BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3561840.2.1
(1168 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 763 0.0
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 694 0.0
gb|BG049402.1|BG049402 OV1_19_E04.g1_A002 Ovary 1 (OV1) Sor... 533 e-149
gb|BG411765.1|BG411765 OV2_37_G09.g1_A002 Ovary 2 (OV2) Sor... 511 e-143
gb|BE918286.1|BE918286 OV1_1_E07.g1_A002 Ovary 1 (OV1) Sorg... 505 e-141
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 398 e-109
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 394 e-108
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 337 1e-090
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 337 1e-090
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 337 1e-090
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 337 1e-090
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 337 1e-090
gb|CW313121.1|CW313121 104_803_11471121_148_35790_043 Sorgh... 337 1e-090
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 280 3e-073
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 280 3e-073
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 280 3e-073
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 280 3e-073
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 280 3e-073
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 246 4e-063
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 246 4e-063
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 246 4e-063
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 246 4e-063
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 246 4e-063
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 244 2e-062
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 244 2e-062
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 244 2e-062
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 244 2e-062
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 208 9e-052
gb|BG054220.1|BG054220 OV2_3_G05.g1_A002 Ovary 2 (OV2) Sorg... 202 5e-050
gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorgh... 180 2e-043
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 159 7e-037
gb|CW111570.1|CW111570 104_485_11104392_116_34538_096 Sorgh... 155 1e-035
gb|CW313120.1|CW313120 104_803_11471121_116_35786_043 Sorgh... 155 1e-035
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 151 2e-034
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 151 2e-034
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 151 2e-034
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 151 2e-034
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 151 2e-034
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 151 2e-034
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 145 1e-032
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 143 4e-032
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 143 4e-032
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 143 4e-032
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 143 4e-032
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 143 4e-032
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 143 4e-032
gb|CW206089.1|CW206089 104_634_11187411_148_36952_004 Sorgh... 135 1e-029
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 135 1e-029
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 135 1e-029
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 131 2e-028
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 131 2e-028
gb|CL171822.1|CL171822 104_373_10889698_148_31776_370 Sorgh... 129 6e-028
gb|CW249676.1|CW249676 104_711_11222976_116_35044_088 Sorgh... 129 6e-028
gb|CW249677.1|CW249677 104_711_11222976_148_35048_088 Sorgh... 129 6e-028
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 129 6e-028
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 129 6e-028
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 129 6e-028
gb|CW480188.1|CW480188 fsbb001f239c02f0 Sorghum methylation... 129 6e-028
gb|CW480189.1|CW480189 fsbb001f239c02k0 Sorghum methylation... 129 6e-028
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 129 6e-028
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 129 6e-028
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 129 6e-028
gb|CW165612.1|CW165612 104_574_11152600_116_36481_064 Sorgh... 127 2e-027
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 125 1e-026
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 125 1e-026
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 125 1e-026
gb|CW093595.1|CW093595 104_456_10999867_148_37470_068 Sorgh... 123 4e-026
gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation... 123 4e-026
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 123 4e-026
gb|CL171821.1|CL171821 104_373_10889698_116_31777_370 Sorgh... 121 2e-025
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 121 2e-025
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 121 2e-025
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 121 2e-025
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 121 2e-025
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 119 6e-025
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 115 9e-024
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 115 9e-024
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 115 9e-024
gb|CW032483.1|CW032483 104_261_10501401_115_30364 Sorghum m... 115 9e-024
gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorgh... 115 9e-024
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 115 9e-024
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 113 4e-023
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 111 1e-022
gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sor... 111 1e-022
gb|CW161335.1|CW161335 104_568_11150361_148_36430_043 Sorgh... 107 2e-021
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 105 9e-021
gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorgh... 105 9e-021
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 103 4e-020
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 101 1e-019
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 98 2e-018
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 96 9e-018
gb|CW452258.1|CW452258 fsbb001f192l07k0 Sorghum methylation... 94 3e-017
gb|CW498786.1|CW498786 fsbb001f293d08f0 Sorghum methylation... 94 3e-017
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 94 3e-017
gb|BZ694613.1|BZ694613 SP__Ba0049G01.r SP__Ba Sorghum propi... 88 2e-015
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 88 2e-015
