BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696569.2.1
(1022 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 896 0.0
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 827 0.0
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 767 0.0
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 706 0.0
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 704 0.0
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 682 0.0
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 650 0.0
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 601 e-170
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 565 e-159
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 539 e-151
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 535 e-150
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 533 e-149
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 533 e-149
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 533 e-149
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 531 e-149
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 523 e-146
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 509 e-142
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 507 e-142
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 507 e-142
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 507 e-142
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 507 e-142
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 494 e-138
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 488 e-136
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 488 e-136
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 480 e-133
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 478 e-133
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 472 e-131
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 468 e-130
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 466 e-129
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 448 e-124
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 426 e-117
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 424 e-117
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 422 e-116
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 398 e-109
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 398 e-109
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 375 e-102
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 343 2e-092
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 341 8e-092
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 339 3e-091
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 331 7e-089
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 331 7e-089
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 327 1e-087
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 325 5e-087
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 309 3e-082
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 291 6e-077
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 289 3e-076
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 283 2e-074
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 272 6e-071
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 266 4e-069
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 246 3e-063
gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG... 240 2e-061
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 238 8e-061
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 232 5e-059
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 232 5e-059
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 224 1e-056
gb|BI075536.1|BI075536 IP1_21_G05.g1_A002 Immature pannicle... 218 8e-055
gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stress... 182 4e-044
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 174 1e-041
gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassino... 172 4e-041
gb|BG557596.1|BG557596 EM1_53_G02.g1_A002 Embryo 1 (EM1) So... 163 4e-038
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 147 2e-033
gb|BE361871.1|BE361871 DG1_82_G01.g1_A002 Dark Grown 1 (DG1... 145 9e-033
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 139 6e-031
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 139 6e-031
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 137 2e-030
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 137 2e-030
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 137 2e-030
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 135 9e-030
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 135 9e-030
gb|CW416233.1|CW416233 fsbb001f116l03k0 Sorghum methylation... 135 9e-030
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 135 9e-030
gb|BE355609.1|BE355609 DG1_115_F11.g1_A002 Dark Grown 1 (DG... 133 4e-029
gb|BG557821.1|BG557821 EM1_53_G02.b1_A002 Embryo 1 (EM1) So... 133 4e-029
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 121 1e-025
gb|CW071439.1|CW071439 104_323_10591520_114_30474 Sorghum m... 117 2e-024
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 115 8e-024
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 113 3e-023
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 109 5e-022
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 109 5e-022
gb|CW171728.1|CW171728 104_582_11155897_116_36529_005 Sorgh... 109 5e-022
gb|CF429625.1|CF429625 PH1_23_G06.b1_A002 Phosphorous-defic... 107 2e-021
gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorgh... 105 8e-021
gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) So... 105 8e-021
gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) So... 105 8e-021
gb|CW061554.1|CW061554 104_305_10520462_114_30152 Sorghum m... 103 3e-020
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 103 3e-020
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 103 3e-020
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 103 3e-020
gb|BZ351153.1|BZ351153 hv19c03.g1 WGS-SbicolorF (JM107 adap... 101 1e-019
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 100 5e-019
gb|BG102062.1|BG102062 RHIZ2_24_D04.g1_A003 Rhizome2 (RHIZ2... 98 2e-018
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 96 8e-018
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 96 8e-018
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 94 3e-017
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 94 3e-017
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 94 3e-017
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 94 3e-017
gb|BE125768.1|BE125768 DG1_57_A08.b1_A002 Dark Grown 1 (DG1... 94 3e-017
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 90 5e-016
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 90 5e-016
gb|BG357140.1|BG357140 OV2_10_D01.b1_A002 Ovary 2 (OV2) Sor... 90 5e-016
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 90 5e-016
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 90 5e-016
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 86 7e-015
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 86 7e-015
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 86 7e-015
gb|BI351300.1|BI351300 IP1_69_H01.b1_A002 Immature pannicle... 86 7e-015
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 86 7e-015
gb|CW083025.1|CW083025 104_425_10944087_116_32356_060 Sorgh... 84 3e-014
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 84 3e-014
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 84 3e-014
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 82 1e-013
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 82 1e-013
gb|CD229951.1|CD229951 SS1_40_H09.b1_A012 Salt-stressed see... 82 1e-013
gb|CW059495.1|CW059495 104_302_10519350_115_30168 Sorghum m... 80 5e-013
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 80 5e-013
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 80 5e-013
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 80 5e-013
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 80 5e-013
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 80 5e-013
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 80 5e-013
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 80 5e-013
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 80 5e-013
gb|CD462412.1|CD462412 ETH1_37_C09.g1_A002 Ethylene-treated... 80 5e-013
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 78 2e-012
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 78 2e-012
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 78 2e-012
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 78 2e-012
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 76 7e-012
