BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204472.2.1
(757 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves... 589 e-166
gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stres... 559 e-157
gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seed... 500 e-139
gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorgh... 470 e-131
gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seed... 448 e-124
gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorgh... 408 e-112
gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seed... 391 e-107
gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2... 377 e-102
gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation... 361 6e-098
gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1... 361 6e-098
gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle ... 361 6e-098
gb|BE356553.1|BE356553 DG1_126_C05.b1_A002 Dark Grown 1 (DG... 359 2e-097
gb|BI075904.1|BI075904 IP1_22_G09.b1_A002 Immature pannicle... 353 1e-095
gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorgh... 291 5e-077
gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1... 291 5e-077
gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1... 291 5e-077
gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2... 291 5e-077
gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2... 291 5e-077
gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/c... 291 5e-077
gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum m... 287 7e-076
gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG... 287 7e-076
gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 ... 287 7e-076
gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves... 272 4e-071
gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorgh... 264 1e-068
gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation... 264 1e-068
gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (L... 264 1e-068
gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG... 264 1e-068
gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2... 264 1e-068
gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedl... 264 1e-068
gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seed... 264 1e-068
gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seed... 264 1e-068
gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seed... 264 1e-068
gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkal... 264 1e-068
gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves... 264 1e-068
gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves... 264 1e-068
gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassino... 264 1e-068
gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassino... 264 1e-068
gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassino... 262 4e-068
gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (... 256 3e-066
gb|BI211382.1|BI211382 IP1_60_A09.b1_A002 Immature pannicle... 256 3e-066
gb|CL157537.1|CL157537 104_345_10783651_116_31478_211 Sorgh... 250 2e-064
gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG... 246 3e-063
gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-defic... 246 3e-063
gb|BE363097.1|BE363097 DG1_9_H02.b1_A002 Dark Grown 1 (DG1)... 244 1e-062
gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/c... 244 1e-062
gb|BE357579.1|BE357579 DG1_21_E10.b1_A002 Dark Grown 1 (DG1... 226 2e-057
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 224 9e-057
gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (L... 218 6e-055
gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (L... 218 6e-055
gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (L... 218 6e-055
gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (L... 218 6e-055
gb|BE356684.1|BE356684 DG1_12_C08.b1_A002 Dark Grown 1 (DG1... 218 6e-055
gb|BE354986.1|BE354986 DG1_10_F05.b1_A002 Dark Grown 1 (DG1... 214 9e-054
gb|BE355421.1|BE355421 DG1_114_G02.b2_A002 Dark Grown 1 (DG... 214 9e-054
gb|BE356455.1|BE356455 DG1_125_D07.b1_A002 Dark Grown 1 (DG... 214 9e-054
gb|BG559301.1|BG559301 RHIZ2_53_B08.b1_A003 Rhizome2 (RHIZ2... 214 9e-054
gb|BE367582.1|BE367582 PI1_9_H05.b1_A002 Pathogen induced 1... 210 1e-052
gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2... 204 9e-051
gb|BE362201.1|BE362201 DG1_85_C05.b1_A002 Dark Grown 1 (DG1... 198 5e-049
gb|BG050303.1|BG050303 FM1_53_C07.b1_A003 Floral-Induced Me... 184 8e-045
gb|BE367581.1|BE367581 PI1_9_H06.b1_A002 Pathogen induced 1... 161 1e-037
gb|BG649723.1|BG649723 RHIZ2_82_G10.b1_A003 Rhizome2 (RHIZ2... 145 7e-033
gb|BF704669.1|BF704669 FM1_50_A06.b1_A003 Floral-Induced Me... 135 7e-030
gb|BG558372.1|BG558372 RHIZ2_66_E05.b1_A003 Rhizome2 (RHIZ2... 127 2e-027
gb|BG053306.1|BG053306 RHIZ2_25_G10.b1_A003 Rhizome2 (RHIZ2... 125 6e-027
gb|BE125160.1|BE125160 DG1_13_H08.b1_A002 Dark Grown 1 (DG1... 121 1e-025
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 119 4e-025
gb|CL164386.1|CL164386 104_358_10807871_116_31815_239 Sorgh... 115 6e-024
gb|CL177479.1|CL177479 104_384_10893857_116_31916_305 Sorgh... 109 4e-022
gb|CW044997.1|CW044997 104_281_10509293_114_30236 Sorghum m... 109 4e-022
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 109 4e-022
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 105 6e-021
gb|CW236276.1|CW236276 104_692_11215531_116_37501_078 Sorgh... 103 2e-020
gb|BG558405.1|BG558405 RHIZ2_67_A09.b1_A003 Rhizome2 (RHIZ2... 103 2e-020
gb|CN125727.1|CN125727 RHOH1_12_H07.g1_A002 Acid- and alkal... 103 2e-020
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 101 9e-020
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 98 1e-018
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 98 1e-018
gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sor... 98 1e-018
gb|BE362052.1|BE362052 DG1_84_F03.b1_A002 Dark Grown 1 (DG1... 96 6e-018
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 96 6e-018
gb|CD235748.1|CD235748 SS1_37_G03.g1_A012 Salt-stressed see... 96 6e-018
gb|CD235780.1|CD235780 SS1_37_G02.g1_A012 Salt-stressed see... 96 6e-018
gb|CW045087.1|CW045087 104_281_10509350_114_30237 Sorghum m... 92 9e-017
gb|CW175933.1|CW175933 104_588_11158217_116_36578_069 Sorgh... 92 9e-017
gb|CW221899.1|CW221899 104_657_11202092_116_37451_078 Sorgh... 92 9e-017
gb|CW375801.1|CW375801 fsbb001f053f12f0 Sorghum methylation... 92 9e-017
gb|CW493542.1|CW493542 fsbb001f284f17k0 Sorghum methylation... 92 9e-017
gb|BE357377.1|BE357377 DG1_15_B01.b2_A002 Dark Grown 1 (DG1... 92 9e-017
gb|BG487539.1|BG487539 EM1_67_C06.b1_A002 Embryo 1 (EM1) So... 92 9e-017
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 90 3e-016
gb|CD429366.1|CD429366 ETH1_4_E12.b1_A002 Ethylene-treated ... 90 3e-016
gb|CL154551.1|CL154551 104_339_10781491_116_31372_355 Sorgh... 88 1e-015
gb|CW032387.1|CW032387 104_261_10501349_114_30363 Sorghum m... 88 1e-015
gb|CW171233.1|CW171233 104_581_11155631_116_36521_082 Sorgh... 88 1e-015
gb|CW183379.1|CW183379 104_599_11164586_148_36677_011 Sorgh... 88 1e-015
gb|CW360230.1|CW360230 fsbb001f028d16f0 Sorghum methylation... 88 1e-015
gb|CW465154.1|CW465154 fsbb001f215m11f0 Sorghum methylation... 88 1e-015
gb|BE125649.1|BE125649 DG1_54_F10.b1_A002 Dark Grown 1 (DG1... 86 5e-015
gb|CW370183.1|CW370183 fsbb001f044p12k0 Sorghum methylation... 84 2e-014
gb|CW396733.1|CW396733 fsbb001f085f03f0 Sorghum methylation... 84 2e-014
gb|BZ333054.1|BZ333054 hx32e04.b1 WGS-SbicolorF (JM107 adap... 82 8e-014
gb|CW117366.1|CW117366 104_493_11107618_148_34613_041 Sorgh... 82 8e-014
gb|CW173021.1|CW173021 104_584_11156617_148_36546_007 Sorgh... 82 8e-014
gb|CW393419.1|CW393419 fsbb001f080h11k0 Sorghum methylation... 82 8e-014
gb|CD429502.1|CD429502 ETH1_4_E12.g1_A002 Ethylene-treated ... 82 8e-014
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 80 3e-013
gb|CW489176.1|CW489176 fsbb001f265p08f0 Sorghum methylation... 80 3e-013
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 80 3e-013
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 80 3e-013
gb|CL183147.1|CL183147 104_395_10897985_116_31918_209 Sorgh... 78 1e-012
gb|CW128842.1|CW128842 104_510_11114239_116_34758_022 Sorgh... 78 1e-012
gb|CW497689.1|CW497689 fsbb001f290j02k0 Sorghum methylation... 78 1e-012
gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1... 78 1e-012
gb|BF586634.1|BF586634 FM1_29_F11.b1_A003 Floral-Induced Me... 78 1e-012
gb|BG102401.1|BG102401 RHIZ2_23_C06.b1_A003 Rhizome2 (RHIZ2... 78 1e-012
gb|BI075202.1|BI075202 IP1_17_D05.b1_A002 Immature pannicle... 78 1e-012
gb|CD208462.1|CD208462 HS1_37_A05.g1_A012 Heat-shocked seed... 78 1e-012
gb|CD211845.1|CD211845 HS1_64_C08.g1_A012 Heat-shocked seed... 78 1e-012
gb|CD213004.1|CD213004 HS1_17_C02.g1_A012 Heat-shocked seed... 78 1e-012
gb|CD224210.1|CD224210 CCC1_32_E03.g1_A007 Callus culture/c... 78 1e-012
gb|CD225014.1|CD225014 CCC1_37_D01.g1_A007 Callus culture/c... 78 1e-012
gb|CD229214.1|CD229214 CCC1_13_B02.g1_A007 Callus culture/c... 78 1e-012
gb|CF427438.1|CF427438 PH1_1_H06.g1_A002 Phosphorous-defici... 78 1e-012
gb|CF433664.1|CF433664 NIT1_28_D06.g1_A002 Nitrogen-deficie... 78 1e-012
gb|CN136100.1|CN136100 OX1_40_F12.g1_A002 Oxidatively-stres... 78 1e-012
