BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665451.2.1
(911 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW184129.1|CW184129 104_600_11164988_116_36688_076 Sorgh... 565 e-159
gb|CX610183.1|CX610183 ANR1_17_D05.b1_A002 Anaerobic roots ... 551 e-155
gb|CX610269.1|CX610269 ANR1_17_D05.g1_A002 Anaerobic roots ... 531 e-149
gb|CD232685.1|CD232685 SS1_1_C02.b1_A012 Salt-stressed seed... 519 e-145
gb|CX622414.1|CX622414 GABR1_63_G05.g2_A002 GA- or brassino... 458 e-127
gb|CD429023.1|CD429023 ETH1_2_D06.b1_A002 Ethylene-treated ... 448 e-124
gb|CW165635.1|CW165635 104_574_11152613_148_36480_029 Sorgh... 446 e-123
gb|CD232788.1|CD232788 SS1_1_C02.g1_A012 Salt-stressed seed... 361 7e-098
gb|CD429152.1|CD429152 ETH1_2_D06.g1_A002 Ethylene-treated ... 361 7e-098
gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorgh... 196 3e-048
gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkali... 196 3e-048
gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkal... 196 3e-048
gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stres... 188 6e-046
gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots ... 188 6e-046
gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassino... 188 6e-046
gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorgh... 184 1e-044
gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1)... 184 1e-044
gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1... 184 1e-044
gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1... 184 1e-044
gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1)... 184 1e-044
gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) So... 184 1e-044
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 184 1e-044
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 184 1e-044
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 184 1e-044
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 184 1e-044
gb|CX609787.1|CX609787 ANR1_14_F01.g1_A002 Anaerobic roots ... 182 4e-044
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 133 3e-029
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 133 3e-029
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 133 3e-029
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 133 3e-029
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 133 3e-029
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 133 3e-029
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 133 3e-029
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 133 3e-029
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 133 3e-029
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 133 3e-029
gb|CW790974.1|CW790974 SP__Ba0075B22.r SP__Ba Sorghum propi... 127 2e-027
gb|CL183364.1|CL183364 104_395_10898123_114_31917_347 Sorgh... 109 5e-022
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 109 5e-022
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 109 5e-022
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 109 5e-022
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 100 4e-019
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 100 4e-019
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 96 7e-018
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 94 3e-017
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 94 3e-017
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 94 3e-017
gb|CW415526.1|CW415526 fsbb001f115k18f0 Sorghum methylation... 94 3e-017
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 94 3e-017
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 86 7e-015
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 86 7e-015
gb|AW286086.2|AW286086 LG1_261_C01.b1_A002 Light Grown 1 (L... 86 7e-015
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 86 7e-015
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 86 7e-015
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 86 7e-015
gb|CN138525.1|CN138525 OX1_64_G04.b1_A002 Oxidatively-stres... 86 7e-015
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 86 7e-015
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 80 4e-013
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 80 4e-013
gb|CW218305.1|CW218305 104_651_11196114_148_37458_065 Sorgh... 80 4e-013
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 80 4e-013
gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stres... 80 4e-013
gb|CN135950.1|CN135950 OX1_39_H10.g1_A002 Oxidatively-stres... 80 4e-013
gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BG411605.1|BG411605 EM1_58_H08.b1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 76 6e-012
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 76 6e-012
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 76 6e-012
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 76 6e-012
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 76 6e-012
gb|BE355802.1|BE355802 DG1_11_E04.b1_A002 Dark Grown 1 (DG1... 76 6e-012
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 74 3e-011
gb|CW304181.1|CW304181 104_789_11465646_116_35704_031 Sorgh... 74 3e-011
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 74 3e-011
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 74 3e-011
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 72 1e-010
gb|CW256509.1|CW256509 104_721_11226831_148_35142_054 Sorgh... 72 1e-010
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 72 1e-010
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 72 1e-010
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 72 1e-010
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 72 1e-010
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 72 1e-010
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 72 1e-010
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 72 1e-010
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 72 1e-010
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 72 1e-010
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 72 1e-010
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 72 1e-010
gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated... 70 4e-010
gb|BE357599.1|BE357599 DG1_21_C03.b1_A002 Dark Grown 1 (DG1... 68 2e-009
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 68 2e-009
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 68 2e-009
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 68 2e-009
gb|CN134067.1|CN134067 OX1_20_B11.b1_A002 Oxidatively-stres... 68 2e-009
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 66 6e-009
gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorgh... 66 6e-009
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 66 6e-009
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 66 6e-009
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 66 6e-009
gb|BZ345790.1|BZ345790 ht57a10.b1 WGS-SbicolorF (JM107 adap... 64 2e-008
gb|CW032162.1|CW032162 104_261_10501223_114_30363 Sorghum m... 64 2e-008
gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorgh... 64 2e-008
gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorgh... 64 2e-008
gb|CW323788.1|CW323788 104_818_11476816_148_35907_062 Sorgh... 64 2e-008
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 64 2e-008
gb|CW500124.1|CW500124 fsbb001f295e09k0 Sorghum methylation... 64 2e-008
gb|BE125495.1|BE125495 DG1_27_A01.b1_A002 Dark Grown 1 (DG1... 64 2e-008
gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1... 64 2e-008
gb|CD219557.1|CD219557 CCC1_57_E04.g1_A007 Callus culture/c... 64 2e-008
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 64 2e-008
gb|CD229233.1|CD229233 CCC1_13_F08.g1_A007 Callus culture/c... 64 2e-008
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 64 2e-008
gb|CW415527.1|CW415527 fsbb001f115k18k0 Sorghum methylation... 62 1e-007
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 60 4e-007
gb|CL187928.1|CL187928 104_404_10901237_114_32442_031 Sorgh... 58 1e-006
gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorgh... 58 1e-006
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 58 1e-006
