04.g2_A002 Dark Grown 1 (DG1... 105 4e-021
gb|BG052412.1|BG052412 RHIZ2_13_E02.g1_A003 Rhizome2 (RHIZ2... 105 4e-021
gb|BG102511.1|BG102511 RHIZ2_34_A04.g1_A003 Rhizome2 (RHIZ2... 105 4e-021
gb|BG465245.1|BG465245 EM1_73_G06.g1_A002 Embryo 1 (EM1) So... 105 4e-021
gb|BI351471.1|BI351471 IP1_72_B04.g1_A002 Immature pannicle... 105 4e-021
gb|AW563665.1|AW563665 LG1_245_G05.b1_A002 Light Grown 1 (L... 103 1e-020
gb|CD228862.1|CD228862 CCC1_10_C08.b1_A007 Callus culture/c... 103 1e-020
gb|CX617682.1|CX617682 GABR1_35_D09.b1_A002 GA- or brassino... 103 1e-020
gb|DN552481.1|DN552481 pSHR-L_D09_S003 pSHR Sorghum halepen... 96 4e-018
gb|AW282503.1|AW282503 LG1_312_H05.g1_A002 Light Grown 1 (L... 88 9e-016
gb|CD427520.1|CD427520 SA1_37_E07.b1_A002 Salicylic acid-tr... 88 9e-016
gb|CX616858.1|CX616858 GABR1_30_G12.b1_A002 GA- or brassino... 88 9e-016
gb|CW453811.1|CW453811 fsbb001f197p15f0 Sorghum methylation... 84 1e-014
gb|CD462151.1|CD462151 SA1_39_D04.g1_A002 Salicylic acid-tr... 84 1e-014
gb|CF428416.1|CF428416 PH1_15_D05.b1_A002 Phosphorous-defic... 84 1e-014
gb|CD222470.1|CD222470 CCC1_22_B12.b1_A007 Callus culture/c... 82 5e-014
gb|BG487847.1|BG487847 RHIZ2_60_B02.g1_A003 Rhizome2 (RHIZ2... 80 2e-013
gb|BG947525.1|BG947525 IP1_5_E08.g1_A002 Immature pannicle ... 80 2e-013
gb|BI075545.1|BI075545 IP1_21_H04.g1_A002 Immature pannicle... 80 2e-013
gb|BI099378.1|BI099378 IP1_41_D03.g1_A002 Immature pannicle... 80 2e-013
gb|BG558122.1|BG558122 RHIZ2_67_B03.g1_A003 Rhizome2 (RHIZ2... 76 3e-012
gb|BI211606.1|BI211606 IP1_59_F06.g1_A002 Immature pannicle... 76 3e-012
gb|BI212012.1|BI212012 IP1_63_D02.g1_A002 Immature pannicle... 76 3e-012
gb|CD424361.1|CD424361 SA1_5_G02.b1_A002 Salicylic acid-tre... 76 3e-012
gb|CF427548.1|CF427548 PH1_16_E12.b1_A002 Phosphorous-defic... 76 3e-012
gb|BE358570.1|BE358570 DG1_31_E07.g1_A002 Dark Grown 1 (DG1... 74 1e-011
gb|BE601241.1|BE601241 PI1_90_F06.g1_A002 Pathogen induced ... 74 1e-011
gb|BI074994.1|BI074994 IP1_18_F08.g1_A002 Immature pannicle... 74 1e-011
gb|BI075032.1|BI075032 IP1_20_H05.g1_A002 Immature pannicle... 74 1e-011
gb|CX622141.1|CX622141 GABR1_62_F06.b2_A002 GA- or brassino... 66 3e-009
gb|AW564454.1|AW564454 LG1_295_C04.b1_A002 Light Grown 1 (L... 60 2e-007
gb|BF586584.1|BF586584 FM1_29_A11.b1_A003 Floral-Induced Me... 58 8e-007
gb|CD229464.1|CD229464 CCC1_16_C05.b1_A007 Callus culture/c... 58 8e-007
gb|AW923869.1|AW923869 WS1_30_A07.b1_A002 Water-stressed 1 ... 56 3e-006
gb|BI075077.1|BI075077 IP1_20_C09.g1_A002 Immature pannicle... 54 1e-005
gb|BG558054.1|BG558054 RHIZ2_66_A08.g1_A003 Rhizome2 (RHIZ2... 46 0.003
gb|BI075081.1|BI075081 IP1_20_D01.g1_A002 Immature pannicle... 46 0.003
gb|CW369508.1|CW369508 fsbb001f043p02k0 Sorghum methylation... 40 0.18
gb|CW416189.1|CW416189 fsbb001f116k01f0 Sorghum methylation... 40 0.18
gb|CW433208.1|CW433208 fsbb001f148f07k0 Sorghum methylation... 40 0.18
>gb|CF484290.1|CF484290 POL1_4_G12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_4_G12_A002 3', mRNA sequence
Length = 614
Score = 410 bits (207), Expect = e-113
Identities = 230/238 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 309
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 308 tggcgtagacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 249
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 189
Query: 428 attcgtcccactcggcgaggatgcagacggcgtgcgcgtcgcgcgcggcctcgtaggc 485
| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 188 actcgtcccactcggtgaggatgcagacggcgtgcgcgtcgcgcgccgcctcgtaggc 131
>gb|CF485401.1|CF485401 POL1_31_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_31_G03_A002 3', mRNA sequence
Length = 521
Score = 402 bits (203), Expect = e-110
Identities = 229/238 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcgatgggtcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 261
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 260 tggcgtagacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 201
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 141
Query: 428 attcgtcccactcggcgaggatgcagacggcgtgcgcgtcgcgcgcggcctcgtaggc 485
| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 140 actcgtcccactcggtgaggatgcagacggcgtgcgcgtcgcgcgccgcctcgtaggc 83
>gb|CW057869.1|CW057869 104_300_10518446_1_30040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518446, DNA
sequence
Length = 646
Score = 391 bits (197), Expect = e-107
Identities = 217/224 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 165
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 164 tggcgtagacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 105
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 45
Query: 428 attcgtcccactcggcgaggatgcagacggcgtgcgcgtcgcgc 471
| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 44 actcgtcccactcggtgaggatgcagacggcgtgcgcgtcgcgc 1
>gb|CW057963.1|CW057963 104_300_10518494_1_30028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518494, DNA
sequence
Length = 643
Score = 391 bits (197), Expect = e-107
Identities = 217/224 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 165
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 164 tggcgtagacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 105
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 45
Query: 428 attcgtcccactcggcgaggatgcagacggcgtgcgcgtcgcgc 471
| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 44 actcgtcccactcggtgaggatgcagacggcgtgcgcgtcgcgc 1
>gb|CF486717.1|CF486717 POL1_39_G12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_G12_A002 3', mRNA sequence
Length = 420
Score = 351 bits (177), Expect = 4e-095
Identities = 197/204 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 145
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 144 tggcgtagacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 85
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 25
Query: 428 attcgtcccactcggcgaggatgc 451
| ||||||||||||| ||||||||
Sbjct: 24 actcgtcccactcggtgaggatgc 1
>gb|BZ625779.1|BZ625779 ih40f11.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih40f11 5', DNA sequence
Length = 376
Score = 347 bits (175), Expect = 6e-094
Identities = 213/226 (94%)
Strand = Plus / Plus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 207
