BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276111.2.1
(1393 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW059089.1|CW059089 104_301_10519111_114_30160 Sorghum m... 729 0.0
gb|CW158105.1|CW158105 104_561_11147877_148_36388_083 Sorgh... 664 0.0
gb|BG048288.1|BG048288 OV1_16_C10.g1_A002 Ovary 1 (OV1) Sor... 482 e-134
gb|CW059090.1|CW059090 104_301_10519111_115_30164 Sorghum m... 416 e-114
gb|CW444220.1|CW444220 fsbb001f164l08k0 Sorghum methylation... 416 e-114
gb|BG240519.1|BG240519 OV1_31_A03.b1_A002 Ovary 1 (OV1) Sor... 416 e-114
gb|BM317851.1|BM317851 OV1_16_C10.b9_A002 Ovary 1 (OV1) Sor... 400 e-109
gb|BG239941.1|BG239941 OV1_31_A03.g1_A002 Ovary 1 (OV1) Sor... 280 3e-073
gb|BG240636.1|BG240636 OV1_32_D02.b1_A002 Ovary 1 (OV1) Sor... 248 1e-063
gb|BG933604.1|BG933604 OV1_32_D02.g1_A002 Ovary 1 (OV1) Sor... 248 1e-063
gb|CW027204.1|CW027204 104_253_10498377_114_30532 Sorghum m... 100 7e-019
gb|CW263360.1|CW263360 104_731_11230647_116_35213_056 Sorgh... 88 3e-015
gb|CL189948.1|CL189948 104_407_10905735_114_32477_054 Sorgh... 76 1e-011
gb|CL189949.1|CL189949 104_407_10905735_116_32481_054 Sorgh... 76 1e-011
gb|CW216094.1|CW216094 104_648_11194930_116_37120_035 Sorgh... 76 1e-011
gb|CW220225.1|CW220225 104_654_11197238_148_37151_051 Sorgh... 76 1e-011
gb|CW230934.1|CW230934 104_680_11210859_148_37339_016 Sorgh... 76 1e-011
gb|CW296838.1|CW296838 104_778_11461727_116_35630_084 Sorgh... 76 1e-011
gb|CW303448.1|CW303448 104_788_11465244_116_35692_048 Sorgh... 76 1e-011
gb|CD224053.1|CD224053 CCC1_31_A07.g1_A007 Callus culture/c... 76 1e-011
gb|CW029241.1|CW029241 104_256_10499562_114_30399 Sorghum m... 74 4e-011
gb|CW129786.1|CW129786 104_512_11114754_148_34773_079 Sorgh... 74 4e-011
gb|CW241171.1|CW241171 104_700_11218620_148_37541_044 Sorgh... 74 4e-011
gb|CW365196.1|CW365196 fsbb001f037j24f0 Sorghum methylation... 74 4e-011
gb|CN129042.1|CN129042 RHOH1_33_D12.b3_A002 Acid- and alkal... 74 4e-011
gb|CN129126.1|CN129126 RHOH1_33_D12.g1_A002 Acid- and alkal... 74 4e-011
gb|CN129217.1|CN129217 RHOH1_34_D12.b3_A002 Acid- and alkal... 74 4e-011
gb|CN129305.1|CN129305 RHOH1_34_D12.g1_A002 Acid- and alkal... 74 4e-011
gb|CW252102.1|CW252102 104_715_11224308_148_35093_048 Sorgh... 72 2e-010
gb|CW313071.1|CW313071 104_803_11471096_116_35785_028 Sorgh... 72 2e-010
gb|CW356149.1|CW356149 fsbb001f021b12k0 Sorghum methylation... 72 2e-010
gb|CL191862.1|CL191862 104_414_10939844_114_32246_076 Sorgh... 70 6e-010
gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum m... 70 6e-010
gb|CW165466.1|CW165466 104_573_11152520_116_36471_018 Sorgh... 70 6e-010
gb|CW378672.1|CW378672 fsbb001f057i18k0 Sorghum methylation... 70 6e-010
gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation... 70 6e-010
gb|CW444219.1|CW444219 fsbb001f164l08f0 Sorghum methylation... 70 6e-010
gb|CW453444.1|CW453444 fsbb001f197h05k0 Sorghum methylation... 70 6e-010
gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation... 70 6e-010
gb|BE125214.1|BE125214 DG1_16_H11.b1_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BE125370.1|BE125370 DG1_20_A12.b1_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BE125550.1|BE125550 DG1_28_A12.b1_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BE355591.1|BE355591 DG1_115_B07.b1_A002 Dark Grown 1 (DG... 70 6e-010
gb|BE357460.1|BE357460 DG1_20_A12.b2_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BE358197.1|BE358197 DG1_26_C07.b2_A002 Dark Grown 1 (DG1... 70 6e-010
gb|BF177182.1|BF177182 EM1_2_G05.b1_A002 Embryo 1 (EM1) Sor... 70 6e-010
gb|CD223573.1|CD223573 CCC1_28_C04.g1_A007 Callus culture/c... 70 6e-010
gb|CD227768.1|CD227768 CCC1_53_G12.g1_A007 Callus culture/c... 70 6e-010
gb|CX611431.1|CX611431 ANR1_24_D02.g1_A002 Anaerobic roots ... 70 6e-010
gb|CW494483.1|CW494483 fsbb001f285m17f0 Sorghum methylation... 68 2e-009
gb|CW145901.1|CW145901 104_538_11138707_148_34980_070 Sorgh... 66 9e-009
gb|CW230933.1|CW230933 104_680_11210859_116_37343_016 Sorgh... 66 9e-009
gb|CW250598.1|CW250598 104_712_11223479_116_35050_082 Sorgh... 66 9e-009
gb|CW252101.1|CW252101 104_715_11224308_116_35097_048 Sorgh... 64 4e-008
gb|AW680833.1|AW680833 WS1_7_A02.g1_A002 Water-stressed 1 (... 62 1e-007
gb|BE595704.1|BE595704 PI1_55_F10.g1_A002 Pathogen induced ... 62 1e-007
gb|BM327931.1|BM327931 PIC1_19_B10.g1_A002 Pathogen-infecte... 62 1e-007
gb|CB928194.1|CB928194 ABA1_37_H04.b1_A012 Abscisic acid-tr... 62 1e-007
gb|CD203811.1|CD203811 HS1_2_G07.b1_A012 Heat-shocked seedl... 62 1e-007
gb|CD208510.1|CD208510 HS1_38_A10.b1_A012 Heat-shocked seed... 62 1e-007
gb|CD430945.1|CD430945 ETH1_6_G04.b1_A002 Ethylene-treated ... 62 1e-007
gb|CF428096.1|CF428096 PH1_12_C06.g1_A002 Phosphorous-defic... 62 1e-007
gb|CF429374.1|CF429374 PH1_21_E04.g1_A002 Phosphorous-defic... 62 1e-007
gb|CF756733.1|CF756733 DSAF1_8_E10.g1_A011 Drought-stressed... 62 1e-007
gb|CF756847.1|CF756847 DSAF1_10_C10.g1_A011 Drought-stresse... 62 1e-007
gb|CX611343.1|CX611343 ANR1_24_D02.b1_A002 Anaerobic roots ... 62 1e-007
gb|CW058583.1|CW058583 104_301_10518818_114_30158 Sorghum m... 58 2e-006
gb|CW058584.1|CW058584 104_301_10518818_115_30164 Sorghum m... 58 2e-006
gb|CW071662.1|CW071662 104_323_10591624_114_30474 Sorghum m... 58 2e-006
gb|CW166562.1|CW166562 104_575_11153119_148_36767_026 Sorgh... 58 2e-006
gb|CW166564.1|CW166564 104_575_11153120_148_36766_026 Sorgh... 58 2e-006
gb|CW295800.1|CW295800 104_777_11461144_116_35623_060 Sorgh... 58 2e-006
gb|CW398250.1|CW398250 fsbb001f087j18f0 Sorghum methylation... 58 2e-006
