BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3128444.2.1
(857 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkal... 630 e-179
gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sor... 569 e-160
gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkal... 559 e-157
gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkali... 531 e-149
gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkali... 446 e-123
gb|BG932995.1|BG932995 DG1_69_H05.g1_A002 Dark Grown 1 (DG1... 438 e-121
gb|CD231994.1|CD231994 SS1_31_E11.b1_A012 Salt-stressed see... 426 e-117
gb|CD233911.1|CD233911 SS1_5_B11.b1_A012 Salt-stressed seed... 349 3e-094
gb|CW390257.1|CW390257 fsbb001f075n12f0 Sorghum methylation... 329 2e-088
gb|CW029341.1|CW029341 104_256_10499619_114_30399 Sorghum m... 234 1e-059
gb|CW458790.1|CW458790 fsbb001f205d22f0 Sorghum methylation... 234 1e-059
gb|CW038580.1|CW038580 104_270_10505004_115_30386 Sorghum m... 226 3e-057
gb|CW165207.1|CW165207 104_573_11152383_148_36473_056 Sorgh... 218 6e-055
gb|CW110613.1|CW110613 104_483_11103812_148_34522_072 Sorgh... 165 8e-039
gb|BZ628246.1|BZ628246 ih58g10.g1 WGS-SbicolorF (DH5a methy... 147 2e-033
gb|CW029342.1|CW029342 104_256_10499619_116_30400 Sorghum m... 125 7e-027
gb|CW458791.1|CW458791 fsbb001f205d22k0 Sorghum methylation... 125 7e-027
gb|BE361086.1|BE361086 DG1_69_H05.b1_A002 Dark Grown 1 (DG1... 86 6e-015
gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves... 70 4e-010
gb|CW172245.1|CW172245 104_583_11156181_148_36534_089 Sorgh... 62 9e-008
gb|CW254111.1|CW254111 104_718_11225481_116_35118_045 Sorgh... 62 9e-008
gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1... 62 9e-008
gb|AI724790.1|AI724790 RHIZ1_9_C08.y2_A001 Rhizome1 (RHIZ1)... 62 9e-008
gb|AW283021.1|AW283021 LG1_301_G01.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW284398.1|AW284398 LG1_289_B04.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW282563.2|AW282563 LG1_312_A09.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW282564.2|AW282564 LG1_312_A08.g1_A002 Light Grown 1 (L... 62 9e-008
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 62 9e-008
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 62 9e-008
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 62 9e-008
gb|BF421234.1|BF421234 FM1_7_B10.g1_A003 Floral-Induced Mer... 62 9e-008
gb|BF421580.1|BF421580 FM1_9_F03.g1_A003 Floral-Induced Mer... 62 9e-008
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF587020.1|BF587020 FM1_32_C09.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 62 9e-008
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 62 9e-008
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 62 9e-008
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 62 9e-008
gb|BG052590.1|BG052590 RHIZ2_25_E04.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2)... 62 9e-008
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG103225.1|BG103225 RHIZ2_19_G03.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2... 62 9e-008
gb|BI245591.1|BI245591 IP1_67_E07.g1_A002 Immature pannicle... 62 9e-008
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 62 9e-008
gb|CB924788.1|CB924788 ABA1_28_G05.b1_A012 Abscisic acid-tr... 62 9e-008
gb|CB924804.1|CB924804 ABA1_28_G12.b1_A012 Abscisic acid-tr... 62 9e-008
gb|CB924927.1|CB924927 ABA1_29_G03.b1_A012 Abscisic acid-tr... 62 9e-008
gb|CB925873.1|CB925873 ABA1_30_D12.b1_A012 Abscisic acid-tr... 62 9e-008
gb|CD203975.1|CD203975 HS1_3_G04.b1_A012 Heat-shocked seedl... 62 9e-008
gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedl... 62 9e-008
gb|CD205133.1|CD205133 HS1_12_A10.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD206973.1|CD206973 HS1_26_H04.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD207069.1|CD207069 HS1_27_D10.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD208382.1|CD208382 HS1_37_A07.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD209345.1|CD209345 HS1_42_D07.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD210097.1|CD210097 HS1_57_F09.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD210149.1|CD210149 HS1_57_D05.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD210399.1|CD210399 HS1_51_F10.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD210870.1|CD210870 HS1_66_F09.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD211400.1|CD211400 HS1_60_H01.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD212567.1|CD212567 HS1_6_E05.b1_A012 Heat-shocked seedl... 62 9e-008
gb|CD213064.1|CD213064 HS1_28_A05.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD213196.1|CD213196 HS1_29_A11.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD213451.1|CD213451 HS1_41_D04.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD214077.1|CD214077 HS1_70_E04.b1_A012 Heat-shocked seed... 62 9e-008
gb|CD230120.1|CD230120 SS1_41_F06.b1_A012 Salt-stressed see... 62 9e-008
gb|CD230588.1|CD230588 SS1_47_A08.b1_A012 Salt-stressed see... 62 9e-008
gb|CD231980.1|CD231980 SS1_31_G03.b1_A012 Salt-stressed see... 62 9e-008
gb|CD232272.1|CD232272 SS1_39_F07.b1_A012 Salt-stressed see... 62 9e-008
gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed see... 62 9e-008
gb|CD232396.1|CD232396 SS1_45_D02.b1_A012 Salt-stressed see... 62 9e-008
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 62 9e-008
gb|CD233774.1|CD233774 SS1_4_B05.b1_A012 Salt-stressed seed... 62 9e-008
gb|CD235414.1|CD235414 SS1_29_H09.b1_A012 Salt-stressed see... 62 9e-008
gb|CD235827.1|CD235827 SS1_24_E03.b1_A012 Salt-stressed see... 62 9e-008
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 62 9e-008
