BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696657.2.1
(1531 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 827 0.0
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 745 0.0
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 735 0.0
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 718 0.0
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 696 0.0
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 652 0.0
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 539 e-151
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 480 e-133
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 466 e-129
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 446 e-123
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 369 e-100
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 301 1e-079
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 285 6e-075
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 285 6e-075
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 285 6e-075
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 278 1e-072
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 266 6e-069
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 262 9e-068
gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sor... 202 7e-050
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 196 4e-048
gb|CF483069.1|CF483069 POL1_11_C05.b1_A002 Pollen Sorghum b... 178 1e-042
gb|BG239969.1|BG239969 OV1_31_D01.g1_A002 Ovary 1 (OV1) Sor... 176 4e-042
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 98 3e-018
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 98 3e-018
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 98 3e-018
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 98 3e-018
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 98 3e-018
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 98 3e-018
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 82 2e-013
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 82 2e-013
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 78 3e-012
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 72 2e-010
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 72 2e-010
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 72 2e-010
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 72 2e-010
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 72 2e-010
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 72 2e-010
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 72 2e-010
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 70 7e-010
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 70 7e-010
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 64 4e-008
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 62 2e-007
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 62 2e-007
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 62 2e-007
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 60 6e-007
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 60 6e-007
gb|CW279013.1|CW279013 104_753_11406855_116_35427_054 Sorgh... 60 6e-007
gb|CW279015.1|CW279015 104_753_11406856_116_35428_054 Sorgh... 60 6e-007
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 60 6e-007
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 60 6e-007
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 60 6e-007
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF482113.1|CF482113 POL1_76_F02.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 60 6e-007
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 58 3e-006
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 58 3e-006
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 58 3e-006
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 58 3e-006
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 58 3e-006
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 58 3e-006
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 58 3e-006
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 58 3e-006
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 54 4e-005
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 54 4e-005
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 54 4e-005
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 54 4e-005
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 54 4e-005
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 54 4e-005
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 54 4e-005
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 54 4e-005
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 54 4e-005
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 52 2e-004
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 52 2e-004
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 52 2e-004
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 50 6e-004
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 50 6e-004
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 50 6e-004
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 50 6e-004
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 50 6e-004
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 50 6e-004
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 50 6e-004
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 48 0.002
gb|CW197884.1|CW197884 104_622_11181920_116_36832_026 Sorgh... 48 0.002
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 48 0.002
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 48 0.002
gb|CW369157.1|CW369157 fsbb001f043h04f0 Sorghum methylation... 48 0.002
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 48 0.002
gb|BF587798.1|BF587798 FM1_40_F09.g1_A003 Floral-Induced Me... 48 0.002
gb|BG048519.1|BG048519 OV1_14_E10.g2_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG048591.1|BG048591 OV1_14_E10.b1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF481314.1|CF481314 POL1_71_F02.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF481907.1|CF481907 POL1_75_C02.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF484442.1|CF484442 POL1_25_H01.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF488327.1|CF488327 POL1_49_E07.b1_A002 Pollen Sorghum b... 48 0.002
gb|CF488802.1|CF488802 POL1_52_G02.b1_A002 Pollen Sorghum b... 48 0.002
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 46 0.010
gb|CW050592.1|CW050592 104_290_10514748_115_30205 Sorghum m... 44 0.038
gb|CW054380.1|CW054380 104_295_10516495_114_30181 Sorghum m... 44 0.038
gb|CW069628.1|CW069628 104_319_10526002_5_30099 Sorghum met... 44 0.038
gb|CW271206.1|CW271206 104_743_11402872_148_35345_060 Sorgh... 44 0.038
gb|CW328958.1|CW328958 104_825_11479582_148_36001_091 Sorgh... 44 0.038
gb|CW437137.1|CW437137 fsbb001f154b16f0 Sorghum methylation... 44 0.038
gb|CL700892.2|CL700892 SP__Ba0066I03.f SP__Ba Sorghum propi... 44 0.038
gb|BM326952.1|BM326952 PIC1_5_B10.g1_A002 Pathogen-infected... 44 0.038
gb|CX612717.1|CX612717 GABR1_4_C05.b1_A002 GA- or brassinol... 44 0.038
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 42 0.15
gb|CL174422.1|CL174422 104_378_10891612_116_31771_364 Sorgh... 42 0.15
gb|CW025426.1|CW025426 104_227_10488188_116_30504 Sorghum m... 42 0.15
gb|CW067644.1|CW067644 104_315_10524410_115_30125 Sorghum m... 42 0.15
gb|CW071325.1|CW071325 104_323_10591474_114_30474 Sorghum m... 42 0.15
gb|CW176479.1|CW176479 104_589_11158509_116_36586_089 Sorgh... 42 0.15
gb|CW179407.1|CW179407 104_593_11160083_148_36629_040 Sorgh... 42 0.15
gb|CW233308.1|CW233308 104_686_11213332_116_37372_008 Sorgh... 42 0.15
gb|CW323758.1|CW323758 104_818_11476800_116_35905_096 Sorgh... 42 0.15
gb|CW328718.1|CW328718 104_825_11479460_116_36003_080 Sorgh... 42 0.15
gb|CW345745.1|CW345745 104_849_11488663_116_36213_032 Sorgh... 42 0.15
gb|CW345746.1|CW345746 104_849_11488663_148_36214_032 Sorgh... 42 0.15
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 42 0.15
gb|CW405409.1|CW405409 fsbb001f097p05f0 Sorghum methylation... 42 0.15
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 827 bits (417), Expect = 0.0