gb|BZ780402.1|BZ780402 ii39f06.g1 WGS-SbicolorF (DH5a methy... 74 2e-011
gb|CW165329.1|CW165329 104_573_11152448_116_36469_022 Sorgh... 74 2e-011
gb|CW392542.1|CW392542 fsbb001f079d12f0 Sorghum methylation... 74 2e-011
gb|BF422186.1|BF422186 FM1_12_H05.b1_A003 Floral-Induced Me... 74 2e-011
gb|CL171166.1|CL171166 104_372_10889229_116_31779_285 Sorgh... 72 8e-011
gb|CL171167.1|CL171167 104_372_10889229_148_31778_285 Sorgh... 72 8e-011
gb|CL183819.1|CL183819 104_396_10898428_114_31923_268 Sorgh... 72 8e-011
gb|CW178657.1|CW178657 104_592_11159684_116_36620_072 Sorgh... 72 8e-011
gb|CW183688.1|CW183688 104_599_11164747_148_36676_070 Sorgh... 72 8e-011
gb|CW215159.1|CW215159 104_647_11194395_116_37165_010 Sorgh... 72 8e-011
gb|CW369263.1|CW369263 fsbb001f043j14f0 Sorghum methylation... 72 8e-011
gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation... 72 8e-011
gb|CW417037.1|CW417037 fsbb001f117n19f0 Sorghum methylation... 72 8e-011
gb|BE597408.1|BE597408 PI1_69_B10.b1_A002 Pathogen induced ... 72 8e-011
gb|BF481712.1|BF481712 FM1_21_D12.b1_A003 Floral-Induced Me... 72 8e-011
gb|CN136666.1|CN136666 OX1_44_D01.g1_A002 Oxidatively-stres... 72 8e-011
gb|CN141940.1|CN141940 WOUND1_2_G05.g1_A002 Wounded leaves ... 72 8e-011
gb|CW053111.1|CW053111 104_293_10515781_114_30184 Sorghum m... 70 3e-010
gb|CW253378.1|CW253378 104_717_11225053_116_35110_063 Sorgh... 70 3e-010
gb|CW281372.1|CW281372 104_757_11408141_116_35463_031 Sorgh... 70 3e-010
gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Me... 70 3e-010
gb|CD204106.1|CD204106 HS1_3_A03.g1_A012 Heat-shocked seedl... 70 3e-010
gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/c... 70 3e-010
gb|CW163521.1|CW163521 104_571_11151505_148_36454_011 Sorgh... 68 1e-009
gb|CW173339.1|CW173339 104_585_11156788_148_36551_016 Sorgh... 68 1e-009
gb|CW175934.1|CW175934 104_588_11158217_148_36579_069 Sorgh... 68 1e-009
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 68 1e-009
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 68 1e-009
gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1... 68 1e-009
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 68 1e-009
gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-defic... 68 1e-009
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 68 1e-009
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 68 1e-009
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 68 1e-009
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 68 1e-009
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 68 1e-009
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 68 1e-009
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 68 1e-009
gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassino... 68 1e-009
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 66 5e-009
gb|CL165468.1|CL165468 104_360_10808639_114_31818_239 Sorgh... 66 5e-009
gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorgh... 66 5e-009
gb|CW138453.1|CW138453 104_528_11134704_116_34891_094 Sorgh... 66 5e-009
gb|CW207390.1|CW207390 104_636_11188111_148_36969_024 Sorgh... 66 5e-009
gb|CW262595.1|CW262595 104_730_11230163_116_35225_044 Sorgh... 66 5e-009
gb|CW262596.1|CW262596 104_730_11230163_148_35221_044 Sorgh... 66 5e-009
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 66 5e-009
gb|CW360174.1|CW360174 fsbb001f028c08k0 Sorghum methylation... 66 5e-009
gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation... 66 5e-009
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 66 5e-009
gb|AW922665.1|AW922665 DG1_45_C01.b1_A002 Dark Grown 1 (DG1... 66 5e-009
gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1... 66 5e-009
gb|AW923588.1|AW923588 DG1_56_H08.b1_A002 Dark Grown 1 (DG1... 66 5e-009
gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1... 66 5e-009
gb|BF656221.1|BF656221 FM1_44_E06.b1_A003 Floral-Induced Me... 66 5e-009
gb|CD227647.1|CD227647 CCC1_52_D04.g1_A007 Callus culture/c... 66 5e-009
gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated... 66 5e-009
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 66 5e-009
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 66 5e-009
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 66 5e-009
gb|BZ779790.1|BZ779790 ii34f04.b1 WGS-SbicolorF (DH5a methy... 64 2e-008
gb|CW110080.1|CW110080 104_482_11103487_148_34515_022 Sorgh... 64 2e-008
gb|CW229300.1|CW229300 104_670_11207230_148_37261_087 Sorgh... 64 2e-008
gb|CW439907.1|CW439907 fsbb001f158e17f0 Sorghum methylation... 64 2e-008
gb|CW469002.1|CW469002 fsbb001f221h22f0 Sorghum methylation... 64 2e-008
gb|BE918783.1|BE918783 OV1_4_H11.b1_A002 Ovary 1 (OV1) Sorg... 64 2e-008
gb|CW057560.1|CW057560 104_299_10518287_115_30171 Sorghum m... 62 8e-008
gb|CW086745.1|CW086745 104_430_10947179_116_32570_034 Sorgh... 62 8e-008
gb|CW279650.1|CW279650 104_754_11407191_116_35435_056 Sorgh... 62 8e-008
gb|CW279651.1|CW279651 104_754_11407191_148_35439_056 Sorgh... 62 8e-008
gb|CW404597.1|CW404597 fsbb001f096m21k0 Sorghum methylation... 62 8e-008
gb|CW486084.1|CW486084 fsbb001f249c15k0 Sorghum methylation... 62 8e-008
gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1... 62 8e-008
gb|CF480594.1|CF480594 POL1_66_E08.g1_A002 Pollen Sorghum b... 62 8e-008
gb|CL154550.1|CL154550 104_339_10781491_114_31371_355 Sorgh... 60 3e-007
gb|CW075171.1|CW075171 104_355_10806807_114_31832_327 Sorgh... 60 3e-007
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 60 3e-007
gb|CD231870.1|CD231870 SS1_30_G08.g1_A012 Salt-stressed see... 60 3e-007
gb|CD236653.1|CD236653 SS1_35_H04.g1_A012 Salt-stressed see... 60 3e-007
gb|CD463605.1|CD463605 ETH1_45_D02.g1_A002 Ethylene-treated... 60 3e-007
gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves... 60 3e-007
gb|CL165204.1|CL165204 104_360_10808428_116_31819_028 Sorgh... 58 1e-006
gb|CW022913.1|CW022913 104_162_10432131_1_30008 Sorghum met... 58 1e-006
gb|CW105399.1|CW105399 104_474_11012877_116_34452_085 Sorgh... 58 1e-006
gb|CW169284.1|CW169284 104_579_11154593_116_36499_075 Sorgh... 58 1e-006
gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorgh... 58 1e-006
gb|CW030005.1|CW030005 104_257_10499999_116_30402 Sorghum m... 56 5e-006
gb|CW143823.1|CW143823 104_535_11137619_116_34954_036 Sorgh... 56 5e-006
gb|CW143824.1|CW143824 104_535_11137619_148_34958_036 Sorgh... 56 5e-006
gb|CW205284.1|CW205284 104_633_11186988_148_36927_038 Sorgh... 56 5e-006
gb|BE362164.1|BE362164 DG1_84_F03.g1_A002 Dark Grown 1 (DG1... 56 5e-006
gb|CW411916.1|CW411916 fsbb001f107e19k0 Sorghum methylation... 54 2e-005
gb|CW448024.1|CW448024 fsbb001f181g24k0 Sorghum methylation... 54 2e-005
gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (L... 54 2e-005
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|BG947867.1|BG947867 IP1_6_C10.b1_A002 Immature pannicle ... 54 2e-005
gb|CW034966.1|CW034966 104_265_10502869_114_30378 Sorghum m... 52 8e-005
gb|CW055609.1|CW055609 104_297_10517224_115_30173 Sorghum m... 52 8e-005
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 52 8e-005
gb|CW253379.1|CW253379 104_717_11225053_148_35106_063 Sorgh... 52 8e-005
gb|CW281373.1|CW281373 104_757_11408141_148_35459_031 Sorgh... 52 8e-005
gb|CW107151.1|CW107151 104_477_11096411_148_34470_044 Sorgh... 50 3e-004
gb|CW382993.1|CW382993 fsbb001f065e16f0 Sorghum methylation... 50 3e-004
gb|AW922698.1|AW922698 DG1_45_E11.b1_A002 Dark Grown 1 (DG1... 50 3e-004
gb|BI140973.1|BI140973 IP1_41_F02.b1_A002 Immature pannicle... 50 3e-004
gb|BF422100.1|BF422100 FM1_12_H05.g1_A003 Floral-Induced Me... 48 0.001
gb|CW102735.1|CW102735 104_471_11011503_116_34426_062 Sorgh... 46 0.005
gb|CW215160.1|CW215160 104_647_11194395_148_37166_010 Sorgh... 46 0.005
gb|CW266820.1|CW266820 104_736_11232639_148_35285_052 Sorgh... 46 0.005
gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorgh... 46 0.005
gb|CW305737.1|CW305737 104_791_11466467_148_36273_046 Sorgh... 46 0.005
gb|CW307219.1|CW307219 104_795_11468026_116_36059_043 Sorgh... 46 0.005
gb|CW307220.1|CW307220 104_795_11468026_148_36060_043 Sorgh... 46 0.005
gb|CW417038.1|CW417038 fsbb001f117n19k0 Sorghum methylation... 46 0.005
gb|CW442061.1|CW442061 fsbb001f161i13f0 Sorghum methylation... 46 0.005
gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation... 46 0.005
gb|CW459733.1|CW459733 fsbb001f206j20k0 Sorghum methylation... 46 0.005
gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2... 46 0.005
gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) So... 46 0.005
gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2... 46 0.005
gb|CD229132.1|CD229132 CCC1_13_B02.b1_A007 Callus culture/c... 46 0.005
gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficien... 46 0.005
gb|CF433608.1|CF433608 NIT1_28_D06.b1_A002 Nitrogen-deficie... 46 0.005
gb|CN136014.1|CN136014 OX1_40_F12.b1_A002 Oxidatively-stres... 46 0.005
gb|CN150879.1|CN150879 WOUND1_72_B09.b1_A002 Wounded leaves... 46 0.005
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 46 0.005
gb|CL176800.1|CL176800 104_383_10893372_116_31773_204 Sorgh... 44 0.018
gb|CW219058.1|CW219058 104_652_11196517_116_37460_049 Sorgh... 44 0.018