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 62 9e-008
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 62 9e-008
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 62 9e-008
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 62 9e-008
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 62 9e-008
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 62 9e-008
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 62 9e-008
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 62 9e-008
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 62 9e-008
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 62 9e-008
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 62 9e-008
gb|CN134551.1|CN134551 OX1_27_C03.b1_A002 Oxidatively-stres... 62 9e-008
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 62 9e-008
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 62 9e-008
gb|CN141820.1|CN141820 WOUND1_2_C04.b1_A002 Wounded leaves ... 62 9e-008
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 62 9e-008
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 62 9e-008
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 62 9e-008
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 62 9e-008
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 62 9e-008
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 62 9e-008
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 62 9e-008
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 62 9e-008
gb|CN145798.1|CN145798 WOUND1_35_G12.b1_A002 Wounded leaves... 62 9e-008
gb|CN145904.1|CN145904 WOUND1_36_C07.b1_A002 Wounded leaves... 62 9e-008
gb|CN145942.1|CN145942 WOUND1_36_H04.b1_A002 Wounded leaves... 62 9e-008
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 62 9e-008
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 62 9e-008
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 62 9e-008
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 62 9e-008
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 62 9e-008
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 62 9e-008
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 62 9e-008
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 62 9e-008
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 62 9e-008
gb|CN150415.1|CN150415 WOUND1_69_B07.b1_A002 Wounded leaves... 62 9e-008
gb|CN151687.1|CN151687 WOUND1_77_A09.b1_A002 Wounded leaves... 62 9e-008
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 62 9e-008
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 62 9e-008
gb|CF675648.1|CF675648 DHUR Subtractive cDNA library from s... 62 9e-008
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 62 9e-008
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 62 9e-008
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 62 9e-008
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 62 9e-008
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 62 9e-008
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 62 9e-008
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 62 9e-008
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 62 9e-008
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 62 9e-008
gb|CX618845.1|CX618845 GABR1_42_B07.b1_A002 GA- or brassino... 62 9e-008
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 62 9e-008
gb|CX619661.1|CX619661 GABR1_47_B01.b1_A002 GA- or brassino... 62 9e-008
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 62 9e-008
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 62 9e-008
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 62 9e-008
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 62 9e-008
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 62 9e-008
gb|DN552528.1|DN552528 pSHR-RT-A-H1_C03_C331 pSHR Sorghum h... 62 9e-008
gb|DN552694.1|DN552694 pSHR-RT-MR-H1_C05_C331 pSHR Sorghum ... 62 9e-008
gb|DN552710.1|DN552710 pSHR-RT-MR-H1_A11_C383 pSHR Sorghum ... 62 9e-008
gb|DN552712.1|DN552712 pSHR-RT-MR-H1_B06_C383 pSHR Sorghum ... 62 9e-008
gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum ... 62 9e-008
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 62 9e-008
gb|CW210000.1|CW210000 104_640_11189560_116_37000_060 Sorgh... 60 4e-007
gb|AW284341.2|AW284341 LG1_275_C12.g1_A002 Light Grown 1 (L... 60 4e-007
gb|AW286529.2|AW286529 LG1_334_A07.g1_A002 Light Grown 1 (L... 60 4e-007
gb|AW677220.1|AW677220 DG1_6_D11.g1_A002 Dark Grown 1 (DG1)... 60 4e-007
gb|AW744827.1|AW744827 LG1_384_D09.g1_A002 Light Grown 1 (L... 60 4e-007
gb|AW922651.1|AW922651 DG1_20_B09.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|AW923628.1|AW923628 DG1_56_E12.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE356472.1|BE356472 DG1_125_D03.g1_A002 Dark Grown 1 (DG... 60 4e-007
gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE359750.1|BE359750 DG1_56_E12.g2_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 60 4e-007
gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) So... 60 4e-007
gb|BG557199.1|BG557199 EM1_43_H09.g1_A002 Embryo 1 (EM1) So... 60 4e-007
gb|BG557200.1|BG557200 EM1_43_H10.g1_A002 Embryo 1 (EM1) So... 60 4e-007
gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-tr... 60 4e-007
gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficie... 60 4e-007
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 60 4e-007
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 60 4e-007
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 60 4e-007
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 60 4e-007
gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassino... 60 4e-007