Identities = 636/709 (89%)
Strand = Plus / Plus
Query: 290 cccttggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgccggcg 349
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 4 cccttggcggtgcccttggcgttgctgcacacggccatggtcttgttgttcttgccggcg 63
Query: 350 tactccacgttgacatcgatgagggagacgccgctgcatggctgcgtctccgagcagagc 409
||||||||||| ||||||||||| || ||||||||||||||||| | || ||||||||||
Sbjct: 64 tactccacgtttacatcgatgagcgacacgccgctgcatggctgtgactgcgagcagagc 123
Query: 410 aggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtgacgtccttg 469
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 124 aggctgatggcctgtggcgtggacgacgtgcccgtgatgttgcggaacgtgacgtccttg 183
Query: 470 acggagacatgcgaggagttgctccgcttgccagggcataccttctgcgggcagaagtac 529
||| |||||| ||||||| |||| |||||| ||||| ||||||| ||||||||||||
Sbjct: 184 acgatgacatgagaggagtcgctcttcttgccggggcacaccttctcggggcagaagtac 243
Query: 530 tggtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatgg 589
|||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 244 tggtcgatgatgatggggttcgccacctcctccatcctgatgttctcgaaggtcagatgc 303
Query: 590 gaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtg 649
|| ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 304 gacgccgtcagcacagactcggcgtcctcgtacgacttgatgcgcacgccgttagtggtc 363
Query: 650 ttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcgg 709
|||||||||||||||| ||||||||| | |||| ||||||||||||| ||||||||||||
Sbjct: 364 ttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtccttctcatccttgtagcgg 423
Query: 710 cctaggcagccgacgctgatgccctgcccggggccgcaggtgatgctgtccaccaagacg 769
||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||| ||||
Sbjct: 424 cctaggcagccgatgctgatgccctgcccggggccgcagatgatgttgttcaccatgacg 483
Query: 770 ccgttgcacccgggcccaatcgagacgcagtcgtcgccggtgccgatggtcgagttgagg 829
|||| || |||||| |||| |||| |||||||||||| ||||||||||| |||||| |
Sbjct: 484 ccgtcgctcccggggccaacagagatgcagtcgtcgccagtgccgatggttgagttggtg 543
Query: 830 atgctgatcttggaggagcctccgacgtggacgccgtccgtgttctcaacgtcggcgggc 889
||||| | ||||| ||| ||| || |||||||||||||||||||||||||| | |||
Sbjct: 544 atgctcaccttggtggacattccaacatggacgccgtccgtgttctcaacgtccccaggc 603
Query: 890 gcggtgacgttcacgtccttcacggtgatgctctctgagttgtcgatgttgatgtggaag 949
||||||| ||||||||||||||| |||||| ||| ||| |||||| ||||||||||||
Sbjct: 604 gcggtgatgttcacgtccttcaccgtgatgttctttgaagcgtcgatattgatgtggaag 663
Query: 950 aacttggagttgagtagtttgattccggcgacagtggcgttgatcacgt 998
|||||||||||||||||||||||||| | ||||||| ||||| ||||||
Sbjct: 664 aacttggagttgagtagtttgattccagagacagtgccgttggtcacgt 712
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 745 bits (376), Expect = 0.0
Identities = 571/636 (89%)
Strand = Plus / Plus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 76 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 135
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 136 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 195
Query: 392 tgcgtctccgagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttg 451
|| | || ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 196 tgtgactgcgagcagagcaggctgatggcctgtggcgtggacgacgtgcccgtgatgttg 255
Query: 452 cggaacgtgacgtccttgacggagacatgcgaggagttgctccgcttgccagggcatacc 511
||||||||||||||||||||| |||||| ||||||| |||| |||||| ||||| |||
Sbjct: 256 cggaacgtgacgtccttgacgatgacatgagaggagtcgctcttcttgccggggcacacc 315
Query: 512 ttctgcgggcagaagtactggtcgatgacgatggggttggccacctcctccatcctgatg 571
|||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 316 ttctcggggcagaagtactggtcgatgatgatggggttcgccacctcctccatcctgatg 375
Query: 572 ttctcgaaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgacttgatg 631
||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 376 ttctcgaaggtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgacttgatg 435
Query: 632 cgcacgccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcacgtcc 691
||||||||||| ||||| |||||||||||||||| ||||||||| | |||| ||||||||
Sbjct: 436 cgcacgccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtcc 495
Query: 692 ttctcgtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccgcaggtg 751
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 496 ttctcatccttgtagcggcctaggcagccgatgctgatgccctgcccggggccgcagatg 555
Query: 752 atgctgtccaccaagacgccgttgcacccgggcccaatcgagacgcagtcgtcgccggtg 811
||| ||| ||||| |||||||| || |||||| |||| |||| |||||||||||| |||
Sbjct: 556 atgttgttcaccatgacgccgtcgctcccggggccaacagagatgcagtcgtcgccagtg 615
Query: 812 ccgatggtcgagttgaggatgctgatcttggaggagcctccgacgtggacgccgtccgtg 871
|||||||| |||||| |||||| | ||||| ||| ||| || |||||||||||||||
Sbjct: 616 ccgatggttgagttggtgatgctcaccttggtggacattccaacatggacgccgtccgtg 675
Query: 872 ttctcaacgtcggcgggcgcggtgacgttcacgtcc 907
||||||||||| | |||||||||| ||||||||||
Sbjct: 676 ttctcaacgtccccaggcgcggtgatgttcacgtcc 711
>gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 660
Score = 735 bits (371), Expect = 0.0
Identities = 578/647 (89%)
Strand = Plus / Minus
Query: 338 ttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggctgcgtc 397
||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| | |
Sbjct: 647 ttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggctgtgac 588
Query: 398 tccgagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaac 457
| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 587 tgcgagcagagcaggctgatggcctgtggcgtggacgacgtgcccgtgatgttgcggaac 528
Query: 458 gtgacgtccttgacggagacatgcgaggagttgctccgcttgccagggcataccttctgc 517
||||||||||||||| |||||| ||||||| |||| |||||| ||||| |||||||
Sbjct: 527 gtgacgtccttgacgatgacatgagaggagtcgctcttcttgccggggcacaccttctcg 468
Query: 518 gggcagaagtactggtcgatgacgatggggttggccacctcctccatcctgatgttctcg 577
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 467 gggcagaagtactggtcgatgatgatggggttcgccacctcctccatcctgatgttctcg 408
Query: 578 aaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacg 637
||||| ||||| || ||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 407 aaggtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgacttgatgcgcacg 348
Query: 638 ccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcg 697
||||| ||||| |||||||||||||||| ||||||||| | |||| |||||||||||||
Sbjct: 347 ccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtccttctca 288
Query: 698 tccttgtagcggcctaggcagccgacgctgatgccctgcccggggccgcaggtgatgctg 757
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||
Sbjct: 287 tccttgtagcggcctaggcagccgatgctgatgccctgcccggggccgcagatgatgttg 228
Query: 758 tccaccaagacgccgttgcacccgggcccaatcgagacgcagtcgtcgccggtgccgatg 817
| ||||| |||||||| || |||||| |||| |||| |||||||||||| |||||||||
Sbjct: 227 ttcaccatgacgccgtcgctcccggggccaacagagatgcagtcgtcgccagtgccgatg 168
Query: 818 gtcgagttgaggatgctgatcttggaggagcctccgacgtggacgccgtccgtgttctca 877
|| |||||| |||||| | ||||| ||| ||| || |||||||||||||||||||||
Sbjct: 167 gttgagttggtgatgctcaccttggtggacattccaacatggacgccgtccgtgttctca 108
Query: 878 acgtcggcgggcgcggtgacgttcacgtccttcacggtgatgctctctgagttgtcgatg 937
||||| | |||||||||| ||||||||||||||| |||||| ||| ||| ||||||
Sbjct: 107 acgtccccaggcgcggtgatgttcacgtccttcaccgtgatgttctttgaagcgtcgata 48
Query: 938 ttgatgtggaagaacttggagttgagtagtttgattccggcgacagt 984
|||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 47 ttgatgtggaagaacttggagttgagtagtttgattccagagacagt 1
>gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227944, DNA
sequence
Length = 663
Score = 718 bits (362), Expect = 0.0
Identities = 581/654 (88%)
Strand = Plus / Minus
Query: 357 cgttgacatcgatgagggagacgccgctgcatggctgcgtctccgagcagagcaggctga 416
|||| ||||||||||| || ||||||||||||||||| | || |||||||||||||||||
Sbjct: 663 cgtttacatcgatgagcgacacgccgctgcatggctgtgactgcgagcagagcaggctga 604
Query: 417 tggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtgacgtccttgacggaga 476
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 603 tggcctgtggcgtggacgacgtgcccgtgatgttgcggaacgtgacgtccttgacgatga 544
Query: 477 catgcgaggagttgctccgcttgccagggcataccttctgcgggcagaagtactggtcga 536
|||| ||||||| |||| |||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 543 catgagaggagtcgctcttcttgccggggcacaccttctcggggcagaagtactggtcga 484