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 76 7e-012
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 74 3e-011
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 74 3e-011
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 74 3e-011
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 74 3e-011
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 74 3e-011
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 74 3e-011
gb|CW379039.1|CW379039 fsbb001f058b16k0 Sorghum methylation... 74 3e-011
gb|AW284885.1|AW284885 LG1_295_D10.g1_A002 Light Grown 1 (L... 74 3e-011
gb|BG356815.1|BG356815 OV2_10_D01.g1_A002 Ovary 2 (OV2) Sor... 74 3e-011
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 72 1e-010
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 72 1e-010
gb|CW406941.1|CW406941 fsbb001f100d03k0 Sorghum methylation... 72 1e-010
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 72 1e-010
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 72 1e-010
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 70 4e-010
gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorg... 70 4e-010
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 70 4e-010
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 70 4e-010
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 70 4e-010
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 70 4e-010
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 70 4e-010
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 68 2e-009
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 68 2e-009
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 68 2e-009
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 68 2e-009
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 68 2e-009
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 68 2e-009
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 68 2e-009
gb|BE596166.1|BE596166 PI1_50_D05.b1_A002 Pathogen induced ... 68 2e-009
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 68 2e-009
gb|CL171844.1|CL171844 104_374_10889716_148_31774_004 Sorgh... 66 7e-009
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 66 7e-009
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 66 7e-009
gb|CW204511.1|CW204511 104_632_11186581_148_36922_055 Sorgh... 66 7e-009
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 66 7e-009
gb|CW221658.1|CW221658 104_656_11198028_116_37169_034 Sorgh... 66 7e-009
gb|CW406236.1|CW406236 fsbb001f099c15k0 Sorghum methylation... 66 7e-009
gb|CW408700.1|CW408700 fsbb001f102l07f0 Sorghum methylation... 66 7e-009
gb|CW126000.1|CW126000 104_506_11112648_116_34721_088 Sorgh... 64 3e-008
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 64 3e-008
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 62 1e-007
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 62 1e-007
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 62 1e-007
gb|CW470839.1|CW470839 fsbb001f224e15k0 Sorghum methylation... 62 1e-007
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 60 4e-007
gb|BF421314.1|BF421314 FM1_7_B08.b1_A003 Floral-Induced Mer... 60 4e-007
gb|BZ413005.1|BZ413005 203a3_20 Subclones from BAC clones m... 58 2e-006
gb|CL174842.1|CL174842 104_379_10891942_116_31769_310 Sorgh... 58 2e-006
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 58 2e-006
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 58 2e-006
gb|CW231486.1|CW231486 104_680_11211147_148_37339_004 Sorgh... 56 7e-006
gb|BG047968.1|BG047968 OV1_26_A06.g1_A002 Ovary 1 (OV1) Sor... 56 7e-006
gb|BG356953.1|BG356953 OV2_12_A12.g1_A002 Ovary 2 (OV2) Sor... 56 7e-006
gb|BG557254.1|BG557254 EM1_44_E12.g1_A002 Embryo 1 (EM1) So... 56 7e-006
gb|BG947272.1|BG947272 IP1_3_E11.b1_A002 Immature pannicle ... 56 7e-006
gb|BI099255.1|BI099255 IP1_40_E08.g1_A002 Immature pannicle... 56 7e-006
gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) So... 56 7e-006
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 56 7e-006
gb|CW059831.1|CW059831 104_303_10519536_1_30042 Sorghum met... 54 3e-005
gb|CW122717.1|CW122717 104_501_11110823_116_34677_084 Sorgh... 54 3e-005
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 54 3e-005
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 54 3e-005
gb|CW032534.1|CW032534 104_261_10501433_115_30364 Sorghum m... 52 1e-004
gb|CW294637.1|CW294637 104_775_11415292_116_36233_006 Sorgh... 52 1e-004
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 50 4e-004
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 50 4e-004
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 50 4e-004
gb|BG556478.1|BG556478 EM1_37_F06.g1_A002 Embryo 1 (EM1) So... 50 4e-004
gb|CN144118.1|CN144118 WOUND1_20_G04.b1_A002 Wounded leaves... 50 4e-004
gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorgh... 48 0.002
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 48 0.002
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 48 0.002
gb|CW140473.1|CW140473 104_531_11135799_116_34926_064 Sorgh... 48 0.002
gb|CW140474.1|CW140474 104_531_11135799_148_34922_064 Sorgh... 48 0.002
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 48 0.002
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 48 0.002
gb|CW260111.1|CW260111 104_726_11228790_116_35191_019 Sorgh... 48 0.002
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG713853.1|BG713853 EM1_20_F03.g2_A002 Embryo 1 (EM1) So... 48 0.002
gb|CW131067.1|CW131067 104_513_11115467_116_34780_034 Sorgh... 46 0.006
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 46 0.006
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 46 0.006
gb|BG051053.1|BG051053 FM1_55_G05.b1_A003 Floral-Induced Me... 46 0.006
gb|CN135093.1|CN135093 OX1_30_C01.g1_A002 Oxidatively-stres... 46 0.006
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 44 0.025
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 44 0.025
gb|CW294293.1|CW294293 104_775_11415113_116_35774_077 Sorgh... 44 0.025
gb|CW294294.1|CW294294 104_775_11415113_148_35775_077 Sorgh... 44 0.025
gb|CW408348.1|CW408348 fsbb001f102d08f0 Sorghum methylation... 44 0.025
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 42 0.099
gb|CL181627.1|CL181627 104_392_10896876_148_31925_252 Sorgh... 42 0.099
gb|CL185078.1|CL185078 104_398_10899280_116_32371_050 Sorgh... 42 0.099
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 42 0.099
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 42 0.099
gb|CW481355.1|CW481355 fsbb001f240o03k0 Sorghum methylation... 42 0.099
gb|CL701592.2|CL701592 SP__Ba0074L09.f SP__Ba Sorghum propi... 42 0.099
gb|BG158990.1|BG158990 RHIZ2_41_C11.b1_A003 Rhizome2 (RHIZ2... 42 0.099
gb|BG158998.1|BG158998 RHIZ2_41_D11.b1_A003 Rhizome2 (RHIZ2... 42 0.099
gb|BI075898.1|BI075898 IP1_22_F11.b1_A002 Immature pannicle... 42 0.099
gb|CD230432.1|CD230432 SS1_43_D08.g1_A012 Salt-stressed see... 42 0.099
gb|CD463185.1|CD463185 ETH1_42_C07.g1_A002 Ethylene-treated... 42 0.099
gb|CF431597.1|CF431597 NIT1_8_C11.g1_A002 Nitrogen-deficien... 42 0.099
gb|CF432557.1|CF432557 NIT1_17_C03.g1_A002 Nitrogen-deficie... 42 0.099
gb|CF481792.1|CF481792 POL1_74_D07.b1_A002 Pollen Sorghum b... 42 0.099
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 42 0.099
gb|CX610949.1|CX610949 ANR1_21_F05.g1_A002 Anaerobic roots ... 42 0.099
gb|CX614400.1|CX614400 GABR1_13_G04.g1_A002 GA- or brassino... 42 0.099
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 40 0.39
gb|BZ366787.1|BZ366787 ic99c10.b1 WGS-SbicolorF (JM107 adap... 40 0.39
gb|CW088882.1|CW088882 104_434_10948378_115_32585_047 Sorgh... 40 0.39
gb|CW096538.1|CW096538 104_462_11001950_116_34349_059 Sorgh... 40 0.39
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 40 0.39
gb|CW144576.1|CW144576 104_536_11138014_116_34967_083 Sorgh... 40 0.39
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 40 0.39
gb|CW214675.1|CW214675 104_646_11194139_116_37048_036 Sorgh... 40 0.39
gb|CW267474.1|CW267474 104_737_11400757_116_35291_051 Sorgh... 40 0.39
gb|CW316040.1|CW316040 104_807_11472683_116_35840_042 Sorgh... 40 0.39
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 40 0.39
gb|BE359781.1|BE359781 DG1_57_A08.g2_A002 Dark Grown 1 (DG1... 40 0.39
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 40 0.39
gb|CF484317.1|CF484317 POL1_4_C04.g1_A002 Pollen Sorghum bi... 40 0.39
gb|CF486646.1|CF486646 POL1_38_H11.g1_A002 Pollen Sorghum b... 40 0.39
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 896 bits (452), Expect = 0.0
Identities = 575/616 (93%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 220 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 279
