BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012915.2.2
(621 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE356171.1|BE356171 DG1_123_G07.b1_A002 Dark Grown 1 (DG... 337 7e-091
gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (L... 204 7e-051
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 204 7e-051
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 167 2e-039
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 167 2e-039
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 167 2e-039
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 167 2e-039
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 167 2e-039
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 155 6e-036
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 155 6e-036
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 155 6e-036
gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation... 155 6e-036
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 155 6e-036
gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1... 155 6e-036
gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/c... 155 6e-036
gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/c... 155 6e-036
gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves... 155 6e-036
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 151 9e-035
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 151 9e-035
gb|BF421073.1|BF421073 FM1_6_A06.g1_A003 Floral-Induced Mer... 149 4e-034
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 147 1e-033
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 147 1e-033
gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2... 147 1e-033
gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/ce... 147 1e-033
gb|CD227643.1|CD227643 CCC1_52_B10.g1_A007 Callus culture/c... 143 2e-032
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 143 2e-032
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 143 2e-032
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 143 2e-032
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 143 2e-032
gb|BF480853.1|BF480853 FM1_14_B05.g1_A003 Floral-Induced Me... 139 3e-031
gb|CD226700.1|CD226700 CCC1_47_B03.g1_A007 Callus culture/c... 139 3e-031
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 137 1e-030
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 137 1e-030
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 137 1e-030
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 137 1e-030
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 137 1e-030
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 135 5e-030
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 135 5e-030
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 135 5e-030
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 135 5e-030
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 135 5e-030
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 129 3e-028
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 129 3e-028
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 129 3e-028
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 127 1e-027
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 127 1e-027
gb|CW389686.1|CW389686 fsbb001f075a01k0 Sorghum methylation... 123 2e-026
gb|CW407264.1|CW407264 fsbb001f100k14f0 Sorghum methylation... 123 2e-026
gb|CW463846.1|CW463846 fsbb001f212l24f0 Sorghum methylation... 123 2e-026
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 123 2e-026
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 123 2e-026
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 123 2e-026
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 121 8e-026
gb|CD222040.1|CD222040 CCC1_1_E10.g1_A007 Callus culture/ce... 119 3e-025
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 119 3e-025
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 119 3e-025
gb|BG411924.1|BG411924 OV2_39_G10.g1_A002 Ovary 2 (OV2) Sor... 117 1e-024
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 117 1e-024
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 115 5e-024
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 113 2e-023
gb|CW020721.1|CW020721 104_109_10409131_114_30493 Sorghum m... 111 8e-023
gb|BE361723.1|BE361723 DG1_81_B09.g1_A002 Dark Grown 1 (DG1... 111 8e-023
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 111 8e-023
gb|BM323374.1|BM323374 PIC1_18_E10.b1_A002 Pathogen-infecte... 111 8e-023
gb|CN141913.1|CN141913 WOUND1_2_E01.g1_A002 Wounded leaves ... 109 3e-022
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 107 1e-021
gb|BG649399.1|BG649399 EM1_78_H11.b1_A002 Embryo 1 (EM1) So... 107 1e-021
gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/c... 107 1e-021
gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed see... 107 1e-021
gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassino... 107 1e-021
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 105 5e-021
gb|CW134909.1|CW134909 104_519_11117560_116_34831_060 Sorgh... 105 5e-021
gb|CW134910.1|CW134910 104_519_11117560_148_34827_060 Sorgh... 105 5e-021
gb|CW256800.1|CW256800 104_722_11226991_116_35152_032 Sorgh... 105 5e-021
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 105 5e-021
gb|CW323838.1|CW323838 104_818_11476843_148_35908_078 Sorgh... 105 5e-021
gb|CW372271.1|CW372271 fsbb001f048b19k0 Sorghum methylation... 105 5e-021
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 105 5e-021
gb|BG240144.1|BG240144 OV1_18_D11.b1_A002 Ovary 1 (OV1) Sor... 105 5e-021
gb|BG560106.1|BG560106 RHIZ2_69_D11.b1_A003 Rhizome2 (RHIZ2... 105 5e-021
gb|BG739602.1|BG739602 EM1_82_H04.b1_A002 Embryo 1 (EM1) So... 105 5e-021
gb|CD219737.1|CD219737 CCC1_58_F06.g1_A007 Callus culture/c... 105 5e-021
gb|CD219794.1|CD219794 CCC1_58_F07.g1_A007 Callus culture/c... 105 5e-021
gb|CD223869.1|CD223869 CCC1_30_D11.g1_A007 Callus culture/c... 105 5e-021
gb|CD225188.1|CD225188 CCC1_38_A02.g1_A007 Callus culture/c... 105 5e-021
gb|CD229498.1|CD229498 CCC1_16_D06.g1_A007 Callus culture/c... 105 5e-021
gb|CD430094.1|CD430094 ETH1_13_H07.g1_A002 Ethylene-treated... 105 5e-021
gb|CD431281.1|CD431281 ETH1_7_B06.g1_A002 Ethylene-treated ... 105 5e-021
gb|CD432249.1|CD432249 ETH1_26_B01.g1_A002 Ethylene-treated... 105 5e-021
gb|CF427585.1|CF427585 PH1_16_B04.g1_A002 Phosphorous-defic... 105 5e-021
gb|CN124076.1|CN124076 RHOH1_2_B05.g1_A002 Acid- and alkali... 105 5e-021
gb|CN140959.1|CN140959 OX1_48_A09.g1_A002 Oxidatively-stres... 105 5e-021
gb|CX620046.1|CX620046 GABR1_49_B08.g1_A002 GA- or brassino... 103 2e-020
gb|CW115054.1|CW115054 104_490_11106333_116_34592_095 Sorgh... 100 3e-019
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 100 3e-019
gb|BZ367792.1|BZ367792 id06f03.b1 WGS-SbicolorF (JM107 adap... 98 1e-018
gb|BG559467.1|BG559467 RHIZ2_55_B12.b1_A003 Rhizome2 (RHIZ2... 98 1e-018
gb|CF427084.1|CF427084 PH1_3_D05.g1_A002 Phosphorous-defici... 98 1e-018
gb|CF429257.1|CF429257 PH1_20_E04.g1_A002 Phosphorous-defic... 98 1e-018
gb|CN135238.1|CN135238 OX1_31_B04.g1_A002 Oxidatively-stres... 98 1e-018
gb|CW060786.1|CW060786 104_304_10520046_114_30143 Sorghum m... 96 5e-018
gb|BE360258.1|BE360258 DG1_62_E04.b1_A002 Dark Grown 1 (DG1... 90 3e-016
gb|BE361499.1|BE361499 DG1_81_B09.b1_A002 Dark Grown 1 (DG1... 90 3e-016
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 90 3e-016
gb|CN128492.1|CN128492 RHOH1_29_H02.g1_A002 Acid- and alkal... 90 3e-016
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 84 2e-014
gb|CL191208.1|CL191208 104_410_10906632_114_32533_096 Sorgh... 82 7e-014
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 82 7e-014
gb|CW229188.1|CW229188 104_670_11207171_116_37259_042 Sorgh... 82 7e-014
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 82 7e-014
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 82 7e-014
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 80 3e-013
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 80 3e-013
gb|CW125506.1|CW125506 104_505_11112364_148_34712_004 Sorgh... 80 3e-013
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 80 3e-013
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 80 3e-013
gb|CW229189.1|CW229189 104_670_11207171_148_37260_042 Sorgh... 80 3e-013
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 80 3e-013
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 80 3e-013