gb|CW461362.1|CW461362 fsbb001f208p19f0 Sorghum methylation... 58 2e-006
gb|CL153949.1|CL153949 104_338_10781058_114_31369_306 Sorgh... 56 9e-006
gb|CL153950.1|CL153950 104_338_10781058_116_31370_306 Sorgh... 56 9e-006
gb|CL177995.1|CL177995 104_385_10894245_116_31914_309 Sorgh... 56 9e-006
gb|CW413464.1|CW413464 fsbb001f112k05f0 Sorghum methylation... 56 9e-006
gb|BG053668.1|BG053668 RHIZ2_8_C07.b1_A003 Rhizome2 (RHIZ2)... 56 9e-006
gb|CW212544.1|CW212544 104_643_11191078_148_37020_083 Sorgh... 54 4e-005
gb|CW213446.1|CW213446 104_645_11191549_148_37035_063 Sorgh... 54 4e-005
gb|CW286711.1|CW286711 104_764_11411032_148_35520_056 Sorgh... 54 4e-005
gb|CW313072.1|CW313072 104_803_11471096_148_35789_028 Sorgh... 54 4e-005
gb|CD462818.1|CD462818 ETH1_40_G12.b1_A002 Ethylene-treated... 54 4e-005
gb|CX613681.1|CX613681 GABR1_9_C10.g1_A002 GA- or brassinol... 54 4e-005
gb|CL160524.1|CL160524 104_351_10805051_114_31824_107 Sorgh... 52 1e-004
gb|CW068361.1|CW068361 104_317_10525083_1_30096 Sorghum met... 52 1e-004
gb|CW263899.1|CW263899 104_732_11230980_148_35238_042 Sorgh... 52 1e-004
gb|CW300392.1|CW300392 104_783_11463632_116_36252_020 Sorgh... 52 1e-004
gb|BF480850.1|BF480850 FM1_14_B02.g1_A003 Floral-Induced Me... 52 1e-004
gb|BF481177.1|BF481177 FM1_17_D04.g1_A003 Floral-Induced Me... 52 1e-004
gb|BG050507.1|BG050507 FM1_70_C06.g1_A003 Floral-Induced Me... 52 1e-004
gb|BG051257.1|BG051257 FM1_54_B10.g1_A003 Floral-Induced Me... 52 1e-004
gb|BG051445.1|BG051445 FM1_56_E09.g1_A003 Floral-Induced Me... 52 1e-004
gb|BG051716.1|BG051716 FM1_60_D08.g1_A003 Floral-Induced Me... 52 1e-004
gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region,... 52 1e-004
gb|CW119932.1|CW119932 104_497_11109041_148_34644_077 Sorgh... 50 6e-004
gb|CW125826.1|CW125826 104_506_11112548_148_34725_076 Sorgh... 50 6e-004
gb|CW127181.1|CW127181 104_508_11113298_116_34741_011 Sorgh... 50 6e-004
gb|CW160702.1|CW160702 104_567_11150024_148_36508_026 Sorgh... 50 6e-004
gb|CW163652.1|CW163652 104_571_11151575_148_36454_090 Sorgh... 50 6e-004
gb|CW265142.1|CW265142 104_734_11231699_116_35259_044 Sorgh... 50 6e-004
gb|CW428753.1|CW428753 fsbb001f141k04f0 Sorghum methylation... 50 6e-004
gb|CW438908.1|CW438908 fsbb001f156m13f0 Sorghum methylation... 50 6e-004
gb|CW241170.1|CW241170 104_700_11218620_116_37546_044 Sorgh... 48 0.002
gb|BZ329505.1|BZ329505 hv86c10.b1 WGS-SbicolorF (JM107 adap... 46 0.009
gb|CW097035.1|CW097035 104_463_11002232_116_34345_032 Sorgh... 46 0.009
gb|CW105700.1|CW105700 104_475_11013016_116_34457_064 Sorgh... 46 0.009
gb|CW197144.1|CW197144 104_621_11181532_148_36823_010 Sorgh... 46 0.009
gb|CW238807.1|CW238807 104_695_11216932_116_37418_002 Sorgh... 46 0.009
gb|CW281042.1|CW281042 104_756_11407957_116_35451_055 Sorgh... 46 0.009
gb|CB925017.1|CB925017 ABA1_29_H06.g1_A012 Abscisic acid-tr... 46 0.009
gb|CB925959.1|CB925959 ABA1_30_C08.g1_A012 Abscisic acid-tr... 46 0.009
gb|CB927883.1|CB927883 ABA1_34_F07.g1_A012 Abscisic acid-tr... 46 0.009
gb|CB928697.1|CB928697 ABA1_17_G06.g1_A012 Abscisic acid-tr... 46 0.009
gb|CD204097.1|CD204097 HS1_3_G09.g1_A012 Heat-shocked seedl... 46 0.009
gb|CD207918.1|CD207918 HS1_35_G10.g1_A012 Heat-shocked seed... 46 0.009
gb|CD210806.1|CD210806 HS1_49_G08.g1_A012 Heat-shocked seed... 46 0.009
gb|CD232626.1|CD232626 SS1_46_F05.g1_A012 Salt-stressed see... 46 0.009
gb|CD234466.1|CD234466 SS1_27_H05.g1_A012 Salt-stressed see... 46 0.009
gb|CD235015.1|CD235015 SS1_19_G11.g1_A012 Salt-stressed see... 46 0.009
gb|CD423343.1|CD423343 SA1_28_D08.g1_A002 Salicylic acid-tr... 46 0.009
gb|CD423355.1|CD423355 SA1_28_C07.g1_A002 Salicylic acid-tr... 46 0.009
gb|CD426108.1|CD426108 SA1_16_A07.g1_A002 Salicylic acid-tr... 46 0.009
gb|CD426262.1|CD426262 SA1_19_E06.g1_A002 Salicylic acid-tr... 46 0.009
gb|CD428257.1|CD428257 ETH1_28_D09.g1_A002 Ethylene-treated... 46 0.009
gb|CD428262.1|CD428262 ETH1_28_F06.g1_A002 Ethylene-treated... 46 0.009
gb|CD431389.1|CD431389 ETH1_8_A09.g1_A002 Ethylene-treated ... 46 0.009
gb|CF429325.1|CF429325 PH1_21_E04.b1_A002 Phosphorous-defic... 46 0.009
gb|CF434379.1|CF434379 NIT1_29_H12.g1_A002 Nitrogen-deficie... 46 0.009
gb|CF760727.1|CF760727 DSAF1_65_D07.b1_A011 Drought-stresse... 46 0.009
gb|CF770470.1|CF770470 DSBF1_8_A09.b1_A010 Drought-stressed... 46 0.009
gb|CN125561.1|CN125561 RHOH1_11_G07.g1_A002 Acid- and alkal... 46 0.009
gb|CN141756.1|CN141756 WOUND1_1_D11.g1_A002 Wounded leaves ... 46 0.009
gb|CN141947.1|CN141947 WOUND1_2_H01.g1_A002 Wounded leaves ... 46 0.009
gb|CN143149.1|CN143149 WOUND1_14_A07.g1_A002 Wounded leaves... 46 0.009
gb|CN143665.1|CN143665 WOUND1_17_D08.g1_A002 Wounded leaves... 46 0.009
gb|CN146092.1|CN146092 WOUND1_37_B08.g1_A002 Wounded leaves... 46 0.009
gb|CN147568.1|CN147568 WOUND1_50_C10.g1_A002 Wounded leaves... 46 0.009
gb|CN147617.1|CN147617 WOUND1_50_G11.g1_A002 Wounded leaves... 46 0.009
gb|CN148014.1|CN148014 WOUND1_53_E04.g1_A002 Wounded leaves... 46 0.009
gb|CN148466.1|CN148466 WOUND1_56_E11.g1_A002 Wounded leaves... 46 0.009
gb|CN148737.1|CN148737 WOUND1_58_B03.g1_A002 Wounded leaves... 46 0.009
gb|CN149620.1|CN149620 WOUND1_63_H06.g1_A002 Wounded leaves... 46 0.009
gb|CN149898.1|CN149898 WOUND1_65_C10.g1_A002 Wounded leaves... 46 0.009
gb|CN150189.1|CN150189 WOUND1_67_C02.g1_A002 Wounded leaves... 46 0.009
gb|CN150349.1|CN150349 WOUND1_68_C02.g1_A002 Wounded leaves... 46 0.009
gb|CN151098.1|CN151098 WOUND1_73_A01.g1_A002 Wounded leaves... 46 0.009
gb|CN152247.1|CN152247 WOUND1_80_G05.g1_A002 Wounded leaves... 46 0.009