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 280 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 339
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 340 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 399
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 459
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 460 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 519
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacggg 431
||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 520 gtcgcctacaggagggtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggc 579
Query: 432 cactcctacttcaacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctcc 491
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 580 cactcctacttcaacctggtgctggtgaccaacgtggccggcgccggggacgtgcagtcc 639
Query: 492 gtctccatccggggctcccgcacggggtggcagcccatgtcccggaactggggccagaac 551
||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtctccatcaagggctccagcaccgggtggcagcccatgtcccggaactggggccagaac 699
Query: 552 tggcagagcaactcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgac 611
||||||||||||||| ||| ||| | ||| ||||| |||||||||||||||||||||
Sbjct: 700 tggcagagcaactcgctcctcgacggccagagcctctccttccaggtcaccgccagcgac 759
Query: 612 ggccgcaccgtcaccagcaacggcgccgtccccgccggctggcagttcggccagaccttc 671
||||||||||||||||||||||||| || || || ||||||||||||||||||||||||
Sbjct: 760 ggccgcaccgtcaccagcaacggcgtcgcgccggcgggctggcagttcggccagaccttc 819
Query: 672 gagggcggccagttct 687
||||||| ||||||||
Sbjct: 820 gagggcgcccagttct 835
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 827 bits (417), Expect = 0.0
Identities = 529/565 (93%), Gaps = 1/565 (0%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 223 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 282
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 283 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 342
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 343 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 402
Query: 252 ccgcccaactacggcctccccagcgacgacgg-cggctggtgcaacccgccgcgcccgca 310
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 403 ccgcccaactacggcctccccagcgacgacgggcggctggtgcaacccgccgcgcccgca 462
Query: 311 cttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgcc 370
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 463 cttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgcc 522
Query: 371 cgtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgg 430
|||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 523 cgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatccggttcaccatcaacgg 582
Query: 431 gcactcctacttcaacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctc 490
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 583 ccactcctacttcaacctggtgctggtgaccaacgtggccggcgccggggacgtgcagtc 642
Query: 491 cgtctccatccggggctcccgcacggggtggcagcccatgtcccggaactggggccagaa 550
|||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 643 cgtctccatcaagggctccagcaccgggtggcagcccatgtcccggaactggggccagaa 702
Query: 551 ctggcagagcaactcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcga 610
|||||||||||||||| ||| ||| | ||| ||||| ||||||||||||||||||||
Sbjct: 703 ctggcagagcaactcgctcctcgacggccagagcctctccttccaggtcaccgccagcga 762
Query: 611 cggccgcaccgtcaccagcaacggc 635
|||||||||||||||||||||||||
Sbjct: 763 cggccgcaccgtcaccagcaacggc 787
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 767 bits (387), Expect = 0.0
Identities = 468/495 (94%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 207 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 266
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 267 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 326
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 327 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttttgc 386
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 446
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 447 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 506
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacggg 431
||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 507 gtcgcctacaggagggtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggc 566
Query: 432 cactcctacttcaacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctcc 491
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 567 cactcctacttcaacctggtgctggtgaccaacgtggccggcgccggggacgtgcagtcc 626
Query: 492 gtctccatccggggctcccgcacggggtggcagcccatgtcccggaactggggccagaac 551
||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtctccatcaagggctccagcaccgggtggcagcccatgtcccggaactggggccagaac 686
Query: 552 tggcagagcaactcg 566
|||||||||||||||
Sbjct: 687 tggcagagcaactcg 701
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 706 bits (356), Expect = 0.0
Identities = 431/456 (94%)
Strand = Plus / Plus
Query: 84 gggtacggcaacctgtacagcacggggtacggcacgagcacggcggcgctgagcacggcg 143
|||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 236 gggtacgggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcg 295
Query: 144 ctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgcgacaacgacggg 203
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 296 ctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgcgacaacgacggg 355
Query: 204 cggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgcccgcccaactac 263
| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 356 cagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgcccgcccaactac 415
Query: 264 ggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcacttcgacatggcc 323
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcacttcgacatggcg 475
Query: 324 gagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgcccgtcgcgttcagg 383
||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 476 cagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgcccgtcgcctacagg 535
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
|| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||
Sbjct: 536 agggtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggccactcctacatc 595
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |
Sbjct: 596 aacctggtgctggtgaccaacgtggccggcgccggggacgtgcagtccgtctccatcaag 655
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaac 539
|||||| |||| ||||||||||||||||||||||||
Sbjct: 656 ggctccagcaccgggtggcagcccatgtcccggaac 691
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 704 bits (355), Expect = 0.0
Identities = 463/499 (92%)
Strand = Plus / Plus
Query: 189 tgcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttc 248
|||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct: 2 tgcgacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttc 61
Query: 249 tgcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccg 121
Query: 309 cacttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtg 368
||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 122 cacttggacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtg 181
Query: 369 cccgtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaac 428
|||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 182 cccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatccggttcaccatcaac 241
Query: 429 gggcactcctacttcaacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgc 488
|| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 242 ggccactcctacttcaacctggtgctggtgaccaacgtggccggcgccggggacgtgcag 301
Query: 489 tccgtctccatccggggctcccgcacggggtggcagcccatgtcccggaactggggccag 548
|||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 302 tccgtctccatcaagggctccagcaccgggtggcagcccatgtcccggaactggggccag 361
Query: 549 aactggcagagcaactcgtacctggacaggcaggcgctctcgttccaggtcaccgccagc 608
|||||||||||||||||| ||| ||| | ||| ||||| ||||||||||||||||||
Sbjct: 362 aactggcagagcaactcgctcctcgacggccagagcctctccttccaggtcaccgccagc 421
Query: 609 gacggccgcaccgtcaccagcaacggcgccgtccccgccggctggcagttcggccagacc 668
|||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 422 gacggccgcaccgtcaccagcaacggcgtcgcgccggcgggctggcagttcggccagacc 481
Query: 669 ttcgagggcggccagttct 687
|||||||||| ||||||||
Sbjct: 482 ttcgagggcgcccagttct 500
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 682 bits (344), Expect = 0.0
Identities = 384/396 (96%), Gaps = 1/396 (0%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 251 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 310
Query: 132 ctgag-cacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtg 190
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctgagncacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtg 370