gb|CW252632.1|CW252632 104_715_11224618_116_35095_033 Sorgh... 58 1e-006
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 58 1e-006
gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 58 1e-006
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 58 1e-006
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 58 1e-006
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 58 1e-006
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 58 1e-006
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 58 1e-006
gb|CN142345.1|CN142345 WOUND1_9_A01.g1_A002 Wounded leaves ... 58 1e-006
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 58 1e-006
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 58 1e-006
gb|BZ332712.1|BZ332712 hx30b08.b1 WGS-SbicolorF (JM107 adap... 56 6e-006
gb|CW096875.1|CW096875 104_462_11002137_116_34348_035 Sorgh... 56 6e-006
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 56 6e-006
gb|CW174399.1|CW174399 104_586_11157384_148_36560_088 Sorgh... 56 6e-006
gb|CW198655.1|CW198655 104_623_11183089_148_36841_007 Sorgh... 56 6e-006
gb|CW204527.1|CW204527 104_632_11186589_148_36922_087 Sorgh... 56 6e-006
gb|CW206972.1|CW206972 104_635_11187869_148_36965_017 Sorgh... 56 6e-006
gb|CW255364.1|CW255364 104_720_11226195_148_35134_016 Sorgh... 56 6e-006
gb|CW310091.1|CW310091 104_799_11469537_116_35745_045 Sorgh... 56 6e-006
gb|CW416582.1|CW416582 fsbb001f117d07f0 Sorghum methylation... 56 6e-006
gb|CW459138.1|CW459138 fsbb001f205l22f0 Sorghum methylation... 56 6e-006
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 56 6e-006
gb|CW493277.1|CW493277 fsbb001f283p16f0 Sorghum methylation... 56 6e-006
gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorgh... 54 2e-005
gb|CW173031.1|CW173031 104_584_11156623_116_36545_024 Sorgh... 54 2e-005
gb|CW177867.1|CW177867 104_591_11159260_116_36614_010 Sorgh... 54 2e-005
gb|CW226216.1|CW226216 104_664_11204768_116_37222_030 Sorgh... 54 2e-005
gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorgh... 54 2e-005
gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation... 54 2e-005
gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sor... 54 2e-005
gb|BM323139.1|BM323139 PIC1_8_B06.b1_A002 Pathogen-infected... 54 2e-005
gb|BM323592.1|BM323592 PIC1_21_B02.b1_A002 Pathogen-infecte... 54 2e-005
gb|CL172252.1|CL172252 104_374_10890016_116_31775_304 Sorgh... 52 9e-005
gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum m... 52 9e-005
gb|CW068471.1|CW068471 104_317_10525139_1_30096 Sorghum met... 52 9e-005
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 52 9e-005
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 52 9e-005
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 52 9e-005
gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorgh... 52 9e-005
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 52 9e-005
gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1)... 52 9e-005
gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1)... 52 9e-005
gb|BE125309.1|BE125309 DG1_19_A01.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BE125671.1|BE125671 DG1_54_E06.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 52 9e-005
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 52 9e-005
gb|CW116303.1|CW116303 104_491_11107038_148_34597_017 Sorgh... 50 4e-004
gb|CW218492.1|CW218492 104_652_11196219_116_37460_014 Sorgh... 50 4e-004
gb|CW279627.1|CW279627 104_754_11407179_148_35439_008 Sorgh... 50 4e-004
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 50 4e-004
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 50 4e-004
gb|CW446759.1|CW446759 fsbb001f179j05f0 Sorghum methylation... 50 4e-004
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 50 4e-004
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 50 4e-004
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 50 4e-004
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 50 4e-004
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 50 4e-004
gb|CW157340.1|CW157340 104_560_11147178_148_36385_069 Sorgh... 48 0.001
gb|CW279626.1|CW279626 104_754_11407179_116_35435_008 Sorgh... 48 0.001
gb|CW477983.1|CW477983 fsbb001f235j18f0 Sorghum methylation... 48 0.001
gb|BG558048.1|BG558048 RHIZ2_66_A02.g1_A003 Rhizome2 (RHIZ2... 48 0.001
gb|CN124218.1|CN124218 RHOH1_3_G12.b1_A002 Acid- and alkali... 48 0.001
gb|CN125891.1|CN125891 RHOH1_14_A10.b1_A002 Acid- and alkal... 48 0.001
gb|CN141484.1|CN141484 OX1_52_A06.b1_A002 Oxidatively-stres... 48 0.001
gb|CN149135.1|CN149135 WOUND1_61_A02.b1_A002 Wounded leaves... 48 0.001
gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from s... 48 0.001
gb|CX622438.1|CX622438 GABR1_64_A06.b2_A002 GA- or brassino... 48 0.001
gb|BZ341024.1|BZ341024 ic42f05.b1 WGS-SbicolorF (JM107 adap... 46 0.006
gb|CL173618.1|CL173618 104_377_10891001_148_31792_137 Sorgh... 46 0.006
gb|CL190412.1|CL190412 104_408_10906068_114_32486_040 Sorgh... 46 0.006
gb|CW496603.1|CW496603 fsbb001f288o23k0 Sorghum methylation... 46 0.006
gb|AW671936.1|AW671936 LG1_353_D11.b1_A002 Light Grown 1 (L... 46 0.006
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 44 0.022
gb|CL175363.1|CL175363 104_380_10892393_148_31766_377 Sorgh... 44 0.022
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 44 0.022
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 44 0.022
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 44 0.022
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 44 0.022
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 44 0.022
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 44 0.022
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 44 0.022
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 44 0.022
gb|CW238006.1|CW238006 104_694_11216489_116_37395_069 Sorgh... 44 0.022
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 44 0.022
gb|CW292080.1|CW292080 104_772_11413895_116_35577_096 Sorgh... 44 0.022
gb|CW292718.1|CW292718 104_772_11414235_116_35579_002 Sorgh... 44 0.022
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 44 0.022
gb|CW459139.1|CW459139 fsbb001f205l22k0 Sorghum methylation... 44 0.022
gb|CW486287.1|CW486287 fsbb001f249h09f0 Sorghum methylation... 44 0.022
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 44 0.022
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 44 0.022
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 44 0.022
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 44 0.022
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 44 0.022
gb|CD222138.1|CD222138 CCC1_2_E09.b1_A007 Callus culture/ce... 44 0.022
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 44 0.022
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 44 0.022
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 44 0.022
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 44 0.022
gb|CN135542.1|CN135542 OX1_37_B02.g1_A002 Oxidatively-stres... 44 0.022
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 42 0.088
gb|CW067692.1|CW067692 104_315_10524451_114_30124 Sorghum m... 42 0.088
gb|CW139435.1|CW139435 104_529_11135236_148_34909_006 Sorgh... 42 0.088
gb|CW141973.1|CW141973 104_533_11136596_116_34937_078 Sorgh... 42 0.088
gb|CW203319.1|CW203319 104_629_11185572_116_36913_034 Sorgh... 42 0.088
gb|CW311029.1|CW311029 104_800_11470021_116_35753_057 Sorgh... 42 0.088
gb|CW370295.1|CW370295 fsbb001f045c09f0 Sorghum methylation... 42 0.088
gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation... 42 0.088
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 42 0.088
gb|AW924966.1|AW924966 WS1_73_G01.b1_A002 Water-stressed 1 ... 42 0.088
gb|BE125754.1|BE125754 DG1_55_H06.b1_A002 Dark Grown 1 (DG1... 42 0.088
gb|BE356065.1|BE356065 DG1_122_C07.b1_A002 Dark Grown 1 (DG... 42 0.088
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 42 0.088
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 42 0.088
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 42 0.088
gb|BG557624.1|BG557624 EM1_54_B10.g1_A002 Embryo 1 (EM1) So... 42 0.088
gb|BG557673.1|BG557673 EM1_55_A10.g1_A002 Embryo 1 (EM1) So... 42 0.088