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 80 3e-013
gb|BI245881.1|BI245881 IP1_64_F11.b1_A002 Immature pannicle... 80 3e-013
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 80 3e-013
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 80 3e-013
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 80 3e-013
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 80 3e-013
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 80 3e-013
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 80 3e-013
gb|CN127847.1|CN127847 RHOH1_25_A03.g1_A002 Acid- and alkal... 76 4e-012
gb|BE359360.1|BE359360 DG1_40_D05.g1_A002 Dark Grown 1 (DG1... 74 2e-011
gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1... 74 2e-011
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 74 2e-011
gb|CW225715.1|CW225715 104_663_11204503_148_37208_024 Sorgh... 72 7e-011
gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2... 70 3e-010
gb|BI245792.1|BI245792 IP1_64_D12.g1_A002 Immature pannicle... 70 3e-010
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 64 2e-008
gb|CW247382.1|CW247382 104_708_11221754_148_36079_009 Sorgh... 62 6e-008
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 58 1e-006
gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2... 58 1e-006
gb|CW186182.1|CW186182 104_604_11166433_116_36705_013 Sorgh... 56 4e-006
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 56 4e-006
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 56 4e-006
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 56 4e-006
gb|CD226681.1|CD226681 CCC1_47_B03.b1_A007 Callus culture/c... 56 4e-006
gb|CD430578.1|CD430578 ETH1_19_F11.g1_A002 Ethylene-treated... 56 4e-006
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 56 4e-006
gb|CX610279.1|CX610279 ANR1_17_E04.g1_A002 Anaerobic roots ... 56 4e-006
gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) So... 54 2e-005
gb|CF488833.1|CF488833 POL1_52_B08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle... 52 6e-005
gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/c... 52 6e-005
gb|CN127845.1|CN127845 RHOH1_25_A01.g1_A002 Acid- and alkal... 52 6e-005
gb|BE362269.1|BE362269 DG1_85_A02.b1_A002 Dark Grown 1 (DG1... 50 2e-004
gb|CD432148.1|CD432148 ETH1_26_B01.b1_A002 Ethylene-treated... 50 2e-004
gb|BZ346961.1|BZ346961 hw02c11.b1 WGS-SbicolorF (JM107 adap... 48 0.001
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 48 0.001
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 48 0.001
gb|CW067110.1|CW067110 104_314_10524068_114_30126 Sorghum m... 48 0.001
gb|CW072445.1|CW072445 104_325_10592270_114_30536 Sorghum m... 48 0.001
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 48 0.001
gb|CW223947.1|CW223947 104_660_11203186_148_37446_047 Sorgh... 48 0.001
gb|CW322132.1|CW322132 104_815_11475928_116_35944_052 Sorgh... 48 0.001
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 48 0.001
gb|BE357900.1|BE357900 DG1_23_H03.b1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BG050942.1|BG050942 FM1_54_C04.b1_A003 Floral-Induced Me... 48 0.001
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 48 0.001
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 48 0.001
gb|CF480248.1|CF480248 POL1_64_D03.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF482883.1|CF482883 POL1_9_F05.g1_A002 Pollen Sorghum bi... 48 0.001
gb|CF483753.1|CF483753 POL1_24_B02.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF484051.1|CF484051 POL1_2_G08.g1_A002 Pollen Sorghum bi... 48 0.001
gb|CF485106.1|CF485106 POL1_29_A12.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF485127.1|CF485127 POL1_29_C12.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF485306.1|CF485306 POL1_30_E09.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF487377.1|CF487377 POL1_43_A08.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF487564.1|CF487564 POL1_44_C08.g1_A002 Pollen Sorghum b... 48 0.001
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 48 0.001
gb|CF487872.1|CF487872 POL1_46_A03.g1_A002 Pollen Sorghum b... 48 0.001
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 48 0.001
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 48 0.001
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 48 0.001
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 48 0.001
gb|CW060787.1|CW060787 104_304_10520046_115_30144 Sorghum m... 46 0.004
gb|CW113135.1|CW113135 104_487_11105276_116_34556_076 Sorgh... 46 0.004
gb|AI724776.1|AI724776 RHIZ1_9_A10.y2_A001 Rhizome1 (RHIZ1)... 46 0.004
gb|BG559878.1|BG559878 RHIZ2_74_G01.g1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|BG560466.1|BG560466 RHIZ2_74_G01.b1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|BG560741.1|BG560741 RHIZ2_64_B11.g1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|CF480285.1|CF480285 POL1_64_G06.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF480333.1|CF480333 POL1_65_D03.b1_A002 Pollen Sorghum b... 46 0.004
gb|CF480411.1|CF480411 POL1_65_D03.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF481055.1|CF481055 POL1_69_E05.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF481186.1|CF481186 POL1_70_B02.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 46 0.004
gb|CF483330.1|CF483330 POL1_21_B07.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF486570.1|CF486570 POL1_38_B03.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF486737.1|CF486737 POL1_39_A11.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF486753.1|CF486753 POL1_39_C04.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF486763.1|CF486763 POL1_39_D02.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF487232.1|CF487232 POL1_42_C05.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF487409.1|CF487409 POL1_43_D04.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF487428.1|CF487428 POL1_43_F02.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF488401.1|CF488401 POL1_49_E12.g1_A002 Pollen Sorghum b... 46 0.004
gb|CF488708.1|CF488708 POL1_51_E07.g1_A002 Pollen Sorghum b... 46 0.004
gb|CN124005.1|CN124005 RHOH1_2_B05.b1_A002 Acid- and alkali... 46 0.004
gb|CW028553.1|CW028553 104_255_10499163_114_30394 Sorghum m... 44 0.015
gb|CW062333.1|CW062333 104_307_10521280_5_30083 Sorghum met... 44 0.015
gb|CW072446.1|CW072446 104_325_10592270_116_30540 Sorghum m... 44 0.015
gb|BE359286.1|BE359286 DG1_40_D05.b1_A002 Dark Grown 1 (DG1... 44 0.015
gb|BG102852.1|BG102852 RHIZ2_34_B12.b1_A003 Rhizome2 (RHIZ2... 44 0.015
gb|BG556160.1|BG556160 EM1_68_E05.b1_A002 Embryo 1 (EM1) So... 44 0.015
gb|BG558190.1|BG558190 RHIZ2_64_B11.b1_A003 Rhizome2 (RHIZ2... 44 0.015
gb|CD226829.1|CD226829 CCC1_48_E12.b1_A007 Callus culture/c... 44 0.015
gb|CF429640.1|CF429640 PH1_23_B11.b1_A002 Phosphorous-defic... 44 0.015
gb|CF485258.1|CF485258 POL1_30_A03.g1_A002 Pollen Sorghum b... 44 0.015
gb|CF488821.1|CF488821 POL1_52_A06.g1_A002 Pollen Sorghum b... 44 0.015
gb|CL177774.1|CL177774 104_385_10894067_116_31914_131 Sorgh... 42 0.060
gb|CW036113.1|CW036113 104_267_10503572_114_30374 Sorghum m... 42 0.060
gb|CW038534.1|CW038534 104_270_10504977_115_30386 Sorghum m... 42 0.060
gb|CW038651.1|CW038651 104_271_10505052_115_30388 Sorghum m... 42 0.060
gb|CW061064.1|CW061064 104_304_10520199_114_30143 Sorghum m... 42 0.060
gb|CW099293.1|CW099293 104_466_11003472_148_34379_094 Sorgh... 42 0.060
gb|CW123167.1|CW123167 104_502_11111067_148_34685_010 Sorgh... 42 0.060
gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorgh... 42 0.060
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 42 0.060
gb|CW262165.1|CW262165 104_729_11229907_116_35207_070 Sorgh... 42 0.060
gb|CW262166.1|CW262166 104_729_11229907_148_35203_070 Sorgh... 42 0.060
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 42 0.060
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 42 0.060
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 42 0.060
gb|CW313747.1|CW313747 104_804_11471451_116_35794_014 Sorgh... 42 0.060
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 42 0.060
gb|CW333019.1|CW333019 104_830_11481720_116_36037_082 Sorgh... 42 0.060
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 42 0.060
gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation... 42 0.060
gb|CW417496.1|CW417496 fsbb001f120i17k0 Sorghum methylation... 42 0.060
gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation... 42 0.060
