BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3390529.2.1
(407 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW925027.1|AW925027 WS1_74_E02.b1_A002 Water-stressed 1 ... 597 e-169
gb|BG357306.1|BG357306 OV2_12_C07.b1_A002 Ovary 2 (OV2) Sor... 597 e-169
gb|BI075853.1|BI075853 IP1_22_A10.b1_A002 Immature pannicle... 597 e-169
gb|CD220834.1|CD220834 CCC1_69_C06.g1_A007 Callus culture/c... 597 e-169
gb|CD427853.1|CD427853 ETH1_34_A03.g1_A002 Ethylene-treated... 597 e-169
gb|CD429487.1|CD429487 ETH1_4_C04.g1_A002 Ethylene-treated ... 597 e-169
gb|CD430254.1|CD430254 ETH1_17_E09.g1_A002 Ethylene-treated... 597 e-169
gb|CD464133.1|CD464133 ETH1_48_A05.g1_A002 Ethylene-treated... 597 e-169
gb|CN127191.1|CN127191 RHOH1_21_C06.g3_A002 Acid- and alkal... 597 e-169
gb|CN142236.1|CN142236 WOUND1_4_E05.g1_A002 Wounded leaves ... 597 e-169
gb|CN144350.1|CN144350 WOUND1_21_D10.g1_A002 Wounded leaves... 597 e-169
gb|CN133696.1|CN133696 OX1_17_F10.g1_A002 Oxidatively-stres... 591 e-167
gb|CD221081.1|CD221081 CCC1_73_C09.g1_A007 Callus culture/c... 589 e-167
gb|CD430032.1|CD430032 ETH1_13_H01.g1_A002 Ethylene-treated... 589 e-167
gb|CD462589.1|CD462589 ETH1_38_B12.g1_A002 Ethylene-treated... 589 e-167
gb|CD463307.1|CD463307 ETH1_43_G05.g1_A002 Ethylene-treated... 589 e-167
gb|CN130580.1|CN130580 RHOH1_42_A03.g1_A002 Acid- and alkal... 589 e-167
gb|BF704855.1|BF704855 FM1_52_D03.b1_A003 Floral-Induced Me... 583 e-165
gb|CF487755.1|CF487755 POL1_45_F01.g1_A002 Pollen Sorghum b... 581 e-164
gb|CN149754.1|CN149754 WOUND1_64_E04.g1_A002 Wounded leaves... 573 e-162
gb|CD220957.1|CD220957 CCC1_72_D02.g1_A007 Callus culture/c... 500 e-140
gb|CF429393.1|CF429393 PH1_21_D07.g1_A002 Phosphorous-defic... 500 e-140
gb|CN127104.1|CN127104 RHOH1_21_C06.b1_A002 Acid- and alkal... 432 e-119
gb|CN130503.1|CN130503 RHOH1_42_A03.b1_A002 Acid- and alkal... 335 2e-090
gb|CW050529.1|CW050529 104_290_10514713_114_30195 Sorghum m... 285 2e-075
gb|CW329140.1|CW329140 104_825_11479685_116_36006_021 Sorgh... 285 2e-075
gb|CW329141.1|CW329141 104_825_11479685_148_36005_021 Sorgh... 285 2e-075
gb|CN126663.1|CN126663 RHOH1_18_A09.g1_A002 Acid- and alkal... 163 2e-038
gb|CD463245.1|CD463245 ETH1_43_G05.b1_A002 Ethylene-treated... 159 2e-037
gb|CW247057.1|CW247057 104_708_11221593_148_35021_047 Sorgh... 153 1e-035
gb|CW050530.1|CW050530 104_290_10514713_115_30205 Sorghum m... 147 9e-034
gb|CW323528.1|CW323528 104_817_11476678_148_35959_083 Sorgh... 147 9e-034
gb|BG356971.1|BG356971 OV2_12_C07.g1_A002 Ovary 2 (OV2) Sor... 147 9e-034
gb|CW247056.1|CW247056 104_708_11221593_116_35017_047 Sorgh... 131 5e-029
gb|CN149667.1|CN149667 WOUND1_64_E04.b1_A002 Wounded leaves... 125 3e-027
gb|AW565301.1|AW565301 LG1_342_G03.g1_A002 Light Grown 1 (L... 115 3e-024
gb|CD429356.1|CD429356 ETH1_4_C04.b1_A002 Ethylene-treated ... 100 2e-019
gb|CD430119.1|CD430119 ETH1_17_E09.b1_A002 Ethylene-treated... 98 8e-019
gb|CD221056.1|CD221056 CCC1_73_C09.b1_A007 Callus culture/c... 92 5e-017
gb|CW064729.1|CW064729 104_311_10522734_115_30121 Sorghum m... 40 0.15
gb|CW320924.1|CW320924 104_814_11475271_116_36015_030 Sorgh... 40 0.15
gb|CW472663.1|CW472663 fsbb001f227l08f0 Sorghum methylation... 40 0.15
gb|CW483432.1|CW483432 fsbb001f245b07k0 Sorghum methylation... 40 0.15
>gb|AW925027.1|AW925027 WS1_74_E02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 446
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 66 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 125
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 126 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 185
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 186 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 245
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 246 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 305
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 306 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 365
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 366 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 418
>gb|BG357306.1|BG357306 OV2_12_C07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 522
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 146 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 205
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 265
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 266 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 325
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 326 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 385
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 386 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 445
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 446 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 498
>gb|BI075853.1|BI075853 IP1_22_A10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 456
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 81 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 140
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 141 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 200
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 260
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 320
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 321 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 380
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 381 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 433
>gb|CD220834.1|CD220834 CCC1_69_C06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_C06_A007 5', mRNA sequence
Length = 468
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 86 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 145
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 146 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 205
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 206 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 265