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 88 2e-015
gb|CW788815.1|CW788815 SP__Ba0049G01.r SP__Ba Sorghum propi... 88 2e-015
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 88 2e-015
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 88 2e-015
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 88 2e-015
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 86 8e-015
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 86 8e-015
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 86 8e-015
gb|CW448512.1|CW448512 fsbb001f182c17f0 Sorghum methylation... 86 8e-015
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 86 8e-015
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 86 8e-015
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 86 8e-015
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 86 8e-015
gb|BF586649.1|BF586649 FM1_29_H03.b1_A003 Floral-Induced Me... 86 8e-015
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 86 8e-015
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 84 3e-014
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 82 1e-013
gb|CL150340.1|CL150340 104_332_10778461_116_31358_013 Sorgh... 80 5e-013
gb|CL170087.1|CL170087 104_370_10813531_116_31789_235 Sorgh... 80 5e-013
gb|CW088554.1|CW088554 104_433_10948220_114_32568_072 Sorgh... 80 5e-013
gb|CW088555.1|CW088555 104_433_10948220_116_32578_072 Sorgh... 80 5e-013
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 80 5e-013
gb|CW422054.1|CW422054 fsbb001f131c13f0 Sorghum methylation... 80 5e-013
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 80 5e-013
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 76 8e-012
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 76 8e-012
gb|CW209670.1|CW209670 104_639_11189376_116_36992_084 Sorgh... 76 8e-012
gb|CW209671.1|CW209671 104_639_11189376_148_36991_084 Sorgh... 76 8e-012
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 76 8e-012
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 76 8e-012
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 76 8e-012
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 72 1e-010
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 72 1e-010
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 72 1e-010
gb|CW195540.1|CW195540 104_619_11180693_116_36805_027 Sorgh... 70 5e-010
gb|CW296060.1|CW296060 104_777_11461289_148_35626_069 Sorgh... 70 5e-010
gb|CW296923.1|CW296923 104_778_11461772_116_35631_066 Sorgh... 70 5e-010
gb|CW296924.1|CW296924 104_778_11461772_148_35635_066 Sorgh... 70 5e-010
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 70 5e-010
gb|BF704612.1|BF704612 FM1_49_C04.b1_A003 Floral-Induced Me... 70 5e-010
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 70 5e-010
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 70 5e-010
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 70 5e-010
gb|CB927715.1|CB927715 ABA1_27_E04.g1_A012 Abscisic acid-tr... 70 5e-010
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 70 5e-010
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 70 5e-010
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 70 5e-010
gb|CL176346.1|CL176346 104_382_10893067_116_31763_283 Sorgh... 68 2e-009
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 68 2e-009
gb|AW678480.1|AW678480 WS1_16_D03.b1_A002 Water-stressed 1 ... 68 2e-009
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 68 2e-009
gb|AW924005.1|AW924005 WS1_32_E02.b1_A002 Water-stressed 1 ... 68 2e-009
gb|AW924046.1|AW924046 WS1_49_D06.b1_A002 Water-stressed 1 ... 68 2e-009
gb|BE365263.1|BE365263 PI1_26_D10.b1_A002 Pathogen induced ... 68 2e-009
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 68 2e-009
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 68 2e-009
gb|BF421169.1|BF421169 FM1_6_C07.b1_A003 Floral-Induced Mer... 68 2e-009
gb|BG355470.1|BG355470 EM1_16_H03.b1_A002 Embryo 1 (EM1) So... 68 2e-009
gb|BG933507.1|BG933507 WS1_4_C03.b1_A002 Water-stressed 1 (... 68 2e-009
gb|BM323902.1|BM323902 PIC1_29_A07.b1_A002 Pathogen-infecte... 68 2e-009
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 68 2e-009
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 68 2e-009
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 68 2e-009
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 68 2e-009
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 68 2e-009
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 68 2e-009
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 68 2e-009
gb|CW195541.1|CW195541 104_619_11180693_148_36801_027 Sorgh... 64 3e-008
gb|CW068300.1|CW068300 104_317_10525048_1_30096 Sorghum met... 62 1e-007
gb|CW092369.1|CW092369 104_454_10999117_116_33040_049 Sorgh... 62 1e-007
gb|CW253750.1|CW253750 104_717_11225270_116_35113_055 Sorgh... 62 1e-007
gb|CW378066.1|CW378066 fsbb001f056k18f0 Sorghum methylation... 62 1e-007
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 62 1e-007
gb|CW472381.1|CW472381 fsbb001f227e20f0 Sorghum methylation... 60 5e-007
gb|CW025535.1|CW025535 104_227_10488251_116_30505 Sorghum m... 56 8e-006
gb|CW299620.1|CW299620 104_782_11463215_116_35689_086 Sorgh... 56 8e-006
gb|CL173100.1|CL173100 104_376_10890649_116_31795_169 Sorgh... 54 3e-005
gb|CL173101.1|CL173101 104_376_10890649_148_31794_169 Sorgh... 54 3e-005
gb|CW472382.1|CW472382 fsbb001f227e20k0 Sorghum methylation... 54 3e-005
gb|CW297229.1|CW297229 104_779_11461931_116_35636_042 Sorgh... 52 1e-004
gb|CW413762.1|CW413762 fsbb001f113b07k0 Sorghum methylation... 52 1e-004
gb|CW457553.1|CW457553 fsbb001f203g17k0 Sorghum methylation... 52 1e-004
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 50 5e-004
gb|CW296059.1|CW296059 104_777_11461289_116_35622_069 Sorgh... 50 5e-004
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 50 5e-004
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 50 5e-004
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 50 5e-004
gb|BZ627051.1|BZ627051 ih50a03.b1 WGS-SbicolorF (DH5a methy... 48 0.002
gb|CW040533.1|CW040533 104_274_10506199_116_30433 Sorghum m... 48 0.002
gb|CW040534.1|CW040534 104_274_10506199_116_30479 Sorghum m... 48 0.002
gb|CW040535.1|CW040535 104_274_10506199_116_30481 Sorghum m... 48 0.002
gb|CW111571.1|CW111571 104_485_11104392_148_34534_096 Sorgh... 48 0.002
gb|CW320373.1|CW320373 104_813_11474980_148_35895_010 Sorgh... 48 0.002
gb|CW302656.1|CW302656 104_786_11464832_148_35669_018 Sorgh... 46 0.007
gb|CW457552.1|CW457552 fsbb001f203g17f0 Sorghum methylation... 46 0.007
gb|CW121026.1|CW121026 104_498_11109663_116_34649_052 Sorgh... 44 0.029