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 42 0.060
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 42 0.060
gb|CW443845.1|CW443845 fsbb001f164c15f0 Sorghum methylation... 42 0.060
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 42 0.060
gb|CW464904.1|CW464904 fsbb001f215g10f0 Sorghum methylation... 42 0.060
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 42 0.060
gb|AW286877.2|AW286877 LG1_222_F02.b1_A002 Light Grown 1 (L... 42 0.060
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 42 0.060
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 42 0.060
gb|BG048727.1|BG048727 OV1_22_C03.b1_A002 Ovary 1 (OV1) Sor... 42 0.060
gb|BI139874.1|BI139874 IP1_46_G07.b1_A002 Immature pannicle... 42 0.060
gb|CD220835.1|CD220835 CCC1_69_G07.g1_A007 Callus culture/c... 42 0.060
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 42 0.060
gb|CD221137.1|CD221137 CCC1_73_H10.g1_A007 Callus culture/c... 42 0.060
gb|CD221711.1|CD221711 CCC1_70_E10.g1_A007 Callus culture/c... 42 0.060
gb|CD222212.1|CD222212 CCC1_2_B01.g1_A007 Callus culture/ce... 42 0.060
gb|CD223170.1|CD223170 CCC1_26_C06.g1_A007 Callus culture/c... 42 0.060
gb|CD223182.1|CD223182 CCC1_26_F12.g1_A007 Callus culture/c... 42 0.060
gb|CD223373.1|CD223373 CCC1_27_E07.g1_A007 Callus culture/c... 42 0.060
gb|CD223670.1|CD223670 CCC1_29_B07.g1_A007 Callus culture/c... 42 0.060
gb|CD224343.1|CD224343 CCC1_33_D02.g1_A007 Callus culture/c... 42 0.060
gb|CD225200.1|CD225200 CCC1_38_F05.g1_A007 Callus culture/c... 42 0.060
gb|CD227137.1|CD227137 CCC1_4_D07.g1_A007 Callus culture/ce... 42 0.060
gb|CD228110.1|CD228110 CCC1_5_B06.g1_A007 Callus culture/ce... 42 0.060
gb|CD229177.1|CD229177 CCC1_13_B09.g1_A007 Callus culture/c... 42 0.060
gb|CD430276.1|CD430276 ETH1_17_H06.g1_A002 Ethylene-treated... 42 0.060
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 42 0.060
gb|CD463948.1|CD463948 ETH1_47_B11.g1_A002 Ethylene-treated... 42 0.060
gb|CF427443.1|CF427443 PH1_1_A07.g1_A002 Phosphorous-defici... 42 0.060
gb|CF480054.1|CF480054 POL1_63_A12.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF480457.1|CF480457 POL1_65_H06.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF480661.1|CF480661 POL1_67_D07.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF480711.1|CF480711 POL1_67_A06.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF480730.1|CF480730 POL1_67_C02.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF480745.1|CF480745 POL1_67_D07.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF481066.1|CF481066 POL1_69_F07.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF481234.1|CF481234 POL1_70_F07.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF481418.1|CF481418 POL1_71_H03.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF481566.1|CF481566 POL1_72_E12.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF482510.1|CF482510 POL1_7_A01.g1_A002 Pollen Sorghum bi... 42 0.060
gb|CF482685.1|CF482685 POL1_8_B05.g1_A002 Pollen Sorghum bi... 42 0.060
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF483231.1|CF483231 POL1_12_E10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF483250.1|CF483250 POL1_12_H10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF483491.1|CF483491 POL1_22_D07.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF484048.1|CF484048 POL1_2_G04.g1_A002 Pollen Sorghum bi... 42 0.060
gb|CF484303.1|CF484303 POL1_4_A10.g1_A002 Pollen Sorghum bi... 42 0.060
gb|CF484478.1|CF484478 POL1_25_C05.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF484676.1|CF484676 POL1_26_G05.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF484688.1|CF484688 POL1_26_H05.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF484984.1|CF484984 POL1_28_F03.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF486443.1|CF486443 POL1_37_E10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF486596.1|CF486596 POL1_38_D06.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF486598.1|CF486598 POL1_38_D08.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF486803.1|CF486803 POL1_39_G10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF487066.1|CF487066 POL1_41_C03.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF488078.1|CF488078 POL1_47_D10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF488105.1|CF488105 POL1_47_G06.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF488363.1|CF488363 POL1_49_A10.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF488671.1|CF488671 POL1_51_B05.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF488732.1|CF488732 POL1_51_G09.g1_A002 Pollen Sorghum b... 42 0.060
gb|CF489097.1|CF489097 POL1_54_H09.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF489352.1|CF489352 POL1_57_C07.b1_A002 Pollen Sorghum b... 42 0.060
gb|CF489435.1|CF489435 POL1_57_C07.g1_A002 Pollen Sorghum b... 42 0.060
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 42 0.060
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 42 0.060
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 42 0.060
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 42 0.060
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 42 0.060
gb|CN134318.1|CN134318 OX1_25_D04.g1_A002 Oxidatively-stres... 42 0.060
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 42 0.060
gb|CN134481.1|CN134481 OX1_26_D04.g1_A002 Oxidatively-stres... 42 0.060
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 42 0.060
gb|CN134664.1|CN134664 OX1_27_E09.g1_A002 Oxidatively-stres... 42 0.060
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 42 0.060
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 42 0.060
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 42 0.060
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 42 0.060
gb|CX607460.1|CX607460 ANR1_8_G05.g1_A002 Anaerobic roots S... 42 0.060
gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots ... 42 0.060
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 42 0.060
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 42 0.060
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 42 0.060
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 42 0.060
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 42 0.060
gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adap... 40 0.24
gb|BZ780043.1|BZ780043 ii36g12.g1 WGS-SbicolorF (DH5a methy... 40 0.24
gb|CW133670.1|CW133670 104_517_11116887_148_34814_056 Sorgh... 40 0.24
gb|CW217957.1|CW217957 104_651_11195928_116_37067_090 Sorgh... 40 0.24
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 40 0.24
gb|CW229431.1|CW229431 104_670_11207297_116_37255_067 Sorgh... 40 0.24
gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorgh... 40 0.24
gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorgh... 40 0.24
gb|CW369801.1|CW369801 fsbb001f044g11f0 Sorghum methylation... 40 0.24
gb|CW430464.1|CW430464 fsbb001f144d01f0 Sorghum methylation... 40 0.24
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 40 0.24
gb|AW286828.2|AW286828 LG1_222_A03.b1_A002 Light Grown 1 (L... 40 0.24
gb|BE359027.1|BE359027 DG1_38_C11.b1_A002 Dark Grown 1 (DG1... 40 0.24
gb|BG047628.1|BG047628 OV1_26_C01.b1_A002 Ovary 1 (OV1) Sor... 40 0.24
gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sor... 40 0.24
gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sor... 40 0.24
gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sor... 40 0.24
gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sor... 40 0.24
gb|BG101785.1|BG101785 EM1_5_B12.b1_A002 Embryo 1 (EM1) Sor... 40 0.24
gb|BG559514.1|BG559514 RHIZ2_55_F12.b1_A003 Rhizome2 (RHIZ2... 40 0.24
gb|CD432350.1|CD432350 ETH1_29_E02.g1_A002 Ethylene-treated... 40 0.24
gb|CF484979.1|CF484979 POL1_28_E10.g1_A002 Pollen Sorghum b... 40 0.24
gb|CF485494.1|CF485494 POL1_31_H02.g1_A002 Pollen Sorghum b... 40 0.24
gb|CF485662.1|CF485662 POL1_32_G11.g1_A002 Pollen Sorghum b... 40 0.24
gb|CF485937.1|CF485937 POL1_34_E02.g1_A002 Pollen Sorghum b... 40 0.24
gb|CF487642.1|CF487642 POL1_45_C01.b1_A002 Pollen Sorghum b... 40 0.24
gb|CF487896.1|CF487896 POL1_46_C05.g1_A002 Pollen Sorghum b... 40 0.24
gb|CF488549.1|CF488549 POL1_50_E04.g1_A002 Pollen Sorghum b... 40 0.24
gb|CX611587.1|CX611587 ANR1_25_B12.g1_A002 Anaerobic roots ... 40 0.24
gb|CX620331.1|CX620331 GABR1_51_E02.b1_A002 GA- or brassino... 40 0.24