gb|CX620938.1|CX620938 GABR1_55_B01.b1_A002 GA- or brassino... 60 4e-007
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 60 4e-007
gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Me... 56 6e-006
gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed see... 56 6e-006
gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficien... 56 6e-006
gb|BG050532.1|BG050532 FM1_72_E07.g1_A003 Floral-Induced Me... 54 2e-005
gb|BG052581.1|BG052581 RHIZ2_25_C09.g1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|CB924610.1|CB924610 ABA1_1_C01.b1_A012 Abscisic acid-tre... 54 2e-005
gb|CD208086.1|CD208086 HS1_31_E06.b1_A012 Heat-shocked seed... 54 2e-005
gb|CD230338.1|CD230338 SS1_43_H07.b1_A012 Salt-stressed see... 54 2e-005
gb|CD432478.1|CD432478 ETH1_30_D10.b1_A002 Ethylene-treated... 54 2e-005
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 54 2e-005
gb|CN143277.1|CN143277 WOUND1_15_E07.b1_A002 Wounded leaves... 54 2e-005
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 54 2e-005
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 54 2e-005
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 54 2e-005
gb|CN147899.1|CN147899 WOUND1_53_A07.b1_A002 Wounded leaves... 54 2e-005
gb|CN148093.1|CN148093 WOUND1_54_D09.b1_A002 Wounded leaves... 54 2e-005
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 54 2e-005
gb|CX615873.1|CX615873 GABR1_24_B10.b1_A002 GA- or brassino... 54 2e-005
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 54 2e-005
gb|CX620964.1|CX620964 GABR1_55_D10.b1_A002 GA- or brassino... 54 2e-005
gb|CX621923.1|CX621923 GABR1_61_A11.b2_A002 GA- or brassino... 54 2e-005
gb|CW077452.1|CW077452 104_381_10892527_116_31765_127 Sorgh... 52 9e-005
gb|CW077453.1|CW077453 104_381_10892527_148_31764_127 Sorgh... 52 9e-005
gb|CW112744.1|CW112744 104_486_11105051_116_34545_036 Sorgh... 52 9e-005
gb|CW112745.1|CW112745 104_486_11105051_148_34541_036 Sorgh... 52 9e-005
gb|CW128496.1|CW128496 104_510_11114036_148_34753_078 Sorgh... 52 9e-005
gb|CW143523.1|CW143523 104_535_11137466_116_34955_009 Sorgh... 52 9e-005
gb|CW143524.1|CW143524 104_535_11137466_148_34959_009 Sorgh... 52 9e-005
gb|CW164626.1|CW164626 104_572_11152084_148_36463_004 Sorgh... 52 9e-005
gb|CW391208.1|CW391208 fsbb001f077d18f0 Sorghum methylation... 52 9e-005
gb|BG103244.1|BG103244 RHIZ2_20_B09.g1_A003 Rhizome2 (RHIZ2... 52 9e-005
gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves... 52 9e-005
gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassino... 52 9e-005
gb|CD204671.1|CD204671 HS1_9_C05.b1_A012 Heat-shocked seedl... 46 0.005
gb|CD231440.1|CD231440 SS1_16_H09.b1_A012 Salt-stressed see... 46 0.005
gb|CW081454.1|CW081454 104_419_10941845_116_32296_023 Sorgh... 44 0.021
gb|CW190500.1|CW190500 104_612_11174536_148_36759_062 Sorgh... 44 0.021
gb|CW457729.1|CW457729 fsbb001f203k19f0 Sorghum methylation... 44 0.021
gb|CW457730.1|CW457730 fsbb001f203k19k0 Sorghum methylation... 44 0.021
gb|CN124461.1|CN124461 RHOH1_5_A02.b1_A002 Acid- and alkali... 44 0.021
gb|CW274641.1|CW274641 104_747_11404533_116_35374_085 Sorgh... 42 0.083
gb|CW299705.1|CW299705 104_782_11463260_148_35687_068 Sorgh... 42 0.083
gb|CW472326.1|CW472326 fsbb001f227d11f0 Sorghum methylation... 42 0.083
gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adap... 40 0.33
gb|CW041475.1|CW041475 104_275_10506567_114_30284 Sorghum m... 40 0.33
gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum m... 40 0.33
gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum m... 40 0.33
gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorgh... 40 0.33
gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorgh... 40 0.33
gb|CW286115.1|CW286115 104_763_11410706_116_35510_003 Sorgh... 40 0.33
gb|CW286116.1|CW286116 104_763_11410706_148_35506_003 Sorgh... 40 0.33
gb|CW494468.1|CW494468 fsbb001f285m07k0 Sorghum methylation... 40 0.33
gb|CW498861.1|CW498861 fsbb001f293f01k0 Sorghum methylation... 40 0.33
gb|AW744826.1|AW744826 LG1_384_D08.g1_A002 Light Grown 1 (L... 40 0.33
gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1... 40 0.33
gb|BE353123.1|BE353123 DG1_4_B08.g1_A002 Dark Grown 1 (DG1)... 40 0.33
gb|BE363478.1|BE363478 WS1_63_C10.g1_A002 Water-stressed 1 ... 40 0.33
gb|BE594793.1|BE594793 PI1_45_E09.g1_A002 Pathogen induced ... 40 0.33
gb|BE918696.1|BE918696 FM1_1_D09.g1_A003 Floral-Induced Mer... 40 0.33
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 40 0.33
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 40 0.33
gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Me... 40 0.33
gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Me... 40 0.33
gb|BF656644.1|BF656644 FM1_52_H05.g1_A003 Floral-Induced Me... 40 0.33
gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2)... 40 0.33
gb|BG049800.1|BG049800 FM1_65_F12.g1_A003 Floral-Induced Me... 40 0.33
gb|BG158629.1|BG158629 RHIZ2_43_A03.g1_A003 Rhizome2 (RHIZ2... 40 0.33
gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sor... 40 0.33
gb|BG322962.1|BG322962 EM1_13_C03.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG355803.1|BG355803 EM1_16_H10.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|BG412449.1|BG412449 OV2_34_C11.g1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sor... 40 0.33
gb|BG463211.1|BG463211 EM1_47_G10.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG463348.1|BG463348 EM1_48_D09.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG556673.1|BG556673 EM1_40_B08.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG557742.1|BG557742 EM1_56_D07.g1_A002 Embryo 1 (EM1) So... 40 0.33
gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2... 40 0.33
gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle ... 40 0.33
gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle... 40 0.33
gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle... 40 0.33
gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle... 40 0.33
gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle... 40 0.33
gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle... 40 0.33
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 40 0.33
gb|BM329553.1|BM329553 PIC1_39_F04.g1_A002 Pathogen-infecte... 40 0.33
gb|BM330591.1|BM330591 PIC1_54_A02.g1_A002 Pathogen-infecte... 40 0.33
gb|BM330874.1|BM330874 PIC1_57_F09.g1_A002 Pathogen-infecte... 40 0.33
gb|BM331059.1|BM331059 PIC1_69_B01.g1_A002 Pathogen-infecte... 40 0.33
gb|BM331271.1|BM331271 PIC1_71_H07.g1_A002 Pathogen-infecte... 40 0.33
gb|CD225406.1|CD225406 CCC1_3_E07.b1_A007 Callus culture/ce... 40 0.33
gb|CD231415.1|CD231415 SS1_16_C04.b1_A012 Salt-stressed see... 40 0.33
gb|CD425421.1|CD425421 SA1_12_H11.b1_A002 Salicylic acid-tr... 40 0.33
gb|CD427707.1|CD427707 SA1_38_E06.b1_A002 Salicylic acid-tr... 40 0.33
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 40 0.33
gb|CF430694.1|CF430694 NIT1_2_F09.b1_A002 Nitrogen-deficien... 40 0.33
gb|CN145862.1|CN145862 WOUND1_35_F12.g1_A002 Wounded leaves... 40 0.33
gb|CN148058.1|CN148058 WOUND1_54_A06.b1_A002 Wounded leaves... 40 0.33
gb|DN552554.1|DN552554 pSHR-RT-A-H1_A06_C383 pSHR Sorghum h... 40 0.33
gb|DN552711.1|DN552711 pSHR-RT-MR-H1_B03_C383 pSHR Sorghum ... 40 0.33
>gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_C12_A002 3', mRNA sequence
Length = 731
Score = 630 bits (318), Expect = e-179
Identities = 441/482 (91%)
Strand = Plus / Plus
Query: 213 ccaaaatcctgatgatgtttatttctacaaagtgcaacaaatggagagagtagaaaaatg 272
||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 1 ccaaaatccagatgatgtttatttctaccaagtgcaacaaatggagagaatagaaaaatg 60
Query: 273 gagtagtggtgaaagcatcggtgaaagggctgcatctgaatggcttgtcatagttccttg 332
|| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 gaatagtggtgaaaaaattggtgaaagggctgcatctgaatggcttttcatagttccttg 120
Query: 333 gggccttcataaattacttaactatatagtgaagaaatacaacagtccagtaatttatgt 392
|||||||| |||| ||||||| |||||||||||||||||||| | ||||||||||||| |
Sbjct: 121 gggccttcgtaaagtacttaattatatagtgaagaaatacaataatccagtaatttatat 180
Query: 393 tactgagaatggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaa 452
||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 181 tactgagaatggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaa 240
Query: 453 cgacacgaagagagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaa 512
||||||| |||||||| |||||||| |||||||||||||| ||||| || || |||||
Sbjct: 241 tgacacgacaagagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaa 300
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 301 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 360
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| ||||||| |||||
Sbjct: 361 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaacgggctgtccag 420
Query: 633 gcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaa 692
||| || || ||||||||||| |||||||||||| |||| ||||||||||||||||||||
Sbjct: 421 gcatcctaaagcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaa 480
Query: 693 ca 694
||
Sbjct: 481 ca 482
>gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 684
Score = 569 bits (287), Expect = e-160
Identities = 407/447 (91%)
Strand = Plus / Plus
Query: 248 aacaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgcat 307
|||||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 1 aacaaatggagagaatagaaaaatggaatagtggtgaaaaaattggtgaaagggctgcat 60
Query: 308 ctgaatggcttgtcatagttccttggggccttcataaattacttaactatatagtgaaga 367
||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||
Sbjct: 61 ctgaatggcttttcatagttccttggggccttcgtaaagtacttaattatatagtgaaga 120
Query: 368 aatacaacagtccagtaatttatgttactgagaatggcatggatgatgaagacgatcaat 427
||||||| | ||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 121 aatacaataatccagtaatttatattactgagaatggcatggatgatgaagatgatcaat 180
Query: 428 ccgcaacgattgaccaggtcctaaacgacacgaagagagtcggctacttcaacggatacc 487
||||||| |||||||||||||||| ||||||| |||||||| |||||||| |||||||
Sbjct: 181 ccgcaacacttgaccaggtcctaaatgacacgacaagagtcggttacttcaaaggatacc 240
Query: 488 tcaattcggttgcgcaggcgatcaaggacggggctgatgtccgtgggtacttcgcgtggt 547
||||||| ||||| || || ||||||||||| |||||| ||||||||||||| |||||||
Sbjct: 241 tcaattcagttgcacaagccatcaaggacggagctgatatccgtgggtactttgcgtggt 300
Query: 548 cattcctggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacg 607
|||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 301 cattcctggacaactttgagtgggctatgggctacaccaagaggtttggtatagtttacg 360
Query: 608 tcgattacaaggacgggctctccaggcaccccaaggcatcggccctctggttctcgcgcc 667
||||||||||| | ||||| |||||||| || || ||||||||||| ||||||||||||
Sbjct: 361 tcgattacaagaatgggctgtccaggcatcctaaagcatcggccctgtggttctcgcgct 420
Query: 668 tcctcaagggcgaggctgccgaaaaca 694
|||| ||||||||||||||||||||||
Sbjct: 421 tcctgaagggcgaggctgccgaaaaca 447
>gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_E11_A002 3', mRNA sequence
Length = 809
Score = 559 bits (282), Expect = e-157
Identities = 405/446 (90%)
Strand = Plus / Plus
Query: 249 acaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgcatc 308
||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 1 acaaatggagagaatagaaaaatggaatagtggtgaaaaaattggtgaaagggctgcatc 60
Query: 309 tgaatggcttgtcatagttccttggggccttcataaattacttaactatatagtgaagaa 368
|||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 61 tgaatggcttttcatagttccttggggccttcgtaaagtacttaattatatagtgaagaa 120
Query: 369 atacaacagtccagtaatttatgttactgagaatggcatggatgatgaagacgatcaatc 428