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||| |||||||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct: 208 tggcgtacacgacgaagccgatctcccggagcttggaggggtcgacgacgttccggccgt 267
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 268 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgccctga 327
Query: 428 attcgtcccactcggcgaggatgcagacggcgtgcgcgtcgcgcgc 473
| ||||||||||| | ||||||||| |||||| |||||||||||||
Sbjct: 328 actcgtcccactccgtgaggatgcacacggcgagcgcgtcgcgcgc 373
>gb|CF485217.1|CF485217 POL1_30_D08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_D08_A002 3', mRNA sequence
Length = 462
Score = 341 bits (172), Expect = 4e-092
Identities = 195/203 (96%)
Strand = Plus / Minus
Query: 248 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gatcgatggatcacgcgacggctggcatgtccttgagccaatcgtcgagcggcttgccga 144
Query: 308 tagcgtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgt 367
| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 143 tggcgtaaacgacgaagccgatctcccggagcttggcggggtcgacgacgttccggccgt 84
Query: 368 cgaagatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 427
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 cgaagatgaacgccggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctga 24
Query: 428 attcgtcccactcggcgaggatg 450
| ||||||||||||| |||||||
Sbjct: 23 actcgtcccactcggtgaggatg 1
>gb|CW173472.1|CW173472 104_585_11156865_148_36555_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156865, DNA
sequence
Length = 506
Score = 182 bits (92), Expect = 2e-044
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaactcgtcccactcg 63
Query: 442 gcgaggatgcagacggcgtgcgcgtcgcgcgcggcctcgtaggc 485
| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 64 gtgaggatgcagacggcgtgcgcgtcgcgcgccgcctcgtaggc 107
>gb|BG051603.1|BG051603 FM1_58_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 442
Score = 127 bits (64), Expect = 1e-027
Identities = 159/191 (83%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| |||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 307 gcgaccgcgggcatgtccttaagccaagcgtcgaggggcttgccgatggagtagacgatg 248
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 247 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 188
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 187 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 128
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 127 gtcaggatgca 117
>gb|CF428262.1|CF428262 PH1_14_E03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_14_E03_A002 3', mRNA sequence
Length = 619
Score = 127 bits (64), Expect = 1e-027
Identities = 159/191 (83%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||||||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 273 gcgaccgcgggcatgtccttgagccaggcgtcgaggggcttgccgatggagtagacgatg 214
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 213 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 154
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 153 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 94
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 93 gtcaggatgca 83
>gb|CX606143.1|CX606143 ANR1_1_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_H06_A002 3', mRNA sequence
Length = 744
Score = 127 bits (64), Expect = 1e-027
Identities = 159/191 (83%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 445 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 386
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | ||||||||||||||||| ||||||
Sbjct: 385 aagccgatctccctcagcttctcggggtcgacaatgttgcggccgtcgaagacgaaggca 326
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 325 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 266
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 265 gtcaggatgca 255
>gb|CW022942.1|CW022942 104_162_10432148_1_30008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432148, DNA
sequence
Length = 543
Score = 125 bits (63), Expect = 4e-027
Identities = 143/170 (84%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
|||||| | |||||||| |||| ||||||||||||| | |||||||||||||||||||
Sbjct: 157 ggcatgccattgagccaggcgtccagcggcttgccgacggagtagacgacgaagccgatc 216
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||| ||| |||||||||||||||||||||||||| ||| || ||| | |
Sbjct: 217 tccctgagctccccggcgtcgacgacgttgcggccgtcgaagacgaacgccggcctcatc 276
Query: 391 atggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactc 440
||| ||||||||| || |||||||||||||||||| |||||||||||
Sbjct: 277 atgccgtcgaacacccggcggtagtcgagcgtcctgaactcgtcccactc 326
>gb|CW044141.1|CW044141 104_280_10508784_115_30241 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508784, DNA
sequence
Length = 373
Score = 125 bits (63), Expect = 4e-027
Identities = 143/170 (84%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
|||||| | |||||||| |||| ||||||||||||| | |||||||||||||||||||
Sbjct: 33 ggcatgccattgagccaggcgtccagcggcttgccgacggagtagacgacgaagccgatc 92
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||| ||| |||||||||||||||||||||||||| ||| || ||| | |
Sbjct: 93 tccctgagctccccggcgtcgacgacgttgcggccgtcgaagacgaacgccggcctcatc 152
Query: 391 atggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactc 440
||| ||||||||| || |||||||||||||||||| |||||||||||
Sbjct: 153 atgccgtcgaacacccggcggtagtcgagcgtcctgaactcgtcccactc 202
>gb|CW041247.1|CW041247 104_274_10506462_114_30468 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 574
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 489 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 430
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 429 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 370
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 369 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 310
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 309 gtcaggatgca 299
>gb|CW041248.1|CW041248 104_274_10506462_116_30432 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 661
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 328 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 387
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 388 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 447