>gb|BE356171.1|BE356171 DG1_123_G07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 337 bits (170), Expect = 7e-091
Identities = 214/229 (93%)
Strand = Plus / Plus
Query: 21 gctccaagcacgccgcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaact 80
||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||
Sbjct: 354 gctccaagcacgccgcctgctccggccgcaccgagacggtggtgatcacggacatgaact 413
Query: 81 acaccccgggcgtcgcgccctaccacttcgacctcagcggcaccgccttcggcaggctgg 140
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 414 acaccccgggcgtggcgccctaccacttcgacctcagcggcaccgccttcggcaagctgg 473
Query: 141 ccaagcccggccgcaacgacgacctgcgccgcgccggcatcatcgacatccagttcgcca 200
|||||||||||||||||||||| || |||||||| || |||||||||||||||||| |||
Sbjct: 474 ccaagcccggccgcaacgacgagctccgccgcgcggggatcatcgacatccagttcacca 533
Query: 201 gggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgagga 249
|||| |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 534 gggtgccctgcgagttcccgggcctcanagtcggcttccacgtcgagga 582
>gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 355
Score = 204 bits (103), Expect = 7e-051
Identities = 199/231 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 118 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 177
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | ||||||||||||||||| ||||| ||||||| || |||||||||||
Sbjct: 178 aagctccgccactccggcatcatcgacatcgagttcaccagggtgccgtgcgagttccct 237
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
|| || ||| |||| |||||||| ||||| ||| | || ||||||||||| ||||||
Sbjct: 238 gggctgaagatcggtttccacgtggaggagtactcgaaccccgtctacttcgcggtgctg 297
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| ||||||||| |||||||||||||||| || ||||| ||||| ||||||
Sbjct: 298 gtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgatggag 348
>gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 204 bits (103), Expect = 7e-051
Identities = 199/231 (86%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 169 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 228
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccca 220
| || |||| | ||||||||||||||||| ||||| ||||||| || |||||||||||
Sbjct: 229 aagctccgccactccggcatcatcgacatcgagttcaccagggtgccgtgcgagttccct 288
Query: 221 ggcctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctg 280
|| || ||| |||| |||||||| ||||| ||| | || ||||||||||| ||||||
Sbjct: 289 gggctgaagatcggtttccacgtggaggagtactcgaaccccgtctacttcgcggtgctg 348
Query: 281 gtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| ||||||||| |||||||||||||||| || ||||| ||||| ||||||
Sbjct: 349 gtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgatggag 399
Score = 65.9 bits (33), Expect = 4e-009
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| || |||||||||||||| | ||| ||||||||||| ||
Sbjct: 433 tggacgcccatgcgcgagtcctgaggatccatctggcggatggacaccaaccaccgcatg 492
Query: 407 cagccacccttct 419
||||| |||||||
Sbjct: 493 cagccgcccttct 505
>gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804467, DNA
sequence
Length = 687
Score = 167 bits (84), Expect = 2e-039
Identities = 226/270 (83%), Gaps = 5/270 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
||||||| |||||||||||| ||| ||| || |||||||||||||||||||||||||
Sbjct: 306 tcatcacggacatgaactactaccc---cgtggccccctaccacttcgacctcagcggca 362
Query: 123 ccgccttcggcaggc-tggccaagcccggccgcaacgacgacctgcgccgcgccggcatc 181
|||||||||| || | ||||||| || |||||||||||| ||||||| ||| ||||||
Sbjct: 363 ccgccttcgg-agccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatc 421
Query: 182 atcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccac 241
||||||||||||||| ||||| |||||| ||| ||| ||||||| ||| |||||||
Sbjct: 422 atcgacatccagttcaagagggttccctgccagtaccctggcctcaccgtcaccttccac 481
Query: 242 gtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgac 301
||||| ||||||| || |||| | |||||||| |||||||||| |||||||||
Sbjct: 482 atcgagcgcggctccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgac 541
Query: 302 ggcgacgtcgtccaggtcgacctcatggag 331
||||||||||| ||||||||||||||||||
Sbjct: 542 ggcgacgtcgtgcaggtcgacctcatggag 571
>gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145777, DNA
sequence
Length = 672
Score = 167 bits (84), Expect = 2e-039
Identities = 226/270 (83%), Gaps = 5/270 (1%)
Strand = Plus / Minus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
||||||| |||||||||||| ||| ||| || |||||||||||||||||||||||||
Sbjct: 270 tcatcacggacatgaactactaccc---cgtggccccctaccacttcgacctcagcggca 214
Query: 123 ccgccttcggcaggc-tggccaagcccggccgcaacgacgacctgcgccgcgccggcatc 181
|||||||||| || | ||||||| || |||||||||||| ||||||| ||| ||||||
Sbjct: 213 ccgccttcgg-agccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatc 155
Query: 182 atcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccac 241
||||||||||||||| ||||| |||||| ||| ||| ||||||| ||| |||||||
Sbjct: 154 atcgacatccagttcaagagggttccctgccagtaccctggcctcaccgtcaccttccac 95
Query: 242 gtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgac 301
||||| ||||||| || |||| | |||||||| |||||||||| |||||||||
Sbjct: 94 atcgagcgcggctccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgac 35
Query: 302 ggcgacgtcgtccaggtcgacctcatggag 331
||||||||||| ||||||||||||||||||
Sbjct: 34 ggcgacgtcgtgcaggtcgacctcatggag 5
>gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221754, DNA
sequence
Length = 639
Score = 167 bits (84), Expect = 2e-039
Identities = 226/270 (83%), Gaps = 5/270 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
||||||| |||||||||||| ||| ||| || |||||||||||||||||||||||||
Sbjct: 256 tcatcacggacatgaactactaccc---cgtggccccctaccacttcgacctcagcggca 312
Query: 123 ccgccttcggcaggc-tggccaagcccggccgcaacgacgacctgcgccgcgccggcatc 181
|||||||||| || | ||||||| || |||||||||||| ||||||| ||| ||||||
Sbjct: 313 ccgccttcgg-agccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatc 371
Query: 182 atcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccac 241
||||||||||||||| ||||| |||||| ||| ||| ||||||| ||| |||||||
Sbjct: 372 atcgacatccagttcaagagggttccctgccagtaccctggcctcaccgtcaccttccac 431
Query: 242 gtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgac 301
||||| ||||||| || |||| | |||||||| |||||||||| |||||||||
Sbjct: 432 atcgagcgcggctccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgac 491
Query: 302 ggcgacgtcgtccaggtcgacctcatggag 331
||||||||||| ||||||||||||||||||
Sbjct: 492 ggcgacgtcgtgcaggtcgacctcatggag 521
>gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475820, DNA
sequence
Length = 668
Score = 167 bits (84), Expect = 2e-039
Identities = 226/270 (83%), Gaps = 5/270 (1%)
Strand = Plus / Plus
Query: 63 tcatcaccgacatgaactacaccccgggcgtcgcgccctaccacttcgacctcagcggca 122
||||||| |||||||||||| ||| ||| || |||||||||||||||||||||||||
Sbjct: 184 tcatcacggacatgaactactaccc---cgtggccccctaccacttcgacctcagcggca 240
Query: 123 ccgccttcggcaggc-tggccaagcccggccgcaacgacgacctgcgccgcgccggcatc 181
|||||||||| || | ||||||| || |||||||||||| ||||||| ||| ||||||
Sbjct: 241 ccgccttcgg-agccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatc 299
Query: 182 atcgacatccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccac 241
||||||||||||||| ||||| |||||| ||| ||| ||||||| ||| |||||||
Sbjct: 300 atcgacatccagttcaagagggttccctgccagtaccctggcctcaccgtcaccttccac 359
Query: 242 gtcgaggaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgac 301
||||| ||||||| || |||| | |||||||| |||||||||| |||||||||
Sbjct: 360 atcgagcgcggctccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgac 419
Query: 302 ggcgacgtcgtccaggtcgacctcatggag 331
||||||||||| ||||||||||||||||||
Sbjct: 420 ggcgacgtcgtgcaggtcgacctcatggag 449
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 440 tccggcaagacgctcgtcgc 459
||||||||||||||||||||
Sbjct: 576 tccggcaagacgctcgtcgc 595
>gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_A01_A002 3', mRNA sequence
Length = 763
Score = 167 bits (84), Expect = 2e-039
Identities = 174/204 (85%)
Strand = Plus / Plus
Query: 128 ttcggcaggctggccaagcccggccgcaacgacgacctgcgccgcgccggcatcatcgac 187
||||||||||||||||||||||||| ||||||| | || |||| | ||||||||||||||
Sbjct: 8 ttcggcaggctggccaagcccggcctcaacgacaagctccgccactccggcatcatcgac 67
Query: 188 atccagttcgccagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgag 247
||| ||||| ||||||| || ||||||||||| || || ||| |||| |||||||| |||
Sbjct: 68 atcgagttcaccagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggag 127
Query: 248 gaaggctccacccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgac 307
|| ||| | || ||||||||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 128 gagtactcgaaccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgac 187