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 266 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 325
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 326 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 385
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 386 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 438
>gb|CD427853.1|CD427853 ETH1_34_A03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_A03_A002 5', mRNA sequence
Length = 514
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 58 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 117
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 118 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 177
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 178 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 237
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 238 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 297
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 298 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 357
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 358 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 410
>gb|CD429487.1|CD429487 ETH1_4_C04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_C04_A002 5', mRNA sequence
Length = 569
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 82 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 141
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 142 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 201
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 202 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 261
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 321
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 322 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 381
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 382 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 434
>gb|CD430254.1|CD430254 ETH1_17_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_E09_A002 5', mRNA sequence
Length = 641
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 95 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 154
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 155 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 214
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 215 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 274
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 275 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 334
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 335 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 394
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 395 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 447
>gb|CD464133.1|CD464133 ETH1_48_A05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_A05_A002 5', mRNA sequence
Length = 599
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 157 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 216
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 217 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 276
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 277 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 336
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 396
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 397 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 456
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 457 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 509
>gb|CN127191.1|CN127191 RHOH1_21_C06.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_C06_A002 5', mRNA sequence
Length = 806
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 151 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 210
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 211 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 270
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 271 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 330
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 331 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 390
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 391 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 450
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 451 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 503
>gb|CN142236.1|CN142236 WOUND1_4_E05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_4_E05_A002 5', mRNA sequence
Length = 720
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 153 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 212
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 213 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 272
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 273 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 332
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 333 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 392
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 393 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 452
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 453 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 505
>gb|CN144350.1|CN144350 WOUND1_21_D10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_21_D10_A002 5', mRNA sequence
Length = 752
Score = 597 bits (301), Expect = e-169
Identities = 340/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 80 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 139
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 140 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 199
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 200 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 259
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 319
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 320 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 379