gb|BG649436.1|BG649436 EM1_79_D06.b1_A002 Embryo 1 (EM1) So... 42 0.088
gb|BI098297.1|BI098297 IP1_30_F06.b1_A002 Immature pannicle... 42 0.088
gb|BM326072.1|BM326072 PIC1_65_D11.b1_A002 Pathogen-infecte... 42 0.088
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 42 0.088
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 42 0.088
gb|CF427390.1|CF427390 PH1_1_A12.b1_A002 Phosphorous-defici... 42 0.088
gb|CF485964.1|CF485964 POL1_34_G09.g1_A002 Pollen Sorghum b... 42 0.088
gb|CN124436.1|CN124436 RHOH1_4_F03.g1_A002 Acid- and alkali... 42 0.088
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 42 0.088
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 42 0.088
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 42 0.088
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 42 0.088
gb|CN139739.1|CN139739 OX1_23_G10.g1_A002 Oxidatively-stres... 42 0.088
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 42 0.088
gb|CN143653.1|CN143653 WOUND1_17_C08.g1_A002 Wounded leaves... 42 0.088
gb|CN143705.1|CN143705 WOUND1_17_H03.g1_A002 Wounded leaves... 42 0.088
gb|CN145297.1|CN145297 WOUND1_28_C01.b2_A002 Wounded leaves... 42 0.088
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 42 0.088
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 42 0.088
gb|CL160466.1|CL160466 104_351_10805010_116_31825_066 Sorgh... 40 0.35
gb|CL189256.1|CL189256 104_406_10902170_114_32470_009 Sorgh... 40 0.35
gb|CL193808.1|CL193808 104_417_10941186_116_32279_067 Sorgh... 40 0.35
gb|CW023423.1|CW023423 104_163_10432441_5_30009 Sorghum met... 40 0.35
gb|CW035320.1|CW035320 104_265_10503086_115_30379 Sorghum m... 40 0.35
gb|CW139438.1|CW139438 104_529_11135238_116_34905_021 Sorgh... 40 0.35
gb|CW238391.1|CW238391 104_695_11216705_148_37524_075 Sorgh... 40 0.35
gb|CW322727.1|CW322727 104_816_11476252_116_35954_006 Sorgh... 40 0.35
gb|CW386825.1|CW386825 fsbb001f070o12k0 Sorghum methylation... 40 0.35
gb|CW433014.1|CW433014 fsbb001f148a20f0 Sorghum methylation... 40 0.35
gb|CW457483.1|CW457483 fsbb001f203f04f0 Sorghum methylation... 40 0.35
gb|BE362589.1|BE362589 DG1_87_C06.g1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BG411467.1|BG411467 EM1_58_H08.g1_A002 Embryo 1 (EM1) So... 40 0.35
gb|BG556770.1|BG556770 EM1_38_D04.b1_A002 Embryo 1 (EM1) So... 40 0.35
gb|BE362928.2|BE362928 DG1_91_A07.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|CD430957.1|CD430957 ETH1_6_H02.b1_A002 Ethylene-treated ... 40 0.35
>gb|CW184129.1|CW184129 104_600_11164988_116_36688_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164988, DNA
sequence
Length = 699
Score = 565 bits (285), Expect = e-159
Identities = 375/405 (92%)
Strand = Plus / Minus
Query: 309 ttctgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtg 368
|||||||| ||||||||||||| || ||| |||||||| |||||||||||||||||||||
Sbjct: 424 ttctgggctgacttcatcgagaacaagcttaccaagccgttcttcatggcgatctgggtg 365
Query: 369 gaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctg 428
|||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 364 gaggagagcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctg 305
Query: 429 gaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtg 488
|||||||||||||| || |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 304 gaggcgcagctcgacggcaagaagttcttcgccggcgacagggcgggatacctcgacgtc 245
Query: 489 gccgcgtccgcgctcgggccctggcgcagcgtcatcgaggagctcaacggtgtggcgctg 548
||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 244 gccgcgtcctcgctcggcccctggcgcagcgtcatcgaggagctcaacggagtgaccgtg 185
Query: 549 ctcagcgaggatgaccaccccaacctgtgccggtggaccagggactactgcgccttcgag 608
||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 184 ctcagcgaggacgagcaccccaacctgtgccggtggagcagggactactgcgcctgcgag 125
Query: 609 gctctcaagccgtgcatgccggatcgggagaagctcctcgcctacttcactaagaacttc 668
| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 124 gatctgaagccgtgcatgccggatcgggagaagctgctcgcctacttcaccaagaacttc 65
Query: 669 gacaggtacaaggcggccgtcaatgcgacgctatcgcagtcgcag 713
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 64 gacaggtacaaggcggccgtcaatgcgacgttatcgcagtcgcag 20
Score = 321 bits (162), Expect = 6e-086
Identities = 214/230 (93%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 33 aagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctg 92
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aagctgatcgg-ttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctc 641
Query: 93 aaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctg 152
|| ||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||||
Sbjct: 640 aagggcgtgccgtacgagctcattctggaggacctcttcggcaccaagagcgacctccta 581
Query: 153 ctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcc 212
||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||
Sbjct: 580 ctccaccacaaccccgtccacaagaaggtccccgtgctcctccacggcgacgacagggcc 521
Query: 213 atctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 520 atctccgaatccctcgtcattgccgagtacgtcgacgaggtcttcgacgg 471
>gb|CX610183.1|CX610183 ANR1_17_D05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_D05_A002 3', mRNA sequence
Length = 677
Score = 551 bits (278), Expect = e-155
Identities = 371/402 (92%)
Strand = Plus / Plus
Query: 312 tgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtggag 371
||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||||||
Sbjct: 39 tgggctgacttcatcgagaacaagcttaccaagccgttcttcatggcgatctgggtggag 98
Query: 372 gagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctggag 431
||| |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 99 gagagcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctggag 158
Query: 432 gcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtggcc 491
||||||||||| || |||| ||||||||||||||||||| |||| |||||||| || |||
Sbjct: 159 gcgcagctcgacggcaagaagttcttcgccggcgacagggcgggatacctcgaggtcgcc 218
Query: 492 gcgtccgcgctcgggccctggcgcagcgtcatcgaggagctcaacggtgtggcgctgctc 551
|||||| ||||||| |||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 219 gcgtcctcgctcggcccctggcgcagcgtcatcgaggagctcaacggagtgaccgtgctc 278
Query: 552 agcgaggatgaccaccccaacctgtgccggtggaccagggactactgcgccttcgaggct 611
|||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct: 279 agcgaggacgagcaccccaacctgtgccggtggagcagggactactgcgcctgcgaggat 338
Query: 612 ctcaagccgtgcatgccggatcgggagaagctcctcgcctacttcactaagaacttcgac 671
|| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 339 ctgaagccgtgcatgccggatcgggagaagctgctcgcctacttcaccaagaacttcgac 398
Query: 672 aggtacaaggcggccgtcaatgcgacgctatcgcagtcgcag 713
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 399 aggtacaaggcggccgtcaatgcgacgttatcgcagtcgcag 440
Score = 44.1 bits (22), Expect = 0.022
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 781 ttcagaataacgtagctgtgcccagt 806
||||||||||||||| ||||||||||
Sbjct: 521 ttcagaataacgtagatgtgcccagt 546
>gb|CX610269.1|CX610269 ANR1_17_D05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_D05_A002 5', mRNA sequence
Length = 741
Score = 531 bits (268), Expect = e-149
Identities = 358/388 (92%)
Strand = Plus / Plus
Query: 309 ttctgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtg 368
|||||||| ||||||||||||| || ||| |||||||| |||||||||||||||||||||
Sbjct: 354 ttctgggctgacttcatcgagaacaagcttaccaagccgttcttcatggcgatctgggtg 413
Query: 369 gaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctg 428
|||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 414 gaggagagcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctg 473
Query: 429 gaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtg 488
|||||||||||||| || |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 474 gaggcgcagctcgacggcaagaagttcttcgccggcgacagggcgggatacctcgacgtc 533
Query: 489 gccgcgtccgcgctcgggccctggcgcagcgtcatcgaggagctcaacggtgtggcgctg 548
||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 534 gccgcgtcctcgctcggcccctggcgcagcgtcatcgaggagctcaacggagtgaccgtg 593
Query: 549 ctcagcgaggatgaccaccccaacctgtgccggtggaccagggactactgcgccttcgag 608
||||||||||| || |||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 594 ctcagcgaggacgagcaccccaacctgtgccggtggagcaaggactactgcgcctgcgag 653