gb|CW301000.1|CW301000 104_784_11463972_148_36259_038 Sorgh... 44 0.029
gb|BF656173.1|BF656173 FM1_43_H06.b1_A003 Floral-Induced Me... 44 0.029
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 42 0.11
gb|CW069714.1|CW069714 104_319_10526054_5_30099 Sorghum met... 42 0.11
gb|CW152181.1|CW152181 104_553_11144352_116_36325_092 Sorgh... 42 0.11
gb|CD430222.1|CD430222 ETH1_17_G03.g1_A002 Ethylene-treated... 42 0.11
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 42 0.11
gb|BZ345206.1|BZ345206 hr47c01.b1 WGS-SbicolorF (JM107 adap... 40 0.45
gb|CL149416.1|CL149416 104_330_10777812_116_31354_132 Sorgh... 40 0.45
gb|CL150400.1|CL150400 104_332_10778502_116_31358_054 Sorgh... 40 0.45
gb|CL152627.1|CL152627 104_336_10780104_114_31365_120 Sorgh... 40 0.45
gb|CW023458.1|CW023458 104_163_10432460_5_30009 Sorghum met... 40 0.45
gb|CW077644.1|CW077644 104_383_10893411_116_31773_243 Sorgh... 40 0.45
gb|CW097033.1|CW097033 104_463_11002231_116_34344_032 Sorgh... 40 0.45
gb|CW117952.1|CW117952 104_494_11107937_148_34681_075 Sorgh... 40 0.45
gb|CW167099.1|CW167099 104_576_11153420_148_36488_078 Sorgh... 40 0.45
gb|CW207026.1|CW207026 104_636_11187898_116_36976_047 Sorgh... 40 0.45
gb|CW221500.1|CW221500 104_656_11197941_148_37167_085 Sorgh... 40 0.45
gb|CW393457.1|CW393457 fsbb001f080i11f0 Sorghum methylation... 40 0.45
gb|CW446651.1|CW446651 fsbb001f179g14k0 Sorghum methylation... 40 0.45
>gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 763 bits (385), Expect = 0.0
Identities = 448/469 (95%)
Strand = Plus / Plus
Query: 182 gggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtc 241
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 7 gggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgaggtggccctcatc 66
Query: 242 gtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatc 301
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 67 gtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtgaaggctacgatt 126
Query: 302 gagaggtacaagaaggcacacgccgttggctcttcctctggccccccactcttagagcac 361
|||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||
Sbjct: 127 gagaggtacaagaaggtacacaccgttgggtcttcctctgggcccccactcttagagcac 186
Query: 362 aatgcccagcaattctaccagcaagaatccgcaaaactgcgcaaccagatccagatgctg 421
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 187 aatgcccagcaattctaccagcaagaatccgcaaaactgcgcaaccagattcagatgctg 246
Query: 422 caaaacactaacaggcacttggttggtgactctgtgggaaacttgtcactcaaagagctg 481
||||||||||||||||||||||| ||||| |||||||||||| || ||||||| ||||||
Sbjct: 247 caaaacactaacaggcacttggtcggtgattctgtgggaaacctgacactcaaggagctg 306
Query: 482 aagcagctggagagccgccttgagaaaggcatctctaagatcagggccaggaagagtgag 541
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 307 aagcagctggagagccgccttgagaaaggcatctctaaggtcagggccaggaagaatgag 366
Query: 542 ctgctggctgccgagatcaattacatggccaaaagggagactgagcttcagaatgaccac 601
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 367 ctgctggctgcggagatcaattacatggccaaaagggagactgaacttcagaatgaccac 426
Query: 602 atgaacctcaggaccaagattgaggagggagagcaacagctgcagcagg 650
|||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgaacctcaagaccaagattgaggagggagagcaacagctgcagcagg 475
>gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 496
Score = 694 bits (350), Expect = 0.0
Identities = 424/446 (95%), Gaps = 2/446 (0%)
Strand = Plus / Plus
Query: 52 ttgcttgcaagtccaagaaact-gct-agagaggaacaagctgagatctccagcatgggg 109
|||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct: 51 ttgcttgcaagtccaagaaactagcagagagaggaacaagctgcgatctccagcatgggg 110
Query: 110 aggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 170
Query: 170 aagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgag 229
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 171 aagcgccgcaacgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgag 230
Query: 230 gtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtg 289
||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 231 gtggccctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtg 290
Query: 290 aaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggcccccca 349
||||||||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||
Sbjct: 291 aaggctacgattgagaggtacaagaaggtacacaccgttgggtcttcctctgggccccca 350
Query: 350 ctcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgcaaccag 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgcaaccag 410
Query: 410 atccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaacttgtca 469
|| |||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||
Sbjct: 411 attcagatgctgcaaaacactaacaggcacttggtcggtgattctgtgggaaacctgaca 470
Query: 470 ctcaaagagctgaagcagctggagag 495
||||| ||||||||||||||||||||
Sbjct: 471 ctcaaggagctgaagcagctggagag 496
>gb|BG049402.1|BG049402 OV1_19_E04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 533 bits (269), Expect = e-149
Identities = 442/499 (88%), Gaps = 23/499 (4%)
Strand = Plus / Plus
Query: 503 gagaaaggcatctctaagatcagggccaggaagagtgagctgctggctgccgagatcaat 562
|||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1 gagaaaggcatctctaaggtcagggccaggaagaatgagctgctggctgcggagatcaat 60
Query: 563 tacatggccaaaagggagactgagcttcagaatgaccacatgaacctcaggaccaagatt 622
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacatggccaaaagggagactgaacttcagaatgaccacatgaacctcaggaccaagatt 120
Query: 623 gaggagggagagcaacagctgcagcaggtgactgtggcccagtctgtc---gcagcagca 679
|||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||
Sbjct: 121 gaggagggagagcaacagctgcagcaggtgaccgtggcccggtctgtcgcagcagcagca 180
Query: 680 gctgccaccgacgtggagctgaatccgttcttggagatggataccaaatgcttcttccct 739
|| |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 181 gcagccaccaacgtggagctgaacccattcttggagatggataccaaatgcttcttccct 240
Query: 740 ggcggccccttcgcgacactggacatgaagtgcttcttccccggcagcttgcagatgctg 799
||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 241 ggcggccccttcgcgacgctggacatgaagtgcttcttccctggcggctatcagatgctg 300
Query: 800 ga---------ggcacagcagcgccagatgcttgccaccgagctgaacctcggctaccaa 850
|| ||||||||| ||||||||||| |||| ||||| |||||||||||||||
Sbjct: 301 gaagcgacggcggcacagcaccgccagatgctcaccactgagctaaacctcggctaccaa 360
Query: 851 ctggcgccgcctgacactgacgttgccaacaataaccctcagcagttctaaactggatcc 910
||||||| |||| || |||||| |||||||||||||||||| ||||||||||| | || |
Sbjct: 361 ctggcgctgcctaactctgacgctgccaacaataaccctcatcagttctaaaccgcatgc 420
Query: 911 atgaga--------aagccaactgtg--accgatggaagctggctgttg-cctctagatg 959
| |||| |||| ||||||| ||| ||||||||||||||||| ||||||| ||
Sbjct: 421 acgagaagcttttcaagcgaactgtgtgacccatggaagctggctgttgccctctagctg 480
Query: 960 atattggcttccataacct 978
| ||||||||||||||||