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 380 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 432
>gb|CN133696.1|CN133696 OX1_17_F10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_17_F10_A002 5', mRNA sequence
Length = 662
Score = 591 bits (298), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 89 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 148
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 149 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 208
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 209 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 268
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 269 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 328
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 329 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 388
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 389 ggcgagcagtacgcggggaaagtgacggagaattgcgtggngttctggaaggc 441
>gb|CD221081.1|CD221081 CCC1_73_C09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_C09_A007 5', mRNA sequence
Length = 632
Score = 589 bits (297), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 88 atggccgtgccggaggtggtggtcgagggcgtcgccttcccgccggtggcccgcccgccg 147
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 148 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 207
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 208 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 267
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 268 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 327
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 328 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 387
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 388 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 440
>gb|CD430032.1|CD430032 ETH1_13_H01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_13_H01_A002 5', mRNA sequence
Length = 644
Score = 589 bits (297), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 157 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 216
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 217 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 276
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 277 aacttcatcaagttcacggccatcggcgtgtacctgaaggacgcggccgtgtccgcgctg 336
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 396
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 397 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 456
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 457 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 509
>gb|CD462589.1|CD462589 ETH1_38_B12.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_B12_A002 5', mRNA sequence
Length = 624
Score = 589 bits (297), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 81 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 140
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 141 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 200
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 260
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 320
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 321 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 380
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 381 ggcgagcagtacgcggggaaagtgactgagaattgcgtggcgttctggaaggc 433
>gb|CD463307.1|CD463307 ETH1_43_G05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_43_G05_A002 5', mRNA sequence
Length = 655
Score = 589 bits (297), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 82 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 141
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 142 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 201
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 202 aacttcatcaagttcacggccatcggcgtgtgcctggaggacgcggccgtgtccgcgctg 261
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 321
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 322 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 381
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 382 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 434
>gb|CN130580.1|CN130580 RHOH1_42_A03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_42_A03_A002 5', mRNA sequence
Length = 756
Score = 589 bits (297), Expect = e-167
Identities = 339/353 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 73 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 132
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 133 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 192
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 193 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 252
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 253 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 312
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| || ||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 313 gacgtcgtcacgggtgatttcgagaagttcacgagggtgaccatgctccttccgctcacg 372
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 373 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 425
>gb|BF704855.1|BF704855 FM1_52_D03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 456
Score = 583 bits (294), Expect = e-165
Identities = 336/350 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 116
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 117 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 176
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 177 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 236
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 237 gcgaagaagtgggccggcaagacagccgacgagctcgcgtccgacgccgccttcttccgc 296
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 297 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 356
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaa 404
|||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 357 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaa 406