gb|CW426513.1|CW426513 fsbb001f137p03f0 Sorghum methylation... 44 0.018
gb|CW469003.1|CW469003 fsbb001f221h22k0 Sorghum methylation... 44 0.018
gb|BE355801.1|BE355801 DG1_11_E05.b1_A002 Dark Grown 1 (DG1... 44 0.018
gb|BG047807.1|BG047807 OV1_28_A10.b1_A002 Ovary 1 (OV1) Sor... 44 0.018
gb|BG560213.1|BG560213 RHIZ2_73_A07.b1_A003 Rhizome2 (RHIZ2... 44 0.018
gb|CF481541.1|CF481541 POL1_72_C10.g1_A002 Pollen Sorghum b... 44 0.018
gb|CF484528.1|CF484528 POL1_25_H02.g1_A002 Pollen Sorghum b... 44 0.018
gb|CF489818.1|CF489818 POL1_59_G01.g1_A002 Pollen Sorghum b... 44 0.018
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 44 0.018
gb|CW142382.1|CW142382 104_533_11136827_116_34936_036 Sorgh... 42 0.073
gb|CW166039.1|CW166039 104_574_11152832_116_36481_022 Sorgh... 42 0.073
gb|CW201321.1|CW201321 104_627_11184511_116_37109_030 Sorgh... 42 0.073
gb|CW201322.1|CW201322 104_627_11184511_148_37110_030 Sorgh... 42 0.073
gb|CW289114.1|CW289114 104_767_11412305_116_35541_065 Sorgh... 42 0.073
gb|CW325952.1|CW325952 104_821_11477963_116_36062_046 Sorgh... 42 0.073
gb|CW375985.1|CW375985 fsbb001f053k02f0 Sorghum methylation... 42 0.073
gb|CW497688.1|CW497688 fsbb001f290j02f0 Sorghum methylation... 42 0.073
gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1... 42 0.073
gb|BG101722.1|BG101722 EM1_5_E02.b1_A002 Embryo 1 (EM1) Sor... 42 0.073
gb|BG463230.1|BG463230 EM1_48_A10.b1_A002 Embryo 1 (EM1) So... 42 0.073
gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (L... 42 0.073
gb|CD431245.1|CD431245 ETH1_7_G12.g1_A002 Ethylene-treated ... 42 0.073
gb|CF429532.1|CF429532 PH1_22_C12.g1_A002 Phosphorous-defic... 42 0.073
gb|CW021182.1|CW021182 104_109_10409396_114_30490 Sorghum m... 40 0.29
gb|CW037357.1|CW037357 104_269_10504294_114_30383 Sorghum m... 40 0.29
gb|CW098307.1|CW098307 104_464_11002934_148_34367_051 Sorgh... 40 0.29
gb|CW236654.1|CW236654 104_692_11215731_148_37496_004 Sorgh... 40 0.29
gb|CW275098.1|CW275098 104_748_11404780_148_35385_012 Sorgh... 40 0.29
gb|CW323273.1|CW323273 104_817_11476543_148_35960_026 Sorgh... 40 0.29
gb|CW360173.1|CW360173 fsbb001f028c08f0 Sorghum methylation... 40 0.29
gb|CW391503.1|CW391503 fsbb001f077k17k0 Sorghum methylation... 40 0.29
gb|CW396734.1|CW396734 fsbb001f085f03k0 Sorghum methylation... 40 0.29
gb|BF586913.1|BF586913 FM1_31_A07.b1_A003 Floral-Induced Me... 40 0.29
gb|BI076157.1|BI076157 IP1_26_C10.b1_A002 Immature pannicle... 40 0.29
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 40 0.29
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 40 0.29
gb|CX615168.1|CX615168 GABR1_18_C05.g1_A002 GA- or brassino... 40 0.29
>gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_H04_A002 5', mRNA sequence
Length = 793
Score = 589 bits (297), Expect = e-166
Identities = 454/507 (89%), Gaps = 1/507 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| ||| ||||||||||||| ||||| ||||| ||||||| |
Sbjct: 765 tcgcccagtcgtcggcgttccacaggctggagtagagccgcatcggctggttcttgggga 706
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
|||| ||| |||||||||||||||| | |||||||||||| |||| |||||||||||||
Sbjct: 705 acgccacccccttgctctccaggttccggaagtccctgatcggcatctcgtccaccatga 646
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
||||||||||||||||||||||||||||||||||||| |||||||| |||||| || |
Sbjct: 645 agatgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaa 586
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||||
Sbjct: 585 accagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtgca 526
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 525 gcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcatcgtggatgt 466
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 465 tgccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagct 406
Query: 408 gcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgg 467
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 405 tcagctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaacccggacccgg 346
Query: 468 acgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgt 527
| || |||||||||| ||||||||||||| |||||||||| ||| |||||| || ||||
Sbjct: 345 aggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgccacgaccgt 286
Query: 528 cgccccacgtgatgtccagctcctggt 554
|||||||||||||||| | ||||||||
Sbjct: 285 cgccccacgtgatgtcgaactcctggt 259
>gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_22_E01_A002 5', mRNA sequence
Length = 705
Score = 559 bits (282), Expect = e-157
Identities = 452/508 (88%), Gaps = 2/508 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| ||| ||||||||||||| ||||| ||||| ||||||| |
Sbjct: 626 tcgcccagtcgtcggcgttccacaggctggagtagagccgcatcggctggttcttgggga 567
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
|||| ||| |||||||||||||||| | |||||||||||| |||| |||||||||||||
Sbjct: 566 acgccacccccttgctctccaggttccggaagtccctgatcggcatctcgtccaccatga 507
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
||||||||||||||||||||||||||||||||||||| |||||||| |||||| || |
Sbjct: 506 agatgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaa 447
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||| ||
Sbjct: 446 accagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtaca 387
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgc 347
||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||| | |
Sbjct: 386 gcgtgtagggctcgccggagacgttgccgaggaacttgaagtcgatctcatcgtgggtgt 327
Query: 348 cgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagcc 407
||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||
Sbjct: 326 tgccctgcgacgacaggttgtaggcggtgacggtgccggccgagttgccggggaccagct 267
Query: 408 gcagctgcatgtcgatcttgccga-acaggtactcgtgccgggactggaacccggagccg 466
||||||||||||||||||||||| | ||||||||||||| ||||||||||||||| |||
Sbjct: 266 tcagctgcatgtcgatcttgccgacagaggtactcgtgcctggactggaacccggacccg 207
Query: 467 gacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccg 526
|| || |||||||||| ||||||||||||| |||||||||| ||| |||||| || |||
Sbjct: 206 gaggtccggtccagcgtcagcgtcagcagctgcccgttgtcgtggatcttgccacgaccg 147
Query: 527 tcgccccacgtgatgtccagctcctggt 554
||||||||||||||||| | ||||||||
Sbjct: 146 tcgccccacgtgatgtcgaactcctggt 119
>gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_41_D06_A012 5', mRNA sequence
Length = 685
Score = 500 bits (252), Expect = e-139
Identities = 377/419 (89%)
Strand = Plus / Minus
Query: 136 gaagtccctgatgngcatgtcgtccaccatgaagatgacgtgcttggggttccagaggat 195
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaagtccctgatcggcatctcgtccaccatgaagatgacgtgcttggggttccagaggat 622
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
||||||||| |||||||| |||||| || ||||||||||||||||||||||||| |||
Sbjct: 621 ggagtaggtatggaagtccttggtgggatcaaaccagaggcggaactgctgctccctctg 562
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 tccctggccctgggtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgcc 502
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||
Sbjct: 501 gaggaactcgaagtcgatctcatcgtgggtgttgccctgcgacgacaggtagtaggcggt 442
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
|||||||||||| |||||||| || |||||| |||||||||||||||||||||||| ||
Sbjct: 441 gacggtgccggccgagttgccggggaccagcttcagctgcatgtcgatcttgccgaagag 382
Query: 436 gtactcgtgccgggactggaacccggagccggacgtgcggtccagcgacagcgtcagcag 495
||||||||||| |||||||||||| || ||||| || |||||||||| ||||||||||||
Sbjct: 381 gtactcgtgcctggactggaaccccgacccggaggtccggtccagcgtcagcgtcagcag 322
Query: 496 ccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
| |||||||||| ||| |||| | || |||||||||||||||||||| | ||||||||
Sbjct: 321 ctgcccgttgtcctggatcttgacacgaccgtcgccccacgtgatgtcgaactcctggt 263
>gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943679, DNA
sequence
Length = 636
Score = 470 bits (237), Expect = e-131
Identities = 348/385 (90%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
||||||||||||||||||||||||||||||||||| |||||||| |||||| || |||
Sbjct: 485 atgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaaac 426
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||||||
Sbjct: 425 cagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtgcagc 366
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
||||||||||||||||| |||||||| |||||||||||||||||||| ||||| | | |
Sbjct: 365 gtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcatcgtgggtgttg 306
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |
Sbjct: 305 ccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagcttc 246
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccggac 469
||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 245 agctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaacccggacccggag 186
Query: 470 gtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcg 529
|| |||||||||| ||||||||||||| |||||||||| ||| |||||| || ||||||
Sbjct: 185 gtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgccacgaccgtcg 126
Query: 530 ccccacgtgatgtccagctcctggt 554
|||||||||||||| | ||||||||
Sbjct: 125 ccccacgtgatgtcgaactcctggt 101
>gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_D02_A012 5', mRNA sequence
Length = 648
Score = 448 bits (226), Expect = e-124
Identities = 346/386 (89%)
Strand = Plus / Minus
Query: 169 gatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaa 228