Sbjct: 481 ttcttggcttccataacct 499
Score = 61.9 bits (31), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 925 tgtgaccgatggaagctggctgttgcc-tctagatgatattggcttccataacctagctt 983
||||||| ||||||||||||||||||| ||||| || | |||||||||||||||| |
Sbjct: 445 tgtgacccatggaagctggctgttgccctctagctgttcttggcttccataacct----t 500
Query: 984 attatggtgtgtattgttgcctt-ttgtgtgtgattctcc 1022
||| || |||||||||||| | ||||||||||||||||
Sbjct: 501 attgtgatgtgtattgttgtgtacttgtgtgtgattctcc 540
>gb|BG411765.1|BG411765 OV2_37_G09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 511 bits (258), Expect = e-143
Identities = 500/577 (86%), Gaps = 34/577 (5%)
Strand = Plus / Plus
Query: 554 gagatcaattacatggccaaaagggagactgagcttcagaatgaccacatgaacctcagg 613
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gagatcaattacatggccaaaagggagactgaacttcagaatgaccacatgaacctcagg 60
Query: 614 accaagattgaggagggagagcaacagctgcagcaggtgactgtggcccagtctgtc--- 670
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 61 accaagattgaggagggagagcaacagctgcagcaggtgaccgtggcccggtctgtcgca 120
Query: 671 gcagcagcagctgccaccgacgtggagctgaatccgttcttggagatggataccaaatgc 730
||||||||||| |||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 121 gcagcagcagcagccaccaacgtggagctgaacccattcttggagatggataccaaatgc 180
Query: 731 ttcttccctggcggccccttcgcgacactggacatgaagtgcttcttccccggcagcttg 790
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 181 ttcttccctggcggccccttcgcgacgctggacatgaagtgcttcttccctggcggctat 240
Query: 791 cagatgctgga---------ggcacagcagcgccagatgcttgccaccgagctgaacctc 841
||||||||||| ||||||||| ||||||||||| |||| ||||| ||||||
Sbjct: 241 cagatgctggaagcgacggcggcacagcaccgccagatgctcaccactgagctaaacctc 300
Query: 842 ggctaccaactggcgccgcctgacactgacgttgccaacaataaccctcagcagttctaa 901
|||||||||||||||| |||| || |||||| |||||||||||||||||| |||||||||
Sbjct: 301 ggctaccaactggcgctgcctaactctgacgctgccaacaataaccctcatcagttctaa 360
Query: 902 actggatccatgaga--------aagccaactgtg--accgatggaagctggctgttg-c 950
|| | || || |||| |||| ||||||| ||| ||||||||||||||||| |
Sbjct: 361 accgcatgcacgagaagcttttcaagcgaactgtgtgacccatggaagctggctgttgcc 420
Query: 951 ctctagatgatattggcttccataacctagcttattatggtgtgtattgttgcct-tttg 1009
|||||| || | |||||||||||||| |||||| || |||||||||||| | |||
Sbjct: 421 ctctagctgttcttggcttccataac----cttattgtgatgtgtattgttgtgtacttg 476
Query: 1010 tgtgtgattctcctt-----actactgatggagaa-taaacctaatcgattgggcataat 1063
||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||
Sbjct: 477 tgtgtgattctccttgctactctactgatggagaactaaacctaatcgattagacataat 536
Query: 1064 gatcaaatgctacagcacccgtgaggctgtgatcagg 1100
||||||||||||||||| | |||||||| |||||||
Sbjct: 537 gatcaaatgctacagcatctatgaggctgcgatcagg 573
>gb|BE918286.1|BE918286 OV1_1_E07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 457
Score = 505 bits (255), Expect = e-141
Identities = 367/405 (90%), Gaps = 12/405 (2%)
Strand = Plus / Plus
Query: 511 catctctaagatcagggccaggaagagtgagctgctggctgccgagatcaattacatggc 570
|||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 1 catctctaaggtcagggccaggaagaatgagctgctggctgcggagatcaattacatggc 60
Query: 571 caaaagggagactgagcttcagaatgaccacatgaacctcaggaccaagattgaggaggg 630
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaagggagactgaacttcagaatgaccacatgaacctcaggaccaagattgaggaggg 120
Query: 631 agagcaacagctgcagcaggtgactgtggcccagtctgtc---gcagcagcagctgccac 687
|||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 121 agagcaacagctgcagcaggtgaccgtggcccggtctgtcgcagcagcagcagcagccac 180
Query: 688 cgacgtggagctgaatccgttcttggagatggataccaaatgcttcttccctggcggccc 747
| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caacgtggagctgaacccattcttggagatggataccaaatgcttcttccctggcggccc 240
Query: 748 cttcgcgacactggacatgaagtgcttcttccccggcagcttgcagatgctgga------ 801
||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 241 cttcgcgacgctggacatgaagtgcttcttccctggcggctatcagatgctggaagcgac 300
Query: 802 ---ggcacagcagcgccagatgcttgccaccgagctgaacctcggctaccaactggcgcc 858
||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 301 ggcggcacagcaccgccagatgctcaccactgagctaaacctcggctaccaactggcgct 360
Query: 859 gcctgacactgacgttgccaacaataaccctcagcagttctaaac 903
|||| || |||||| |||||||||||||||||| ||||| |||||
Sbjct: 361 gcctaactctgacgctgccaacaataaccctcatcagttataaac 405
>gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 288
Score = 398 bits (201), Expect = e-109
Identities = 245/257 (95%), Gaps = 2/257 (0%)
Strand = Plus / Plus
Query: 52 ttgcttgcaagtccaagaaact-gct-agagaggaacaagctgagatctccagcatgggg 109
|||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct: 32 ttgcttgcaagtccaagaaactagcagagagaggaacaagctgcgatctccagcatgggg 91
Query: 110 aggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 151
Query: 170 aagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgag 229
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 152 aagcgccgcaacgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgag 211
Query: 230 gtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtg 289
||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 212 gtggccctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtg 271
Query: 290 aaggctacgatcgagag 306
||||||||||| |||||
Sbjct: 272 aaggctacgattgagag 288
>gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 295
Score = 394 bits (199), Expect = e-108
Identities = 240/251 (95%), Gaps = 2/251 (0%)
Strand = Plus / Plus
Query: 52 ttgcttgcaagtccaagaaact-gct-agagaggaacaagctgagatctccagcatgggg 109
|||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||
Sbjct: 45 ttgcttgcaagtccaagaaactagcagagagaggaacaagctgcgatctccagcatgggg 104
Query: 110 aggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 cggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgc 164
Query: 170 aagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgag 229
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 165 aagcgccgcaacgggctcctcaagaaggcgtacgagctctccgtcctgtgcgacgccgag 224
Query: 230 gtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtg 289
||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 225 gtggccctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacagcgtg 284
Query: 290 aaggctacgat 300
|||||||||||
Sbjct: 285 aaggctacgat 295
>gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809866, DNA
sequence
Length = 713
Score = 337 bits (170), Expect = 1e-090
Identities = 191/198 (96%)
Strand = Plus / Minus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 597 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 538
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagct 207
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 537 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctcaagaaggcgtacgagct 478
Query: 208 ctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctcta 267
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 477 ctccgtcctgtgcgacgccgaggtggccctcatcgtcttctccagccgcggccgcctcta 418
Query: 268 cgagtacgccaacaacag 285
||||||||||||||||||
Sbjct: 417 cgagtacgccaacaacag 400
>gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524173, DNA
sequence
Length = 470
Score = 337 bits (170), Expect = 1e-090
Identities = 191/198 (96%)
Strand = Plus / Minus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 345 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 286
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagct 207
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 285 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctcaagaaggcgtacgagct 226
Query: 208 ctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctcta 267
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 225 ctccgtcctgtgcgacgccgaggtggccctcatcgtcttctccagccgcggccgcctcta 166
Query: 268 cgagtacgccaacaacag 285
||||||||||||||||||
Sbjct: 165 cgagtacgccaacaacag 148
>gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104678, DNA
sequence
Length = 621
Score = 337 bits (170), Expect = 1e-090
Identities = 191/198 (96%)
Strand = Plus / Minus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 466 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 407
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagct 207
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 406 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctcaagaaggcgtacgagct 347
Query: 208 ctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctcta 267
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 346 ctccgtcctgtgcgacgccgaggtggccctcatcgtcttctccagccgcggccgcctcta 287
Query: 268 cgagtacgccaacaacag 285
||||||||||||||||||
Sbjct: 286 cgagtacgccaacaacag 269
>gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113875, DNA
sequence
Length = 660
Score = 337 bits (170), Expect = 1e-090
Identities = 191/198 (96%)
Strand = Plus / Minus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 622 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 563
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagct 207
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 562 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctcaagaaggcgtacgagct 503
Query: 208 ctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctcta 267
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 502 ctccgtcctgtgcgacgccgaggtggccctcatcgtcttctccagccgcggccgcctcta 443
Query: 268 cgagtacgccaacaacag 285
||||||||||||||||||
Sbjct: 442 cgagtacgccaacaacag 425
>gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404091, DNA
sequence
Length = 618
Score = 337 bits (170), Expect = 1e-090
Identities = 191/198 (96%)
Strand = Plus / Minus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 595 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 536
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagct 207
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 535 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctcaagaaggcgtacgagct 476
Query: 208 ctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctcta 267
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 475 ctccgtcctgtgcgacgccgaggtggccctcatcgtcttctccagccgcggccgcctcta 416
Query: 268 cgagtacgccaacaacag 285
||||||||||||||||||
Sbjct: 415 cgagtacgccaacaacag 398
>gb|CW313121.1|CW313121 104_803_11471121_148_35790_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471121, DNA
sequence
Length = 628
Score = 337 bits (170), Expect = 1e-090
Identities = 331/384 (86%), Gaps = 23/384 (5%)
Strand = Plus / Minus
Query: 618 agattgaggagggagagcaacagctgcagcaggtgactgtggcccagtctgtcgcagcag 677
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 421 agattgaggagggagagcaacagctgcagcaggtgaccgtggcccggtctgtcgcagcag 362
Query: 678 cagctgc---caccgacgtggagctgaatccgttcttggagatggataccaaatgcttct 734
|||| || |||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 361 cagcagcagccaccaacgtggagctgaacccattcttggagatggataccaaatgcttct 302
Query: 735 tccctggcggccccttcgcgacactggacatgaagtgcttcttccccggcagcttgcaga 794
|||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| ||||
Sbjct: 301 tccctggcggccccttcgcgacgctggacatgaagtgcttcttccctggcggctatcaga 242
Query: 795 tgctgga---------ggcacagcagcgccagatgcttgccaccgagctgaacctcggct 845
||||||| ||||||||| ||||||||||| |||| ||||| ||||||||||
Sbjct: 241 tgctggaagcgacggcggcacagcaccgccagatgctcaccactgagctaaacctcggct 182
Query: 846 accaactggcgccgcctgacactgacgttgccaacaataaccctcagcagttctaaactg 905
|||||||||||| |||| || |||||| |||||||||||||||||| ||||||||||| |
Sbjct: 181 accaactggcgctgcctaactctgacgctgccaacaataaccctcatcagttctaaaccg 122
Query: 906 gatccatgaga--------aagccaactgtg--accgatggaagctggctgttg-cctct 954
|| || |||| |||| ||||||| ||| ||||||||||||||||| |||||
Sbjct: 121 catgcacgagaagcttttcaagcgaactgtgtgacccatggaagctggctgttgccctct 62
Query: 955 agatgatattggcttccataacct 978
|| || | ||||||||||||||||
Sbjct: 61 agctgttcttggcttccataacct 38
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 577 ggagactgagcttcagaatgaccacatgaacctcaggaccaag 619
||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 623 ggagactgaacttcagaatgaccacatgaacttcaggaccaag 581
Score = 60.0 bits (30), Expect = 5e-007
Identities = 68/79 (86%), Gaps = 5/79 (6%)
Strand = Plus / Minus
Query: 925 tgtgaccgatggaagctggctgttgcc-tctagatgatattggcttccataacctagctt 983
||||||| ||||||||||||||||||| ||||| || | |||||||||||||||| |
Sbjct: 92 tgtgacccatggaagctggctgttgccctctagctgttcttggcttccataacct----t 37
Query: 984 attatggtgtgtattgttg 1002
||| || ||||||||||||
Sbjct: 36 attgtgatgtgtattgttg 18
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 530
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 129 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 188
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 189 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 248
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 308
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 309 tgtgaagtccaccattgagaggtacaagaaggc 341
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 515
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 129 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 188
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 189 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 248
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 249 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 308
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 309 tgtgaagtccaccattgagaggtacaagaaggc 341