Query: 609 gctctcaagccgtgcatgccggatcgggagaagctcctcgcctacttcactaagaacttc 668
| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 654 gatctgaagccgtgcatgccggatcgggagaagctgctcgcctacttcaccaagaacttc 713
Query: 669 gacaggtacaaggcggccgtcaatgcga 696
||||||||||||||||||||||||||||
Sbjct: 714 gacaggtacaaggcggccgtcaatgcga 741
Score = 361 bits (182), Expect = 7e-098
Identities = 227/242 (93%)
Strand = Plus / Plus
Query: 21 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 125
Query: 81 gcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaag 140
||||||||||| || ||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 126 gcgctgtgcctcaagggcgtgccgtacgagctcattctggaggacctcttcggcaccaag 185
Query: 141 agcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggc 200
||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 186 agcgacctcctactccaccacaaccccgtccacaagaaggtccccgtgctcctccacggc 245
Query: 201 gacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgac 260
|||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 246 gacgacagggccatctccgaatccctcgtcattgccgagtacgtcgacgaggtcttcgac 305
Query: 261 gg 262
||
Sbjct: 306 gg 307
>gb|CD232685.1|CD232685 SS1_1_C02.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_C02_A012 3', mRNA sequence
Length = 611
Score = 519 bits (262), Expect = e-145
Identities = 331/354 (93%)
Strand = Plus / Plus
Query: 360 atctgggtggaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtg 419
||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| |||
Sbjct: 1 atctgggtggaggagggcgaagcgcggctgcggttcgagaaggaggccaaggagctggtg 60
Query: 420 gcgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtac 479
||||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||
Sbjct: 61 gcgctgctggaggcgcagctcgacggcaagaagttcttcgccggcgacaggccgggatac 120
Query: 480 ctcgacgtggccgcgtccgcgctcgggccctggcgcagcgtcatcgaggagctcaacggt 539
|| ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 cttgacgtcgccgcgtcctcgctcggcccctggcgcagcgtcatcgaggagctcaacgga 180
Query: 540 gtggcgctgctcagcgaggatgaccaccccaacctgtgccggtggaccagggactactgc 599
||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||||
Sbjct: 181 gtgacgctgctcagcgaggacgagcaccccaacctgtgccggtggagcagggactactgc 240
Query: 600 gccttcgaggctctcaagccgtgcatgccggatcgggagaagctcctcgcctacttcact 659
|||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 gcctgcgaggatctgaagccgtgcatgccggatcgggagaagctgctcgcctacttcacc 300
Query: 660 aagaacttcgacaggtacaaggcggccgtcaatgcgacgctatcgcagtcgcag 713
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 aagaacttcgacaggtacaaggcggccgtcaatgcgacgttatcgcagtcgcag 354
Score = 44.1 bits (22), Expect = 0.022
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 781 ttcagaataacgtagctgtgcccagt 806
||||||||||||||| ||||||||||
Sbjct: 443 ttcagaataacgtagatgtgcccagt 468
>gb|CX622414.1|CX622414 GABR1_63_G05.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_G05_A002 5', mRNA sequence
Length = 693
Score = 458 bits (231), Expect = e-127
Identities = 315/343 (91%)
Strand = Plus / Plus
Query: 309 ttctgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtg 368
|||||||| ||||||||||||| || ||| |||||||| |||||||||||||||||||||
Sbjct: 351 ttctgggctgacttcatcgagaacaagcttaccaagccgttcttcatggcgatctgggtg 410
Query: 369 gaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctg 428
|||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 411 gaggagagcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctg 470
Query: 429 gaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtg 488
|||||||||||||| || |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 471 gaggcgcagctcgacggcaagaagttcttcgccggcgacagggcgggatacctcgacgtc 530
Query: 489 gccgcgtccgcgctcgggccctggcgcagcgtcatcgaggagctcaacggtgtggcgctg 548
||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 531 gccgcgtcctcgctcggcccctggcgcagcgtcatcgaggagctcaacggagtgaccgtg 590
Query: 549 ctcagcgaggatgaccaccccaacctgtgccggtggaccagggactactgcgccttcgag 608
||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 591 ctcagcgaggacgagcaccccaacctgtgccggtggagcagggactactgcgcctgcgag 650
Query: 609 gctctcaagccgtgcatgccggatcgggagaagctcctcgcct 651
| ||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 651 gatctgaagccgtgcatgccggatcgggagaagctgctcgcct 693
Score = 361 bits (182), Expect = 7e-098
Identities = 227/242 (93%)
Strand = Plus / Plus
Query: 21 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 122
Query: 81 gcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaag 140
||||||||||| || ||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 123 gcgctgtgcctcaagggcgtgccgtacgagctcattctggaggacctcttcggcaccaag 182
Query: 141 agcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggc 200
||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 183 agcgacctcctactccaccacaaccccgtccacaagaaggtccccgtgctcctccacggc 242
Query: 201 gacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgac 260
|||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 243 gacgacagggccatctccgaatccctcgtcattgccgagtacgtcgacgaggtcttcgac 302
Query: 261 gg 262
||
Sbjct: 303 gg 304
>gb|CD429023.1|CD429023 ETH1_2_D06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_D06_A002 3', mRNA sequence
Length = 600
Score = 448 bits (226), Expect = e-124
Identities = 292/314 (92%)
Strand = Plus / Plus
Query: 400 aggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcg 459
|||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||
Sbjct: 2 aggaggccaaggagctggtggcgctgctggaggcgcagctcgacggcaagaagttcttcg 61
Query: 460 ccggcgacaggccggggtacctcgacgtggccgcgtccgcgctcgggccctggcgcagcg 519
||||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct: 62 ccggcgacagggcgggatacctcgacgtcgccgcgtcctcgctcggcccctggcgcagcg 121
Query: 520 tcatcgaggagctcaacggtgtggcgctgctcagcgaggatgaccaccccaacctgtgcc 579
||||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||
Sbjct: 122 tcatcgaggagctcaacggagtgaccgtgctcagcgaggacgagcaccccaacctgtgcc 181
Query: 580 ggtggaccagggactactgcgccttcgaggctctcaagccgtgcatgccggatcgggaga 639
|||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 182 ggtggagcagggactactgcgcctgcgaggatctgaagccgtgcatgccggatcgggaga 241
Query: 640 agctcctcgcctacttcactaagaacttcgacaggtacaaggcggccgtcaatgcgacgc 699
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agctgctcgcctacttcaccaagaacttcgacaggtacaaggcggccgtcaatgcgacgt 301
Query: 700 tatcgcagtcgcag 713
||||||||||||||
Sbjct: 302 tatcgcagtcgcag 315
Score = 44.1 bits (22), Expect = 0.022
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 781 ttcagaataacgtagctgtgcccagt 806
||||||||||||||| ||||||||||
Sbjct: 396 ttcagaataacgtagatgtgcccagt 421
>gb|CW165635.1|CW165635 104_574_11152613_148_36480_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152613, DNA
sequence
Length = 704
Score = 446 bits (225), Expect = e-123
Identities = 291/313 (92%)
Strand = Plus / Plus
Query: 401 ggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcgc 460
||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 1 ggaggccaaggagctggtggcgctgctggaggcgcagctcgacggcaagaagttcttcgc 60
Query: 461 cggcgacaggccggggtacctcgacgtggccgcgtccgcgctcgggccctggcgcagcgt 520
|||||||||| |||| ||||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 61 cggcgacagggcgggatacctcgacgtcgccgcgtcctcgctcggcccctggcgcagcgt 120
Query: 521 catcgaggagctcaacggtgtggcgctgctcagcgaggatgaccaccccaacctgtgccg 580
|||||||||||||||||| ||| | ||||||||||||| || |||||||||||||||||
Sbjct: 121 catcgaggagctcaacggagtgaccgtgctcagcgaggacgagcaccccaacctgtgccg 180
Query: 581 gtggaccagggactactgcgccttcgaggctctcaagccgtgcatgccggatcgggagaa 640
||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 181 gtggagcagggactactgcgcctgcgaggatctgaagccgtgcatgccggatcgggagaa 240
Query: 641 gctcctcgcctacttcactaagaacttcgacaggtacaaggcggccgtcaatgcgacgct 700
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 gctgctcgcctacttcaccaagaacttcgacaggtacaaggcggccgtcaatgcgacgtt 300
Query: 701 atcgcagtcgcag 713
|||||||||||||
Sbjct: 301 atcgcagtcgcag 313
Score = 44.1 bits (22), Expect = 0.022
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 781 ttcagaataacgtagctgtgcccagt 806
||||||||||||||| ||||||||||
Sbjct: 394 ttcagaataacgtagatgtgcccagt 419