>gb|CF487755.1|CF487755 POL1_45_F01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_45_F01_A002 5', mRNA sequence
Length = 630
Score = 581 bits (293), Expect = e-164
Identities = 338/353 (95%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 86 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 145
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 146 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 205
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 206 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 265
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 266 gcgaagaagtgggccgtcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 325
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
||||||||| |||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 326 gacgtcgtcgcgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 385
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 386 ggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 438
>gb|CN149754.1|CN149754 WOUND1_64_E04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_E04_A002 5', mRNA sequence
Length = 519
Score = 573 bits (289), Expect = e-162
Identities = 337/353 (95%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 43 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 102
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 103 ggctccgccggctcgcactccctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 162
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 163 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 222
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 223 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 282
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacg 354
|||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct: 283 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacg 342
Query: 355 ggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||||||||||| ||||||||| ||||| |||| |||||||||||||||
Sbjct: 343 ggcgagcagtacgcggggaaagtgaccgagaattgcgcggcgttctggaaggc 395
>gb|CD220957.1|CD220957 CCC1_72_D02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_72_D02_A007 5', mRNA sequence
Length = 495
Score = 500 bits (252), Expect = e-140
Identities = 285/296 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 200 atggccgtgccggaggtggtggtcgagggcgtcgtcctcccgccggtggcccgcccgccg 259
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 319
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 320 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 379
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 439
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgct 350
|||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 440 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgct 495
>gb|CF429393.1|CF429393 PH1_21_D07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_21_D07_A002 5', mRNA sequence
Length = 388
Score = 500 bits (252), Expect = e-140
Identities = 285/296 (96%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 91 atggccgtgccggaggtggtggtcgagggcgtcgtcatcccgccggtggcccgcccgccg 150
Query: 115 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcctcgagatcggaggc 174
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 151 ggctccgccggctcgcacttcctcggcggcgcaggcgtgcgaggcatcgagatcggaggc 210
Query: 175 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 211 aacttcatcaagttcacggccatcggcgtgtacctggaggacgcggccgtgtccgcgctg 270
Query: 235 gccaagaagtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgc 294
|| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 271 gcgaagaagtgggccggcaagacggccgacgagctcgcgtccgacgccgccttcttccgc 330
Query: 295 gacgtcgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgct 350
|||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 331 gacgtcgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgct 386
>gb|CN127104.1|CN127104 RHOH1_21_C06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_C06_A002 3', mRNA sequence
Length = 833
Score = 432 bits (218), Expect = e-119
Identities = 254/266 (95%)
Strand = Plus / Plus
Query: 142 ggcgcaggcgtgcgaggcctcgagatcggaggcaacttcatcaagttcacggccatcggc 201
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgcaggcgtgcgaggcatcgagatcggaggcaacttcatcaagttcacggccatcggc 60
Query: 202 gtgtacctggaggacgcggccgtgcccgcgctggccaagaagtggggcggcaagacggcc 261
|||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 61 gtgtacctggaggacgcggccgtgtccgcgctggcgaagaagtgggccggcaagacggcc 120
Query: 262 gacgagctcgcctccgacgccgccttcttccgcgacgtcgtcacgggcgacttcgagaag 321
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 gacgagctcgcgtccgacgccgccttcttccgcgacgtcgtcacgggtgacttcgagaag 180
Query: 322 ttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcggagaaagtgacg 381
|||||||||||||| ||| |||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 181 ttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcggggaaagtgacg 240
Query: 382 gagaactgcgtggcgttctggaaggc 407
||||| ||||||||||||||||||||
Sbjct: 241 gagaattgcgtggcgttctggaaggc 266
>gb|CN130503.1|CN130503 RHOH1_42_A03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_42_A03_A002 3', mRNA sequence
Length = 808
Score = 335 bits (169), Expect = 2e-090
Identities = 211/225 (93%)
Strand = Plus / Plus
Query: 183 caagttcacggccatcggcgtgtacctggaggacgcggccgtgcccgcgctggccaagaa 242
||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 1 caagttcacggccatcggcgtgtacctggaggacgcgcccgtgtccgcgctggcgaagaa 60
Query: 243 gtggggcggcaagacggccgacgagctcgcctccgacgccgccttcttccgcgacgtcgt 302
||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 gtgggccgccaagacggccgacgagctcgcgtccgacgccgccttcttccgcgacgtcgt 120
Query: 303 cacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagca 362
|||||| || ||||||||||||||||||||||| ||| |||| ||||| |||||||||||
Sbjct: 121 cacgggtgatttcgagaagttcacgagggtgaccatgctccttccgctcacgggcgagca 180
Query: 363 gtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