|||||||||||||||||||||||||||||||||||| |||||||| |||||| || ||
Sbjct: 648 gatgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaaa 589
Query: 229 ccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcag 288
||||||||||||||||||||||| ||| ||||| ||| | ||||||||||||||||||||
Sbjct: 588 ccagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtgcag 529
Query: 289 cgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgcc 348
|||||||||||||||||| |||||||| |||||||||||||||||||| ||||| | |
Sbjct: 528 cgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcatcgtgggtgtt 469
Query: 349 gccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccg 408
|| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 468 gctctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagctt 409
Query: 409 cagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||||| ||||||||||||| |||||||||||| || |||||
Sbjct: 408 cagctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaaccccgacccgga 349
Query: 469 cgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtc 528
|| |||||||||| ||||||||||||| |||||||||| ||| |||| | || |||||
Sbjct: 348 ggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgacacgaccgtc 289
Query: 529 gccccacgtgatgtccagctcctggt 554
||||||||||||||| | ||||||||
Sbjct: 288 gccccacgtgatgtcgaactcctggt 263
>gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465956, DNA
sequence
Length = 622
Score = 408 bits (206), Expect = e-112
Identities = 305/338 (90%)
Strand = Plus / Plus
Query: 217 ggtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacac 276
|||||| || ||||||||||||||||||||||||| ||| ||||| ||| | ||||||||
Sbjct: 7 ggtgggatcaaaccagaggcggaactgctgctccctctgtccctggccctgggtgaacac 66
Query: 277 gttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctc 336
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 67 gttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctc 126
Query: 337 gtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcc 396
||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 127 atcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgcc 186
Query: 397 cggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaa 456
|| |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 187 ggggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaa 246
Query: 457 cccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggacctt 516
|||||| ||||| || |||||||||| ||||||||||||| |||||||||| ||| |||
Sbjct: 247 cccggacccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatctt 306
Query: 517 gccccgcccgtcgccccacgtgatgtccagctcctggt 554
||| || |||||||||||||||||||| | ||||||||
Sbjct: 307 gccacgaccgtcgccccacgtgatgtcgaactcctggt 344
>gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_B07_A012 5', mRNA sequence
Length = 599
Score = 391 bits (197), Expect = e-107
Identities = 302/337 (89%)
Strand = Plus / Minus
Query: 218 gtggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacg 277
||||| || ||||||||||||||||||||||||| ||| ||||| ||| | |||||||||
Sbjct: 599 gtgggatcaaaccagaggcggaactgctgctccctctgtccctggccctgggtgaacacg 540
Query: 278 ttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcg 337
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 539 ttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctca 480
Query: 338 tcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgccc 397
||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 479 tcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccg 420
Query: 398 ggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaac 457
|| |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 419 gggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaac 360
Query: 458 ccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttg 517
|| || ||||| || |||||||||| ||||||||||||| |||||||||| ||| ||||
Sbjct: 359 cccgacccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttg 300
Query: 518 ccccgcccgtcgccccacgtgatgtccagctcctggt 554
| || |||||||||||||||||||| | ||||||||
Sbjct: 299 acacgaccgtcgccccacgtgatgtcgaactcctggt 263
>gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 377 bits (190), Expect = e-102
Identities = 262/286 (91%)
Strand = Plus / Minus
Query: 269 gtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaag 328
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 534 gtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaag 475
Query: 329 tcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcgatctcgtcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccggcc 415
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || |||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 414 gagttgccggggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctg 355
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
|||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||
Sbjct: 354 gactggaacccggagccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcc 295
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
||| |||||| || |||||||||||||||||||| | ||||||||
Sbjct: 294 tggatcttgccacgaccgtcgccccacgtgatgtcgaactcctggt 249
>gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f104p18, DNA
sequence
Length = 454
Score = 361 bits (182), Expect = 6e-098
Identities = 260/286 (90%)
Strand = Plus / Minus
Query: 170 atgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaac 229
||||||||||||||||||||||||||||||||||| |||||||| |||||| || |||
Sbjct: 286 atgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaaac 227
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||||||
Sbjct: 226 cagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtgcagc 167
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
||||||||||||||||| |||||||| |||||||||||||||||||| ||||| | | |
Sbjct: 166 gtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcatcgtgggtgttg 107
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |
Sbjct: 106 ccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagcttc 47
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactgga 455
||||||||||||||||| ||||| ||||||||||||| ||||||||
Sbjct: 46 agctgcatgtcgatctttccgaagaggtactcgtgcctggactgga 1
Score = 61.9 bits (31), Expect = 8e-008
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 121 gctctccaggttgcngaagtccctgatgngcatgtcgtccaccatgaag 169
|||||||||||| | |||||||||||| |||| |||||||||||||||
Sbjct: 454 gctctccaggttccggaagtccctgatcggcatctcgtccaccatgaag 406
>gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 361 bits (182), Expect = 6e-098
Identities = 260/286 (90%)
Strand = Plus / Minus
Query: 269 gtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaag 328
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 543 gtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaag 484
Query: 329 tcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
|||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcgatctcatcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccggcc 424
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || |||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 423 gagttgccggggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctg 364
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
|||||||||||||| ||||| || |||||||||| ||||||||||||| ||||||||||
Sbjct: 363 gactggaacccggacccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcc 304
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
||| |||||| || |||||||||||||||||||| | ||||||||
Sbjct: 303 tggatcttgccacgaccgtcgccccacgtgatgtcgaactcctggt 258
>gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 544
Score = 361 bits (182), Expect = 6e-098
Identities = 260/286 (90%)
Strand = Plus / Minus
Query: 269 gtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaag 328
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 543 gtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaag 484
Query: 329 tcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
|||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcgatctcatcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccggcc 424
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || |||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 423 gagttgccggggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctg 364
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
|||||||||||||| ||||| || |||||||||| ||||||||||||| ||||||||||
Sbjct: 363 gactggaacccggacccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcc 304
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
||| |||||| || |||||||||||||||||||| | ||||||||
Sbjct: 303 tggatcttgccacgaccgtcgccccacgtgatgtcgaactcctggt 258
>gb|BE356553.1|BE356553 DG1_126_C05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 454
Score = 359 bits (181), Expect = 2e-097
Identities = 266/295 (90%), Gaps = 1/295 (0%)
Strand = Plus / Minus
Query: 49 tcgnccagtcgtccgcgttcaacangctggagtagagcngcatcngctggctcttggg-a 107
||| ||||||||| |||||| ||| ||||||||||||| ||||| ||||| ||||||| |
Sbjct: 311 tcgcccagtcgtcggcgttccacaggctggagtagagccgcatcggctggttcttgggga 252
Query: 108 acgcaaccaccttgctctccaggttgcngaagtccctgatgngcatgtcgtccaccatga 167
|||| ||| |||||||||||||||| | |||||||||||| |||| |||||||||||||