|||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 121 atacaataatccagtaatttatattactgagaatggcatggatgatgaagatgatcaatc 180
Query: 429 cgcaacgattgaccaggtcctaaacgacacgaagagagtcggctacttcaacggatacct 488
|||||| |||||||||||||||| ||||||| |||||||| |||||||| ||||||||
Sbjct: 181 cgcaacacttgaccaggtcctaaatgacacgacaagagtcggttacttcaaaggatacct 240
Query: 489 caattcggttgcgcaggcgatcaaggacggggctgatgtccgtgggtacttcgcgtggtc 548
|||||| ||||| || || ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 241 caattcagttgcacaagccatcaaggacggagctgatatccgtgggtactttgcgtggtc 300
Query: 549 attcctggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgt 608
||||||||||||||| |||||||||||||||| |||||||||||| || ||||| |||||
Sbjct: 301 attcctggacaactttgagtgggctatgggctgcaccaagaggtttggtatagtttacgt 360
Query: 609 cgattacaaggacgggctctccaggcaccccaaggcatcggccctctggttctcgcgcct 668
|||||||||| | ||||| |||||||| || || ||||||||||| |||||||||||| |
Sbjct: 361 cgattacaagaatgggctgtccaggcatcctaaagcatcggccctgtggttctcgcgctt 420
Query: 669 cctcaagggcgaggctgccgaaaaca 694
||| ||||||||||||||||||||||
Sbjct: 421 cctgaagggcgaggctgccgaaaaca 446
>gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 3', mRNA sequence
Length = 799
Score = 531 bits (268), Expect = e-149
Identities = 391/432 (90%)
Strand = Plus / Plus
Query: 263 tagaaaaatggagtagtggtgaaagcatcggtgaaagggctgcatctgaatggcttgtca 322
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct: 4 tagaaaaatggaatagtggtgaaaaaattggtgaaagggctgcatctgaatggcttttca 63
Query: 323 tagttccttggggccttcataaattacttaactatatagtgaagaaatacaacagtccag 382
|||| ||||||||||||| |||| ||||||| |||||||||||||||||||| | |||||
Sbjct: 64 tagtaccttggggccttcgtaaagtacttaattatatagtgaagaaatacaataatccag 123
Query: 383 taatttatgttactgagaatggcatggatgatgaagacgatcaatccgcaacgattgacc 442
|||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 124 taatttatattactgagaatggcatggatgatgaagatgatcaatccgcaacacttgacc 183
Query: 443 aggtcctaaacgacacgaagagagtcggctacttcaacggatacctcaattcggttgcgc 502
|||||||||| ||||||| |||||||| |||||||| |||||||||||||| ||||| |
Sbjct: 184 aggtcctaaatgacacgacaagagtcggttacttcaaaggatacctcaattcagttgcac 243
Query: 503 aggcgatcaaggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaact 562
| || ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 244 aagccatcaaggacggagctgacatccgtgggtactttgcgtggtcattcctggacaact 303
Query: 563 tcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacg 622
| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||| | |
Sbjct: 304 ttgagtgggctatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatg 363
Query: 623 ggctctccaggcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgagg 682
|||| |||||||| || || ||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 364 ggctgtccaggcatcctaaagcatcggccctgtggttctcgcgcttcctgaagggcgagg 423
Query: 683 ctgccgaaaaca 694
||||||||||||
Sbjct: 424 ctgccgaaaaca 435
>gb|CN124070.1|CN124070 RHOH1_2_A09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 5', mRNA sequence
Length = 626
Score = 446 bits (225), Expect = e-123
Identities = 246/253 (97%)
Strand = Plus / Plus
Query: 9 agaccaaattgctgcacaacggaggattgactttcaacttggatggtacctagatccaat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 371 agaccaaattgctgcacaacggaggattgactttcaacttggatggtacctagatccgat 430
Query: 69 atattttggtgattacccagaaagcatgcgtcagcgactgggcagtgatcttccaacctt 128
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 431 atattttggtgattacccagaaagcatgcgtcaacgactgggcagtgatcttccaacctt 490
Query: 129 ctcagagaaagataaagaattcatcaggaacaaaattgattttattggactaaatcatta 188
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 ctcagagaaagataaagaattcatcaggaacaaaattgattttattggactgaatcatta 550
Query: 189 tacttcgaggctcattgcccatcaccaaaatcctgatgatgtttatttctacaaagtgca 248
||||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct: 551 tacttcgagactcattgctcatcaccaaaatccagatgatgtttatttctaccaagtgca 610
Query: 249 acaaatggagaga 261
|||||||||||||
Sbjct: 611 acaaatggagaga 623
>gb|BG932995.1|BG932995 DG1_69_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 438 bits (221), Expect = e-121
Identities = 320/353 (90%)
Strand = Plus / Plus
Query: 342 taaattacttaactatatagtgaagaaatacaacagtccagtaatttatgttactgagaa 401
|||| ||||||| |||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 2 taaagtacttaattatatagtgaagaaatacaataatccagtaatttatattactgagaa 61
Query: 402 tggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaa 461
|||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 62 tggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgac 121
Query: 462 gagagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaaggacggggc 521
|||||||| |||||||| |||||||||||||| ||||| || || ||||||||||| ||
Sbjct: 122 aagagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaaggacggagc 181
Query: 522 tgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggcta 581
|||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 182 tgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggctatgggcta 241
Query: 582 caccaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaa 641
|||||||||||| || ||||| ||||||||||||||| | ||||| |||||||| || ||
Sbjct: 242 caccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccaggcatcctaa 301
Query: 642 ggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaaca 694
||||||||||| |||||||||||| |||| ||||||||||||||||||||||
Sbjct: 302 agcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaaca 354
>gb|CD231994.1|CD231994 SS1_31_E11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_31_E11_A012 3', mRNA sequence
Length = 636
Score = 426 bits (215), Expect = e-117
Identities = 308/339 (90%)
Strand = Plus / Plus