|||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 181 gtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 225
>gb|CW050529.1|CW050529 104_290_10514713_114_30195 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514713, DNA
sequence
Length = 583
Score = 285 bits (144), Expect = 2e-075
Identities = 159/164 (96%)
Strand = Plus / Plus
Query: 145 gcaggcgtgcgaggcctcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 204
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gcaggcgtgcgaggcatcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 282
Query: 205 tacctggaggacgcggccgtgcccgcgctggccaagaagtggggcggcaagacggccgac 264
||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 283 tacctggaggacgcggccgtgtccgcgctggcgaagaagtgggccggcaagacggccgac 342
Query: 265 gagctcgcctccgacgccgccttcttccgcgacgtcgtcacggg 308
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 343 gagctcgcgtccgacgccgccttcttccgcgacgtcgtcacggg 386
Score = 180 bits (91), Expect = 7e-044
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 12 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 71
Query: 115 ggctccgccggctcgcacttcctcggcggcgcagg 149
|||||||||||||||||||||||||||||||||||
Sbjct: 72 ggctccgccggctcgcacttcctcggcggcgcagg 106
>gb|CW329140.1|CW329140 104_825_11479685_116_36006_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479685, DNA
sequence
Length = 683
Score = 285 bits (144), Expect = 2e-075
Identities = 159/164 (96%)
Strand = Plus / Plus
Query: 145 gcaggcgtgcgaggcctcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 204
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gcaggcgtgcgaggcatcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 473
Query: 205 tacctggaggacgcggccgtgcccgcgctggccaagaagtggggcggcaagacggccgac 264
||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 474 tacctggaggacgcggccgtgtccgcgctggcgaagaagtgggccggcaagacggccgac 533
Query: 265 gagctcgcctccgacgccgccttcttccgcgacgtcgtcacggg 308
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 534 gagctcgcgtccgacgccgccttcttccgcgacgtcgtcacggg 577
Score = 180 bits (91), Expect = 7e-044
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203 atggccgtgccggaggtggtggtcgagggcgtcgtcttcccgccggtggcccgcccgccg 262
Query: 115 ggctccgccggctcgcacttcctcggcggcgcagg 149
|||||||||||||||||||||||||||||||||||
Sbjct: 263 ggctccgccggctcgcacttcctcggcggcgcagg 297
>gb|CW329141.1|CW329141 104_825_11479685_148_36005_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479685, DNA
sequence
Length = 625
Score = 285 bits (144), Expect = 2e-075
Identities = 159/164 (96%)
Strand = Plus / Minus
Query: 145 gcaggcgtgcgaggcctcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 204
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcaggcgtgcgaggcatcgagatcggaggcaacttcatcaagttcacggccatcggcgtg 552
Query: 205 tacctggaggacgcggccgtgcccgcgctggccaagaagtggggcggcaagacggccgac 264
||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct: 551 tacctggaggacgcggccgtgtccgcgctggcgaagaagtgggccggcaagacggccgac 492
Query: 265 gagctcgcctccgacgccgccttcttccgcgacgtcgtcacggg 308
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 491 gagctcgcgtccgacgccgccttcttccgcgacgtcgtcacggg 448
Score = 147 bits (74), Expect = 9e-034
Identities = 92/98 (93%)
Strand = Plus / Minus
Query: 310 gacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcg 369
|||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 215 gacttcgagaagttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcg 156
Query: 370 gagaaagtgacggagaactgcgtggcgttctggaaggc 407
| ||||||||||||||| ||||||||||||||||||||
Sbjct: 155 gggaaagtgacggagaattgcgtggcgttctggaaggc 118
>gb|CN126663.1|CN126663 RHOH1_18_A09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_A09_A002 5', mRNA sequence
Length = 163
Score = 163 bits (82), Expect = 2e-038
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 74 atggccgtgccggaggtggtggtcgagggcgtcatcttcccgccggtggcccgcccgccg 133
Query: 115 ggctccgccggctcgcacttcctcggcggc 144
||||||||||||||||||||||||||||||
Sbjct: 134 ggctccgccggctcgcacttcctcggcggc 163
>gb|CD463245.1|CD463245 ETH1_43_G05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_43_G05_A002 3', mRNA sequence
Length = 686
Score = 159 bits (80), Expect = 2e-037
Identities = 101/108 (93%)
Strand = Plus / Plus
Query: 300 cgtcacgggcgacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcga 359
||||||||| |||||||||||||||||||||||||| ||| |||| ||||| ||||||||
Sbjct: 1 cgtcacgggtgacttcgagaagttcacgagggtgaccatgctccttccgctcacgggcga 60
Query: 360 gcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 61 gcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 108
>gb|CW247057.1|CW247057 104_708_11221593_148_35021_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221593, DNA
sequence
Length = 544
Score = 153 bits (77), Expect = 1e-035
Identities = 89/93 (95%)
Strand = Plus / Plus
Query: 55 atggccgtgccggaggtggtggtcgacggcgtcgtcttcccgccggtggcccgcccgccg 114
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 280 atggccgtgccggacgcggtggtcgagggcgtcgtcttcccgccggtggcccgccagccg 339
Query: 115 ggctccgccggctcgcacttcctcggcggcgca 147
|||||||||||||||||||||||||||||||||
Sbjct: 340 ggctccgccggctcgcacttcctcggcggcgca 372
Score = 83.8 bits (42), Expect = 1e-014
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 145 gcaggcgtgcgaggcctcgagatcggaggcaacttcatcaagttcacggccatc 198
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcaggcttgcgatgcatcgagatcggaggcaacttcatcaagttcacggccatc 544
>gb|CW050530.1|CW050530 104_290_10514713_115_30205 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514713, DNA
sequence
Length = 462
Score = 147 bits (74), Expect = 9e-034
Identities = 92/98 (93%)
Strand = Plus / Minus
Query: 310 gacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcg 369
|||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 226 gacttcgagaagttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcg 167
Query: 370 gagaaagtgacggagaactgcgtggcgttctggaaggc 407