Query: 308 gtcgtccaggtcgacctcatggag 331
|| || ||||| ||||| ||||||
Sbjct: 188 gtggtgcaggtggacctgatggag 211
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| || |||||||||||||| | ||| ||||||||||| ||
Sbjct: 245 tggacgcccatgcgcgagtcctgaggatccatctggcggatggacaccaaccaccgcatg 304
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 305 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 364
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 365 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 418
>gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782207, DNA
sequence
Length = 635
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 296 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 355
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 356 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 415
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 416 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 469
Score = 89.7 bits (45), Expect = 3e-016
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || || ||| |||| |||||||| ||||| ||| |
Sbjct: 130 cagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggaggagtactcgaa 189
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| ||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 190 ccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 249
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 250 ggacctgatggag 262
>gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11134865, DNA
sequence
Length = 589
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 332 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 391
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 392 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 451
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 452 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 505
Score = 89.7 bits (45), Expect = 3e-016
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || || ||| |||| |||||||| ||||| ||| |
Sbjct: 166 cagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggaggagtactcgaa 225
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| ||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 226 ccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 285
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 286 ggacctgatggag 298
>gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11134865, DNA
sequence
Length = 589
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 299 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 240
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 239 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 180
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 179 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 126
Score = 89.7 bits (45), Expect = 3e-016
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || || ||| |||| |||||||| ||||| ||| |
Sbjct: 465 cagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggaggagtactcgaa 406
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| ||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 405 ccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 346
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 345 ggacctgatggag 333
>gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f075a01, DNA
sequence
Length = 477
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 414 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 355
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 354 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 295
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 294 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 241
>gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100k14, DNA
sequence
Length = 672
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 186 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 127
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 126 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 67
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 66 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 13
Score = 89.7 bits (45), Expect = 3e-016
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || || ||| |||| |||||||| ||||| ||| |
Sbjct: 352 cagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggaggagtactcgaa 293
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| ||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 292 ccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 233
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 232 ggacctgatggag 220
>gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 98 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 157
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 158 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 217
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 218 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 271
Score = 71.9 bits (36), Expect = 7e-011
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 268 cttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcat 327
|||||| |||||||| ||||||||| |||||||||||||||| || ||||| ||||| ||
Sbjct: 1 cttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgat 60
Query: 328 ggag 331
||||
Sbjct: 61 ggag 64
>gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_28_H10_A007 3', mRNA sequence
Length = 646
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 130 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 189
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 190 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 249
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 250 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 303
Score = 81.8 bits (41), Expect = 7e-014
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 263 gtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgac 322
||||||||||| |||||||| ||||||||| |||||||||||||||| || ||||| |||
Sbjct: 28 gtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggac 87
Query: 323 ctcatggag 331
|| ||||||
Sbjct: 88 ctgatggag 96
>gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_B10_A007 3', mRNA sequence
Length = 656
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 140 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 199
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 200 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 259
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 260 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 313
Score = 81.8 bits (41), Expect = 7e-014
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 263 gtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgac 322
||||||||||| |||||||| ||||||||| |||||||||||||||| || ||||| |||
Sbjct: 38 gtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggac 97
Query: 323 ctcatggag 331
|| ||||||
Sbjct: 98 ctgatggag 106
>gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_E05_A002 3', mRNA sequence
Length = 775
Score = 155 bits (78), Expect = 6e-036
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 96 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 155
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 156 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 215
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 216 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 269
Score = 67.9 bits (34), Expect = 1e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 270 tcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatgg 329
|||| |||||||| ||||||||| |||||||||||||||| || ||||| ||||| ||||
Sbjct: 1 tcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgatgg 60
Query: 330 ag 331
||
Sbjct: 61 ag 62
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 151 bits (76), Expect = 9e-035
Identities = 190/228 (83%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 97 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 156
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 157 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 216
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 217 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 276
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 277 gagttcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 324