Query: 537 tgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatgggaggccg 596
||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 483 tgatgatggggttcgccacctcctccatcctgatgttctcgaaggtcagatgcgacgccg 424
Query: 597 tcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgttcttga 656
||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 423 tcagcacagactcggcgtcctcgtacgacttgatgcgcacgccgttagtggtcttcttga 364
Query: 657 gcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcctaggc 716
||||||||| ||||||||| | |||| ||||||||||||| |||||||||||||||||||
Sbjct: 363 gcacgcagtcccgcaccgtcacgtcggtcacgtccttctcatccttgtagcggcctaggc 304
Query: 717 agccgacgctgatgccctgcccggggccgcaggtgatgctgtccaccaagacgccgttgc 776
|||||| ||||||||||||||||||||||||| ||||| ||| ||||| |||||||| ||
Sbjct: 303 agccgatgctgatgccctgcccggggccgcagatgatgttgttcaccatgacgccgtcgc 244
Query: 777 acccgggcccaatcgagacgcagtcgtcgccggtgccgatggtcgagttgaggatgctga 836
|||||| |||| |||| |||||||||||| ||||||||||| |||||| |||||| |
Sbjct: 243 tcccggggccaacagagatgcagtcgtcgccagtgccgatggttgagttggtgatgctca 184
Query: 837 tcttggaggagcctccgacgtggacgccgtccgtgttctcaacgtcggcgggcgcggtga 896
||||| ||| ||| || |||||||||||||||||||||||||| | ||||||||||
Sbjct: 183 ccttggtggacattccaacatggacgccgtccgtgttctcaacgtccccaggcgcggtga 124
Query: 897 cgttcacgtccttcacggtgatgctctctgagttgtcgatgttgatgtggaagaacttgg 956
||||||||||||||| |||||| ||| ||| |||||| |||||||||||||||||||
Sbjct: 123 tgttcacgtccttcaccgtgatgttctttgaagcgtcgatattgatgtggaagaacttgg 64
Query: 957 agttgagtagtttgattccggcgacagtggcgttgatcacgtgaaacagcacca 1010
||||||||||||||||||| | ||||||| ||||| |||||| ||||||||||
Sbjct: 63 agttgagtagtttgattccagagacagtgccgttggtcacgtagaacagcacca 10
>gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 752
Score = 696 bits (351), Expect = 0.0
Identities = 571/643 (88%), Gaps = 1/643 (0%)
Strand = Plus / Minus
Query: 368 atgagggagacgccgctgcatggctgcgtctccgagcagagcaggctgatggcctcgggc 427
||||| || ||||||||||||||||| | || ||||||||||||||||||||||| | ||
Sbjct: 752 atgagcgacacgccgctgcatggctgtgactgcgagcagagcaggctgatggcct-gtgc 694
Query: 428 gtggacgacgtgccggtgatgttgcggaacgtgacgtccttgacggagacatgcgaggag 487
|||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 693 gtggacgacgtgcccgtgatgttgcggaacgtgacgtccttgacgatgacatgagaggag 634
Query: 488 ttgctccgcttgccagggcataccttctgcgggcagaagtactggtcgatgacgatgggg 547
| |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||
Sbjct: 633 tcgctcttcttgccggggcacaccttctcggggcagaagtactggtcgatgatgatgggg 574
Query: 548 ttggccacctcctccatcctgatgttctcgaaggtgagatgggaggccgtcagcacggac 607
|| |||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 573 ttcgccacctcctccatcctgatgttctcgaaggtcagatgcgacgccgtcagcacagac 514
Query: 608 tcggcgtccacgtacgacttgatgcgcacgccgttggtggtgttcttgagcacgcagttc 667
||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 513 tcggcgtcctcgtacgacttgatgcgcacgccgttagtggtcttcttgagcacgcagtcc 454
Query: 668 cgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcctaggcagccgacgctg 727
|||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 453 cgcaccgtcacgtcggtcacgtccttctcatccttgtagcggcctaggcagccgatgctg 394
Query: 728 atgccctgcccggggccgcaggtgatgctgtccaccaagacgccgttgcacccgggccca 787
||||||||||||||||||||| ||||| ||| ||||| |||||||| || |||||| |||
Sbjct: 393 atgccctgcccggggccgcagatgatgttgttcaccatgacgccgtcgctcccggggcca 334
Query: 788 atcgagacgcagtcgtcgccggtgccgatggtcgagttgaggatgctgatcttggaggag 847
| |||| |||||||||||| ||||||||||| |||||| |||||| | ||||| |||
Sbjct: 333 acagagatgcagtcgtcgccagtgccgatggttgagttggtgatgctcaccttggtggac 274
Query: 848 cctccgacgtggacgccgtccgtgttctcaacgtcggcgggcgcggtgacgttcacgtcc 907
||| || |||||||||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 273 attccaacatggacgccgtccgtgttctcaacgtccccaggcgcggtgatgttcacgtcc 214
Query: 908 ttcacggtgatgctctctgagttgtcgatgttgatgtggaagaacttggagttgagtagt 967
||||| |||||| ||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 213 ttcaccgtgatgttctttgaagcgtcgatattgatgtggaagaacttggagttgagtagt 154
Query: 968 ttgattccggcgacagtggcgttgatcacgtgaaacagcacca 1010
|||||||| | ||||||| ||||| |||||| ||||||||||
Sbjct: 153 ttgattccagagacagtgccgttggtcacgtagaacagcacca 111
>gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100a22, DNA
sequence
Length = 532
Score = 652 bits (329), Expect = 0.0
Identities = 470/517 (90%)
Strand = Plus / Plus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 67
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 68 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 127
Query: 392 tgcgtctccgagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttg 451
|| | || ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 128 tgtgactgcgagcagagcaggctgatggcctgtggcgtggacgacgtgcccgtgatgttg 187
Query: 452 cggaacgtgacgtccttgacggagacatgcgaggagttgctccgcttgccagggcatacc 511
||||||||||||||||||||| |||||| ||||||| |||| |||||| ||||| |||
Sbjct: 188 cggaacgtgacgtccttgacgatgacatgagaggagtcgctcttcttgccggggcacacc 247
Query: 512 ttctgcgggcagaagtactggtcgatgacgatggggttggccacctcctccatcctgatg 571
|||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 248 ttctcggggcagaagtactggtcgatgatgatggggttcgccacctcctccatcctgatg 307
Query: 572 ttctcgaaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgacttgatg 631
||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 308 ttctcgaaggtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgacttgatg 367
Query: 632 cgcacgccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcacgtcc 691
||||||||||| ||||| |||||||||||||||| ||||||||| | |||| ||||||||
Sbjct: 368 cgcacgccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtcc 427
Query: 692 ttctcgtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccgcaggtg 751
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 428 ttctcatccttgtagcggcctaggcagccgatgctgatgccctgcccggggccgcagatg 487
Query: 752 atgctgtccaccaagacgccgttgcacccgggcccaa 788
||| || ||||| |||||||| || |||||| ||||
Sbjct: 488 atgttggtcaccatgacgccgtcgctcccggggccaa 524
>gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 643
Score = 539 bits (272), Expect = e-151
Identities = 383/420 (91%)
Strand = Plus / Minus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 420 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 361
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 360 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 301
Query: 392 tgcgtctccgagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttg 451
|| | || ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 300 tgtgactgcgagcagagcaggctgatggcctgtggcgtggacgacgtgcccgtgatgttg 241
Query: 452 cggaacgtgacgtccttgacggagacatgcgaggagttgctccgcttgccagggcatacc 511
||||||||||||||||||||| |||||| ||||||| |||| |||||| ||||| |||
Sbjct: 240 cggaacgtgacgtccttgacgatgacatgagaggagtcgctcttcttgccggggcacacc 181
Query: 512 ttctgcgggcagaagtactggtcgatgacgatggggttggccacctcctccatcctgatg 571
|||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 180 ttctcggggcagaagtactggtcgatgatgatggggttcgccacctcctccatcctgatg 121
Query: 572 ttctcgaaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgacttgatg 631
||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 120 ttctcgaaggtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgacttgatg 61
Query: 632 cgcacgccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcacgtcc 691
||||||||||| ||||| |||||||||||||||| ||||||||| | |||| ||||||||
Sbjct: 60 cgcacgccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtcc 1
>gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481784, DNA
sequence
Length = 647
Score = 480 bits (242), Expect = e-133
Identities = 337/369 (91%)
Strand = Plus / Plus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 279 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 338
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 339 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 398
Query: 392 tgcgtctccgagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttg 451
|| | || ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 399 tgtgactgcgagcagagcaggctgatggcctgtggcgtggacgacgtgcccgtgatgttg 458
Query: 452 cggaacgtgacgtccttgacggagacatgcgaggagttgctccgcttgccagggcatacc 511
||||||||||||||||||||| |||||| ||||||| |||| |||||| ||||| |||