Query: 191 cgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctg 250
|||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 cgacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctg 430
Query: 251 cccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgca 310
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 ccctcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcggccgca 490
Query: 311 cttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgcc 370
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 491 cttcgacatggccgagcccgccttcctccacatcgcgcagtaccgcgccggcatcgtgcc 550
Query: 371 cgtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgg 430
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cgtcgccttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgg 610
Query: 431 gcactcctacttcaacctggtgctggtgaccaacgt 466
||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcactcctacttcaacctggtgctggtgaccaacgt 646
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 650 bits (328), Expect = 0.0
Identities = 385/404 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 229 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 288
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 289 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 348
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 349 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 408
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 468
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 469 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 528
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacggg 431
||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 529 gtcgcctacaggagggtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggc 588
Query: 432 cactcctacttcaacctggtgctggtgaccaacgtggcgggcgc 475
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 589 cactcctacttcaacctggtgctggtgaccaacgtggccggcgc 632
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 601 bits (303), Expect = e-170
Identities = 342/355 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 253 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 312
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 313 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacaagctgcggtgc 372
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 373 gacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 432
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
|| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 433 cctcccaactacggcctccccagcgacaacggcggctggtgcaacccgccgcggccgcac 492
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 493 ttcgacatggccgagcccgccttcctccacatcgcgcagtaccgcgccggcatcgtgccc 552
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatca 426
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtcgccttcaggagagtgccgtgcgtgaagaagggcggcatccggttcaccatca 607
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 565 bits (285), Expect = e-159
Identities = 318/329 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 253 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 312
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 372
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 373 gacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 432
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 433 cctcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcggccgcac 492
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 493 ttcgacatggccgagcccgccttcctccacatcgcgcagtaccgcgccggcatcgtgccc 552
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaa 400
||||| |||||||||||||||||||||||
Sbjct: 553 gtcgccttcaggagagtgccgtgcgtgaa 581
>gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 634
Score = 539 bits (272), Expect = e-151
Identities = 305/316 (96%)
Strand = Plus / Plus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcgg 129
|||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 38 caggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcgg 97
Query: 130 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 157
Query: 190 gcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttct 249
||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158 gcgacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttct 217
Query: 250 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 309
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 218 gccctcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcggccgc 277
Query: 310 acttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgc 369
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 278 acttcgacatggccgagcccgccttcctccacatcgcgcagtaccgcgccggcatcgtgc 337
Query: 370 ccgtcgcgttcaggag 385
||||||| ||||||||
Sbjct: 338 ccgtcgccttcaggag 353
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 535 bits (270), Expect = e-150
Identities = 303/314 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 243 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 302
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 362
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 363 gacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 422
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 423 cctcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcggccgcac 482
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 483 ttcgacatggccgagcccgccttcctccacatcgcgcagtaccgcgccggcatcgtgccc 542
Query: 372 gtcgcgttcaggag 385
||||| ||||||||
Sbjct: 543 gtcgccttcaggag 556
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 533 bits (269), Expect = e-149
Identities = 317/333 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 207 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 266
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 267 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 326
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 327 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 386
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 446
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 447 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 506
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaag 404
||||| | |||||| ||||||||||||||||||
Sbjct: 507 gtcgcctacaggagggtgccgtgcgtgaagaag 539
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 533 bits (269), Expect = e-149
Identities = 317/333 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 210 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 269
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 270 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 329
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 330 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 389
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 449
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 450 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 509
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaag 404
||||| | |||||| ||||||||||||||||||
Sbjct: 510 gtcgcctacaggagggtgccgtgcgtgaagaag 542
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 533 bits (269), Expect = e-149
Identities = 320/337 (94%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 209 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 268
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 269 ctgagcacggcgctgttcaacggcggcgcggcgtgcgggtcctgctacgagctgcgctgc 328
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 388
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 448
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 449 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 508
Query: 372 gtcgcgttcaggagagtgccgtgcgtgaagaagggcg 408
||||| | |||||| ||||||||||||||||||||||
Sbjct: 509 gtcgcctacaggagggtgccgtgcgtgaagaagggcg 545
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 531 bits (268), Expect = e-149
Identities = 328/348 (94%)
Strand = Plus / Plus
Query: 219 ggcaccatcaccgtcacggccaccaacttctgcccgcccaactacggcctccccagcgac 278
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggcaccatcaccgtgacggccaccaacttctgcccgcccaactacggcctccccagcgac 298
Query: 279 gacggcggctggtgcaacccgccgcgcccgcacttcgacatggccgagccggccttcctc 338
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 299 gacggcggctggtgcaacccgccgcgcccgcacttcgacatggcgcaaccggccttcctc 358
Query: 339 cgcatcgcgcagtaccgcgccggcatcgtgcccgtcgcgttcaggagagtgccgtgcgtg 398
| ||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||
Sbjct: 359 cagatcgcgcagtaccgcgccggcatcgtgcccgtcgcctacaggagggtgccatgcgtg 418
Query: 399 aagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtgctggtg 458