Query: 356 atatagtgaagaaatacaacagtccagtaatttatgttactgagaatggcatggatgatg 415
||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 atatagtgaagaaatacaataatccagtaatttatattactgagaatggcatggatgatg 60
Query: 416 aagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaagagagtcggctact 475
|||| |||||||||||||| |||||||||||||||| ||||||| |||||||| ||||
Sbjct: 61 aagatgatcaatccgcaacacttgaccaggtcctaaatgacacgacaagagtcggttact 120
Query: 476 tcaacggatacctcaattcggttgcgcaggcgatcaaggacggggctgatgtccgtgggt 535
|||| |||||||||||||| ||||| || || ||||||||||| |||||| |||||||||
Sbjct: 121 tcaaaggatacctcaattcagttgcacaagccatcaaggacggagctgatatccgtgggt 180
Query: 536 acttcgcgtggtcattcctggacaacttcgagtgggctatgggctacaccaagaggttcg 595
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 181 actttgcgtggtcattcctggacaactttgagtgggctatgggctacaccaagaggtttg 240
Query: 596 gcatagtctacgtcgattacaaggacgggctctccaggcaccccaaggcatcggccctct 655
| ||||| ||||||||||||||| | ||||| |||||||| || || ||||||||||| |
Sbjct: 241 gtatagtttacgtcgattacaagaatgggctgtccaggcatcctaaagcatcggccctgt 300
Query: 656 ggttctcgcgcctcctcaagggcgaggctgccgaaaaca 694
||||||||||| |||| ||||||||||||||||||||||
Sbjct: 301 ggttctcgcgcttcctgaagggcgaggctgccgaaaaca 339
>gb|CD233911.1|CD233911 SS1_5_B11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_5_B11_A012 3', mRNA sequence
Length = 659
Score = 349 bits (176), Expect = 3e-094
Identities = 263/292 (90%)
Strand = Plus / Plus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||
Sbjct: 16 ggcatggatgatgaagatgatcaatccgcgacacttgaccaggtcctaaatgacacgaca 75
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaaggacggggct 522
|||||||| |||||||| |||||||||||||| ||||| || || ||||||||||| |||
Sbjct: 76 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaaggacggagct 135
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 136 gatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggctatgggctac 195
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || ||||| ||||||||||||||| | ||||| |||||||| || ||
Sbjct: 196 accaagaggtttggtatagtttacgtcgattacaagaatgggctgtccaggcatcctaaa 255
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaaca 694
||||||||||| |||||||||||| |||| ||||||||||||||||||||||
Sbjct: 256 gcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaaca 307
>gb|CW390257.1|CW390257 fsbb001f075n12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f075n12, DNA
sequence
Length = 332
Score = 329 bits (166), Expect = 2e-088
Identities = 190/198 (95%)
Strand = Plus / Plus
Query: 53 ggtacctagatccaatatattttggtgattacccagaaagcatgcgtcagcgactgggca 112
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 135 ggtacctagatccgatatattttggtgattacccagaaagcatgcgtcaacgactgggca 194
Query: 113 gtgatcttccaaccttctcagagaaagataaagaattcatcaggaacaaaattgatttta 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtgatcttccaaccttctcagagaaagataaagaattcatcaggaacaaaattgatttta 254
Query: 173 ttggactaaatcattatacttcgaggctcattgcccatcaccaaaatcctgatgatgttt 232
||||||| ||||||||||||||||| |||||||| |||| ||||||||| ||||||||||
Sbjct: 255 ttggactgaatcattatacttcgagactcattgctcatccccaaaatccagatgatgttt 314
Query: 233 atttctacaaagtgcaac 250
|||||||| |||||||||
Sbjct: 315 atttctaccaagtgcaac 332
>gb|CW029341.1|CW029341 104_256_10499619_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499619, DNA
sequence
Length = 728
Score = 234 bits (118), Expect = 1e-059
Identities = 166/182 (91%)
Strand = Plus / Minus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 454 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 395
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| | ||||| |||||
Sbjct: 394 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccag 335
Query: 633 gcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaa 692
||| || || ||||||||||| |||||||||||| |||| ||||||||||||||||||||
Sbjct: 334 gcatcctaaagcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaa 275
Query: 693 ca 694
||
Sbjct: 274 ca 273
Score = 117 bits (59), Expect = 2e-024
Identities = 98/111 (88%)
Strand = Plus / Minus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||
Sbjct: 679 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcgtaaatgacacgaca 620
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 619 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 569
>gb|CW458790.1|CW458790 fsbb001f205d22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f205d22, DNA
sequence
Length = 654
Score = 234 bits (118), Expect = 1e-059
Identities = 166/182 (91%)
Strand = Plus / Minus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 216 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 157
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| | ||||| |||||
Sbjct: 156 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccag 97
Query: 633 gcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaa 692
||| || || ||||||||||| |||||||||||| |||| ||||||||||||||||||||
Sbjct: 96 gcatcctaaagcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaa 37
Query: 693 ca 694
||
Sbjct: 36 ca 35
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 441 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 382
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 381 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 331
>gb|CW038580.1|CW038580 104_270_10505004_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505004, DNA
sequence
Length = 708
Score = 226 bits (114), Expect = 3e-057
Identities = 165/182 (90%)
Strand = Plus / Plus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 473 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 532
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| | ||||| |||||
Sbjct: 533 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccag 592