Sbjct: 459 cggaacgtgacgtccttgacgatgacatgagaggagtcgctcttcttgccggggcacacc 518
Query: 512 ttctgcgggcagaagtactggtcgatgacgatggggttggccacctcctccatcctgatg 571
|||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 519 ttctcggggcagaagtactggtcgatgatgatggggttcgccacctcctccatcctgatg 578
Query: 572 ttctcgaaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgacttgatg 631
|||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 579 ttctcgaangtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgacttgatg 638
Query: 632 cgcacgccg 640
|||||||||
Sbjct: 639 cgcacgccg 647
>gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10508479, DNA
sequence
Length = 525
Score = 466 bits (235), Expect = e-129
Identities = 391/443 (88%)
Strand = Plus / Minus
Query: 568 gatgttctcgaaggtgagatgggaggccgtcagcacggactcggcgtccacgtacgactt 627
||||||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||
Sbjct: 525 gatgttctcgaaggtcagatgcgacgccgtcagcacagactcggcgtcctcgtacgactt 466
Query: 628 gatgcgcacgccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcac 687
||||||||||||||| ||||| |||||||||||||||| ||||||||| | |||| ||||
Sbjct: 465 gatgcgcacgccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcac 406
Query: 688 gtccttctcgtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccgca 747
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 405 gtccttctcatccttgtagcggcctaggcagccgatgctgatgccctgcccggggccgca 346
Query: 748 ggtgatgctgtccaccaagacgccgttgcacccgggcccaatcgagacgcagtcgtcgcc 807
| ||||| ||| ||||| |||||||| || |||||| |||| |||| ||||||||||||
Sbjct: 345 gatgatgttgttcaccatgacgccgtcgctcccggggccaacagagatgcagtcgtcgcc 286
Query: 808 ggtgccgatggtcgagttgaggatgctgatcttggaggagcctccgacgtggacgccgtc 867
||||||||||| |||||| |||||| | ||||| ||| ||| || |||||||||||
Sbjct: 285 agtgccgatggttgagttggtgatgctcaccttggtggacattccaacatggacgccgtc 226
Query: 868 cgtgttctcaacgtcggcgggcgcggtgacgttcacgtccttcacggtgatgctctctga 927
||||||||||||||| | |||||||||| ||||||||||||||| |||||| ||| |||
Sbjct: 225 cgtgttctcaacgtccccaggcgcggtgatgttcacgtccttcaccgtgatgttctttga 166
Query: 928 gttgtcgatgttgatgtggaagaacttggagttgagtagtttgattccggcgacagtggc 987
|||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 165 agcgtcgatattgatgtggaagaacttggagttgagtagtttgattccagagacagtgcc 106
Query: 988 gttgatcacgtgaaacagcacca 1010
|||| |||||| ||||||||||
Sbjct: 105 gttggtcacgtagaacagcacca 83
>gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 446 bits (225), Expect = e-123
Identities = 473/552 (85%), Gaps = 9/552 (1%)
Strand = Plus / Minus
Query: 964 tagtttgattccggcgacagtggcgttgatcacgtgaaacagcaccagtgtgttgggcat 1023
|||||||||||| | ||||||| ||||| |||||| |||||||||| |||||| |||||
Sbjct: 590 tagtttgattccagagacagtgccgttggtcacgtagaacagcaccaatgtgtttggcat 531
Query: 1024 cgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggccgtccagcgt 1083
||||||||| || |||| ||| ||| ||||||||||||| ||||||||||| |||||
Sbjct: 530 cgccttcacagtgccggttttggcctttttataaacggcggtgccctggccgtcgagcgt 471
Query: 1084 gcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagctcgccgtgta 1143
||||||||| || || ||||||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 470 gcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagctcgccttgta 411
Query: 1144 cttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgatgttgctgcc 1203
|||| |||||||||| |||||||||||||||||||| |||||||||| |||| || |||
Sbjct: 410 cttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgatg--gc-gcc 354
Query: 1204 cttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggggatcaccac 1263
|||||| || ||| ||||||||||||||||||||| ||||||||||||||||| | |||
Sbjct: 353 cttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggggatgagcac 294
Query: 1264 cgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtcctggactgcctttgtgca 1323
||||||||||||||||||| ||||||||||||||||||||| || || ||||||||| |
Sbjct: 293 cgtggcgcttccggtcgctctgcacgctgacgtccacgcgtcttgaaccgcctttgtgga 234
Query: 1324 gtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcccgccgctgcc 1383
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
Sbjct: 233 gtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcccg---ctggc 177
Query: 1384 tccagcagcgccaccgggggctgccgccgattcttccttgttggctcctgtccttttcgc 1443
||||| ||| || | | |||| ||||| ||| || | || ||||| |||||||||||
Sbjct: 176 tccagaagcagca---gagtctgctgccgagtctcccgtctttgctccggtccttttcgc 120
Query: 1444 tgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgttgtgtgcgga 1503
||||||||| || |||| | ||||||||||| ||||||| |||||| ||| ||||||
Sbjct: 119 tgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcattgcttgcgga 60
Query: 1504 agccatttctcc 1515
||||||||||||
Sbjct: 59 agccatttctcc 48
>gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a15, DNA
sequence
Length = 688
Score = 369 bits (186), Expect = e-100
Identities = 327/374 (87%)
Strand = Plus / Plus
Query: 637 gccgttggtggtgttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctc 696
|||||| ||||| |||||||||||||||| ||||||||| | |||| |||||||||||||
Sbjct: 1 gccgttagtggtcttcttgagcacgcagtcccgcaccgtcacgtcggtcacgtccttctc 60
Query: 697 gtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccgcaggtgatgct 756
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct: 61 atccttgtagcggcctaggcagccgatgctgatgccctgcccggggccgcagatgatgtt 120
Query: 757 gtccaccaagacgccgttgcacccgggcccaatcgagacgcagtcgtcgccggtgccgat 816
|| ||||| |||||||| || |||||| |||| |||| |||||||||||| ||||||||
Sbjct: 121 gttcaccatgacgccgtcgctcccggggccaacagagatgcagtcgtcgccagtgccgat 180
Query: 817 ggtcgagttgaggatgctgatcttggaggagcctccgacgtggacgccgtccgtgttctc 876
||| |||||| |||||| | ||||| ||| ||| || ||||||||||||||||||||
Sbjct: 181 ggttgagttggtgatgctcaccttggtggacattccaacatggacgccgtccgtgttctc 240
Query: 877 aacgtcggcgggcgcggtgacgttcacgtccttcacggtgatgctctctgagttgtcgat 936
|||||| | |||||||||| ||||||||||||||| |||||| ||| ||| ||||||
Sbjct: 241 aacgtccccaggcgcggtgatgttcacgtccttcaccgtgatgttctttgaagcgtcgat 300
Query: 937 gttgatgtggaagaacttggagttgagtagtttgattccggcgacagtggcgttgatcac 996
|||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||
Sbjct: 301 attgatgtggaagaacttggagttgagtagtttgattccagagacagtgccgttggtcac 360
Query: 997 gtgaaacagcacca 1010
|| ||||||||||
Sbjct: 361 gtagaacagcacca 374
Score = 176 bits (89), Expect = 4e-042
Identities = 158/181 (87%)
Strand = Plus / Plus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||
Sbjct: 481 gttgggcatcgccttcacagtgccggttttggcctttttataaacggcggtgccctggcc 540
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 541 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 600
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 601 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 660
Query: 1195 g 1195
|
Sbjct: 661 g 661
>gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 405
Score = 301 bits (152), Expect = 1e-079
Identities = 316/367 (86%), Gaps = 9/367 (2%)
Strand = Plus / Minus
Query: 1149 ccaggtcgtttgatcccagcaggttgccatccagctggatggcgatgttgctgcccttgc 1208
|||||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||
Sbjct: 402 ccaggtcgttggatcccagcaggttgccatcgagctggatggtgatg--gc-gcccttgc 346
Query: 1209 atggcccagtgaagttgagagggccgaccaggtagtcgcccttggggatcaccaccgtgg 1268
| || ||| ||||||||||||||||||||| ||||||||||||||||| | ||||||||
Sbjct: 345 acgggccaacgaagttgagagggccgaccagatagtcgcccttggggatgagcaccgtgg 286
Query: 1269 cgcttccggtcgcttcgcacgctgacgtccacgcgtcctggactgcctttgtgcagtccg 1328
|||||||||||||| ||||||||||||||||||||| || || ||||||||| ||||||
Sbjct: 285 cgcttccggtcgctctgcacgctgacgtccacgcgtcttgaaccgcctttgtggagtccg 226
Query: 1329 tcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcccgccgctgcctccag 1388
|||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 225 tcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcccg---ctggctccag 169
Query: 1389 cagcgccaccgggggctgccgccgattcttccttgttggctcctgtccttttcgctgtgc 1448
||| || | | |||| ||||| ||| || | || ||||| ||||||||||||||||
Sbjct: 168 aagcagca---gagtctgctgccgagtctcccgtctttgctccggtccttttcgctgtgc 112
Query: 1449 atacggcacataccacggctaggatgaaaaacacccggagagcgttgtgtgcggaagcca 1508
|||| || |||| | ||||||||||| ||||||| |||||| ||| |||||||||||
Sbjct: 111 ataccgcgcataggatcgctaggatgaagaacaccctgagagcattgcttgcggaagcca 52