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 419 aagaagggcgggatccggttcaccatcaacggccactcctacttcaacctggtgctggtg 478
Query: 459 accaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcacgggg 518
||||||||||| |||||||| ||||||| |||||||||||| ||||||| |||| |||
Sbjct: 479 accaacgtggccggcgccggggacgtgcagtccgtctccatcaagggctccagcaccggg 538
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcg 566
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tggcagcccatgtcccggaactggggccagaactggcagagcaactcg 586
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcac 118
|||||||| || |||||||| ||| ||||||||||||||||||||||
Sbjct: 197 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcac 243
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 523 bits (264), Expect = e-146
Identities = 312/328 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 221 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 280
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 281 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 340
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 341 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 400
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 460
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 461 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 520
Query: 372 gtcgcgttcaggagagtgccgtgcgtga 399
||||| | |||||| |||||||||||||
Sbjct: 521 gtcgcctacaggagggtgccgtgcgtga 548
>gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 509 bits (257), Expect = e-142
Identities = 287/297 (96%)
Strand = Plus / Plus
Query: 89 cggcaacctgtacagcacggggtacggcacgagcacggcggcgctgagcacggcgctgtt 148
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 9 cggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgtt 68
Query: 149 caacgacggcgcggcgtgcgggtcctgctacgagctgcggtgcgacaacgacgggcggtg 208
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 69 caacgacggcgcggcgtgcgggtcctgctacgagctgcggtgcgacaacgccgggcggtc 128
Query: 209 gtgcctgccgggcaccatcaccgtcacggccaccaacttctgcccgcccaactacggcct 268
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 129 gtgcctgccgggcaccatcaccgtgacggccaccaacttctgccctcccaactacggcct 188
Query: 269 ccccagcgacgacggcggctggtgcaacccgccgcgcccgcacttcgacatggccgagcc 328
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 189 ccccagcgacgacggcggctggtgcaacccgccgcggccgcacttcgacatggccgagcc 248
Query: 329 ggccttcctccgcatcgcgcagtaccgcgccggcatcgtgcccgtcgcgttcaggag 385
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 249 cgccttcctccacatcgcgcagtaccgcgccggcatcgtgcccgtcgccttcaggag 305
>gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 550
Score = 507 bits (256), Expect = e-142
Identities = 301/316 (95%)
Strand = Plus / Plus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcgg 129
|||||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||
Sbjct: 93 caggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcgg 152
Query: 130 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 153 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgct 212
Query: 190 gcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttct 249
||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 213 gcgacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttct 272
Query: 250 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 332
Query: 310 acttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgc 369
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 333 acttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgc 392
Query: 370 ccgtcgcgttcaggag 385
||||||| | ||||||
Sbjct: 393 ccgtcgcctacaggag 408
>gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i03, DNA
sequence
Length = 641
Score = 507 bits (256), Expect = e-142
Identities = 301/316 (95%)
Strand = Plus / Minus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcgg 129
|||||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||
Sbjct: 542 caggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcgg 483
Query: 130 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 482 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgct 423
Query: 190 gcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttct 249
||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 422 gcgacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttct 363
Query: 250 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 303
Query: 310 acttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgc 369
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 302 acttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgc 243
Query: 370 ccgtcgcgttcaggag 385
||||||| | ||||||
Sbjct: 242 ccgtcgcctacaggag 227
>gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d01, DNA
sequence
Length = 642
Score = 507 bits (256), Expect = e-142
Identities = 301/316 (95%)
Strand = Plus / Minus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcgg 129
|||||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||
Sbjct: 346 caggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcgg 287
Query: 130 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 286 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgct 227
Query: 190 gcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttct 249
||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 226 gcgacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttct 167
Query: 250 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgc 107
Query: 310 acttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgc 369
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 106 acttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgc 47
Query: 370 ccgtcgcgttcaggag 385
||||||| | ||||||
Sbjct: 46 ccgtcgcctacaggag 31
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 507 bits (256), Expect = e-142
Identities = 310/328 (94%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 214 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 273
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 274 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 333
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 334 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 393
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 453
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtgccc 371
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 454 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtgccc 513
Query: 372 gtcgcgttcaggagagtgccgtgcgtga 399
||||| | |||| |||||||||||||
Sbjct: 514 gtcgcctacagggaggtgccgtgcgtga 541
>gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499499, DNA
sequence
Length = 624
Score = 494 bits (249), Expect = e-138
Identities = 301/317 (94%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacgggg-tacggcacgagcacggcg 128
|||||||||| || |||||||| ||| |||||||||||||| |||||||||| |||||||
Sbjct: 618 caggcggcgcgtgtgggtacgggaacatgtacagcacgggggtacggcacgaacacggcg 559
Query: 129 gcgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgg 188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgc 499
Query: 189 tgcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttc 248
|||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 tgcgacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttc 439
Query: 249 tgcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccg 379
Query: 309 cacttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcatcgtg 368
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 378 cacttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcatcgtg 319
Query: 369 cccgtcgcgttcaggag 385
|||||||| | ||||||
Sbjct: 318 cccgtcgcctacaggag 302
>gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137329, DNA
sequence
Length = 593
Score = 488 bits (246), Expect = e-136
Identities = 291/306 (95%)
Strand = Plus / Plus
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 313
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 314 aacctggtgctggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccgg 373
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 374 ggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactggcagagcaac 433
Query: 564 tcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtc 623
|| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 434 gcggacctggacgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtc 493
Query: 624 accagcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccag 683
||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 494 accagcaacaacgccgcccccgccggatggcagttcggccagaccttcgagggcgcccag 553
Query: 684 ttctga 689
||||||
Sbjct: 554 ttctga 559
>gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 692