>gb|CD232788.1|CD232788 SS1_1_C02.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_C02_A012 5', mRNA sequence
Length = 580
Score = 361 bits (182), Expect = 7e-098
Identities = 227/242 (93%)
Strand = Plus / Plus
Query: 21 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 137
Query: 81 gcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaag 140
||||||||||| || ||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 138 gcgctgtgcctcaagggcgtgccgtacgagctcattctggaggacctcttcggcaccaag 197
Query: 141 agcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggc 200
||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 198 agcgacctcctactccaccacaaccccgtccacaagaaggtccccgtgctcctccacggc 257
Query: 201 gacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgac 260
|||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 258 gacgacagggccatctccgaatccctcgtcattgccgagtacgtcgacgaggtcttcgac 317
Query: 261 gg 262
||
Sbjct: 318 gg 319
Score = 307 bits (155), Expect = 1e-081
Identities = 200/215 (93%)
Strand = Plus / Plus
Query: 309 ttctgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtg 368
|||||||| ||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 366 ttctgggctgacttcatcgagaacaagctcaccaagcctttcttcatggcgatctgggtg 425
Query: 369 gaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctg 428
|||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 426 gaggagggcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctg 485
Query: 429 gaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtg 488
|||||||||||||| || |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 486 gaggcgcagctcgacggcaagaagttcttcgccggcgacaggccgggatacctcgacgtc 545
Query: 489 gccgcgtccgcgctcgggccctggcgcagcgtcat 523
||||||||| ||||||| |||||||||||||||||
Sbjct: 546 gccgcgtcctcgctcggcccctggcgcagcgtcat 580
>gb|CD429152.1|CD429152 ETH1_2_D06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_D06_A002 5', mRNA sequence
Length = 584
Score = 361 bits (182), Expect = 7e-098
Identities = 227/242 (93%)
Strand = Plus / Plus
Query: 21 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 138
Query: 81 gcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaag 140
||||||||||| || ||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct: 139 gcgctgtgcctcaagggcgtgccgtacgagctcattctggaggacctcttcggcaccaag 198
Query: 141 agcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggc 200
||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 199 agcgacctcctactccaccacaaccccgtccacaagaaggtccccgtgctcctccacggc 258
Query: 201 gacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgac 260
|||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 259 gacgacagggccatctccgaatccctcgtcattgccgagtacgtcgacgaggtcttcgac 318
Query: 261 gg 262
||
Sbjct: 319 gg 320
Score = 297 bits (150), Expect = 9e-079
Identities = 201/218 (92%)
Strand = Plus / Plus
Query: 309 ttctgggccgacttcatcgagaccaggctcaccaagcccttcttcatggcgatctgggtg 368
|||||||| ||||||||||||| || ||| |||||||| |||||||||||||||||||||
Sbjct: 367 ttctgggctgacttcatcgagaacaagcttaccaagccgttcttcatggcgatctgggtg 426
Query: 369 gaggagcgcgaagcgcgcctgcggttcgaggaggaggccaaggagctcgtggcgctgctg 428
|||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 427 gaggagagcgaagcgcggctgcggttcgagaaggaggccaaggagctggtggcgctgctg 486
Query: 429 gaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacctcgacgtg 488
|||||||||||||| || |||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 487 gaggcgcagctcgacggcaagaagttcttcgccggcgacagggcgggatacctcgacgtc 546
Query: 489 gccgcgtccgcgctcgggccctggcgcagcgtcatcga 526
||||||||| ||||||| ||||||||||||||||||||
Sbjct: 547 gccgcgtcctcgctcggcccctggcgcagcgtcatcga 584
>gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147178, DNA
sequence
Length = 643
Score = 196 bits (99), Expect = 3e-048
Identities = 202/235 (85%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 134 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 193
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| ||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 194 gcctcaaaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 250
Query: 148 tcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggcc 207
| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 251 ttctgctccagcacaaccccgtgcacaagctcgtgcccgtgctcctccacggcga---cc 307
Query: 208 gggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 308 gggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacgaggccttcgacgg 362
>gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_G12_A002 5', mRNA sequence
Length = 573
Score = 196 bits (99), Expect = 3e-048
Identities = 202/235 (85%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 118 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 177
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| ||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 178 gcctcaaaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 234
Query: 148 tcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggcc 207
| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 235 ttctgctccagcacaaccccgtgcacaagctcgtgcccgtgctcctccacggcga---cc 291
Query: 208 gggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 292 gggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacgaggccttcgacgg 346
>gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_A10_A002 5', mRNA sequence
Length = 760
Score = 196 bits (99), Expect = 3e-048
Identities = 202/235 (85%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 100 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 159
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| ||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 160 gcctcaaaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 216
Query: 148 tcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggcc 207
| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 217 ttctgctccagcacaaccccgtgcacaagctcgtgcccgtgctcctccacggcga---cc 273
Query: 208 gggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 274 gggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacgaggccttcgacgg 328
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 420 gcgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||||| |||||||||||||| |||| ||||||||||| |||||||
Sbjct: 486 gcgctggtggaggcgcagctcaagggccggaggttcttcggcggcgac 533
>gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_52_A06_A002 5', mRNA sequence
Length = 448
Score = 188 bits (95), Expect = 6e-046
Identities = 201/235 (85%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 100 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 159
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| | ||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 160 gcctcagaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 216
Query: 148 tcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggcc 207
| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 217 ttctgctccagcacaaccccgtgcacaagctcgtgcccgtgctcctccacggcga---cc 273
Query: 208 gggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 274 gggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacgaggccttcgacgg 328
>gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_F01_A002 3', mRNA sequence
Length = 761
Score = 188 bits (95), Expect = 6e-046
Identities = 171/195 (87%), Gaps = 6/195 (3%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| ||| ||| |||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 28 ccgcgccgaggtggccctgcgcctcaaaggggtgccctacgagctcatcctggaggacct 87
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||| |||||||||||| |||||||| |||||||||||||||||| ||||||||
Sbjct: 88 ga---gcaacaagagcgagcttctgctccagcacaaccccgtgcacaagctcgtgcccgt 144
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||
Sbjct: 145 gctcctccacggcga---ccgggccatctccgagtcgctcgtcgtcgtcgagtacgtcga 201
Query: 248 cgaggccttcgacgg 262
|||||||||||||||
Sbjct: 202 cgaggccttcgacgg 216
Score = 48.1 bits (24), Expect = 0.001
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 420 gcgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||||| |||||||||||||| |||| ||||||||||| |||||||