Query: 633 gcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaa 692
||| || || ||||||||||| |||||||||||| |||| ||||||||||||| ||||||
Sbjct: 593 gcatcctaaagcatcggccctgtggttctcgcgcttcctgaagggcgaggctggcgaaaa 652
Query: 693 ca 694
||
Sbjct: 653 ca 654
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 248 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 307
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 308 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 358
>gb|CW165207.1|CW165207 104_573_11152383_148_36473_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152383, DNA
sequence
Length = 721
Score = 218 bits (110), Expect = 6e-055
Identities = 164/182 (90%)
Strand = Plus / Minus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 246 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 187
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| | ||||| |||||
Sbjct: 186 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccag 127
Query: 633 gcaccccaaggcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaa 692
||| || || ||||||||||| |||||| |||| |||| ||||||||||||||||||||
Sbjct: 126 gcatcctaaagcatcggccctgtggttcaagcgcttcctgaagggcgaggctgccgaaaa 67
Query: 693 ca 694
||
Sbjct: 66 ca 65
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 471 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 412
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 411 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 361
>gb|CW110613.1|CW110613 104_483_11103812_148_34522_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103812, DNA
sequence
Length = 644
Score = 165 bits (83), Expect = 8e-039
Identities = 113/123 (91%)
Strand = Plus / Minus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 132 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 73
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacgggctctccag 632
||||||||||||||||||||| || ||||| ||||||||||||||| | ||||| |||||
Sbjct: 72 tatgggctacaccaagaggtttggtatagtttacgtcgattacaagaatgggctgtccag 13
Query: 633 gca 635
|||
Sbjct: 12 gca 10
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 357 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 298
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 297 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 247
>gb|BZ628246.1|BZ628246 ih58g10.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih58g10 5', DNA sequence
Length = 675
Score = 147 bits (74), Expect = 2e-033
Identities = 95/102 (93%)
Strand = Plus / Plus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggc 572
|||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 574 ggacggagctgatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggc 633
Query: 573 tatgggctacaccaagaggttcggcatagtctacgtcgatta 614
||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 634 tatgggctacaccaagaggtttggtatagtttacgtcgatta 675
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 349 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 408
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 409 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 459
>gb|CW029342.1|CW029342 104_256_10499619_116_30400 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499619, DNA
sequence
Length = 787
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 569 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 628
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 629 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 679
>gb|CW458791.1|CW458791 fsbb001f205d22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f205d22, DNA
sequence
Length = 671
Score = 125 bits (63), Expect = 7e-027
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 400 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 459
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaag 513
|||||||| |||||||| |||||||||||||| ||||| || || ||||||
Sbjct: 460 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaag 510
Score = 69.9 bits (35), Expect = 4e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 513 ggacggggctgatgtccgtgggtacttcgcgtggtcattcctggaca 559
|||||| |||||| ||||||||||||| |||||||||||||||||||
Sbjct: 625 ggacggagctgatatccgtgggtactttgcgtggtcattcctggaca 671
>gb|BE361086.1|BE361086 DG1_69_H05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 625
Score = 85.7 bits (43), Expect = 6e-015
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 9 agaccaaattgctgcacaacggaggattgactttcaacttgga 51
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agaccaaattgctgcacaacggaggattgactttcaacttgga 625
>gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_H04_A002 3', mRNA sequence
Length = 603
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| |||||||||| || | |||||||| ||||||||||||
Sbjct: 233 tggacaacttcgagtggtctaggggctacaccgagcgtttcggcattgtctacgtcgat 291
>gb|CW172245.1|CW172245 104_583_11156181_148_36534_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156181, DNA
sequence
Length = 693
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 492 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 434
>gb|CW254111.1|CW254111 104_718_11225481_116_35118_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225481, DNA
sequence
Length = 574
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 452 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 510
>gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 639
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 324 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 382
>gb|AI724790.1|AI724790 RHIZ1_9_C08.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 481
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 171 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 229