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 227 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 286
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 287 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 346
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 347 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 406
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 407 tgtgaagtccaccattgagaggtacaagaaggc 439
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 71 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 130
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 131 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 190
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 191 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 250
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 251 tgtgaagtccaccattgagaggtacaagaaggc 283
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 165 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 224
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 225 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 284
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 285 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 344
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 345 tgtgaagtccaccattgagaggtacaagaaggc 377
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 155 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 214
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 215 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 274
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 275 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 334
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 335 tgtgaagtccaccattgagaggtacaagaaggc 367
>gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 173 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 232
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 233 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 292
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 293 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 352
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 353 tgtgaagtccaccattgagaggtacaagaaggc 385
>gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 436
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 175 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 234
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 235 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 294
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 295 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 354
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 355 tgtgaagtccaccattgagaggtacaagaaggc 387
>gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 280 bits (141), Expect = 3e-073
Identities = 195/213 (91%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 131 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 190
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 191 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 250
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 251 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 310
Query: 286 tgtgaaggctacgatcgagaggtacaagaaggc 318
||||||| | || || |||||||||||||||||
Sbjct: 311 tgtgaagtccaccattgagaggtacaagaaggc 343
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 246 bits (124), Expect = 4e-063
Identities = 166/180 (92%)
Strand = Plus / Minus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 614 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 555
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 554 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 495
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 494 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 435
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 246 bits (124), Expect = 4e-063
Identities = 166/180 (92%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 350 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 409
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 410 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 469
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 470 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 529
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 246 bits (124), Expect = 4e-063
Identities = 166/180 (92%)
Strand = Plus / Minus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 324 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 265
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 264 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 205
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 145
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 246 bits (124), Expect = 4e-063
Identities = 166/180 (92%)
Strand = Plus / Minus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 467 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 408
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 407 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 348
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 347 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 288
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 246 bits (124), Expect = 4e-063
Identities = 166/180 (92%)
Strand = Plus / Plus
Query: 106 ggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacctt 165
||||||||| | ||| ||||||||| | |||||||||| ||||| |||||||||||||||
Sbjct: 334 ggggaggggcaagatcgagatcaagcgcatcgagaacaccacgaaccggcaggtcacctt 393
Query: 166 ctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgc 225
||||||||||||||| || |||||||||||||||||||||||||| || |||||||||||
Sbjct: 394 ctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgcgacgc 453
Query: 226 cgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 454 cgaggtcgcgctcatcgtcttctccagccgcggccgcctctacgagtacgccaacaacag 513
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 244 bits (123), Expect = 2e-062
Identities = 180/199 (90%)
Strand = Plus / Plus
Query: 121 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 180
|||||||||| | |||||||||| || | | ||||||| ||||||||||||||||||||
Sbjct: 305 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 364
Query: 181 tgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgt 240
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 365 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 424
Query: 241 cgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgat 300
|||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || ||