Sbjct: 251 acgccacccccttgctctccaggttccggaagtccctgatcggcatctcgtccaccatga 192
Query: 168 agatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 227
||||||||||||||||||||||||||||||||||||| |||||||| |||||| || |
Sbjct: 191 agatgacgtgcttggggttccagaggatggagtaggtatggaagtccttggtgggatcaa 132
Query: 228 accagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgca 287
|||||||||||||||||||||||| ||| ||||| ||| | |||||||||||||||||||
Sbjct: 131 accagaggcggaactgctgctccctctgtccctggccctgggtgaacacgttggtgtgca 72
Query: 288 gcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtg 342
||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 71 gcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcatcgtg 17
>gb|BI075904.1|BI075904 IP1_22_G09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 540
Score = 353 bits (178), Expect = 1e-095
Identities = 259/286 (90%)
Strand = Plus / Minus
Query: 269 gtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaag 328
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 537 gtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaag 478
Query: 329 tcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcg 388
|||||||| ||||| | | ||||||||||||||||||||||||||||||||||||| |
Sbjct: 477 tcgatctcatcgtgggtgttgccctgcgacgacaggtagtaggcggtgacggtgccgtcc 418
Query: 389 gagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgg 448
|||||||| || |||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 417 gagttgccggggaccagcttcagctgcatgtcgatcttgccgaagaggtactcgtgcctg 358
Query: 449 gactggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtca 508
|||||||||||||| ||||| || |||||||||| ||||||||||||| ||||||||||
Sbjct: 357 gactggaacccggacccggaggtccggtccagcgtcagcgtcagcagctgcccgttgtcc 298
Query: 509 aggaccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
||| |||||| || |||||||||||||||||||| | ||||||||
Sbjct: 297 tggatcttgccacgaccgtcgccccacgtgatgtcgaactcctggt 252
>gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896478, DNA
sequence
Length = 735
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 628 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 569
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 568 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 509
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 508 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 449
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 448 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccag 389
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 388 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 329
Query: 466 gga 468
|||
Sbjct: 328 gga 326
>gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 591 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 532
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 531 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 472
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 471 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 412
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 411 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccag 352
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 351 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 292
Query: 466 gga 468
|||
Sbjct: 291 gga 289
>gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 596 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 537
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 536 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 477
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 476 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 417
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 416 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccag 357
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 356 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 297
Query: 466 gga 468
|||
Sbjct: 296 gga 294
>gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 608
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 595 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 536
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 535 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 476
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 475 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 416
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 415 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgccgggcaccag 356
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 355 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 296
Query: 466 gga 468
|||
Sbjct: 295 gga 293
>gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 589
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 586 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 527
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 526 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 467
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 466 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 407
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 406 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgccgggcaccag 347
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 346 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 287
Query: 466 gga 468
|||
Sbjct: 286 gga 284
>gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A05_A007 5', mRNA sequence
Length = 674
Score = 291 bits (147), Expect = 5e-077
Identities = 264/303 (87%)
Strand = Plus / Minus
Query: 166 gaagatgacgtgcttggggttccagaggatggagtaggtgtggaagtcggcggtggggtc 225
|||||| ||||||| |||||||| | | |||||||||||||||||| |||||||||
Sbjct: 605 gaagatcacgtgctgcgggttccacaccacggagtaggtgtggaagtccttggtggggtc 546
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 545 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 486
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 485 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 426
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||||
Sbjct: 425 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccag 366
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 365 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 306
Query: 466 gga 468
|||
Sbjct: 305 gga 303
>gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505213, DNA
sequence
Length = 732
Score = 287 bits (145), Expect = 7e-076
Identities = 241/273 (88%)
Strand = Plus / Minus
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 670 ggagtaggtgtggaagtccttggtggggtcgaaccagaggcggaactgctgctcgcgctg 611
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 610 gccctggccgccggtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgcc 551
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||| | | ||| ||||| || |||||| ||| |||
Sbjct: 550 gaggaactcgaagtcgatctcgtcgtgggtggggccttgcgaggagaggtagaaggtggt 491
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
|||||||||||| |||||||| ||||||||| | ||||||||||||||||||||| ||
Sbjct: 490 gacggtgccggccgagttgcctggcaccagcttgatctgcatgtcgatcttgccgaagag 431
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 430 gtactcggacttggactggaagccggagccgga 398
>gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 287 bits (145), Expect = 7e-076
Identities = 241/273 (88%)
Strand = Plus / Minus
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 ggagtaggtgtggaagtccttggtggggtcgaaccagaggcggaactgctgctcgcgctg 499
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 498 gccctggccgccggtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgcc 439
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||| | | ||| ||||| || |||||| ||| |||
Sbjct: 438 gaggaactcgaagtcgatctcgtcgtgggtggggccttgcgaggagaggtagaaggtggt 379
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
|||||||||||| |||||||| ||||||||| | ||||||||||||||||||||| ||
Sbjct: 378 gacggtgccggccgagttgcctggcaccagcttgatctgcatgtcgatcttgccgaagag 319
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 318 gtactcggacttggactggaagccggagccgga 286
>gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 287 bits (145), Expect = 7e-076
Identities = 241/273 (88%)
Strand = Plus / Minus
Query: 196 ggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaactgctgctcccgctg 255
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 ggagtaggtgtggaagtccttggtggggtcgaaccagaggcggaactgctgctcgcgctg 499
Query: 256 cccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcgccggacacgttgcc 315
||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 498 gccctggccgccggtgaacacgttggtgtgcagcgtgtagggctcgccggagacgttgcc 439
Query: 316 caggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggt 375
|||||||||||||||||||||||||| | | ||| ||||| || |||||| ||| |||
Sbjct: 438 gaggaactcgaagtcgatctcgtcgtgggtggggccttgcgaggagaggtagaaggtggt 379
Query: 376 gacggtgccggcggagttgcccggcaccagccgcagctgcatgtcgatcttgccgaacag 435
|||||||||||| |||||||| ||||||||| | ||||||||||||||||||||| ||
Sbjct: 378 gacggtgccggccgagttgcctggcaccagcttgatctgcatgtcgatcttgccgaagag 319
Query: 436 gtactcgtgccgggactggaacccggagccgga 468
||||||| | ||||||||| |||||||||||
Sbjct: 318 gtactcggacttggactggaagccggagccgga 286
>gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_51_G03_A002 5', mRNA sequence
Length = 520
Score = 272 bits (137), Expect = 4e-071