Sbjct: 374 gcgctggtggaggcgcagctcaagggccggaggttcttcggcggcgac 421
>gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_A06_A002 5', mRNA sequence
Length = 611
Score = 188 bits (95), Expect = 6e-046
Identities = 201/235 (85%), Gaps = 6/235 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 102 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 161
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| ||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 162 gcctcaaaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 218
Query: 148 tcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggcc 207
| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 219 ttctgctccagcacaaccccgtgcacaagctcgtgcccgtgctcctccacggcga---cc 275
Query: 208 gggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||
Sbjct: 276 gggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacaaggccttcgacgg 330
>gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119182, DNA
sequence
Length = 667
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Minus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 338 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 279
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 278 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 222
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 221 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 162
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 161 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 113
>gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 497
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 87 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 146
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 147 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 203
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 204 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 263
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 264 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 312
>gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 82 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 141
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 142 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 198
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 199 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 258
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 259 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 307
>gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 87 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 146
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 147 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 203
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 204 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 263
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 264 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 312
>gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 90 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 149
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 150 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 206
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 207 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 266
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 267 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 315
>gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 309
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 82 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 141
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 142 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 198
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 199 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 258
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 259 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 307
>gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_B03_A002 5', mRNA sequence
Length = 586
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 102 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 161
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 162 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 218
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 219 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 278
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 279 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 327
>gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_G02_A002 5', mRNA sequence
Length = 748
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 76 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 135
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 136 gagttccctacgagcttatccaggagaaggacctgc---gcaacaagagcgagctgctgc 192
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 193 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 252
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 253 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 301
Score = 40.1 bits (20), Expect = 0.35
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 422 gctgctggaggcgcagctcgagggaaagaggttcttcgccggcgacaggccggggtacct 481
||||||||||| |||| | |||| ||| ||||||||| ||||||| | ||| |||||
Sbjct: 458 gctgctggaggggcaggtgaaggggaagcggttcttcggcggcgacggcgtgggctacct 517
Query: 482 cgacgtggccgc 493
|||||| |||||
Sbjct: 518 cgacgtcgccgc 529
>gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_H08_A002 5', mRNA sequence
Length = 626
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 73 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 132
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 133 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 189
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 190 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 249
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 250 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 298
>gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_F04_A002 5', mRNA sequence
Length = 718
Score = 184 bits (93), Expect = 1e-044
Identities = 196/229 (85%), Gaps = 6/229 (2%)
Strand = Plus / Plus
Query: 37 tgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgtgcctgaaag 96
||||||||||||||| |||||||| | |||||||||||||||||| ||||| || |
Sbjct: 76 tgatcggcttcttcgacagcccgttcagccaccgcgcggaggcggcgctctgcctcaagg 135
Query: 97 gcgtgccgtacgagctgatcctggag---gacctgttcggcagcaagagcgagctcctgc 153
| || || |||||||| |||| |||| |||||| ||| |||||||||||| ||||
Sbjct: 136 gagttccctacgagctcatccaggagaaggacctgc---gcaacaagagcgagctgctgc 192
Query: 154 tccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggcca 213
| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 193 tgcaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgaccgccgcgccg 252
Query: 214 tctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||| |||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 253 tctgcgagtcgctcgtcatcgtcgagtacgtcgacgaggcgttccacgg 301
>gb|CX609787.1|CX609787 ANR1_14_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_F01_A002 5', mRNA sequence
Length = 387
Score = 182 bits (92), Expect = 4e-044
Identities = 202/236 (85%), Gaps = 7/236 (2%)
Strand = Plus / Plus
Query: 28 cggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgctgt 87
|||||| ||| ||||||| |||| |||||||| || | |||||| |||| ||| |||
Sbjct: 25 cggtgaggctaatcggctctttcgccagcccgttcgtgcaccgcgccgaggtggccctgc 84
Query: 88 gcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagc 147
|||| ||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 85 gcctcaaaggggtgccctacgagctcatcctggaggacctga---gcaacaagagcgagc 141
Query: 148 tcctgctccaccacaaccccg-tgcacaagaaggtgcccgtgctcctccacggcgacggc 206
| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 142 ttctgctccagcacaaccccgatgcacaagctcgtgcccgtgctcctccacggcgac--- 198
Query: 207 cgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 199 cgggccatctccgagtcgctcgtcgtcgtcgagtacgtcgacgaggccttcgacgg 254
>gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432441, DNA