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 448 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 507
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 508 gtcaggatgca 518
>gb|CW041249.1|CW041249 104_274_10506462_116_30480 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 667
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 328 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 387
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 388 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 447
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 448 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 507
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 508 gtcaggatgca 518
>gb|CW441621.1|CW441621 fsbb001f160n21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160n21, DNA
sequence
Length = 666
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 171 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 230
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 231 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 290
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 291 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 350
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 351 gtcaggatgca 361
>gb|AW565625.1|AW565625 LG1_347_B05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 303 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 244
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 243 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 184
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 183 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 124
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 123 gtcaggatgca 113
>gb|AW672110.1|AW672110 LG1_357_G06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 337 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 278
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 277 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 218
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 217 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 158
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 157 gtcaggatgca 147
>gb|AW679715.1|AW679715 WS1_30_A07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 668
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 359 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 300
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 299 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 240
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 239 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 180
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 179 gtcaggatgca 169
>gb|BE356388.1|BE356388 DG1_124_E09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 317 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 258
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 257 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 198
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 197 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 138
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 137 gtcaggatgca 127
>gb|BE356515.1|BE356515 DG1_125_E11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 299 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 240
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 239 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 180
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 179 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 120
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 119 gtcaggatgca 109
>gb|BE358022.1|BE358022 DG1_23_B01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 316 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 257
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 256 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 197
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 196 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 137
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 136 gtcaggatgca 126
>gb|BE358177.1|BE358177 DG1_24_A11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 510
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 295 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 236
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 235 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 176
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 175 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 116
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 115 gtcaggatgca 105
>gb|BE358423.1|BE358423 DG1_29_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 326 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 267
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 266 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 207
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 206 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 147
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 146 gtcaggatgca 136
>gb|BE358654.1|BE358654 DG1_30_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 443 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 384
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 383 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 324
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 323 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 264
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 263 gtcaggatgca 253
>gb|BE366419.1|BE366419 PI1_33_C11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 720
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 430 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 371
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 370 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 311
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 310 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 251
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 250 gtcaggatgca 240
>gb|BE593863.1|BE593863 WS1_103_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 604
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 480 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 421