Query: 1509 tttctcc 1515
|||||||
Sbjct: 51 tttctcc 45
>gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462903, DNA
sequence
Length = 656
Score = 285 bits (144), Expect = 6e-075
Identities = 256/291 (87%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||
Sbjct: 50 gttgggcatcgccttcacagtgccggttttggcctttttataaacggcggtgccctggcc 109
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 110 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 169
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 170 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 229
Query: 1195 gttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggg 1254
| || ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 230 g--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggg 286
Query: 1255 gatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 287 gatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 337
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Plus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 443 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 502
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 503 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 556
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 557 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 616
Query: 1494 tgtgtgcggaagccatttctcc 1515
|| ||||||||||||||||||
Sbjct: 617 tgcttgcggaagccatttctcc 638
>gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f006k08, DNA
sequence
Length = 735
Score = 285 bits (144), Expect = 6e-075
Identities = 256/291 (87%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||
Sbjct: 155 gttgggcatcgccttcacagtgccggttttggcctttttataaacggcggtgccctggcc 214
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 215 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 274
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 275 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 334
Query: 1195 gttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggg 1254
| || ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 335 g--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggg 391
Query: 1255 gatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 392 gatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 442
Score = 115 bits (58), Expect = 1e-023
Identities = 161/194 (82%), Gaps = 6/194 (3%)
Strand = Plus / Plus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 548 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 607
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 608 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 661
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 662 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 721
Query: 1494 tgtgtgcggaagcc 1507
|| ||||||||||
Sbjct: 722 tgcttgcggaagcc 735
Score = 48.1 bits (24), Expect = 0.002
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 963 gtagtttgattccggcgacagtggcgttgatcacgtgaaacagcacca 1010
||||||||||||| | ||||||| ||||| |||||| ||||||||||
Sbjct: 1 gtagtttgattccagagacagtgccgttggtcacgtagaacagcacca 48
>gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209d11, DNA
sequence
Length = 545
Score = 285 bits (144), Expect = 6e-075
Identities = 256/291 (87%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||
Sbjct: 382 gttgggcatcgccttcacagtgccggttttggcctttttataaacggcggtgccctggcc 323
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 322 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 263
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 262 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 203
Query: 1195 gttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggg 1254
| || ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 202 g--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggg 146
Query: 1255 gatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 145 gatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 95
>gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 738
Score = 278 bits (140), Expect = 1e-072
Identities = 255/291 (87%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| | | ||| ||||||||||||| ||||||||
Sbjct: 680 gttgggcatcgccttcacagtgccggtttgggcctttttataaacggcggtgccctggcc 621
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 620 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 561
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 560 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 501
Query: 1195 gttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggg 1254
| || ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 500 g--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggg 444
Query: 1255 gatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 gatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 393
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 287 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 228
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 227 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 174
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 173 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 114
Query: 1494 tgtgtgcggaagccatttctcc 1515
|| ||||||||||||||||||
Sbjct: 113 tgcttgcggaagccatttctcc 92
>gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100a22, DNA
sequence
Length = 671
Score = 266 bits (134), Expect = 6e-069
Identities = 225/253 (88%), Gaps = 3/253 (1%)
Strand = Plus / Minus
Query: 1053 tataaacggcggtcccctggccgtccagcgtgcccgagccggtgatcccgatgttgttaa 1112
||||||||||||| ||||||||||| ||||| |||||||| || || ||||||||| |
Sbjct: 670 tataaacggcggtgccctggccgtcgagcgtccccgagccagtcatgacgatgttgtcga 611
Query: 1113 cgtgagacaattcgatccagctcgccgtgtacttgtccaggtcgtttgatcccagcaggt 1172
|||| ||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||
Sbjct: 610 cgtgcgacaactcgatccagctcgccttgtacttggccaggtcgttggatcccagcaggt 551
Query: 1173 tgccatccagctggatggcgatgttgctgcccttgcatggcccagtgaagttgagagggc 1232
||||||| |||||||||| |||| || ||||||||| || ||| ||||||||||||||
Sbjct: 550 tgccatcgagctggatggtgatg--gc-gcccttgcacgggccaacgaagttgagagggc 494
Query: 1233 cgaccaggtagtcgcccttggggatcaccaccgtggcgcttccggtcgcttcgcacgctg 1292
||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 493 cgaccagatagtcgcccttggggatgagcaccgtggcgcttccggtcgctctgcacgctg 434
Query: 1293 acgtccacgcgtc 1305
|||||||||||||
Sbjct: 433 acgtccacgcgtc 421
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 315 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 256
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 255 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 202
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 201 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 142
Query: 1494 tgtgtgcggaagccatttctcc 1515
|| ||||||||||||||||||
Sbjct: 141 tgcttgcggaagccatttctcc 120
>gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462903, DNA
sequence
Length = 735
Score = 262 bits (132), Expect = 9e-068
Identities = 254/291 (87%), Gaps = 4/291 (1%)
Strand = Plus / Minus
Query: 1015 gttgggcatcgccttcacgttgtcggtcttgctcttgctataaacggcggtcccctggcc 1074
|||||||||||||||||| || |||| | || ||| ||||| |||||| ||||||||
Sbjct: 716 gttgggcatcgccttcacagtgccggtttggc-ctttttataacgggcggtgccctggcc 658
Query: 1075 gtccagcgtgcccgagccggtgatcccgatgttgttaacgtgagacaattcgatccagct 1134
||| |||||||||||||| || || ||||||||| ||||| ||||| |||||||||||
Sbjct: 657 gtcgagcgtgcccgagccagtcatgacgatgttgtcgacgtgcgacaactcgatccagct 598
Query: 1135 cgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggcgat 1194
|||| |||||||| |||||||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 597 cgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggtgat 538
Query: 1195 gttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggg 1254
| || ||||||||| || ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 537 g--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgcccttggg 481
Query: 1255 gatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 480 gatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 430