gb|CX606946.1|CX606946 ANR1_5_G07.g1_A002 Anaerobic roots S... 46 0.009
gb|CX613328.1|CX613328 GABR1_7_C03.g1_A002 GA- or brassinol... 46 0.009
gb|CX613352.1|CX613352 GABR1_7_E04.g1_A002 GA- or brassinol... 46 0.009
gb|CX613380.1|CX613380 GABR1_7_G09.g1_A002 GA- or brassinol... 46 0.009
gb|CX613832.1|CX613832 GABR1_10_A09.g1_A002 GA- or brassino... 46 0.009
gb|BZ329421.1|BZ329421 hv85g09.b1 WGS-SbicolorF (JM107 adap... 44 0.034
gb|BZ329422.1|BZ329422 hv85g09.g1 WGS-SbicolorF (JM107 adap... 44 0.034
gb|CW031142.1|CW031142 104_259_10500633_116_30398 Sorghum m... 44 0.034
gb|CW165467.1|CW165467 104_573_11152520_148_36474_018 Sorgh... 44 0.034
gb|CW212543.1|CW212543 104_643_11191078_116_37021_083 Sorgh... 44 0.034
gb|CW213445.1|CW213445 104_645_11191549_116_37034_063 Sorgh... 44 0.034
gb|CW270328.1|CW270328 104_741_11402351_116_35324_082 Sorgh... 44 0.034
gb|CW288243.1|CW288243 104_766_11411847_116_35531_054 Sorgh... 44 0.034
gb|CW288244.1|CW288244 104_766_11411847_148_35535_054 Sorgh... 44 0.034
gb|CW479420.1|CW479420 fsbb001f237o13k0 Sorghum methylation... 44 0.034
gb|AW922365.1|AW922365 DG1_18_D09.g1_A002 Dark Grown 1 (DG1... 44 0.034
gb|BE359044.1|BE359044 DG1_38_B01.b1_A002 Dark Grown 1 (DG1... 44 0.034
gb|BE359118.1|BE359118 DG1_38_B01.g1_A002 Dark Grown 1 (DG1... 44 0.034
gb|BE359203.1|BE359203 DG1_39_A01.g1_A002 Dark Grown 1 (DG1... 44 0.034
gb|BE361237.1|BE361237 DG1_70_B12.g1_A002 Dark Grown 1 (DG1... 44 0.034
gb|BF176756.1|BF176756 EM1_4_G05.g1_A002 Embryo 1 (EM1) Sor... 44 0.034
gb|BG049618.1|BG049618 EM1_6_F09.g1_A002 Embryo 1 (EM1) Sor... 44 0.034
gb|BG052518.1|BG052518 RHIZ2_26_B08.g1_A003 Rhizome2 (RHIZ2... 44 0.034
gb|BG241060.1|BG241060 OV1_37_F11.b1_A002 Ovary 1 (OV1) Sor... 44 0.034
gb|BG464494.1|BG464494 EM1_70_D12.g1_A002 Embryo 1 (EM1) So... 44 0.034
gb|BG464739.1|BG464739 EM1_33_D10.g1_A002 Embryo 1 (EM1) So... 44 0.034
gb|BG556991.1|BG556991 EM1_41_B12.g1_A002 Embryo 1 (EM1) So... 44 0.034
gb|BG355923.2|BG355923 EM1_18_C12.g1_A002 Embryo 1 (EM1) So... 44 0.034
gb|CD223470.1|CD223470 CCC1_28_C04.b1_A007 Callus culture/c... 44 0.034
gb|CD229253.1|CD229253 CCC1_14_B08.b1_A007 Callus culture/c... 44 0.034
gb|CD229336.1|CD229336 CCC1_14_B08.g1_A007 Callus culture/c... 44 0.034
gb|CX613598.1|CX613598 GABR1_9_C10.b1_A002 GA- or brassinol... 44 0.034
gb|BZ422342.1|BZ422342 id52e08.b1 WGS-SbicolorF (DH5a methy... 42 0.14
gb|CL154972.1|CL154972 104_340_10781779_114_31469_259 Sorgh... 42 0.14
gb|CL154973.1|CL154973 104_340_10781779_116_31470_259 Sorgh... 42 0.14
gb|CL184232.1|CL184232 104_397_10898718_114_32361_025 Sorgh... 42 0.14
gb|CW046704.1|CW046704 104_284_10512291_115_30220 Sorghum m... 42 0.14
gb|CW078906.1|CW078906 104_397_10898718_114_32381_025 Sorgh... 42 0.14
gb|CW125825.1|CW125825 104_506_11112548_116_34721_076 Sorgh... 42 0.14
gb|CW200142.1|CW200142 104_625_11183897_116_36861_071 Sorgh... 42 0.14
gb|CW316431.1|CW316431 104_807_11472890_148_35847_001 Sorgh... 42 0.14
gb|BE356723.1|BE356723 DG1_12_G01.b1_A002 Dark Grown 1 (DG1... 42 0.14
gb|CN145701.1|CN145701 WOUND1_34_E01.g1_A002 Wounded leaves... 42 0.14
gb|CX621843.1|CX621843 GABR1_60_B10.g1_A002 GA- or brassino... 42 0.14
>gb|CW059089.1|CW059089 104_301_10519111_114_30160 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519111, DNA
sequence
Length = 687
Score = 729 bits (368), Expect = 0.0
Identities = 529/582 (90%), Gaps = 3/582 (0%)
Strand = Plus / Minus
Query: 491 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacag 550
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 621 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcacccagatcaggacag 562
Query: 551 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggct 610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccgtacgacggcggct 502
Query: 611 gcaacctgggctacttcgtgaacggctacaggtgggtgatccagaacggcgggctcacca 670
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |
Sbjct: 501 gcaacctgggctacttcgtgaacgggtacaagtgggtgatccagaacggcgggctgacga 442
Query: 671 ccgaggccaactacccgtaccaggcgcggcggtacgcgtgcagccgctccagggccgccc 730
| ||||||||||||||||||||||||||||||||| ||||| |||||| | ||||| |
Sbjct: 441 cggaggccaactacccgtaccaggcgcggcggtaccagtgcaaccgctcaaaggccgggc 382
Query: 731 agcacgccgccaccatctccgactacgtgcagctgccggcgggcgagggccagctgcagc 790
||| |||||||| |||||| ||||| |||||||||| ||| |||| ||||||||||
Sbjct: 381 agcgcgccgccaggatctccaactacaggcagctgccgcagggggaggcgcagctgcagc 322
Query: 791 aggcggtggcgcagcagcccgtggccgcggccatcgagatgggcggcagcctgcagttct 850
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcggtggcgcagcagcccgtggcggcggccatcgagatgggcggcagcctgcagttct 262
Query: 851 acagcggcggcgtcttctcggggcagtgcgggaccaggatgaaccacgccatcaccgtcg 910
||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 acagcggcggcgtgtggtcggggcagtgcgggacgcggatgaaccacgccatcaccgtcg 202
Query: 911 tcggctacggcgccgactcctcctcgggcctcaagtactggctcgtcaagaactcgtggg 970
|||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcggctacggcgccga---ctcgtcgggggtcaagtactggctcgtcaagaactcgtggg 145
Query: 971 ggcagagctggggcgagcgcggatacctgcggatgcgccgcgacgtcgggcgcgggggac 1030
| |||| ||||||||||||||| ||||| |||||||| |||||| ||| |||||||
Sbjct: 144 gacagacctggggcgagcgcggctacctaaggatgcgcaaagacgtcaggcaagggggac 85
Query: 1031 tgtgcggcatcgcgctcgacctcgcgtacccggtcgtgtgat 1072
| ||||||||||||||||||||||| |||||| | |||||||
Sbjct: 84 tctgcggcatcgcgctcgacctcgcatacccgattgtgtgat 43
>gb|CW158105.1|CW158105 104_561_11147877_148_36388_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147877, DNA
sequence
Length = 603