Score = 488 bits (246), Expect = e-136
Identities = 291/306 (95%)
Strand = Plus / Minus
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 441
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 440 aacctggtgctggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccgg 381
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 380 ggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactggcagagcaac 321
Query: 564 tcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtc 623
|| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcggacctggacgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtc 261
Query: 624 accagcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccag 683
||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 260 accagcaacaacgccgcccccgccggatggcagttcggccagaccttcgagggcgcccag 201
Query: 684 ttctga 689
||||||
Sbjct: 200 ttctga 195
>gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 766
Score = 480 bits (242), Expect = e-133
Identities = 290/306 (94%)
Strand = Plus / Minus
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 339
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 338 aacctggtgctggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccgg 279
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 278 ggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactggcagagcaac 219
Query: 564 tcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtc 623
|| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 218 gcggacctggacgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtc 159
Query: 624 accagcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccag 683
||||||||| ||||| ||||||||| ||||||||||||||||||||||||| || ||||
Sbjct: 158 accagcaacaacgccgcccccgccggatggcagttcggccagaccttcgaggacgcccag 99
Query: 684 ttctga 689
||||||
Sbjct: 98 ttctga 93
>gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_A06_A002 5', mRNA sequence
Length = 520
Score = 478 bits (241), Expect = e-133
Identities = 280/293 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 228 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 287
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 288 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 347
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 348 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 407
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 467
Query: 312 ttcgacatggccgagccggccttcctccgcatcgcgcagtaccgcgccggcat 364
||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 468 ttcgacatggcgcagccggccttcctccagatcgcgcagtaccgcgccggcat 520
>gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070m01, DNA
sequence
Length = 339
Score = 472 bits (238), Expect = e-131
Identities = 289/306 (94%)
Strand = Plus / Plus
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 72
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 73 aacctggtgctggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccgg 132
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 133 ggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactggcagagcaac 192
Query: 564 tcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtc 623
|| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcggacctggaccggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtc 252
Query: 624 accagcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccag 683
||||||||| ||||| ||||||||| |||||| ||||||| ||||||||||||| ||||
Sbjct: 253 accagcaacaacgccgcccccgccggatggcagctcggccataccttcgagggcgcccag 312
Query: 684 ttctga 689
||||||
Sbjct: 313 ttctga 318
>gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519350, DNA
sequence
Length = 558
Score = 468 bits (236), Expect = e-130
Identities = 281/296 (94%)
Strand = Plus / Plus
Query: 394 gcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtgc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtgc 60
Query: 454 tggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgca 513
|||||||||||||||||||||| || |||||||| |||||||||||||||||||| || |
Sbjct: 61 tggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccggggctcgcgga 120
Query: 514 cggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctgg 573
||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||
Sbjct: 121 cggggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcggacctgg 180
Query: 574 acaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacg 633
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaaca 240
Query: 634 gcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttctga 689
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 acgccgcccccgccggatggcagttcggccagaccttcgagggcgcccagttctga 296
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcgctatgctgaggctgctaatctagcacccgcctag 549
>gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 673
Score = 466 bits (235), Expect = e-129
Identities = 280/295 (94%)
Strand = Plus / Plus
Query: 395 cgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtgct 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtgct 60
Query: 455 ggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcac 514
||||||||||||||||||||| || |||||||| |||||||||||||||||||| || ||
Sbjct: 61 ggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccggggctcgcggac 120
Query: 515 ggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctgga 574
|||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||
Sbjct: 121 ggggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcggacctgga 180
Query: 575 caggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacgg 634
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacaa 240
Query: 635 cgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttctga 689
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 cgccgcccccgccggatggcagttcggccagaccttcgagggcgcccagttctga 295
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcgctatgctgaggctgctaatctagcacccgcctag 549
>gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 448 bits (226), Expect = e-124
Identities = 255/265 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 244 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 303
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 363
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 364 gacaacgccnggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 423
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 424 cctcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcggccgcac 483
Query: 312 ttcgacatggccgagccggccttcc 336
||||||||||||||||| |||||||
Sbjct: 484 ttcgacatggccgagcccgccttcc 508
>gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D09_A002 5', mRNA sequence
Length = 779
Score = 426 bits (215), Expect = e-117
Identities = 242/251 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 528 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 587
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 588 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 647
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 648 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 707
Query: 252 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 ccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgcccgcac 767
Query: 312 ttcgacatggc 322
|||||||||||
Sbjct: 768 ttcgacatggc 778
>gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 3', mRNA sequence
Length = 681
Score = 424 bits (214), Expect = e-117
Identities = 265/282 (93%)
Strand = Plus / Plus
Query: 408 ggcatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtg 60
Query: 468 gcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcacggggtggcagccc 527
|||||||| || |||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 61 gcgggcgcgggggacgtgcggtccgtctccatccggggctcgcggacggggtggcagccc 120
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
||||| ||||| |||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 121 atgtcgcggaattggggccagaactggcagagcaacgcggacctggacgggcaggcgctg 180
Query: 588 tcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgccgtccccgcc 647
||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 181 tcgttccaggtcacctccagcgacggccgcaccgtcaccagcaacaacgccgcccccgcc 240
Query: 648 ggctggcagttcggccagaccttcgagggcggccagttctga 689
|| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 ggatggcagttcggccagaccttcgagggcgcccagttctga 282
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcgctatgctgaggctgctaatctagcacccgcctag 536
>gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 664
Score = 422 bits (213), Expect = e-116
Identities = 258/273 (94%)
Strand = Plus / Plus
Query: 417 ttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtggcgggcgcc 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgtggcgggcgcg 60