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 324 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 265
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 264 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 211
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 210 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 151
Query: 1494 tgtgtgcggaagccatttctcc 1515
|| ||||||||||||||||||
Sbjct: 150 tgcttgcggaagccatttctcc 129
>gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 308
Score = 202 bits (102), Expect = 7e-050
Identities = 147/162 (90%)
Strand = Plus / Minus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 162 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacagccatggtc 103
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 102 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 43
Query: 392 tgcgtctccgagcagagcaggctgatggcctcgggcgtggac 433
|| | || ||||||||||| ||||||||||| |||||||||
Sbjct: 42 tgtgactgcgagcagagcatgctgatggcctgtggcgtggac 1
>gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f006k08, DNA
sequence
Length = 665
Score = 196 bits (99), Expect = 4e-048
Identities = 157/174 (90%), Gaps = 3/174 (1%)
Strand = Plus / Minus
Query: 1132 gctcgccgtgtacttgtccaggtcgtttgatcccagcaggttgccatccagctggatggc 1191
||||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 665 gctcgccttgtacttggccaggtcgttggatcccagcaggttgccatcgagctggatggt 606
Query: 1192 gatgttgctgcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgccctt 1251
|||| || ||||||||| || ||| ||||||||||||||||||||| |||||||||||
Sbjct: 605 gatg--gc-gcccttgcacgggccaacgaagttgagagggccgaccagatagtcgccctt 549
Query: 1252 ggggatcaccaccgtggcgcttccggtcgcttcgcacgctgacgtccacgcgtc 1305
|||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 548 ggggatgagcaccgtggcgcttccggtcgctctgcacgctgacgtccacgcgtc 495
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 1314 cctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatgtcgaacgtcc 1373
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 389 cctttgtggagtccgtcttgccgtcgcccgtcgcgccgagcttggagatgtcgaacgtcc 330
Query: 1374 cgccgctgcctccagcagcgccaccgggggctgccgccgattcttccttgttggctcctg 1433
|| ||| |||||| ||| || | | |||| ||||| ||| || | || ||||| |
Sbjct: 329 cg---ctggctccagaagcagca---gagtctgctgccgagtctcccgtctttgctccgg 276
Query: 1434 tccttttcgctgtgcatacggcacataccacggctaggatgaaaaacacccggagagcgt 1493
||||||||||||||||||| || |||| | ||||||||||| ||||||| |||||| |
Sbjct: 275 tccttttcgctgtgcataccgcgcataggatcgctaggatgaagaacaccctgagagcat 216
Query: 1494 tgtgtgcggaagccatttctcc 1515
|| ||||||||||||||||||
Sbjct: 215 tgcttgcggaagccatttctcc 194
>gb|CF483069.1|CF483069 POL1_11_C05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_11_C05_A002 3', mRNA sequence
Length = 525
Score = 178 bits (90), Expect = 1e-042
Identities = 114/122 (93%)
Strand = Plus / Minus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 128 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 69
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 68 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 9
Query: 392 tg 393
||
Sbjct: 8 tg 7
>gb|BG239969.1|BG239969 OV1_31_D01.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 176 bits (89), Expect = 4e-042
Identities = 113/121 (93%)
Strand = Plus / Minus
Query: 272 gccagtgcctcgatgcttcccttggcggtgcccttggcgttgctgcagacggccatggtt 331
||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gccagggcctcgacgctgcccttggcggtgcccttggcgttgctgcacacggccatggtc 62
Query: 332 ttgttgttcttgccggcgtactccacgttgacatcgatgagggagacgccgctgcatggc 391
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 61 ttgttgttcttgccggcgtactccacgtttacatcgatgagcgacacgccgctgcatggc 2
Query: 392 t 392
|
Sbjct: 1 t 1
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Plus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 144 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 203
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 204 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 263
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 264 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 323
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 324 caggctgccgacgctgatgccgtggccgggcccgcaggtga 364
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 19 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 78
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 79 acgtccttgacgg 91
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 471 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 412
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 411 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 352
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 351 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 292
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 291 caggctgccgacgctgatgccgtggccgggcccgcaggtga 251
Score = 52.0 bits (26), Expect = 2e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 428 gtggacgacgtgccggtgatgttgcggaacgtgacgtccttgacgg 473
||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 569 gtggatgaggtgccggtgatgttcttgaacgtgacgtccttgacgg 524
Score = 46.1 bits (23), Expect = 0.010
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 941 atgtggaagaacttggagttgagtagtttgattccggcgacagtggcgttg 991
|||||||||||||||||||| || || |||| |||| ||| |||||||||
Sbjct: 62 atgtggaagaacttggagttcagcagggtgatcccggagacggtggcgttg 12
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 118 cgggcgcggtgacggtcacgtcctt 94
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 543 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 484
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 483 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 424
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 423 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 364
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 363 caggctgccgacgctgatgccgtggccgggcccgcaggtga 323
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 668 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 609
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 608 acgtccttgacgg 596
Score = 46.1 bits (23), Expect = 0.010
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 941 atgtggaagaacttggagttgagtagtttgattccggcgacagtggcgttg 991
|||||||||||||||||||| || || |||| |||| ||| |||||||||
Sbjct: 134 atgtggaagaacttggagttcagcagggtgatcccggagacggtggcgttg 84
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 190 cgggcgcggtgacggtcacgtcctt 166
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 546 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 487
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 486 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 427
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 426 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 367
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 366 caggctgccgacgctgatgccgtggccgggcccgcaggtga 326
Score = 73.8 bits (37), Expect = 4e-011
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||| || || ||||| || |||||||||||||| |||||||
Sbjct: 671 gagcagagcaggctgacggcttccggggtggatgaggtgccggtgatgttcttgaacgtg 612
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 611 acgtccttgacgg 599
Score = 46.1 bits (23), Expect = 0.010
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 941 atgtggaagaacttggagttgagtagtttgattccggcgacagtggcgttg 991
|||||||||||||||||||| || || |||| |||| ||| |||||||||
Sbjct: 137 atgtggaagaacttggagttcagcagggtgatcccggagacggtggcgttg 87
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 193 cgggcgcggtgacggtcacgtcctt 169
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 387 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 328
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 327 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 268
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 267 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 208
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 207 caggctgccgacgctgatgccgtggccgggcccgcaggtga 167
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 512 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 453