Score = 664 bits (335), Expect = 0.0
Identities = 457/497 (91%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 491 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacag 550
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 110 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcacccagatcaggacag 169
Query: 551 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggct 610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 170 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccgtacgacggcggct 229
Query: 611 gcaacctgggctacttcgtgaacggctacaggtgggtgatccagaacggcgggctcacca 670
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |
Sbjct: 230 gcaacctgggctacttcgtgaacgggtacaagtgggtgatccagaacggcgggctgacga 289
Query: 671 ccgaggccaactacccgtaccaggcgcggcggtacgcgtgcagccgctccagggccgccc 730
| ||||||||||||||||||||||||||||||||| ||||| |||||| | ||||| |
Sbjct: 290 cggaggccaactacccgtaccaggcgcggcggtaccagtgcaaccgctcaaaggccgggc 349
Query: 731 agcacgccgccaccatctccgactacgtgcagctgccggcgggcgagggccagctgcagc 790
||| |||||||| |||||| ||||| |||||||||| ||| |||| ||||||||||
Sbjct: 350 agcgcgccgccaggatctccaactacaggcagctgccgcagggggaggcgcagctgcagc 409
Query: 791 aggcggtggcgcagcagcccgtggccgcggccatcgagatgggcggcagcctgcagttct 850
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 aggcggtggcgcagcagcccgtggcggcggccatcgagatgggcggcagcctgcagttct 469
Query: 851 acagcggcggcgtcttctcggggcagtgcgggaccaggatgaaccacgccatcaccgtcg 910
||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 acagcggcggcgtgtggtcggggcagtgcgggacgcggatgaaccacgccatcaccgtcg 529
Query: 911 tcggctacggcgccgactcctcctcgggcctcaagtactggctcgtcaagaactcgtggg 970
|||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 530 tcggctacggcgccga---ctcgtcgggggtcaagtactggctcgtcaagaactcgtggg 586
Query: 971 ggcagagctggggcgag 987
| |||| ||||||||||
Sbjct: 587 gacagacctggggcgag 603
>gb|BG048288.1|BG048288 OV1_16_C10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 586
Score = 482 bits (243), Expect = e-134
Identities = 398/449 (88%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 624 cttcgtgaacggctacaggtgggtgatccagaacggcgggctcaccaccgaggccaacta 683
|||||||||||| |||| |||||||||||||||||||||||| || || ||||||| |||
Sbjct: 1 cttcgtgaacgggtacaagtgggtgatccagaacggcgggctgacgacggaggccaccta 60
Query: 684 cccgtaccaggcgcggcggtacgcgtgcagccgctccagggccgcccagcacgccgccac 743
|||||||||||||||||||||| ||||| |||||| | ||||| |||| ||||||||
Sbjct: 61 cccgtaccaggcgcggcggtaccagtgcaaccgctcaaaggccgggcagcgcgccgccag 120
Query: 744 catctccgactacgtgcagctgccggcgggcgagggccagctgcagcaggcggtggcgca 803
|||||| ||||| |||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 121 gatctccaactacaggcagctgccgcagggggaggcgcagctgcagcaggcggtggcgca 180
Query: 804 gcagcccgtggccgcggccatcgagatgggcggcagcctgcagttctacagcggcggcgt 863
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcagcccgtggcggcggccatcgagatgggcggcagcctgcagttctacagcggcggcgt 240
Query: 864 cttctcggggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggcgc 923
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggtcggggcagtgcgggacgcggatgaaccacgccatcaccgtcgtcggctacggcgc 300
Query: 924 cgactcctcctcgggcctcaagtactggctcgtcaagaactcgtgggggcagagctgggg 983
||| ||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 301 cga---ctcgtcgggggtcaagtactggctcgtcaagaactcgtggggacagacctgggg 357
Query: 984 cgagcgcggatacctgcggatgcgccgcgacgtcgggcgcgggggactgtgcggcatcgc 1043
||||||||| ||||| |||||||| |||||| ||| |||||||| |||||||||||
Sbjct: 358 cgagcgcggctacctaaggatgcgcaaagacgtcaggcaagggggactctgcggcatcgc 417
Query: 1044 gctcgacctcgcgtacccggtcgtgtgat 1072
|||||||||||| |||||| | |||||||
Sbjct: 418 gctcgacctcgcatacccgattgtgtgat 446
>gb|CW059090.1|CW059090 104_301_10519111_115_30164 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519111, DNA
sequence
Length = 615
Score = 416 bits (210), Expect = e-114
Identities = 239/248 (96%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 141 gctgatgatggaccggttcctcagctggcaggcgacgtacaaccggtcgtacccgacggc 200
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctgatgatggaccggttcctccgctggcaggcgacgtacaaccggtcgtacccgacggc 240
Query: 201 ggaggagaggcagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccac 260
||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 241 ggaggagcggcagcggcggttccaggtgtaccggcgcaacatggagcacatcgaggccac 300
Query: 261 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 360
Query: 321 ggaggagttcctggacctgtacaccatgaaggggatg---cccgtccgccgtgacgccgg 377
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 361 ggaggagttcctggacctctacaccatgaaggggatgccccccgtccgccgtgacgccgg 420
Query: 378 caagaagc 385
||||||||
Sbjct: 421 caagaagc 428
Score = 103 bits (52), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 415 gtggacgctccgaccagcgtcgactggaggtccaagggcgccgtcacgccgatcaagaac 474
|||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 452 gtggacgcgcccaccagcgtcgactggaggtccaggggcgccgtcacgcccatcaagaac 511
Query: 475 cagggccc 482
||||||||
Sbjct: 512 cagggccc 519
Score = 69.9 bits (35), Expect = 6e-010
Identities = 67/78 (85%), Gaps = 6/78 (7%)
Strand = Plus / Plus
Query: 9 gatcatggctctcttccgtgccgccgcctcaggagggttc------gcgctgatccttct 62
|||||||||||||| |||||||||||| || |||||||| |||||||||||| |
Sbjct: 34 gatcatggctctctcccgtgccgccgcgtcgagagggttcttcttcgcgctgatccttgt 93
Query: 63 cgcgtgctgcagcctcat 80
||||||||||||||||||
Sbjct: 94 cgcgtgctgcagcctcat 111
>gb|CW444220.1|CW444220 fsbb001f164l08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f164l08, DNA
sequence
Length = 673
Score = 416 bits (210), Expect = e-114
Identities = 239/248 (96%), Gaps = 3/248 (1%)