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 420 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 361
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 360 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 301
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 300 gtcaggatgca 290
>gb|BE594909.1|BE594909 PI1_47_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 621
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 345 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 286
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 285 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 226
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 225 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 166
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 165 gtcaggatgca 155
>gb|BF480986.1|BF480986 FM1_15_H10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 650
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 399 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 340
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 339 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 280
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 279 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 220
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 219 gtcaggatgca 209
>gb|BF586505.1|BF586505 FM1_29_A11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 600
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 308 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 249
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 248 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 189
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 188 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 129
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 128 gtcaggatgca 118
>gb|BF587993.1|BF587993 FM1_35_D06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 537
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 258 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 199
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 198 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 139
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 138 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 79
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 78 gtcaggatgca 68
>gb|BF705335.1|BF705335 RHIZ2_3_G04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 486
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 241 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 182
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 181 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 122
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 121 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 62
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 61 gtcaggatgca 51
>gb|BG102056.1|BG102056 RHIZ2_24_C09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 625
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 315 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 256
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 255 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 196
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 195 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 136
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 135 gtcaggatgca 125
>gb|BG102550.1|BG102550 RHIZ2_34_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 440
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 305 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 246
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 245 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 186
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 185 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 126
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 125 gtcaggatgca 115
>gb|BG239905.1|BG239905 OV1_30_E05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 212 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 153
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 152 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 93
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 92 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 33
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 32 gtcaggatgca 22
>gb|BG273377.1|BG273377 OV2_28_H10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 293 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 234
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 233 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 174
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 173 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 114
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 113 gtcaggatgca 103
>gb|BG356319.1|BG356319 EM1_21_A11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 666
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 344 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 285
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 284 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 225
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 224 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 165
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 164 gtcaggatgca 154
>gb|BG487841.1|BG487841 RHIZ2_60_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 562
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 226 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 167
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 166 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 107
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 106 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 47
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 46 gtcaggatgca 36
>gb|BG488041.1|BG488041 RHIZ2_62_E05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 612
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 301 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 242
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 241 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 182