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 340 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 398
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 151 bits (76), Expect = 9e-035
Identities = 190/228 (83%)
Strand = Plus / Minus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 721 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 662
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 661 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactacccgggg 602
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 601 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 542
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 541 gagttcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 494
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 478 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 420
>gb|BF421073.1|BF421073 FM1_6_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 485
Score = 149 bits (75), Expect = 4e-034
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 15 tggacgccgatgcgcgagtcntggggatccatctggcggatggacaccaaccaccgcatg 74
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 75 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 134
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 135 gtcatcccggccaactggaggcccaacaccttctaccgctccttcgtccagtac 188
>gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515236, DNA
sequence
Length = 408
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 187 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 246
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 247 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 306
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||| ||||
Sbjct: 307 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtcccgtac 360
Score = 89.7 bits (45), Expect = 3e-016
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 199 cagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctccac 258
|||||| || ||||||||||| || || ||| |||| |||||||| ||||| ||| |
Sbjct: 21 cagggtgccgtgcgagttccctgggctgaagatcggtttccacgtggaggagtactcgaa 80
Query: 259 ccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggt 318
|| ||||||||||| |||||||| ||||||||| |||||||||||||||| || |||||
Sbjct: 81 ccccgtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggt 140
Query: 319 cgacctcatggag 331
||||| ||||||
Sbjct: 141 ggacctgatggag 153
>gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 417
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 155 tggacgccgatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 214
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 215 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 274
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 275 gtcatcccggccaactggaggcccaacaccttctaccgctccttcgtccagtac 328
Score = 81.8 bits (41), Expect = 7e-014
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 263 gtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgac 322
||||||||||| |||||||| ||||||||| |||||||||||||||| || ||||| |||
Sbjct: 53 gtctacttcgcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggac 112
Query: 323 ctcatggag 331
|| ||||||
Sbjct: 113 ctgatggag 121
>gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 652
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||| ||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 93 tggacgccgatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 152
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| ||| |||||||||||||||||||| | ||
Sbjct: 153 cagccgcccttctccatccgcatccgcaacgagtccggcaagacgctcgtcgccagaaac 212
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 213 gtcatcccggccaactggaggcccaacaccttctaccgctccttcgtccagtac 266
Score = 65.9 bits (33), Expect = 4e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 275 gtgctggtcgagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||||||| ||||||||| |||||||||||||||| || ||||| ||||| ||||||
Sbjct: 3 gtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggacctgatggag 59
>gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_E10_A007 3', mRNA sequence
Length = 635
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcctg 406
|||||||||||| || |||| ||||||||||||||||| | ||| ||||||||||| ||
Sbjct: 8 tggacgcccatgcgcgagtcctggggatccatctggcggatggacaccaaccaccgcatg 67
Query: 407 cagccacccttctccatccgcacccgcaccgactccggcaagacgctcgtcgcacgcgac 466
||||| |||||||||||||||| ||||| || |||||||||||||||||||| | ||
Sbjct: 68 cagccgcccttctccatccgcatccgcaaagagtccggcaagacgctcgtcgccagaaac 127
Query: 467 gtcatcccactcaactggaggccaaacacattctacagatccatcgtccagtac 520
|||||||| |||||||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 128 gtcatcccggccaactggaggcccaacactttctaccgctccttcgtccagtac 181
>gb|CD227643.1|CD227643 CCC1_52_B10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_B10_A007 5', mRNA sequence
Length = 666
Score = 143 bits (72), Expect = 2e-032
Identities = 107/119 (89%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 540 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 599
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttccc 219
| || |||| | ||||||||||||||||| ||||| ||||||| || |||||||||||
Sbjct: 600 nagctccgccactccggcatcatcgacatcgagttcaccagggtgccgtgcgagttccc 658
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 143 bits (72), Expect = 2e-032
Identities = 189/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 74 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 133
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 134 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 193
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 194 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 253
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 254 gaattcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 301
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 317 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 375
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 143 bits (72), Expect = 2e-032
Identities = 189/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 138 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 197
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 198 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 257
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 258 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 317
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 318 gaattcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 365
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 381 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 439
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 143 bits (72), Expect = 2e-032
Identities = 189/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 268 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 327
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 328 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 387
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 388 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 447
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 448 gaattcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 495
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 511 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 569
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 143 bits (72), Expect = 2e-032
Identities = 189/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 429 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 488
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 489 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 548
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 549 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 608
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 609 gaattcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 656
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 672 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 730
>gb|BF480853.1|BF480853 FM1_14_B05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 457
Score = 139 bits (70), Expect = 3e-031
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 363 agtcatggggatccatctggcgcctcgactccaaccaccgcctgcagccacccttctcca 422
|||| ||||||||||||||||| | ||| ||||||||||| ||||||| ||||||||||
Sbjct: 2 agtcctggggatccatctggcggatggacaccaaccaccgcatgcagccgcccttctcca 61
Query: 423 tccgcacccgcaccgactccggcaagacgctcgtcgcacgcgacgtcatcccactcaact 482