Strand = Plus / Minus
Query: 141 gctgatgatggaccggttcctcagctggcaggcgacgtacaaccggtcgtacccgacggc 200
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctgatgatggaccggttcctccgctggcaggcgacgtacaaccggtcgtacccgacggc 550
Query: 201 ggaggagaggcagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccac 260
||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 549 ggaggagcggcagcggcggttccaggtgtaccggcgcaacatggagcacatcgaggccac 490
Query: 261 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 430
Query: 321 ggaggagttcctggacctgtacaccatgaaggggatg---cccgtccgccgtgacgccgg 377
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 429 ggaggagttcctggacctctacaccatgaaggggatgccccccgtccgccgtgacgccgg 370
Query: 378 caagaagc 385
||||||||
Sbjct: 369 caagaagc 362
Score = 266 bits (134), Expect = 5e-069
Identities = 146/150 (97%)
Strand = Plus / Minus
Query: 491 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacag 550
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 153 ctagctgctgggcattcgtgacggcggcgacgatcgagagcatcacccagatcaggacag 94
Query: 551 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccctacgacggcggct 610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 93 ggaagctggtgtcgctgtcggagcaggagctgatcgactgcgacccgtacgacggcggct 34
Query: 611 gcaacctgggctacttcgtgaacggctaca 640
||||||||||||||||||||||||| ||||
Sbjct: 33 gcaacctgggctacttcgtgaacgggtaca 4
Score = 103 bits (52), Expect = 4e-020
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 415 gtggacgctccgaccagcgtcgactggaggtccaagggcgccgtcacgccgatcaagaac 474
|||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 338 gtggacgcgcccaccagcgtcgactggaggtccaggggcgccgtcacgcccatcaagaac 279
Query: 475 cagggccc 482
||||||||
Sbjct: 278 cagggccc 271
>gb|BG240519.1|BG240519 OV1_31_A03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 429
Score = 416 bits (210), Expect = e-114
Identities = 239/248 (96%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 141 gctgatgatggaccggttcctcagctggcaggcgacgtacaaccggtcgtacccgacggc 200
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 167 gctgatgatggaccggttcctccgctggcaggcgacgtacaaccggtcgtacccgacggc 226
Query: 201 ggaggagaggcagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccac 260
||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 227 ggaggagcggcagcggcggttccaggtgtaccggcgcaacatggagcacatcgaggccac 286
Query: 261 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 346
Query: 321 ggaggagttcctggacctgtacaccatgaaggggatg---cccgtccgccgtgacgccgg 377
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 347 ggaggagttcctggacctctacaccatgaaggggatgccccccgtccgccgtgacgccgg 406
Query: 378 caagaagc 385
||||||||
Sbjct: 407 caagaagc 414
Score = 69.9 bits (35), Expect = 6e-010
Identities = 67/78 (85%), Gaps = 6/78 (7%)
Strand = Plus / Plus
Query: 9 gatcatggctctcttccgtgccgccgcctcaggagggttc------gcgctgatccttct 62
|||||||||||||| |||||||||||| || |||||||| |||||||||||| |
Sbjct: 20 gatcatggctctctcccgtgccgccgcgtcgagagggttcttcttcgcgctgatccttgt 79
Query: 63 cgcgtgctgcagcctcat 80
||||||||||||||||||
Sbjct: 80 cgcgtgctgcagcctcat 97
>gb|BM317851.1|BM317851 OV1_16_C10.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 400 bits (202), Expect = e-109
Identities = 237/248 (95%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 141 gctgatgatggaccggttcctcagctggcaggcgacgtacaaccggtcgtacccgacggc 200
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 151 gctgatgatggaccggatcctccgctggcaggcgacgtacaaccggtcgtacccgacggc 210
Query: 201 ggaggagaggcagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccac 260
||||||| ||||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 211 ggaggagcggcagcggcggttccaggtgtaccggcgcaacatggagcacatctaggccac 270
Query: 261 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caaccgggcgggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacgga 330
Query: 321 ggaggagttcctggacctgtacaccatgaaggggatg---cccgtccgccgtgacgccgg 377
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 331 ggaggagttcctggacctctacaccatgaaggggatgccccccgtccgccgtgacgccgg 390
Query: 378 caagaagc 385
||||||||
Sbjct: 391 caagaagc 398
Score = 178 bits (90), Expect = 9e-043
Identities = 108/114 (94%)
Strand = Plus / Plus
Query: 415 gtggacgctccgaccagcgtcgactggaggtccaagggcgccgtcacgccgatcaagaac 474
|||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 422 gtggacgcgcccaccagcgtcgactggaggtccaggggcgccgtcacgcccatcaagaac 481
Query: 475 cagggcccgtcgtgctctagctgctgggcattcgtgacggcggcgacgatcgag 528
|||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cagggcccatcctgctctagctgctgggcattcgtgacggcggcgacgatcgag 535
Score = 69.9 bits (35), Expect = 6e-010
Identities = 67/78 (85%), Gaps = 6/78 (7%)
Strand = Plus / Plus
Query: 9 gatcatggctctcttccgtgccgccgcctcaggagggttc------gcgctgatccttct 62
|||||||||||||| |||||||||||| || |||||||| |||||||||||| |
Sbjct: 4 gatcatggctctctcccgtgccgccgcgtcgagagggttcttcttcgcgctgatccttgt 63
Query: 63 cgcgtgctgcagcctcat 80
||||||||||||||||||
Sbjct: 64 cgcgtgctgcagcctcat 81
>gb|BG239941.1|BG239941 OV1_31_A03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 240
Score = 280 bits (141), Expect = 3e-073
Identities = 218/243 (89%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 811 gtggccgcggccatcgagatgggcggcagcctgcagttctacagcggcggcgtcttctcg 870
||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |||
Sbjct: 1 gtggcggcggccatcgagatgggcggcagcgtgcagttctacagcggcggcgtgtggtcg 60
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacggcgccgactcc 930
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 gggcagtgcgggacgcggatgaaccacgccatcaccgtcgtcggctacggcgccga---c 117