Query: 477 ggcgacgtgcgctccgtctccatccggggctcccgcacggggtggcagcccatgtcccgg 536
|| |||||||| |||||||||||||||||||| || |||||||||||||||||||| |||
Sbjct: 61 ggggacgtgcggtccgtctccatccggggctcgcggacggggtggcagcccatgtcgcgg 120
Query: 537 aactggggccagaactggcagagcaactcgtacctggacaggcaggcgctctcgttccag 596
||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||
Sbjct: 121 aactggggccagaactggcagagcaacgcggacctggacgggcaggcgctgtcgttccag 180
Query: 597 gtcaccgccagcgacggccgcaccgtcaccagcaacggcgccgtccccgccggctggcag 656
|||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||
Sbjct: 181 gtcaccgccagcgacggccgcaccgtcaccagcaacaacgccgcccccgccggatggcag 240
Query: 657 ttcggccagaccttcgagggcggccagttctga 689
|||||||||||||||||||||| ||||||||||
Sbjct: 241 ttcggccagaccttcgagggcgcccagttctga 273
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcgctatgctgaggctgctaatctagcacccgcctag 527
>gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 715
Score = 398 bits (201), Expect = e-109
Identities = 276/301 (91%)
Strand = Plus / Minus
Query: 387 gtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaac 446
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 476 gtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggccactcctacttcaac 417
Query: 447 ctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggc 506
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 416 ctggtgctggtgaccaacgtggccggcgccggggacgtgcagtccgtctccatcaagggc 357
Query: 507 tcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 566
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 297
Query: 567 tacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcacc 626
||| ||| | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcacc 237
Query: 627 agcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttc 686
|||||||||| || || || ||||||||||||||||||||||||||||||| |||||||
Sbjct: 236 agcaacggcgtcgcgccggcgggctggcagttcggccagaccttcgagggcgcccagttc 177
Query: 687 t 687
|
Sbjct: 176 t 176
>gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 719
Score = 398 bits (201), Expect = e-109
Identities = 276/301 (91%)
Strand = Plus / Plus
Query: 387 gtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaac 446
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 405 gtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggccactcctacttcaac 464
Query: 447 ctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggc 506
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 465 ctggtgctggtgaccaacgtggccggcgccggggacgtgcagtccgtctccatcaagggc 524
Query: 507 tcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 566
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 584
Query: 567 tacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcacc 626
||| ||| | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcacc 644
Query: 627 agcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttc 686
|||||||||| || || || ||||||||||||||||||||||||||||||| |||||||
Sbjct: 645 agcaacggcgtcgcgccggcgggctggcagttcggccagaccttcgagggcgcccagttc 704
Query: 687 t 687
|
Sbjct: 705 t 705
>gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 503
Score = 375 bits (189), Expect = e-102
Identities = 273/301 (90%)
Strand = Plus / Minus
Query: 387 gtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaac 446
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 453 gtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggccactcttacttcaac 394
Query: 447 ctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggc 506
||||||||||||||||||||||| |||||||| |||| | | ||||||||||| ||||
Sbjct: 393 ctggtgctggtgaccaacgtggccggcgccggggacgcccaccccgtctccatcaagggc 334
Query: 507 tcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 566
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcg 274
Query: 567 tacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcacc 626
||| ||| | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcacc 214
Query: 627 agcaacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttc 686
|||||||||| || || || ||||||||||||||||||||||||||||||| |||||||
Sbjct: 213 agcaacggcgtcgcgccggcgggctggcagttcggccagaccttcgagggcgcccagttc 154
Query: 687 t 687
|
Sbjct: 153 t 153
>gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 444
Score = 343 bits (173), Expect = 2e-092
Identities = 194/201 (96%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 244 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 303
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 363
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 364 gacaacgccgggcggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 423
Query: 252 ccgcccaactacggcctcccc 272
|| ||||||||||||||||||
Sbjct: 424 cctcccaactacggcctcccc 444
>gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 3', mRNA sequence
Length = 731
Score = 341 bits (172), Expect = 8e-092
Identities = 253/280 (90%)
Strand = Plus / Plus
Query: 406 gcggcatccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacg 465
|||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1 gcgggatccggttcaccatcaacggccactcctatttcaacctggtgctggtgaccaacg 60
Query: 466 tggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcacggggtggcagc 525
|||| |||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||
Sbjct: 61 tggccggcgccggggacgtgcagtccgtctccatcaagggctccagcaccgggtggcagc 120
Query: 526 ccatgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgc 585
||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||| |
Sbjct: 121 ccatgtcccggaactggggccagaactggcagagcaactcgctcctcgacggccagagcc 180
Query: 586 tctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgccgtccccg 645
|||| || ||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct: 181 tctcctttcaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgtcgcgccgg 240
Query: 646 ccggctggcagttcggccagaccttcgagggcggccagtt 685
| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 cgggctggcagttcggccagaccttcgagggcgcccagtt 280
>gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159265, DNA
sequence
Length = 627
Score = 339 bits (171), Expect = 3e-091
Identities = 216/231 (93%)
Strand = Plus / Minus
Query: 459 accaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcacgggg 518
||||||||||||||||| || |||||||| |||||||||||||||||||| || ||||||
Sbjct: 627 accaacgtggcgggcgcgggggacgtgcggtccgtctccatccggggctcgcggacgggg 568
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
|||||||||||||| |||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 567 tggcagcccatgtcgcggaactggggccagaactggcagagcaacgcggacctggacggg 508
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgcc 638
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 507 caggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacaacgcc 448
Query: 639 gtccccgccggctggcagttcggccagaccttcgagggcggccagttctga 689
| ||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 447 gcccccgccggatggcagttcggccagaccttcgagggcgcccagttctga 397
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 179 gcgctatgctgaggctgctaatctagcacccgcctag 143
>gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 762
Score = 331 bits (167), Expect = 7e-089
Identities = 194/203 (95%)
Strand = Plus / Plus
Query: 384 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agagtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttc 617
Query: 444 aacctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccgg 503
|||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 618 aacctggtgctggtgaccaacgtggcgggcgcgggggacgtgcggtccgtctccatccgg 677
Query: 504 ggctcccgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 678 ggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactggcagagcaac 737
Query: 564 tcgtacctggacaggcaggcgct 586
|| |||||||| ||||||||||
Sbjct: 738 gcggacctggacgggcaggcgct 760
Score = 147 bits (74), Expect = 2e-033
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 296 cccgccgcgcccgcacttcgacatggccgagccggccttcctccgcatcgcgcagtaccg 355
||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1 cccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtaccg 60
Query: 356 cgccggcatcgtgcccgtcgcgttcaggag 385
||||||||||||||||||||| ||||||||
Sbjct: 61 cgccggcatcgtgcccgtcgccttcaggag 90
>gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_23_G06_A002 5', mRNA sequence
Length = 443
Score = 331 bits (167), Expect = 7e-089
Identities = 194/203 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 241 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 300
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 360
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 420
Query: 252 ccgcccaactacggcctccccag 274
|||||||||||||||||||||||
Sbjct: 421 ccgcccaactacggcctccccag 443
>gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 411
Score = 327 bits (165), Expect = 1e-087
Identities = 192/201 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||||
Sbjct: 211 ggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcggcg 270
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 271 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgctgc 330
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 gacaacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 390
Query: 252 ccgcccaactacggcctcccc 272
|||||||||||||||||||||
Sbjct: 391 ccgcccaactacggcctcccc 411
>gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f237l21, DNA
sequence
Length = 522
Score = 325 bits (164), Expect = 5e-087
Identities = 228/248 (91%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 387 gtgccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaac 446
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 275 gtgccgtgcgtgaagaagggcgggatccggttcaccatcaacggccactcctacttcaac 334
Query: 447 ctggtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggc 506
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 335 ctggtgctggtgaccaacgtggccggcgccggggacgtgcagtccgtctccatcaagggc 394
Query: 507 tcccgcacggggtggcagcccatgtcccggaactggggccagaact-ggcagagcaactc 565
||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 395 tccagcaccgggtggcagcccatgtcccggaactggggccagaactgggcagagcaactc 454
Query: 566 gtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcac 625
| ||| ||| ||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 455 gctcctcgacgggcagagcctctccttccaggtcaccgccagcgacgggcgcaccgtcac 514
Query: 626 cagcaacg 633
||||||||
Sbjct: 515 cagcaacg 522
>gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 437
Score = 309 bits (156), Expect = 3e-082
Identities = 180/188 (95%)
Strand = Plus / Plus
Query: 72 ggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcggcg 131
|||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 250 ggcggcgcgtgcgggtacggcaacctgtacagcaccgggtacggcacgaacacggcggcg 309
Query: 132 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggtgc 369
Query: 192 gacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttctgc 251
||||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 370 gacaacgccgggaggtcgtgcctgccgggcaccatcaccgtgacggccaccaacttctgc 429
Query: 252 ccgcccaa 259
|| |||||
Sbjct: 430 cctcccaa 437
>gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 576
Score = 291 bits (147), Expect = 6e-077
Identities = 183/195 (93%)
Strand = Plus / Plus
Query: 495 tccatccggggctcccgcacggggtggcagcccatgtcccggaactggggccagaactgg 554
|||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 tccatccggggctcgcggacggggtggcagcccatgtcgcggaactggggccagaactgg 60
Query: 555 cagagcaactcgtacctggacaggcaggcgctctcgttccaggtcaccgccagcgacggc 614
||||||||| || |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 61 cagagcaacgcggacctggacgggcaggcgctgtcgttccaggtcaccgccagcgacggc 120
Query: 615 cgcaccgtcaccagcaacggcgccgtccccgccggctggcagttcggccagaccttcgag 674
|||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 121 cgcaccgtcaccagcaacaacgccgcccccgccggatggcagttcggccagaccttcgag 180
Query: 675 ggcggccagttctga 689
|||| ||||||||||
Sbjct: 181 ggcgcccagttctga 195
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcgctatgctgaggctgctaatctagcacccgcctag 444
>gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 3', mRNA sequence
Length = 699
Score = 289 bits (146), Expect = 3e-076
Identities = 215/238 (90%)
Strand = Plus / Plus
Query: 450 gtgctggtgaccaacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcc 509
|||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||
Sbjct: 1 gtgctggtgaccaacgtggccggcgccggggacgtgcagtccgtctccatcaagggctcc 60
Query: 510 cgcacggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtac 569
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 agcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctc 120
Query: 570 ctggacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagc 629
|| ||| | ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcaccgtcaccagc 180
Query: 630 aacggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttct 687
||||||| || || || ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 aacggcgtcgcgccggcgggctggcagttcggccagaccttcgagggcgcccagttct 238
>gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499499, DNA
sequence
Length = 747
Score = 283 bits (143), Expect = 2e-074
Identities = 173/183 (94%)
Strand = Plus / Plus
Query: 70 caggcggcgcctgcgggtacggcaacctgtacagcacggggtacggcacgagcacggcgg 129
|||||||||| || |||||||| ||| |||||||||||||||||||||||| ||||||||
Sbjct: 565 caggcggcgcgtgtgggtacgggaacatgtacagcacggggtacggcacgaacacggcgg 624
Query: 130 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcggt 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 cgctgagcacggcgctgttcaacgacggcgcggcgtgcgggtcctgctacgagctgcgct 684
Query: 190 gcgacaacgacgggcggtggtgcctgccgggcaccatcaccgtcacggccaccaacttct 249
||||| ||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 685 gcgaccacgacgggcagtcgtgcctgccgggcaccatcaccgtgacggccaccaacttct 744
Query: 250 gcc 252
|||
Sbjct: 745 gcc 747
>gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 577
Score = 272 bits (137), Expect = 6e-071
Identities = 167/177 (94%)
Strand = Plus / Plus
Query: 513 acggggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctg 572
|||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||
Sbjct: 8 acggggtggcagcccatgtcgcggaactggggccagaactggcagagcaacgcggacctg 67
Query: 573 gacaggcaggcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaac 632
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gacgggcaggcgctgtcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaac 127
Query: 633 ggcgccgtccccgccggctggcagttcggccagaccttcgagggcggccagttctga 689
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 128 aacgccgcccccgccggatggcagttcggccagaccttcgagggcgcccagttctga 184
Score = 73.8 bits (37), Expect = 3e-011
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 883 gcgctatgctgaggctgctaatctagcacccgcctag 919
|||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcgctatgctgaggctgctaatctagcacccgcctag 438
>gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F03_A002 3', mRNA sequence
Length = 680
Score = 266 bits (134), Expect = 4e-069
Identities = 203/226 (89%)
Strand = Plus / Plus
Query: 462 aacgtggcgggcgccggcgacgtgcgctccgtctccatccggggctcccgcacggggtgg 521
|||||||| |||||||| ||||||| |||||||||||| ||||||| |||| ||||||
Sbjct: 1 aacgtggccggcgccggggacgtgcagtccgtctccatcaagggctccagcaccgggtgg 60
Query: 522 cagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcag 581
||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||
Sbjct: 61 cagcccatgtcccggaactggggccagaactggcagagcaactcgctccttgacggccag 120
Query: 582 gcgctctcgttccaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgccgtc 641
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 agcctctccttccaggtcaccgccagcgacggccgcaccgtcaccagcaacggcgtcgcg 180
Query: 642 cccgccggctggcagttcggccagaccttcgagggcggccagttct 687
|| || ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 ccggcgggctggcagttcggccagaccttcgagggcgcccagttct 226
>gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 648
Score = 246 bits (124), Expect = 3e-063
Identities = 187/208 (89%)
Strand = Plus / Plus
Query: 480 gacgtgcgctccgtctccatccggggctcccgcacggggtggcagcccatgtcccggaac 539
||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||||||
Sbjct: 5 gacgtgcagtccgtctccatcaagggctccagcaccgggtggcagcccatgtcccggaac 64
Query: 540 tggggccagaactggcagagcaactcgtacctggacaggcaggcgctctcgttccaggtc 599
||||||||||||||||||||||||||| ||| ||| | ||| ||||| |||||||||
Sbjct: 65 tggggccagaactggcagagcaactcgctcctcgacggccagagcctctccttccaggtc 124
Query: 600 accgccagcgacggccgcaccgtcaccagcaacggcgccgtccccgccggctggcagttc 659
||||||||||||||||||||||||||||||||||||| || || || ||||||||||||
Sbjct: 125 accgccagcgacggccgcaccgtcaccagcaacggcgtcgcgccggcgggctggcagttc 184
Query: 660 ggccagaccttcgagggcggccagttct 687
||||||||||||||||||| ||||||||
Sbjct: 185 ggccagaccttcgagggcgcccagttct 212
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 343,195
Number of Sequences: 832831
Number of extensions: 343195
Number of successful extensions: 104025
Number of sequences better than 0.5: 252
Number of HSP's better than 0.5 without gapping: 251
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 103373
Number of HSP's gapped (non-prelim): 586
length of query: 1022
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1002
effective length of database: 474,703,049
effective search space: 475652455098
effective search space used: 475652455098
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)