Sbjct: 425 cgtcttctccagccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccat 484
Query: 301 cgagaggtacaagaaggca 319
||||||||||||||||||
Sbjct: 485 tgagaggtacaagaaggca 503
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 244 bits (123), Expect = 2e-062
Identities = 180/199 (90%)
Strand = Plus / Plus
Query: 121 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 180
|||||||||| | |||||||||| || | | ||||||| ||||||||||||||||||||
Sbjct: 302 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 361
Query: 181 tgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgt 240
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 362 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 421
Query: 241 cgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgat 300
|||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || ||
Sbjct: 422 cgtcttctccagccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccat 481
Query: 301 cgagaggtacaagaaggca 319
||||||||||||||||||
Sbjct: 482 tgagaggtacaagaaggca 500
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 244 bits (123), Expect = 2e-062
Identities = 180/199 (90%)
Strand = Plus / Plus
Query: 121 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 180
|||||||||| | |||||||||| || | | ||||||| ||||||||||||||||||||
Sbjct: 302 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 361
Query: 181 tgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgt 240
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 362 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 421
Query: 241 cgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgat 300
|||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || ||
Sbjct: 422 cgtcttctccagccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccat 481
Query: 301 cgagaggtacaagaaggca 319
||||||||||||||||||
Sbjct: 482 tgagaggtacaagaaggca 500
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 244 bits (123), Expect = 2e-062
Identities = 180/199 (90%)
Strand = Plus / Plus
Query: 121 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 180
|||||||||| | |||||||||| || | | ||||||| ||||||||||||||||||||
Sbjct: 307 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 366
Query: 181 tgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgt 240
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 367 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 426
Query: 241 cgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgat 300
|||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || ||
Sbjct: 427 cgtcttctccagccgcggccgcctctacgagtactccaacaacagcgtgaaggccaccat 486
Query: 301 cgagaggtacaagaaggca 319
||||||||||||||||||
Sbjct: 487 tgagaggtacaagaaggca 505
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 208 bits (105), Expect = 9e-052
Identities = 150/165 (90%)
Strand = Plus / Plus
Query: 121 tgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaa 180
|||||||||| | |||||||||| || | | ||||||| ||||||||||||||||||||
Sbjct: 122 tgagatcaagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaa 181
Query: 181 tgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgt 240
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct: 182 cggcctcctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcat 241
Query: 241 cgtcttctccagccgcggacgcctctacgagtacgccaacaacag 285
|||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 242 cgtcttctccagccgcggccgcctctacgagtactccaacaacag 286
>gb|BG054220.1|BG054220 OV2_3_G05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 389
Score = 202 bits (102), Expect = 5e-050
Identities = 312/379 (82%), Gaps = 31/379 (8%)
Strand = Plus / Plus
Query: 749 ttcgcgacactggacatgaagtgcttcttccccggcagcttgcagatgctgga------- 801
|||||||| ||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 1 ttcgcgacgctggacatgaagtgcttcttccctggcggctatcagatgctggaagcgacg 60
Query: 802 --ggcacagcagcgccagatgcttgccaccgagctgaacctcggctaccaactggcgccg 859
||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||| |
Sbjct: 61 gcggcacagcaccgccagatgctcaccactgagctaaacctcggctaccaactggcgctg 120
Query: 860 cctgacactgacgttgccaacaataaccctcagcagttctaaactggatccatgaga--- 916
||| || |||||| |||||||||||||||||| ||||||||||| | || || ||||
Sbjct: 121 cctaactctgacgctgccaacaataaccctcatcagttctaaaccgcatgcacgagaagc 180
Query: 917 -----aagccaactgtg--accgatggaagctggctgttg-cctctagatgatattggct 968
|||| ||||||| ||| ||||||||||||||||| ||||||| || | ||||||
Sbjct: 181 ttttcaagcgaactgtgtgacccatggaagctggctgttgccctctagctgttcttggct 240
Query: 969 tccataacctagcttattatggtgtgtattgttgcct-tttgtgtgtgattctcctt--- 1024
|||||||| |||||| || |||||||||||| | ||||||||||||||||||
Sbjct: 241 tccataac----cttattgtgatgtgtattgttgtgtacttgtgtgtgattctccttgct 296
Query: 1025 --actactgatggagaa-taaacctaatcgattgggcataatgatcaaatgctacagcac 1081
|||||||||||||| ||||||||||||||| | |||||||||||||||||||||||
Sbjct: 297 actctactgatggagaactaaacctaatcgattagacataatgatcaaatgctacagcat 356
Query: 1082 ccgtgaggctgtgatcagg 1100
| |||||||| |||||||
Sbjct: 357 ctatgaggctgcgatcagg 375
>gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404091, DNA
sequence
Length = 637
Score = 180 bits (91), Expect = 2e-043
Identities = 100/103 (97%)
Strand = Plus / Plus
Query: 88 agctgagatctccagcatggggaggggaaggattgagatcaagaggatcgagaacaacac 147
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 535 agctgcgatctccagcatggggcggggaaggattgagatcaagaggatcgagaacaacac 594
Query: 148 gagccggcaggtcaccttctgcaagcgccgcaatgggctcctc 190
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 595 gagccggcaggtcaccttctgcaagcgccgcaacgggctcctc 637
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 159 bits (80), Expect = 7e-037
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
||||||||||||| | ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 44 catggggaggggacgagttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 103
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
||||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 104 cttctccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 163
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||||||||||
Sbjct: 164 cgccgaggtcgcgctcatcatcttctccagccgcgg 199
>gb|CW111570.1|CW111570 104_485_11104392_116_34538_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104392, DNA
sequence
Length = 587
Score = 155 bits (78), Expect = 1e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 434 aggcacttggttggtgactctgtgggaaacttgtcactcaaagagctgaagcagctggag 493
||||||||||| ||||| |||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 309 aggcacttggtcggtgattctgtgggaaacctgacactcaaggagctgaagcagctggag 368
Query: 494 agccgccttgagaaaggcatctctaagatcagggccaggaag 535