Query: 931 tcctcgggcctcaagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgc 990
|| ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 118 tcgtcgggggtcaagtactggctcgtcaagaactcgtggggacagacctggggcgagcgc 177
Query: 991 ggatacctgcggatgcgccgcgacgtcgggcgcgggggactgtgcggcatcgcgctcgac 1050
|| ||||| |||||||| |||||| ||| |||||||| ||||||||||||||||||
Sbjct: 178 ggctacctaaggatgcgcaaagacgtcaggcaagggggactctgcggcatcgcgctcgac 237
Query: 1051 ctc 1053
|||
Sbjct: 238 ctc 240
>gb|BG240636.1|BG240636 OV1_32_D02.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 417
Score = 248 bits (125), Expect = 1e-063
Identities = 205/231 (88%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 842 tgcagttctacagcggcggcgtcttctcggggcagtgcgggaccaggatgaaccacgcca 901
|||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 9 tgcagttctacagcggcggcgtgtggtcggggcagtgcgggacgcggatgaaccacgcca 68
Query: 902 tcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctcgtcaaga 961
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 69 tcaccgtcgtcggctacggcgccgactcgtc---gggggtcaagtactggctcgtcaaga 125
Query: 962 actcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgacgtcgggc 1021
|||||||||| |||| ||||||||||||||| ||||| |||||||| |||||| |||
Sbjct: 126 actcgtggggacagacctggggcgagcgcggctacctaaggatgcgcaaagacgtcaggc 185
Query: 1022 gcgggggactgtgcggcatcgcgctcgacctcgcgtacccggtcgtgtgat 1072
|||||||| ||||||||||||||||||||||| |||||| | |||||||
Sbjct: 186 aagggggactctgcggcatcgcgctcgacctcgcatacccgattgtgtgat 236
>gb|BG933604.1|BG933604 OV1_32_D02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 367
Score = 248 bits (125), Expect = 1e-063
Identities = 205/231 (88%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 842 tgcagttctacagcggcggcgtcttctcggggcagtgcgggaccaggatgaaccacgcca 901
|||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 9 tgcagttctacagcggcggcgtgtggtcggggcagtgcgggacgcggatgaaccacgcca 68
Query: 902 tcaccgtcgtcggctacggcgccgactcctcctcgggcctcaagtactggctcgtcaaga 961
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 69 tcaccgtcgtcggctacggcgccgactcgtc---gggggtcaagtactggctcgtcaaga 125
Query: 962 actcgtgggggcagagctggggcgagcgcggatacctgcggatgcgccgcgacgtcgggc 1021
|||||||||| |||| ||||||||||||||| ||||| |||||||| |||||| |||
Sbjct: 126 actcgtggggacagacctggggcgagcgcggctacctaaggatgcgcaaagacgtcaggc 185
Query: 1022 gcgggggactgtgcggcatcgcgctcgacctcgcgtacccggtcgtgtgat 1072
|||||||| ||||||||||||||||||||||| |||||| | |||||||
Sbjct: 186 aagggggactctgcggcatcgcgctcgacctcgcatacccgattgtgtgat 236
>gb|CW027204.1|CW027204 104_253_10498377_114_30532 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498377, DNA
sequence
Length = 577
Score = 99.6 bits (50), Expect = 7e-019
Identities = 116/138 (84%)
Strand = Plus / Minus
Query: 211 cagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccaccaaccgggcg 270
|||||||||||| ||||||||||||| ||| | ||| ||||||||||||| ||||||
Sbjct: 366 cagcgccggttcgaggtgtaccgccggaacgtggagtacatcgaggccacgaaccggcgc 307
Query: 271 ggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacggaggaggagttc 330
||| ||| ||||| ||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 306 ggcgggctgtcgtaccagctcggcgagaaccagttcaccgacctcacgagagaggagttc 247
Query: 331 ctggacctgtacaccatg 348
|||| | ||||||||||
Sbjct: 246 ctggccgcgtacaccatg 229
>gb|CW263360.1|CW263360 104_731_11230647_116_35213_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230647, DNA
sequence
Length = 732
Score = 87.7 bits (44), Expect = 3e-015
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 211 cagcgccggttccaggtgtaccgccgcaacattgagcacatcgaggccaccaaccgggcg 270
|||||||||||| ||||||||||||| ||| | ||| ||||||||||||| ||||||
Sbjct: 111 cagcgccggttcgaggtgtaccgccggaacgtggagtacatcgaggccacgaaccggcgc 52
Query: 271 ggcaacctgacgtacacgctcggcgagaaccagttcgccgacctcacg 318
||| ||| ||||| ||||||||||||||||||| |||||||||||
Sbjct: 51 ggcgggctgtcgtaccagctcggcgagaaccagttcaccgacctcacg 4
>gb|CL189948.1|CL189948 104_407_10905735_114_32477_054 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905735, DNA
sequence
Length = 728
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 155 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 212
>gb|CL189949.1|CL189949 104_407_10905735_116_32481_054 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905735, DNA
sequence
Length = 721
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 574 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 517
>gb|CW216094.1|CW216094 104_648_11194930_116_37120_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194930, DNA
sequence
Length = 573
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 329 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 272
>gb|CW220225.1|CW220225 104_654_11197238_148_37151_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197238, DNA
sequence
Length = 645
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 356 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 299
>gb|CW230934.1|CW230934 104_680_11210859_148_37339_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210859, DNA
sequence
Length = 669
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 277 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 334
>gb|CW296838.1|CW296838 104_778_11461727_116_35630_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461727, DNA
sequence
Length = 592
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 230 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 173
>gb|CW303448.1|CW303448 104_788_11465244_116_35692_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465244, DNA