| ||||||||||||||| ||||||||||||||||||||
Sbjct: 166 gggaaagtgacggagaattgcgtggcgttctggaaggc 129
>gb|CW323528.1|CW323528 104_817_11476678_148_35959_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476678, DNA
sequence
Length = 588
Score = 147 bits (74), Expect = 9e-034
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 310 gacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcg 369
|||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 145 gacttcgagaagttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcg 204
Query: 370 gagaaagtgacggagaactgcgtggcgttctggaaggc 407
| ||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gggaaagtgacggagaattgcgtggcgttctggaaggc 242
>gb|BG356971.1|BG356971 OV2_12_C07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 147 bits (74), Expect = 9e-034
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 310 gacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcg 369
|||||||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 3 gacttcgagaagttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcg 62
Query: 370 gagaaagtgacggagaactgcgtggcgttctggaaggc 407
| ||||||||||||||| ||||||||||||||||||||
Sbjct: 63 gggaaagtgacggagaattgcgtggcgttctggaaggc 100
>gb|CW247056.1|CW247056 104_708_11221593_116_35017_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221593, DNA
sequence
Length = 586
Score = 131 bits (66), Expect = 5e-029
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 310 gacttcgagaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcg 369
||||||||||||||| |||||||||| ||| |||| ||||| ||||||||||||||||||
Sbjct: 573 gacttcgagaagttctcgagggtgaccatgctccttccgctcacgggcgagcagtacgcg 514
Query: 370 gagaaagtgacggagaactgcgtggcgttctggaaggc 407
| ||||||||||||||| |||||||||||| |||||||
Sbjct: 513 gggaaagtgacggagaattgcgtggcgttccggaaggc 476
>gb|CN149667.1|CN149667 WOUND1_64_E04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_E04_A002 3', mRNA sequence
Length = 754
Score = 125 bits (63), Expect = 3e-027
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 317 agaagttcacgagggtgacgatgatcctcccgctgacgggcgagcagtacgcggagaaag 376
||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||| |||||
Sbjct: 1 agaagttcacgagggtgaccatgctccttccgctcacgggcgagcagtacgcggggaaag 60
Query: 377 tgacggagaactgcgtggcgttctggaaggc 407
|||||||||| |||| |||||||||||||||
Sbjct: 61 tgacggagaattgcgcggcgttctggaaggc 91
>gb|AW565301.1|AW565301 LG1_342_G03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 115 bits (58), Expect = 3e-024
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 326 cgagggtgacgatgatcctcccgctgacgggcgagcagtacgcggagaaagtgacggaga 385
|||||||||| ||| |||| ||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 1 cgagggtgaccatgctccttccgctcacgggcgagcagtacgcggggaaagtgacggaga 60
Query: 386 actgcgtggcgttctggaaggc 407
| ||||||||||||||||||||
Sbjct: 61 attgcgtggcgttctggaaggc 82
>gb|CD429356.1|CD429356 ETH1_4_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_C04_A002 3', mRNA sequence
Length = 642
Score = 99.6 bits (50), Expect = 2e-019
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 346 ccgctgacgggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaag 405
||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 1 ccgctcacgggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaag 60
Query: 406 gc 407
||
Sbjct: 61 gc 62
>gb|CD430119.1|CD430119 ETH1_17_E09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_E09_A002 3', mRNA sequence
Length = 587
Score = 97.6 bits (49), Expect = 8e-019
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 347 cgctgacgggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaagg 406
|||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 1 cgctcacgggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaagg 60
Query: 407 c 407
|
Sbjct: 61 c 61
>gb|CD221056.1|CD221056 CCC1_73_C09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_C09_A007 3', mRNA sequence
Length = 613
Score = 91.7 bits (46), Expect = 5e-017
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 354 gggcgagcagtacgcggagaaagtgacggagaactgcgtggcgttctggaaggc 407
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gggcgagcagtacgcggggaaagtgacggagaattgcgtggcgttctggaaggc 54
>gb|CW064729.1|CW064729 104_311_10522734_115_30121 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522734, DNA
sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.15
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 276 cgacgccgccttcttccgcg 295
||||||||||||||||||||
Sbjct: 200 cgacgccgccttcttccgcg 181
>gb|CW320924.1|CW320924 104_814_11475271_116_36015_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475271, DNA
sequence
Length = 732
Score = 40.1 bits (20), Expect = 0.15
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 276 cgacgccgccttcttccgcg 295
||||||||||||||||||||
Sbjct: 431 cgacgccgccttcttccgcg 412
>gb|CW472663.1|CW472663 fsbb001f227l08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f227l08, DNA
sequence
Length = 602
Score = 40.1 bits (20), Expect = 0.15
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 276 cgacgccgccttcttccgcg 295
||||||||||||||||||||
Sbjct: 508 cgacgccgccttcttccgcg 527
>gb|CW483432.1|CW483432 fsbb001f245b07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245b07, DNA
sequence
Length = 798
Score = 40.1 bits (20), Expect = 0.15
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 139 ggcggcgcaggcgtgcgagg 158
||||||||||||||||||||
Sbjct: 438 ggcggcgcaggcgtgcgagg 419
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 154,728
Number of Sequences: 832831
Number of extensions: 154728
Number of successful extensions: 46713
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46666
Number of HSP's gapped (non-prelim): 47
length of query: 407
length of database: 491,359,669
effective HSP length: 19
effective length of query: 388
effective length of database: 475,535,880
effective search space: 184507921440
effective search space used: 184507921440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)