Identities = 314/373 (84%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 462 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 403
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 402 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 343
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 342 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 283
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 282 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 223
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| | |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 222 aagtggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 163
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 162 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 103
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 102 tccacgtcctggt 90
>gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 656
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 469 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 410
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 409 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 350
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 349 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 290
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 289 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 230
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 229 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 170
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 169 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 110
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 109 tccacgtcctggt 97
>gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f020l09, DNA
sequence
Length = 629
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Plus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 29 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 88
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 89 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 148
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 149 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 208
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 209 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 268
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 269 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 328
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 329 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 388
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 389 tccacgtcctggt 401
>gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 549 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 490
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 489 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 430
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 429 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 370
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 369 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 310
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 309 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 250
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 249 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 190
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 189 tccacgtcctggt 177
>gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 264 bits (133), Expect = 1e-068
Identities = 220/249 (88%)
Strand = Plus / Minus
Query: 220 ggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgtt 279
|||||||||||||||||||||||||||||| ||||| ||||| || | |||||||||||
Sbjct: 539 ggggtcgaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgtt 480
Query: 280 ggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtc 339
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 479 ggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtc 420
Query: 340 gtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccgg 399
||| | | ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||
Sbjct: 419 gtgggtggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctgg 360
Query: 400 caccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaaccc 459
||||||| | ||||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 359 caccagcttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagcc 300
Query: 460 ggagccgga 468
|||||||||
Sbjct: 299 ggagccgga 291
>gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 584
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 553 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 494
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 493 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 434
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 433 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 374
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 373 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 314
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 313 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 254
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 253 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 194
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 193 tccacgtcctggt 181
>gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_F11_A012 5', mRNA sequence
Length = 690
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 573 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 514
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 513 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 454
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 453 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 394
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 393 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 334
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 333 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 274
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 273 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 214
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 213 tccacgtcctggt 201
>gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_F09_A012 5', mRNA sequence
Length = 695
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 579 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 520
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 519 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 460
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 459 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 400
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 399 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 340
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 339 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 280
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 279 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 220
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 219 tccacgtcctggt 207
>gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_65_F03_A012 5', mRNA sequence
Length = 607
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 581 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 522
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 521 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 462
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 461 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 402
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 401 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 342
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 341 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 282
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 281 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 222
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 221 tccacgtcctggt 209
>gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_G11_A012 5', mRNA sequence
Length = 726
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 573 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 514
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 513 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 454
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 453 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 394
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 393 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 334
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 333 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 274
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 273 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 214
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 213 tccacgtcctggt 201
>gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_H10_A002 5', mRNA sequence
Length = 551
Score = 264 bits (133), Expect = 1e-068
Identities = 220/249 (88%)
Strand = Plus / Minus
Query: 220 ggggtcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgtt 279
|||||||||||||||||||||||||||||| ||||| ||||| || | |||||||||||
Sbjct: 551 ggggtcgaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgtt 492