sequence
Length = 356
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 59 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 115
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 116 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 172
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 173 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 219
>gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503086, DNA
sequence
Length = 450
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 174 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 230
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 231 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 287
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 288 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 334
>gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524361, DNA
sequence
Length = 685
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Minus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 531 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 475
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 474 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 418
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 417 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 371
>gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465646, DNA
sequence
Length = 701
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 399 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 455
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 456 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 512
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 513 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 559
>gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070o12, DNA
sequence
Length = 495
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 283 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 339
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 340 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 396
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 397 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 443
>gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 527
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 112 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 168
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 169 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 225
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 226 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 272
Score = 40.1 bits (20), Expect = 0.35
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 426 ctggaggcgcagctcgagggaaagaggttctt 457
||||||||||||||| | || |||||||||||
Sbjct: 433 ctggaggcgcagctcaacgggaagaggttctt 464
>gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_H02_A002 5', mRNA sequence
Length = 597
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 122 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 178
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 179 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 235
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 236 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 282
Score = 40.1 bits (20), Expect = 0.35
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 426 ctggaggcgcagctcgagggaaagaggttctt 457
||||||||||||||| | || |||||||||||
Sbjct: 443 ctggaggcgcagctcaacgggaagaggttctt 474
>gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_H12_A002 5', mRNA sequence
Length = 835
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 124 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 180
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 181 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 237
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 238 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 284
Score = 40.1 bits (20), Expect = 0.35
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 426 ctggaggcgcagctcgagggaaagaggttctt 457
||||||||||||||| | || |||||||||||
Sbjct: 445 ctggaggcgcagctcaacgggaagaggttctt 476
>gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_H04_A002 5', mRNA sequence
Length = 728
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 130 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 186
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 187 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 243
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 244 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 290
Score = 40.1 bits (20), Expect = 0.35
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 426 ctggaggcgcagctcgagggaaagaggttctt 457
||||||||||||||| | || |||||||||||
Sbjct: 426 ctggaggcgcagctcaacgggaagaggttctt 457
>gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_C03_A002 5', mRNA sequence
Length = 603
Score = 133 bits (67), Expect = 3e-029
Identities = 143/167 (85%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| |||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 129 ggcgtgccatacgagctgatcgaggaagacctga---gcaacaagagcgagctgctgctc 185
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 186 gccaacaaccctgtccacaagaaggtgcccgtgctcctccatggcga---ccgggccatc 242
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 243 tgtgagtccctcgtcatcgttcagtacgtcgacgaggccttcgacgg 289
Score = 40.1 bits (20), Expect = 0.35
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 426 ctggaggcgcagctcgagggaaagaggttctt 457
||||||||||||||| | || |||||||||||
Sbjct: 450 ctggaggcgcagctcaacgggaagaggttctt 481
>gb|CW790974.1|CW790974 SP__Ba0075B22.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0075B22 3', DNA sequence
Length = 339
Score = 127 bits (64), Expect = 2e-027
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 21 ccgccgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcg 80
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 268 ccgccgccggtgaagctgatcggcttctttggcagcccgtacgcgttccgcgcggaggcg 327
Query: 81 gcgctgtgcct 91
|||||| ||||
Sbjct: 328 gcgctgngcct 338
>gb|CL183364.1|CL183364 104_395_10898123_114_31917_347 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898123, DNA
sequence
Length = 764
Score = 109 bits (55), Expect = 5e-022
Identities = 140/167 (83%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 561 ggcgtgccatacgagctgatccgggaagacctga---gcaacaagagcgagctgctgctc 617
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || ||||||| |||||| ||||||||||| |||||| | |||||||
Sbjct: 618 gccaataaccctgtccacaagacggtgcctgtgctcctccatggcgac---caggccatc 674
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 675 tgtgagtccctcgtcatcgtcgagtacatcgacgaggtcttcgacgg 721
>gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157384, DNA
sequence
Length = 621
Score = 109 bits (55), Expect = 5e-022
Identities = 140/167 (83%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 377 ggcgtgccatacgagctgatccgggaagacctga---gcaacaagagcgagctgctgctc 433
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || ||||||| |||||| ||||||||||| |||||| | |||||||
Sbjct: 434 gccaataaccctgtccacaagacggtgcctgtgctcctccatggcgac---caggccatc 490
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 491 tgtgagtccctcgtcatcgtcgagtacatcgacgaggtcttcgacgg 537
>gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224767, DNA
sequence
Length = 649
Score = 109 bits (55), Expect = 5e-022
Identities = 140/167 (83%), Gaps = 6/167 (3%)
Strand = Plus / Minus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 298 ggcgtgccatacgagctgatccgggaagacctga---gcaacaagagcgagctgctgctc 242
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || ||||||| |||||| ||||||||||| |||||| | |||||||
Sbjct: 241 gccaataaccctgtccacaagacggtgcctgtgctcctccatggcgac---caggccatc 185
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 184 tgtgagtccctcgtcatcgtcgagtacatcgacgaggtcttcgacgg 138
>gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198o23, DNA
sequence
Length = 456
Score = 109 bits (55), Expect = 5e-022
Identities = 140/167 (83%), Gaps = 6/167 (3%)