sequence
Length = 673
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 97 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 154
>gb|CD224053.1|CD224053 CCC1_31_A07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A07_A007 5', mRNA sequence
Length = 638
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
|||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 579 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagcttgtggactgcgac 636
>gb|CW029241.1|CW029241 104_256_10499562_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499562, DNA
sequence
Length = 846
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 16 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 60
Score = 61.9 bits (31), Expect = 1e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatac 996
|||||||||| || ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 414 caagtactggatcatcaagaactcgtggggggcgagctggggcgacggcggatac 468
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacgg 920
|||| |||||||||||| ||||||||| | |||||||||| ||||||||
Sbjct: 343 gggccgtgcgggaccagcctgaaccacggcgtcaccgtcgtaggctacgg 392
>gb|CW129786.1|CW129786 104_512_11114754_148_34773_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11114754, DNA
sequence
Length = 602
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 183 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 139
>gb|CW241171.1|CW241171 104_700_11218620_148_37541_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218620, DNA
sequence
Length = 638
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 274 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 318
>gb|CW365196.1|CW365196 fsbb001f037j24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037j24, DNA
sequence
Length = 674
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 537 caagatcacgacagggaagctggtgtcgctgtcggagcaggagct 581
|||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 622 caagatcaggaccgggaagctggtgtcgctgtcggagcaggagct 666
>gb|CN129042.1|CN129042 RHOH1_33_D12.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_D12_A002 3', mRNA sequence
Length = 746
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 92 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 136
Score = 61.9 bits (31), Expect = 1e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatac 996
|||||||||| || ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 490 caagtactggatcatcaagaactcgtggggggcgagctggggcgacggcggatac 544
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacgg 920
|||| |||||||||||| ||||||||| | |||||||||| ||||||||
Sbjct: 419 gggccgtgcgggaccagcctgaaccacggcgtcaccgtcgtaggctacgg 468
>gb|CN129126.1|CN129126 RHOH1_33_D12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_D12_A002 5', mRNA sequence
Length = 763
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 682 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 726
>gb|CN129217.1|CN129217 RHOH1_34_D12.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_D12_A002 3', mRNA sequence
Length = 757
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 98 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 142
Score = 61.9 bits (31), Expect = 1e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 942 caagtactggctcgtcaagaactcgtgggggcagagctggggcgagcgcggatac 996
|||||||||| || ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 496 caagtactggatcatcaagaactcgtggggggcgagctggggcgacggcggatac 550
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 871 gggcagtgcgggaccaggatgaaccacgccatcaccgtcgtcggctacgg 920
|||| |||||||||||| ||||||||| | |||||||||| ||||||||
Sbjct: 425 gggccgtgcgggaccagcctgaaccacggcgtcaccgtcgtaggctacgg 474
>gb|CN129305.1|CN129305 RHOH1_34_D12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_D12_A002 5', mRNA sequence
Length = 751
Score = 73.8 bits (37), Expect = 4e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 680 gggaagctggtgtcgctgtcggagcaggagctggtggactgcgac 724
>gb|CW252102.1|CW252102 104_715_11224308_148_35093_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224308, DNA
sequence
Length = 705
Score = 71.9 bits (36), Expect = 2e-010
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 523 atcgagagcatcaccaagatcacgacagggaagctggtgtcgctgtcggagcaggagctg 582
|||||| |||||| | |||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 255 atcgagggcatcaaccagatcaagaacgggaagctggtgtccctgtcggagcaggagctg 196
Query: 583 atcgactgcgac 594
| |||||||||
Sbjct: 195 gtggactgcgac 184
>gb|CW313071.1|CW313071 104_803_11471096_116_35785_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471096, DNA
sequence
Length = 705
Score = 71.9 bits (36), Expect = 2e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 523 atcgagagcatcaccaagatcacgacagggaagctggtgtcgctgtcggagcaggagctg 582
|||||| |||||| | |||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 347 atcgagggcatcaaccagatcaagaacgggaagctggtgtccctgtcggagcaggagctg 406
Query: 583 atcgactgcgac 594
| |||||||||
Sbjct: 407 gtggactgcgac 418
>gb|CW356149.1|CW356149 fsbb001f021b12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f021b12, DNA
sequence
Length = 570
Score = 71.9 bits (36), Expect = 2e-010
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 523 atcgagagcatcaccaagatcacgacagggaagctggtgtcgctgtcggagcaggagctg 582
|||||| |||||| | |||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 67 atcgagggcatcaaccagatcaagaacgggaagctggtgtccctgtcggagcaggagctg 126
Query: 583 atcgactgcgac 594
| |||||||||
Sbjct: 127 gtggactgcgac 138
>gb|CL191862.1|CL191862 104_414_10939844_114_32246_076 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10939844, DNA