|||||| ||||| ||| |||||||||||||||||||| | |||||||||| |||||
Sbjct: 62 tccgcatccgcaacgagtccggcaagacgctcgtcgccagaaacgtcatcccggccaact 121
Query: 483 ggaggccaaacacattctacagatccatcgtccagtac 520
||||||| ||||| |||||| | ||| |||||||||||
Sbjct: 122 ggaggcccaacaccttctaccgctccttcgtccagtac 159
>gb|CD226700.1|CD226700 CCC1_47_B03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_B03_A007 5', mRNA sequence
Length = 654
Score = 139 bits (70), Expect = 3e-031
Identities = 106/118 (89%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 537 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 596
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcc 218
| || |||| | ||||||||||||||||| ||||| ||||||| || ||||||||||
Sbjct: 597 tagctccgccactccggcatcatcgacatcgagttcaccagggtgccgtgcgagttcc 654
>gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 137 bits (69), Expect = 1e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 7 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 66
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 67 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 126
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 127 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 186
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 187 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 246
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 247 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 306
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 307 ctgcaggcgcccttctc 323
>gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 5', mRNA sequence
Length = 836
Score = 137 bits (69), Expect = 1e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 455 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 514
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 515 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 574
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 575 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 634
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 635 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 694
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 695 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 754
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 755 ctgcaggcgcccttctc 771
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 389 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 436
>gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 3', mRNA sequence
Length = 668
Score = 137 bits (69), Expect = 1e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 31 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 90
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 91 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 150
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 151 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 210
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 211 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 270
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 271 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 330
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 331 ctgcaggcgcccttctc 347
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 137 bits (69), Expect = 1e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 138 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 197
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 198 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 257
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 258 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 317
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 318 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 377
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 378 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 437
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 438 ctgcaggcgcccttctc 454
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 72 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 119
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 137 bits (69), Expect = 1e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 146 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 205
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 206 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 265
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 266 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 325
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 326 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 385
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 386 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 445
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 446 ctgcaggcgcccttctc 462
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 80 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 127
>gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_G11_A002 3', mRNA sequence
Length = 781
Score = 135 bits (68), Expect = 5e-030
Identities = 188/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || || ||| |||||||||||||||||| ||||||
Sbjct: 83 cacttcgacctcagcggcacggcgttgggcgccatggccaagcccggccgcagcgacgag 142
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 143 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 202
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 203 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 262
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | ||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 263 gaattcgaagacggcgacggcgacgtggtgcaggtggacctcatggag 310
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 326 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 384
>gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 5', mRNA sequence
Length = 821
Score = 135 bits (68), Expect = 5e-030
Identities = 188/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 451 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 510
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 511 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 570
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 571 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 630
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||| ||||||||
Sbjct: 631 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggag 678
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 385 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 432
>gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 5', mRNA sequence
Length = 889
Score = 135 bits (68), Expect = 5e-030
Identities = 188/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 454 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 513
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 514 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 573
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 574 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 633
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||| ||||||||
Sbjct: 634 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggag 681
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 388 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 435
>gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 5', mRNA sequence
Length = 736
Score = 135 bits (68), Expect = 5e-030
Identities = 188/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 448 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 507
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 508 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 567
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 568 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 627
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||| ||||||||
Sbjct: 628 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggag 675
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 382 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 429
>gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 5', mRNA sequence
Length = 771
Score = 135 bits (68), Expect = 5e-030
Identities = 188/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 455 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 514
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 515 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 574