Query: 280 ggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtc 339
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 491 ggtgtgcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtc 432
Query: 340 gtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccgg 399
||| | | ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||
Sbjct: 431 gtgggtggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctgg 372
Query: 400 caccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaaccc 459
||||||| | ||||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 371 caccagcttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagcc 312
Query: 460 ggagccgga 468
|||||||||
Sbjct: 311 ggagccgga 303
>gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_12_B12_A002 5', mRNA sequence
Length = 711
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 576 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 517
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 516 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 457
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 456 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 397
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 396 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 337
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 336 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 277
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 276 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 217
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 216 tccacgtcctggt 204
>gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 5', mRNA sequence
Length = 770
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 567 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 508
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 507 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 448
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 447 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 388
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 387 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 328
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 327 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 268
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 267 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 208
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 207 tccacgtcctggt 195
>gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_B04_A002 5', mRNA sequence
Length = 647
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 563 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 504
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 503 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 444
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 443 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 384
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 383 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 324
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 323 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 264
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 263 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 204
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 203 tccacgtcctggt 191
>gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_A12_A002 5', mRNA sequence
Length = 579
Score = 264 bits (133), Expect = 1e-068
Identities = 313/373 (83%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 567 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 508
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 507 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 448
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 447 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 388
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 387 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 328
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 327 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 268
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 267 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 208
Query: 542 tccagctcctggt 554
|||| |||||||
Sbjct: 207 tccacgtcctggt 195
>gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_A06_A002 5', mRNA sequence
Length = 697
Score = 262 bits (132), Expect = 4e-068
Identities = 306/364 (84%)
Strand = Plus / Minus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 547 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 488
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 487 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctcc 428
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 427 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 368
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 367 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 308
Query: 422 atcttgccgaacaggtactcgtgccgggactggaacccggagccggacgtgcggtccagc 481
| |||| | ||||||| | | |||||||||||| || ||||| | | |||||
Sbjct: 307 aagcggccgtagaggtactgggacttggactggaaccccgacccggaggacctgtccatg 248
Query: 482 gacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcgccccacgtgatg 541
||||||||||| ||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 247 gacagcgtcaggagctgcccgttgttcaggatcttgccacggccgtcgccccacgtgatg 188
Query: 542 tcca 545
||||
Sbjct: 187 tcca 184
>gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 502
Score = 256 bits (129), Expect = 3e-066
Identities = 216/245 (88%)
Strand = Plus / Minus
Query: 224 tcgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtg 283
|||||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||
Sbjct: 502 tcgaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtg 443
Query: 284 tgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgc 343
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 442 tgcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgg 383
Query: 344 gcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcacc 403
| | ||| ||||| || |||||| ||| ||||||||||||||| |||||||| ||||||
Sbjct: 382 gtggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcacc 323
Query: 404 agccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggag 463
||| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 322 agcttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggag 263
Query: 464 ccgga 468
|||||
Sbjct: 262 ccgga 258
>gb|BI211382.1|BI211382 IP1_60_A09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 467
Score = 256 bits (129), Expect = 3e-066
Identities = 186/205 (90%)
Strand = Plus / Minus
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |
Sbjct: 462 ccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagcttc 403
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccggac 469
||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 402 agctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaacccggacccggag 343
Query: 470 gtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtcg 529
|| |||||||||| ||||||||||||| |||||||||| ||| |||||| || ||||||
Sbjct: 342 gtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgccacgaccgtcg 283
Query: 530 ccccacgtgatgtccagctcctggt 554
|||||||||||||| | ||||||||
Sbjct: 282 ccccacgtgatgtcgaactcctggt 258
>gb|CL157537.1|CL157537 104_345_10783651_116_31478_211 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783651, DNA
sequence
Length = 426
Score = 250 bits (126), Expect = 2e-064
Identities = 186/206 (90%)
Strand = Plus / Minus
Query: 349 gccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccg 408
||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 413 gccctgcgacgacaggtagtaggcggtgacggtgccggccgagttgccggggaccagctt 354
Query: 409 cagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 353 cagttgcatgtcgatcttgccgaagaggtactcgtgcctggactggaacccggacccgga 294
Query: 469 cgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtc 528
|| |||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||
Sbjct: 293 ggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgccacgaccgtc 234
Query: 529 gccccacgtgatgtccagctcctggt 554
||||||||||||||| | ||||||||
Sbjct: 233 gccccacgtgatgtcgaactcctggt 208
>gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 246 bits (124), Expect = 3e-063
Identities = 211/240 (87%)
Strand = Plus / Minus
Query: 229 ccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcag 288
||||||||||||||||||||| ||||| ||||| || | ||||||||||||||||||||
Sbjct: 526 ccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtgcag 467
Query: 289 cgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgcc 348
|||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |
Sbjct: 466 cgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggtggg 407
Query: 349 gccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccg 408
||| ||||| || |||||| ||| ||||||||||||||| |||||||| |||||||||
Sbjct: 406 gccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccagctt 347
Query: 409 cagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 346 gatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagccgga 287
>gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_16_E07_A002 5', mRNA sequence