sequence
Length = 647
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 417 ctggtgtcgctgtcggagcaggagctgatcgactg 383
>gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500633, DNA
sequence
Length = 834
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 239 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 277
Score = 44.1 bits (22), Expect = 0.034
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 946 tactggctcgtcaagaactcgtgggg 971
|||||| |||||||||||||||||||
Sbjct: 641 tactggatcgtcaagaactcgtgggg 666
>gb|CW165466.1|CW165466 104_573_11152520_116_36471_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152520, DNA
sequence
Length = 558
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 447 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 485
>gb|CW378672.1|CW378672 fsbb001f057i18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057i18, DNA
sequence
Length = 706
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 260 ctggtgtcgctgtcggagcaggagctgatcgactg 294
>gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106l13, DNA
sequence
Length = 612
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 339 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 301
>gb|CW444219.1|CW444219 fsbb001f164l08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f164l08, DNA
sequence
Length = 640
Score = 69.9 bits (35), Expect = 6e-010
Identities = 67/78 (85%), Gaps = 6/78 (7%)
Strand = Plus / Plus
Query: 9 gatcatggctctcttccgtgccgccgcctcaggagggttc------gcgctgatccttct 62
|||||||||||||| |||||||||||| || |||||||| |||||||||||| |
Sbjct: 558 gatcatggctctctcccgtgccgccgcgtcgagagggttcttcttcgcgctgatccttgt 617
Query: 63 cgcgtgctgcagcctcat 80
||||||||||||||||||
Sbjct: 618 cgcgtgctgcagcctcat 635
>gb|CW453444.1|CW453444 fsbb001f197h05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f197h05, DNA
sequence
Length = 417
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 326 ctggtgtcgctgtcggagcaggagctgatcgactg 292
>gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f297k14, DNA
sequence
Length = 742
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 388
>gb|BE125214.1|BE125214 DG1_16_H11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 417 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 455
>gb|BE125370.1|BE125370 DG1_20_A12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 450
Score = 69.9 bits (35), Expect = 6e-010
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1 gatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 55
>gb|BE125550.1|BE125550 DG1_28_A12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 69.9 bits (35), Expect = 6e-010
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1 gatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 55
>gb|BE355591.1|BE355591 DG1_115_B07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 326 ctggtgtcgctgtcggagcaggagctgatcgactg 360
>gb|BE357460.1|BE357460 DG1_20_A12.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 69.9 bits (35), Expect = 6e-010
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 540 gatcacgacagggaagctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||| ||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1 gatcaggaccgggaagctggtgtcgctgtcggagcaggagctcgtggactgcgac 55
>gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 623
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 421 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 459
>gb|BE358197.1|BE358197 DG1_26_C07.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 146 ctggtgtcgctgtcggagcaggagctgatcgactg 180
>gb|BF177182.1|BF177182 EM1_2_G05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 419
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
|||||||||||||||||||||||||||||||||||
Sbjct: 178 ctggtgtcgctgtcggagcaggagctgatcgactg 212
>gb|CD223573.1|CD223573 CCC1_28_C04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_28_C04_A007 5', mRNA sequence
Length = 657
Score = 69.9 bits (35), Expect = 6e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactgcgac 594
||||||||||||||||||||||||||| |||||||||||
Sbjct: 619 ctggtgtcgctgtcggagcaggagctggtcgactgcgac 657
>gb|CD227768.1|CD227768 CCC1_53_G12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_G12_A007 5', mRNA sequence
Length = 629
Score = 69.9 bits (35), Expect = 6e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 556 ctggtgtcgctgtcggagcaggagctgatcgactg 590
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Sbjct: 586 ctggtgtcgctgtcggagcaggagctgatcgactg 620
>gb|CX611431.1|CX611431 ANR1_24_D02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_D02_A002 5', mRNA sequence
Length = 671
Score = 69.9 bits (35), Expect = 6e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 550 gggaagctggtgtcgctgtcggagcaggagctgatcgactgcg 592
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Sbjct: 523 gggaagctggtgtcgctgtcggagcaggagctggtggactgcg 565
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 790,645
Number of Sequences: 832831
Number of extensions: 790645
Number of successful extensions: 184836
Number of sequences better than 0.5: 194
Number of HSP's better than 0.5 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 184158
Number of HSP's gapped (non-prelim): 667
length of query: 1393
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1373
effective length of database: 474,703,049
effective search space: 651767286277
effective search space used: 651767286277
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)