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 452 acgtccttgacgg 440
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 34 cgggcgcggtgacggtcacgtcctt 10
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 97.6 bits (49), Expect = 3e-018
Identities = 178/221 (80%)
Strand = Plus / Minus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 387 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 328
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggtgtt 651
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| |||| ||
Sbjct: 327 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggtctt 268
Query: 652 cttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcggcc 711
||||||| ||||| | || ||||||| |||| |||||||| |||||||| | |||
Sbjct: 267 cttgagcgtgcagtccttgacgttgatgtccgtcacatccttctcatccttgtacctgcc 208
Query: 712 taggcagccgacgctgatgccctgcccggggccgcaggtga 752
|||| ||||||||||||||| || ||||| ||||||||||
Sbjct: 207 caggctgccgacgctgatgccgtggccgggcccgcaggtga 167
Score = 65.9 bits (33), Expect = 1e-008
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||| | || ||||| || |||||||||||||| |||||||
Sbjct: 512 gagcagagcaggctgacggctcccggggtggatgaggtgccggtgatgttcttgaacgtg 453
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 452 acgtccttgacgg 440
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 34 cgggcgcggtgacggtcacgtcctt 10
>gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51a01 5', DNA sequence
Length = 554
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 413 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 472
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 473 acgtccttgacgg 485
>gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 704
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 441 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 500
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 501 acgtccttgacgg 513
Score = 50.1 bits (25), Expect = 6e-004
Identities = 94/117 (80%)
Strand = Plus / Plus
Query: 532 gtcgatgacgatggggttggccacctcctccatcctgatgttctcgaaggtgagatggga 591
|||||||| ||||||||||||||| || ||||| ||||||||| || ||| | |||
Sbjct: 566 gtcgatgatgatggggttggccacgtcgtccatggctatgttctcgtagtggagcttgga 625
Query: 592 ggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
||| || | |||| || |||||||| |||| |||||||| || ||||| ||| ||||
Sbjct: 626 ggcagtgatcacgcacgcggcgtcctcgtaggacttgatccggacgccattgctggt 682
>gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 81.8 bits (41), Expect = 2e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| |||||| || ||||| || |||||||||||||| |||||||
Sbjct: 145 gagcagagcaggctgacggcctccggggtggatgaggtgccggtgatgttcttgaacgtg 86
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 85 acgtccttgacgg 73
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 77.8 bits (39), Expect = 3e-012
Identities = 117/143 (81%)
Strand = Plus / Plus
Query: 610 ggcgtccacgtacgacttgatgcgcacgccgttggtggtgttcttgagcacgcagttccg 669
||||||| |||| |||||||| || ||||| ||| |||| ||||||||| ||||| |
Sbjct: 1 ggcgtcctcgtaggacttgatccggacgccattgctggtcttcttgagcgtgcagtcctt 60
Query: 670 caccgtgatgtcgctcacgtccttctcgtccttgtagcggcctaggcagccgacgctgat 729
|| ||||||| |||| |||||||| |||||||| | ||| |||| ||||||||||||
Sbjct: 61 gacgttgatgtccgtcacatccttctcatccttgtacctgcccaggctgccgacgctgat 120
Query: 730 gccctgcccggggccgcaggtga 752
||| || ||||| ||||||||||
Sbjct: 121 gccgtggccgggcccgcaggtga 143
Score = 46.1 bits (23), Expect = 0.010
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 941 atgtggaagaacttggagttgagtagtttgattccggcgacagtggcgttg 991
|||||||||||||||||||| || || |||| |||| ||| |||||||||
Sbjct: 332 atgtggaagaacttggagttcagcagggtgatcccggagacggtggcgttg 382
Score = 42.1 bits (21), Expect = 0.15
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 885 cgggcgcggtgacgttcacgtcctt 909
|||||||||||||| ||||||||||
Sbjct: 276 cgggcgcggtgacggtcacgtcctt 300
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Plus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 84 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 143
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 144 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 203
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 204 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 247
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 366 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 307
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 306 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 247
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 246 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 203
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 548 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 489
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 488 acgtccttgacgg 476
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 655 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 604
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 527 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 468
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 467 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 408
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 407 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 364
Score = 44.1 bits (22), Expect = 0.038
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcggg 426
|||||||||||||||| |||||||||
Sbjct: 709 gagcagagcaggctgacggcctcggg 684
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 172 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 113
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 112 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 53
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 52 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 9
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 354 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 295
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 294 acgtccttgacgg 282
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 461 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 410
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 303 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 244
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 243 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 184
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 183 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 140
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 220 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 161
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 160 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 101
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 100 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 57
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 402 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 343
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 342 acgtccttgacgg 330
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 509 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 458
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 679 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 620
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 619 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 560
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 559 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 516
Score = 58.0 bits (29), Expect = 3e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1201 gcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggggat 1257
||||||||| || || ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 61 gcccttgcacgggccggtgaagttgagtggtccgacgaggtagtcgcccttagggat 5
>gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 3', mRNA sequence
Length = 402
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 164 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 105
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 104 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 45