>gb|AW283021.1|AW283021 LG1_301_G01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 391
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 96 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 154
>gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 201 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 259
>gb|AW284398.1|AW284398 LG1_289_B04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 405
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 88 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 146
>gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 524
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 215 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 273
>gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 524
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 215 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 273
>gb|AW282563.2|AW282563 LG1_312_A09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 344
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 96 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 154
>gb|AW282564.2|AW282564 LG1_312_A08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 247
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 90 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 148
>gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 628
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 334 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 392
>gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 656
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 404 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 462
>gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 409 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 467
>gb|BF421234.1|BF421234 FM1_7_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 361
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 108 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 166
>gb|BF421580.1|BF421580 FM1_9_F03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 432
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 165 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 223
>gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 538
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 256 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 314
>gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 483
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 212 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 270
>gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 681
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 434 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 492
>gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 663
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 395 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 453
>gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 325 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 383
>gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 334 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 392
>gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 458
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 194 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 252
>gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 607
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 338 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 396
>gb|BF587020.1|BF587020 FM1_32_C09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 365
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 12 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 70
>gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 498
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 251 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 309
>gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 654
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 409 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 467
>gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 633
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 359 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 417
>gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 686
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 423 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 481
>gb|BG052590.1|BG052590 RHIZ2_25_E04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 471
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 162 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 220
>gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 678
Score = 61.9 bits (31), Expect = 9e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 554 tggacaacttcgagtgggctatgggctacaccaagaggttcggcatagtctacgtcgat 612
||||||||||||||||| ||| ||||||||| || | |||||||| ||||||||||||
Sbjct: 415 tggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgat 473
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 190,783
Number of Sequences: 832831
Number of extensions: 190783
Number of successful extensions: 52520
Number of sequences better than 0.5: 290
Number of HSP's better than 0.5 without gapping: 289
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52181
Number of HSP's gapped (non-prelim): 339
length of query: 857
length of database: 491,359,669
effective HSP length: 20
effective length of query: 837
effective length of database: 474,703,049
effective search space: 397326452013
effective search space used: 397326452013
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)