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 575 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 634
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||||||||||| || ||||| ||| ||||||||
Sbjct: 635 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggag 682
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 389 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 436
>gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 3', mRNA sequence
Length = 680
Score = 129 bits (65), Expect = 3e-028
Identities = 254/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 56 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 115
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 116 ttccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 175
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 176 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 235
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 236 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 295
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 296 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 355
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 356 ctgcaggcgcccttctc 372
>gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_G04_A002 3', mRNA sequence
Length = 695
Score = 129 bits (65), Expect = 3e-028
Identities = 254/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 60 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 119
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 120 ttccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 179
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 180 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 239
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 240 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 299
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 300 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 359
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 360 ctgcaggcgcccttctc 376
>gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_B04_A002 3', mRNA sequence
Length = 681
Score = 129 bits (65), Expect = 3e-028
Identities = 254/317 (80%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 43 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 102
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| |||||||||||| |||||||||||| || || |||||| | | ||| ||
Sbjct: 103 ctccgccacgccggcatcatagacatccagttcaagagagtgccctgcaactacccgggg 162
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 163 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 222
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggagaagcgcgcccgc 343
|||| ||| |||||||||||||||| || ||||| ||| |||||||| | || ||
Sbjct: 223 gagttcgaagacggcgacggcgacgtggtgcaggtggacatcatggaggccaactccggc 282
Query: 344 cgctggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgc 403
||||||||| ||| || |||| ||||||||||||||| | || ||| ||||||| |
Sbjct: 283 tactggacgccgatgcgcgagtcctggggatccatctggaggctggacgccaaccatagg 342
Query: 404 ctgcagccacccttctc 420
|||||| | ||||||||
Sbjct: 343 ctgcaggcgcccttctc 359
>gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_67_D03_A002 5', mRNA sequence
Length = 750
Score = 127 bits (64), Expect = 1e-027
Identities = 187/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||| ||||||
Sbjct: 442 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgag 501
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| ||||| |||||| | | ||| ||
Sbjct: 502 ctccgccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccggg 561
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||||| || ||||||||||| ||||| |||
Sbjct: 562 cagaaggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtc 621
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|| | | | |||||||||||||||| || || || ||||||||||||
Sbjct: 622 gaattcaaagacggcgacggcgacgtggtgcatgtggacctcatggag 669
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 685 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 743
>gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 5', mRNA sequence
Length = 743
Score = 127 bits (64), Expect = 1e-027
Identities = 187/228 (82%)
Strand = Plus / Plus
Query: 104 cacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgacgac 163
|||||||||||||||||||| || |||||| |||||||||||||||||||| ||||
Sbjct: 449 cacttcgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacaacgag 508
Query: 164 ctgcgccgcgccggcatcatcgacatccagttcgccagggtaccctgcgagttcccaggc 223
|| |||| ||||||||||||||||||||||||| || || |||||| | | ||| ||
Sbjct: 509 ctccgccacgccggcatcatcgacatccagttcaagagagtgccctgcaactacccgggg 568
Query: 224 ctcaaggtcggcttccacgtcgaggaaggctccacccaggtctacttcgccgtgctggtc 283
| ||||| |||||||| ||||| ||||| | || |||||||||||| ||||| |||
Sbjct: 569 cagaaggtgacgttccacgtggaggagggctcgaacccggtctacttcgcggtgctcgtc 628
Query: 284 gagtacgagaacggcgacggcgacgtcgtccaggtcgacctcatggag 331
|||| ||| |||||||| ||||||| || ||||| ||| ||||||||
Sbjct: 629 gagttcgaagacggcgactgcgacgtggtgcaggtggacatcatggag 676
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 35 gcctgctccggccgcaccgagaccgtcgtcatcaccgacatgaactac 82
|||||||||||| | ||||||| || ||||||| ||||||||||||
Sbjct: 383 gcctgctccggcaaccccgagacggtgatcatcactgacatgaactac 430
>gb|CW389686.1|CW389686 fsbb001f075a01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f075a01, DNA
sequence
Length = 690
Score = 123 bits (62), Expect = 2e-026
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 42 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 101
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagg 202
| || |||| | ||||||||||||||||| ||||| |||||
Sbjct: 102 aagctccgccactccggcatcatcgacatcgagttcaccagg 143
>gb|CW407264.1|CW407264 fsbb001f100k14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100k14, DNA
sequence
Length = 752
Score = 123 bits (62), Expect = 2e-026
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 386 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 445
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagg 202
| || |||| | ||||||||||||||||| ||||| |||||
Sbjct: 446 aagctccgccactccggcatcatcgacatcgagttcaccagg 487
>gb|CW463846.1|CW463846 fsbb001f212l24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f212l24, DNA
sequence
Length = 623
Score = 123 bits (62), Expect = 2e-026
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 101 taccacttcgacctcagcggcaccgccttcggcaggctggccaagcccggccgcaacgac 160
||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 468 taccacttcgacctcagcggcacggcgttcggcaggctggccaagcccggcctcaacgac 409
Query: 161 gacctgcgccgcgccggcatcatcgacatccagttcgccagg 202
| || |||| | ||||||||||||||||| ||||| |||||
Sbjct: 408 aagctccgccactccggcatcatcgacatcgagttcaccagg 367
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 123 bits (62), Expect = 2e-026
Identities = 161/194 (82%)
Strand = Plus / Plus
Query: 138 tggccaagcccggccgcaacgacgacctgcgccgcgccggcatcatcgacatccagttcg 197
|||||||||||||||||| |||||| || |||| |||||||||||||||||||||||||
Sbjct: 15 tggccaagcccggccgcagcgacgagctccgccacgccggcatcatcgacatccagttca 74
Query: 198 ccagggtaccctgcgagttcccaggcctcaaggtcggcttccacgtcgaggaaggctcca 257
||||| |||||| | | ||| || | ||||| |||||||| ||||| |||||||
Sbjct: 75 agagggtgccctgcaactaccccgggcagaaggtgacgttccacgtggaggagggctcca 134
Query: 258 cccaggtctacttcgccgtgctggtcgagtacgagaacggcgacggcgacgtcgtccagg 317
|| ||||||||||| ||||| ||||| | ||| |||||||||||||||| || ||||
Sbjct: 135 accccgtctacttcgcggtgctcgtcgaattcgaagacggcgacggcgacgtggtgcagg 194
Query: 318 tcgacctcatggag 331
| ||||||||||||
Sbjct: 195 tggacctcatggag 208
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 347 tggacgcccatgagccagtcatggggatccatctggcgcctcgactccaaccaccgcct 405
|||||||| ||| || |||| ||||||||||||||| | || |||||| |||||||||
Sbjct: 224 tggacgccgatgcgcgagtcctggggatccatctggaggctggactccggccaccgcct 282
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 203,569
Number of Sequences: 832831
Number of extensions: 203569
Number of successful extensions: 65271
Number of sequences better than 0.5: 355
Number of HSP's better than 0.5 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64050
Number of HSP's gapped (non-prelim): 1130
length of query: 621
length of database: 491,359,669
effective HSP length: 19
effective length of query: 602
effective length of database: 475,535,880
effective search space: 286272599760
effective search space used: 286272599760
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)