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 44 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 1
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 267 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 216
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 167 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 108
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 107 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 48
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 47 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 4
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 349 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 290
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 289 acgtccttgacgg 277
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 456 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 405
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 575 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 516
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 515 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 456
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 455 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 412
Score = 44.1 bits (22), Expect = 0.038
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1304 tcctggactgcctttgtgcagtccgtcttgccgtcgctggtcgcgccgagcttggagatg 1363
||||| || ||||| |||| |||| |||||||||||| || ||||| | |||| ||||
Sbjct: 218 tcctgcacagccttcgtgctgtccttcttgccgtcgccggaggcgcccaacttgctgatg 159
Query: 1364 tcgaacgtcccgcc 1377
||||||| ||||||
Sbjct: 158 tcgaacgacccgcc 145
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 195 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 136
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 135 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 76
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 75 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 32
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 484 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 433
Score = 42.1 bits (21), Expect = 0.15
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
||||| |||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 377 gagcaaagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 318
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 317 acgtccttgacgg 305
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 207 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 148
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 147 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 88
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 87 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 44
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 389 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 330
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 329 acgtccttgacgg 317
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 496 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 445
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 203 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 144
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 143 cttctttagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 84
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 83 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 40
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 385 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 326
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 325 acgtccttgacgg 313
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 492 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 441
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 164 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 105
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 104 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 45
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 44 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 401 gagcagagcaggctgatggcctcgggcgtggacgacgtgccggtgatgttgcggaacgtg 460
|||||||||||||||| ||||||||| ||| || |||||||||| ||| ||| | |
Sbjct: 346 gagcagagcaggctgacggcctcggggctggcggaggtgccggtgacgttcttgaaggag 287
Query: 461 acgtccttgacgg 473
|||||||||||||
Sbjct: 286 acgtccttgacgg 274
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 453 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 402
>gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 3', mRNA sequence
Length = 629
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 164 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 105
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 104 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 45
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 44 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 1
>gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_A05_A002 3', mRNA sequence
Length = 678
Score = 71.9 bits (36), Expect = 2e-010
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 589 ggaggccgtcagcacggactcggcgtccacgtacgacttgatgcgcacgccgttggtggt 648
|||||| || |||||||| |||||||| |||||| |||||| || | ||||||| | ||
Sbjct: 356 ggaggcggtgagcacggaggcggcgtcctcgtacgccttgatccggaggccgttgctcgt 297
Query: 649 gttcttgagcacgcagttccgcaccgtgatgtcgctcacgtccttctcgtccttgtagcg 708
||||| ||| |||| | ||| ||||||| | |||||||||||||||||||| ||
Sbjct: 296 cttcttcagcgtacagtccttcacgttgatgtccgtgacgtccttctcgtccttgtaccg 237
Query: 709 gcctaggcagccgacgctgatgccctgcccggggccgcaggtga 752
|| |||| ||||| ||||||||| || ||||||||||| ||||
Sbjct: 236 ccccaggctgccgatgctgatgccatggccggggccgcatgtga 193
Score = 48.1 bits (24), Expect = 0.002
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 294 tggcggtgcccttggcgttgctgcagacggccatggttttgttgttcttgcc 345
||||| ||||||||||||| ||| ||||||||||| |||||||| |||||
Sbjct: 459 tggcgctgcccttggcgttttggcatacggccatggtcttgttgtttttgcc 408
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 69.9 bits (35), Expect = 7e-010
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 686 acgtccttctcgtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccg 745
|||||||||||||||||||| || || |||| ||||| ||||||||| || |||||||||
Sbjct: 74 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 133
Query: 746 caggtga 752
|| ||||
Sbjct: 134 catgtga 140
>gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_E06_A002 5', mRNA sequence
Length = 556
Score = 69.9 bits (35), Expect = 7e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 686 acgtccttctcgtccttgtagcggcctaggcagccgacgctgatgccctgcccggggccg 745
|||||||||||||||||||| || || |||| ||||| ||||||||| || |||||||||
Sbjct: 524 acgtccttctcgtccttgtaccgccccaggctgccgatgctgatgccatggccggggccg 465
Query: 746 caggtga 752
|| ||||
Sbjct: 464 catgtga 458
Score = 60.0 bits (30), Expect = 6e-007
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 1284 cgcacgctgacgtccacgcgtcctggactgcctttgtgcagtccgtcttgccgtcgctgg 1343
||||||| |||||||| || ||||| || ||||| |||| |||| |||||||||||| ||
Sbjct: 241 cgcacgccgacgtccatgcctcctgcacagccttcgtgctgtccttcttgccgtcgccgg 182
Query: 1344 tcgcgccgagcttggagatgtcgaacgtcccgcc 1377
||||| | |||| ||||||||||| ||||||
Sbjct: 181 aggcgcccaacttgctgatgtcgaacgacccgcc 148
Score = 58.0 bits (29), Expect = 3e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 1201 gcccttgcatggcccagtgaagttgagagggccgaccaggtagtcgcccttggggat 1257
||||||||| || || ||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 324 gcccttgcacgggccggtgaagttgagtggtccgacgaggtagtcgcccttagggat 268
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 472,209
Number of Sequences: 832831
Number of extensions: 472209
Number of successful extensions: 144512
Number of sequences better than 0.5: 159
Number of HSP's better than 0.5 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143926
Number of HSP's gapped (non-prelim): 567
length of query: 1531
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1511
effective length of database: 474,703,049
effective search space: 717276307039
effective search space used: 717276307039
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)