Strand = Plus / Minus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||||||||| ||||||
Sbjct: 314 ggcgtgccatacgagctgatccgggaagacctga---gcaacaagagcgagctgctgctc 258
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || ||||||| |||||| ||||||||||| |||||| | |||||||
Sbjct: 257 gccaataaccctgtccacaagacggtgcctgtgctcctccatggcgac---caggccatc 201
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| |||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 200 tgtgagtccctcgtcatcgtcgagtacatcgacgaggtcttcgacgg 154
>gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464593, DNA
sequence
Length = 606
Score = 99.6 bits (50), Expect = 4e-019
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 159 cacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctcc 218
||||||||| | ||||||||||||||||||||||| |||||| || || || ||| |
Sbjct: 605 cacaaccccatccacaagaaggtgcccgtgctcctgcacggccaccgc---gctgtctgc 549
Query: 219 gagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 548 gagtccctcgtcatcgtggagtacgtcgacgaggccttcgacgg 505
>gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f283e08, DNA
sequence
Length = 625
Score = 99.6 bits (50), Expect = 4e-019
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 159 cacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctcc 218
||||||||| | ||||||||||||||||||||||| |||||| || || || ||| |
Sbjct: 578 cacaaccccatccacaagaaggtgcccgtgctcctgcacggccaccgc---gctgtctgc 522
Query: 219 gagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 521 gagtccctcgtcatcgtggagtacgtcgacgaggccttcgacgg 478
>gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_53_C06_A002 5', mRNA sequence
Length = 290
Score = 95.6 bits (48), Expect = 7e-018
Identities = 107/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||| ||||||| ||||| | ||||||||| | ||||||||||||||||||||||| ||
Sbjct: 134 caagggcgagctgctgctgcggcacaaccccatccacaagaaggtgcccgtgctcctgca 193
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcctt 256
|||| || || || ||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 194 cggccaccgc---gctgtctgcgagtccctcgtcatcgtggagtacgtcgactaggcctt 250
Query: 257 cgacgg 262
||||||
Sbjct: 251 cgacgg 256
>gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160476, DNA
sequence
Length = 685
Score = 93.7 bits (47), Expect = 3e-017
Identities = 138/167 (82%), Gaps = 6/167 (3%)
Strand = Plus / Minus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||| ||||| ||||||
Sbjct: 675 ggcgtgccatacgagctgatccaggaagacctga---gcaacaagagtgagctgctgctc 619
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || |||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 618 accaagaaccctgtccacaagaaggtgcccgtgctcctccatggcga---tctggcagtc 562
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 561 tgtgagtcactcgtcatcgtcgagtacatcgacgaggccttcgacgg 515
Score = 71.9 bits (36), Expect = 1e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 400 aggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcg 459
|||||||||||||| | ||||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 286 aggaggccaaggagaacctggcgctcctggaggcgcagctcgacgggaagaggttctttg 227
Query: 460 ccggcgacaggccggggtacctcgacgtggccgcgt 495
||||||| || |||||||| ||| | |||||||
Sbjct: 226 gtggcgacacacccgggtaccttgacatagccgcgt 191
>gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196114, DNA
sequence
Length = 618
Score = 93.7 bits (47), Expect = 3e-017
Identities = 138/167 (82%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||| ||||| ||||||
Sbjct: 120 ggcgtgccatacgagctgatccaggaagacctga---gcaacaagagtgagctgctgctc 176
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || |||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 177 accaagaaccctgtccacaagaaggtgcccgtgctcctccatggcga---tctggcagtc 233
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 234 tgtgagtcactcgtcatcgtcgagtacatcgacgaggccttcgacgg 280
Score = 71.9 bits (36), Expect = 1e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 400 aggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcg 459
|||||||||||||| | ||||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 509 aggaggccaaggagaacctggcgctcctggaggcgcagctcgacgggaagaggttctttg 568
Query: 460 ccggcgacaggccggggtacctcgacgtggccgcgt 495
||||||| || |||||||| ||| | |||||||
Sbjct: 569 gtggcgacacacccgggtaccttgacatagccgcgt 604
>gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196114, DNA
sequence
Length = 633
Score = 93.7 bits (47), Expect = 3e-017
Identities = 138/167 (82%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||| ||||| ||||||
Sbjct: 120 ggcgtgccatacgagctgatccaggaagacctga---gcaacaagagtgagctgctgctc 176
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || |||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 177 accaagaaccctgtccacaagaaggtgcccgtgctcctccatggcga---tctggcagtc 233
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 234 tgtgagtcactcgtcatcgtcgagtacatcgacgaggccttcgacgg 280
Score = 71.9 bits (36), Expect = 1e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 400 aggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcg 459
|||||||||||||| | ||||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 509 aggaggccaaggagaacctggcgctcctggaggcgcagctcgacgggaagaggttctttg 568
Query: 460 ccggcgacaggccggggtacctcgacgtggccgcgt 495
||||||| || |||||||| ||| | |||||||
Sbjct: 569 gtggcgacacacccgggtaccttgacatagccgcgt 604
>gb|CW415526.1|CW415526 fsbb001f115k18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f115k18, DNA
sequence
Length = 717
Score = 93.7 bits (47), Expect = 3e-017
Identities = 100/117 (85%), Gaps = 3/117 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||||||||||||| |||||| || ||||||||| | ||||||||||||||
Sbjct: 410 caagagcgagctcctgctccacgccaacccggtccacaagaagatccccgtgctcctcca 469
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| |||||| |||||||||| |||||| ||||| ||||||||||
Sbjct: 470 ---cgacggccgccccatctgcgagtccctcctcatcgtgcagtacctcgacgaggc 523
>gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 93.7 bits (47), Expect = 3e-017
Identities = 138/167 (82%), Gaps = 6/167 (3%)
Strand = Plus / Plus
Query: 96 ggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagctcctgctc 155
|||||||| ||||||||||||| ||| |||||| ||| |||||| ||||| ||||||
Sbjct: 107 ggcgtgccatacgagctgatccaggaagacctga---gcaacaagagtgagctgctgctc 163
Query: 156 caccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatc 215
| | ||||| || |||||||||||||||||||||||||| ||||| | ||| ||
Sbjct: 164 accaagaaccctgtccacaagaaggtgcccgtgctcctccatggcga---tctggcagtc 220
Query: 216 tccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 221 tgtgagtcactcgtcatcgtcgagtacatcgacgaggccttcgacgg 267
Score = 71.9 bits (36), Expect = 1e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 400 aggaggccaaggagctcgtggcgctgctggaggcgcagctcgagggaaagaggttcttcg 459
|||||||||||||| | ||||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 402 aggaggccaaggagaacctggcgctcctggaggcgcagctcgacgggaagaggttctttg 461
Query: 460 ccggcgacaggccggggtacctcgacgtggccgcgt 495
||||||| || |||||||| ||| | |||||||
Sbjct: 462 gtggcgacacacccgggtaccttgacatagccgcgt 497
>gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889715, DNA
sequence
Length = 698
Score = 85.7 bits (43), Expect = 7e-015
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
||||||||| |||||||||||||||||||||||||||||||| | | || |||||||
Sbjct: 532 caaccccgtccacaagaaggtgcccgtgctcctccacggcga---cacgcccgtctccga 588
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttc 257
||| |||||||||| |||||| ||||||| ||||||
Sbjct: 589 gtcactcgtcatcgtggagtacctcgacgacgccttc 625
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 275,782
Number of Sequences: 832831
Number of extensions: 275782
Number of successful extensions: 84546
Number of sequences better than 0.5: 278
Number of HSP's better than 0.5 without gapping: 269
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 83911
Number of HSP's gapped (non-prelim): 584
length of query: 911
length of database: 491,359,669
effective HSP length: 20
effective length of query: 891
effective length of database: 474,703,049
effective search space: 422960416659
effective search space used: 422960416659
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)