Length = 552
Score = 246 bits (124), Expect = 3e-063
Identities = 214/244 (87%)
Strand = Plus / Minus
Query: 225 cgaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgt 284
||||||||||||||||||||||||| ||||| ||||| || | |||| |||||||||||
Sbjct: 552 cgaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaccacgttggtgt 493
Query: 285 gcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcg 344
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 492 gcagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtggg 433
Query: 345 cgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcacca 404
| ||| ||||| || |||||| ||| ||||||||||||||| |||||||| |||||||
Sbjct: 432 tggggccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcacca 373
Query: 405 gccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagc 464
|| | ||||||||||||||||||||| ||||||||| | ||||||||| |||||||
Sbjct: 372 gcttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagc 313
Query: 465 cgga 468
||||
Sbjct: 312 cgga 309
>gb|BE363097.1|BE363097 DG1_9_H02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 532
Score = 244 bits (123), Expect = 1e-062
Identities = 210/239 (87%)
Strand = Plus / Minus
Query: 230 cagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagc 289
|||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||||
Sbjct: 532 cagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtgcagc 473
Query: 290 gtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccg 349
||||||||||||||||| |||||||| |||||||||||||||||||||||||| | | |
Sbjct: 472 gtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggtgggg 413
Query: 350 ccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgc 409
|| ||||| || |||||| ||| ||||||||||||||| |||||||| |||||||||
Sbjct: 412 ccttgcgaggagaggtagaaggtggtgacggtgccggccgagttgcctggcaccagcttg 353
Query: 410 agctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
| ||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||
Sbjct: 352 atctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagccgga 294
>gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_G02_A007 5', mRNA sequence
Length = 537
Score = 244 bits (123), Expect = 1e-062
Identities = 213/243 (87%)
Strand = Plus / Minus
Query: 226 gaaccagaggcggaactgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtg 285
|||||||||||||||||||||||| ||||| ||||| || | |||||||||||||||||
Sbjct: 537 gaaccagaggcggaactgctgctcgcgctggccctggccgccggtgaacacgttggtgtg 478
Query: 286 cagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgc 345
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct: 477 cagcgtgtagggctcgccggagacgttgccgaggaactcgaagtcgatctcgtcgtgggt 418
Query: 346 gccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccag 405
| ||| ||||| || |||||| ||| ||||||||||||||| | |||||| ||||||||
Sbjct: 417 ggggccttgcgaggagaggtagaaggtggtgacggtgccggccgggttgcctggcaccag 358
Query: 406 ccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagcc 465
| | ||||||||||||||||||||| ||||||||| | ||||||||| ||||||||
Sbjct: 357 cttgatctgcatgtcgatcttgccgaagaggtactcggacttggactggaagccggagcc 298
Query: 466 gga 468
|||
Sbjct: 297 gga 295
>gb|BE357579.1|BE357579 DG1_21_E10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 226 bits (114), Expect = 2e-057
Identities = 183/206 (88%)
Strand = Plus / Minus
Query: 349 gccctgcgacgacaggtagtaggcggtgacggtgccggcggagttgcccggcaccagccg 408
||||||| |||||||||||||| |||| |||| |||||| |||||||| || ||||||
Sbjct: 463 gccctgccacgacaggtagtagccggtcacggcgccggccgagttgccggggaccagctt 404
Query: 409 cagctgcatgtcgatcttgccgaacaggtactcgtgccgggactggaacccggagccgga 468
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 403 cagctgcatgtcgatcttgccgaagaggtactcgtgcctggactggaacccggacccgga 344
Query: 469 cgtgcggtccagcgacagcgtcagcagccgcccgttgtcaaggaccttgccccgcccgtc 528
|| |||||||||| ||||||||||||| |||||||||| ||| |||||| || |||||
Sbjct: 343 ggtccggtccagcgtcagcgtcagcagctgcccgttgtcctggatcttgccacgaccgtc 284
Query: 529 gccccacgtgatgtccagctcctggt 554
||||||||||||||| | ||||||||
Sbjct: 283 gccccacgtgatgtcgaactcctggt 258
>gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 660
Score = 224 bits (113), Expect = 9e-057
Identities = 209/241 (86%)
Strand = Plus / Plus
Query: 182 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcgaaccagaggcggaac 241
||||||||||| | ||||||| ||||||||| ||||||||||||||||| | ||||||
Sbjct: 388 gggttccagagcaccgagtaggcgtggaagtccgcggtggggtcgaaccacatccggaac 447
Query: 242 tgctgctcccgctgcccctgcccccgcgtgaacacgttggtgtgcagcgtgtagggctcg 301
|||||||||||| || | |||| | || ||||||||||||||| ||||||||||||
Sbjct: 448 tgctgctcccgcccgcctttcccctggctgtacacgttggtgtgcaccgtgtagggctct 507
Query: 302 ccggacacgttgcccaggaactcgaagtcgatctcgtcgtgcgcgccgccctgcgacgac 361
||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 508 ccgctcgcgttgccgaggaactcgaagtcgatctcgtcgtgggcgctgccctgcgaggag 567
Query: 362 aggtagtaggcggtgacggtgccggcggagttgcccggcaccagccgcagctgcatgtcg 421
|||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 568 aggtagaaggtggtgacggtgccggcggagttgcctggcaccagcttcagctgcatgtcg 627
Query: 422 a 422
|
Sbjct: 628 a 628
>gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 218 bits (110), Expect = 6e-055
Identities = 239/282 (84%)
Strand = Plus / Minus
Query: 273 acacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcga 332
||||||||||||||| |||||||||||| ||| | ||||||| ||||||||||||||||
Sbjct: 471 acacgttggtgtgcaccgtgtagggctctccgctcgcgttgccgaggaactcgaagtcga 412
Query: 333 tctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagt 392
|||||||||| |||| ||||||||| || |||||| ||| ||||||||||||||||||||
Sbjct: 411 tctcgtcgtgggcgctgccctgcgaggagaggtagaaggtggtgacggtgccggcggagt 352
Query: 393 tgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggact 452
|||| ||||||||| |||||||||||||| |||| | ||||||| | | |||||
Sbjct: 351 tgcctggcaccagcttcagctgcatgtcgaagcggccgtagaggtactgggacttggact 292
Query: 453 ggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaagga 512
||||||| || ||||| | | ||||| ||||||||||| ||| ||||||||| ||||
Sbjct: 291 ggaaccccgacccggaggacctgtccatggacagcgtcaggagctgcccgttgttcagga 232
Query: 513 ccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
|||||| || |||||||||||||||||||||| |||||||
Sbjct: 231 tcttgccacggccgtcgccccacgtgatgtccacgtcctggt 190
>gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 497
Score = 218 bits (110), Expect = 6e-055
Identities = 239/282 (84%)
Strand = Plus / Minus
Query: 273 acacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcga 332
||||||||||||||| |||||||||||| ||| | ||||||| ||||||||||||||||
Sbjct: 466 acacgttggtgtgcaccgtgtagggctctccgctcgcgttgccgaggaactcgaagtcga 407
Query: 333 tctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagt 392
|||||||||| |||| ||||||||| || |||||| ||| ||||||||||||||||||||
Sbjct: 406 tctcgtcgtgggcgctgccctgcgaggagaggtagaaggtggtgacggtgccggcggagt 347
Query: 393 tgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggact 452
|||| ||||||||| |||||||||||||| |||| | ||||||| | | |||||
Sbjct: 346 tgcctggcaccagcttcagctgcatgtcgaagcggccgtagaggtactgggacttggact 287
Query: 453 ggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaagga 512
||||||| || ||||| | | ||||| ||||||||||| ||| ||||||||| ||||
Sbjct: 286 ggaaccccgacccggaggacctgtccatggacagcgtcaggagctgcccgttgttcagga 227
Query: 513 ccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
|||||| || |||||||||||||||||||||| |||||||
Sbjct: 226 tcttgccacggccgtcgccccacgtgatgtccacgtcctggt 185
>gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 218 bits (110), Expect = 6e-055
Identities = 239/282 (84%)
Strand = Plus / Minus
Query: 273 acacgttggtgtgcagcgtgtagggctcgccggacacgttgcccaggaactcgaagtcga 332
||||||||||||||| |||||||||||| ||| | ||||||| ||||||||||||||||
Sbjct: 478 acacgttggtgtgcaccgtgtagggctctccgctcgcgttgccgaggaactcgaagtcga 419
Query: 333 tctcgtcgtgcgcgccgccctgcgacgacaggtagtaggcggtgacggtgccggcggagt 392
|||||||||| |||| ||||||||| || |||||| ||| ||||||||||||||||||||
Sbjct: 418 tctcgtcgtgggcgctgccctgcgaggagaggtagaaggtggtgacggtgccggcggagt 359
Query: 393 tgcccggcaccagccgcagctgcatgtcgatcttgccgaacaggtactcgtgccgggact 452
|||| ||||||||| |||||||||||||| |||| | ||||||| | | |||||
Sbjct: 358 tgcctggcaccagcttcagctgcatgtcgaagcggccgtagaggtactgggacttggact 299
Query: 453 ggaacccggagccggacgtgcggtccagcgacagcgtcagcagccgcccgttgtcaagga 512
||||||| || ||||| | | ||||| ||||||||||| ||| ||||||||| ||||
Sbjct: 298 ggaaccccgacccggaggacctgtccatggacagcgtcaggagctgcccgttgttcagga 239
Query: 513 ccttgccccgcccgtcgccccacgtgatgtccagctcctggt 554
|||||| || |||||||||||||||||||||| |||||||
Sbjct: 238 tcttgccacggccgtcgccccacgtgatgtccacgtcctggt 197
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 231,942
Number of Sequences: 832831
Number of extensions: 231942
Number of successful extensions: 63174
Number of sequences better than 0.5: 292
Number of HSP's better than 0.5 without gapping: 282
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 62417
Number of HSP's gapped (non-prelim): 696
length of query: 757
length of database: 491,359,669
effective HSP length: 20
effective length of query: 737
effective length of database: 474,703,049
effective search space: 349856147113
effective search space used: 349856147113
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)