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 369 agccgccttgagaaaggcatctctaaggtcagggccaggaag 410
>gb|CW313120.1|CW313120 104_803_11471121_116_35786_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471121, DNA
sequence
Length = 608
Score = 155 bits (78), Expect = 1e-035
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 434 aggcacttggttggtgactctgtgggaaacttgtcactcaaagagctgaagcagctggag 493
||||||||||| ||||| |||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 176 aggcacttggtcggtgattctgtgggaaacctgacactcaaggagctgaagcagctggag 235
Query: 494 agccgccttgagaaaggcatctctaagatcagggccaggaag 535
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 236 agccgccttgagaaaggcatctctaaggtcagggccaggaag 277
Score = 73.8 bits (37), Expect = 3e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 538 tgagctgctggctgccgagatcaattacatggccaaaaggg 578
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 510 tgagctgctggctgcggagatcaattacatggccaaaaggg 550
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 552 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 493
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 492 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 433
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 432 cgccgaggtcgcgctcatcatcttctccaaccgcgg 397
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 552 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 493
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 492 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 433
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 432 cgccgaggtcgcgctcatcatcttctccaaccgcgg 397
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 183 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 124
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 123 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 64
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 63 cgccgaggtcgcgctcatcatcttctccaaccgcgg 28
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 185 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 244
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 245 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 304
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 305 cgccgaggtcgcgctcatcatcttctccaaccgcgg 340
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 182 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 241
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 242 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 301
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 302 cgccgaggtcgcgctcatcatcttctccaaccgcgg 337
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA,
complete cds
Length = 1055
Score = 151 bits (76), Expect = 2e-034
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || ||||| | ||| ||||||||||||| | | ||| ||||||||
Sbjct: 45 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 104
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 105 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 164
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 165 cgccgaggtcgcgctcatcatcttctccaaccgcgg 200
>gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155545, DNA
sequence
Length = 655
Score = 145 bits (73), Expect = 1e-032
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 149 agccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctc 208
||||| ||||||||||||| |||||||||||| || || ||||||||||||| |||||||
Sbjct: 598 agccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcgttcgagctc 539
Query: 209 tccgtcctctgcgacgccgaggtggcgctcgtcgtcttctc 249
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 538 tccgtcctctgcgacgccgaggtcgcgctcgtcgtcttctc 498
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Minus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 452 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 393
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 392 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 333
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 332 cgccgaggtcgcgctcatcatcttctccaaccgcgg 297
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 465 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 524
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 525 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 584
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcgg 620
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Minus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 705 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 646
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 645 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 586
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcgg 550
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 42 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 101
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 102 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 161
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 162 cgccgaggtcgcgctcatcatcttctccaaccgcgg 197
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 162 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 221
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 222 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 281
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 282 cgccgaggtcgcgctcatcatcttctccaaccgcgg 317
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 143 bits (72), Expect = 4e-032
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| || | ||| ||||| ||||||||||||| | | ||| ||||||||
Sbjct: 158 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 217
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
|||| |||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 218 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 277
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||||||||| |||||| || ||||||||| ||||||
Sbjct: 278 cgccgaggtcgcgctcatcatcttctccaaccgcgg 313
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 380,022
Number of Sequences: 832831
Number of extensions: 380022
Number of successful extensions: 105605
Number of sequences better than 0.5: 216
Number of HSP's better than 0.5 without gapping: 215
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 105231
Number of HSP's gapped (non-prelim): 328
length of query: 1168
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1148
effective length of database: 474,703,049
effective search space: 544959100252
effective search space used: 544959100252
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)