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 181 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 122
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 121 gtcaggatgca 111
>gb|BG557601.1|BG557601 EM1_53_G10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 302 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 243
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 242 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 183
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 182 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 123
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 122 gtcaggatgca 112
>gb|BG559680.1|BG559680 RHIZ2_72_E06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 576
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 266 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 207
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 206 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 147
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 146 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 87
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 86 gtcaggatgca 76
>gb|BG559827.1|BG559827 RHIZ2_74_B04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 590
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 254 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 195
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 194 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 135
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 134 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 75
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 74 gtcaggatgca 64
>gb|BI074277.1|BI074277 IP1_13_F03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 685
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 319 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 260
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 259 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 200
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 199 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 140
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 139 gtcaggatgca 129
>gb|BI076306.1|BI076306 IP1_25_E08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 554
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 244 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 185
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 184 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 125
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 124 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 65
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 64 gtcaggatgca 54
>gb|BI098045.1|BI098045 IP1_31_D03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 258 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 199
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 198 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 139
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 138 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 79
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 78 gtcaggatgca 68
>gb|BM327844.1|BM327844 PIC1_18_B12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 584
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 276 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 217
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 216 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 157
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 156 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 97
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 96 gtcaggatgca 86
>gb|CD219947.1|CD219947 CCC1_60_H06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_H06_A007 3', mRNA sequence
Length = 645
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 316 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 257
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 256 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 197
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 196 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 137
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 136 gtcaggatgca 126
>gb|CD222142.1|CD222142 CCC1_2_D07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D07_A007 3', mRNA sequence
Length = 623
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 319 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 260
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 259 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 200
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 199 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 140
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 139 gtcaggatgca 129
>gb|CD222334.1|CD222334 CCC1_21_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F04_A007 3', mRNA sequence
Length = 662
Score = 119 bits (60), Expect = 2e-025
Identities = 158/191 (82%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
||||| || ||||||||||| ||||| ||||||| ||||||||||| | |||||||| |
Sbjct: 330 gcgaccgcgggcatgtccttaagccaggcgtcgaggggcttgccgatggagtagacgatg 271
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| ||||| ||| |||||| | |||||| |||||||||| ||||||
Sbjct: 270 aagccgatctccctcagcttctcggggtcgacaatgttgcgaccgtcgaagacgaaggca 211
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || || |||||| || ||| |||| ||||||||||||
Sbjct: 210 ggcttctgcatgttgtcgaagatcttctggtagtccagggtcttgaactcgtcccactcg 151
Query: 442 gcgaggatgca 452
| ||||||||
Sbjct: 150 gtcaggatgca 140
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 141,375
Number of Sequences: 832831
Number of extensions: 141375
Number of successful extensions: 39735
Number of sequences better than 0.5: 144
Number of HSP's better than 0.5 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39553
Number of HSP's gapped (non-prelim): 167
length of query: 487
length of database: 491,359,669
effective HSP length: 19
effective length of query: 468
effective length of database: 475,535,880
effective search space: 222550791840
effective search space used: 222550791840
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)