BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2763158.2.1
(826 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 339 2e-091
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 339 2e-091
gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1... 323 1e-086
gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassino... 301 5e-080
gb|AW676919.1|AW676919 DG1_2_E11.b1_A002 Dark Grown 1 (DG1)... 289 2e-076
gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1... 287 8e-076
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 283 1e-074
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 280 2e-073
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 274 1e-071
gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1... 254 1e-065
gb|BE356416.1|BE356416 DG1_125_D03.b1_A002 Dark Grown 1 (DG... 252 4e-065
gb|BE125079.1|BE125079 DG1_15_B06.b1_A002 Dark Grown 1 (DG1... 250 2e-064
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 224 1e-056
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 216 2e-054
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 214 1e-053
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 212 4e-053
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 206 2e-051
gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum ... 204 9e-051
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 200 1e-049
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 200 1e-049
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 200 1e-049
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 200 1e-049
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 200 1e-049
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 200 1e-049
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 200 1e-049
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 200 1e-049
gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedl... 200 1e-049
gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seed... 200 1e-049
gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed see... 200 1e-049
gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2... 198 6e-049
gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1... 194 9e-048
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 194 9e-048
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 194 9e-048
gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Me... 194 9e-048
gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) So... 194 9e-048
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 194 9e-048
gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1... 192 4e-047
gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1... 192 4e-047
gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1... 192 4e-047
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 192 4e-047
gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seed... 192 4e-047
gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-tr... 192 4e-047
gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficie... 192 4e-047
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 192 4e-047
gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2)... 190 1e-046
gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2... 190 1e-046
gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Me... 188 6e-046
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 184 9e-045
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 184 9e-045
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 184 9e-045
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 184 9e-045
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 184 9e-045
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 184 9e-045
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 184 9e-045
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 184 9e-045
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 184 9e-045
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 184 9e-045
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 184 9e-045
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 184 9e-045
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 184 9e-045
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 184 9e-045
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 184 9e-045
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 184 9e-045
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 184 9e-045
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 184 9e-045
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 184 9e-045
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 184 9e-045
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 184 9e-045
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 184 9e-045
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 184 9e-045
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 184 9e-045
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 184 9e-045
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 184 9e-045
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 184 9e-045
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 184 9e-045
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 184 9e-045
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 184 9e-045
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 184 9e-045
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 184 9e-045
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 184 9e-045
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 184 9e-045
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 184 9e-045
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 184 9e-045
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 184 9e-045
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 184 9e-045
gb|CX618845.1|CX618845 GABR1_42_B07.b1_A002 GA- or brassino... 184 9e-045
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 184 9e-045
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 184 9e-045
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 184 9e-045
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 184 9e-045
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 184 9e-045
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 184 9e-045
gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1... 182 3e-044
gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Me... 180 1e-043
gb|BF587017.1|BF587017 FM1_32_C04.g1_A003 Floral-Induced Me... 180 1e-043
gb|CN124461.1|CN124461 RHOH1_5_A02.b1_A002 Acid- and alkali... 178 5e-043
gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1... 176 2e-042
gb|CB924788.1|CB924788 ABA1_28_G05.b1_A012 Abscisic acid-tr... 176 2e-042
gb|CB924927.1|CB924927 ABA1_29_G03.b1_A012 Abscisic acid-tr... 176 2e-042
gb|CD206973.1|CD206973 HS1_26_H04.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD208382.1|CD208382 HS1_37_A07.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD209345.1|CD209345 HS1_42_D07.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD210097.1|CD210097 HS1_57_F09.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD210149.1|CD210149 HS1_57_D05.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD210399.1|CD210399 HS1_51_F10.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD211400.1|CD211400 HS1_60_H01.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD213064.1|CD213064 HS1_28_A05.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD213196.1|CD213196 HS1_29_A11.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD213451.1|CD213451 HS1_41_D04.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD214077.1|CD214077 HS1_70_E04.b1_A012 Heat-shocked seed... 176 2e-042
gb|CD230120.1|CD230120 SS1_41_F06.b1_A012 Salt-stressed see... 176 2e-042
gb|CD230588.1|CD230588 SS1_47_A08.b1_A012 Salt-stressed see... 176 2e-042
gb|CD232272.1|CD232272 SS1_39_F07.b1_A012 Salt-stressed see... 176 2e-042
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 176 2e-042
gb|CD235414.1|CD235414 SS1_29_H09.b1_A012 Salt-stressed see... 176 2e-042
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 176 2e-042
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 176 2e-042
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 176 2e-042
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 176 2e-042
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 176 2e-042
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 176 2e-042
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 176 2e-042
gb|CN145798.1|CN145798 WOUND1_35_G12.b1_A002 Wounded leaves... 176 2e-042
gb|CN145904.1|CN145904 WOUND1_36_C07.b1_A002 Wounded leaves... 176 2e-042
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 176 2e-042
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 176 2e-042
gb|CN151687.1|CN151687 WOUND1_77_A09.b1_A002 Wounded leaves... 176 2e-042
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 176 2e-042
gb|CX619661.1|CX619661 GABR1_47_B01.b1_A002 GA- or brassino... 176 2e-042
gb|CX620964.1|CX620964 GABR1_55_D10.b1_A002 GA- or brassino... 176 2e-042
gb|DN552528.1|DN552528 pSHR-RT-A-H1_C03_C331 pSHR Sorghum h... 176 2e-042
gb|DN552694.1|DN552694 pSHR-RT-MR-H1_C05_C331 pSHR Sorghum ... 176 2e-042
gb|DN552712.1|DN552712 pSHR-RT-MR-H1_B06_C383 pSHR Sorghum ... 176 2e-042
gb|CN141820.1|CN141820 WOUND1_2_C04.b1_A002 Wounded leaves ... 174 8e-042
gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassino... 174 8e-042
gb|BG052581.1|BG052581 RHIZ2_25_C09.g1_A003 Rhizome2 (RHIZ2... 172 3e-041
gb|CB924804.1|CB924804 ABA1_28_G12.b1_A012 Abscisic acid-tr... 172 3e-041
gb|CD232396.1|CD232396 SS1_45_D02.b1_A012 Salt-stressed see... 170 1e-040
gb|CD203975.1|CD203975 HS1_3_G04.b1_A012 Heat-shocked seedl... 168 5e-040
gb|CD207069.1|CD207069 HS1_27_D10.b1_A012 Heat-shocked seed... 168 5e-040
gb|CN134551.1|CN134551 OX1_27_C03.b1_A002 Oxidatively-stres... 168 5e-040
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 168 5e-040
gb|CN145862.1|CN145862 WOUND1_35_F12.g1_A002 Wounded leaves... 168 5e-040
gb|CN145942.1|CN145942 WOUND1_36_H04.b1_A002 Wounded leaves... 168 5e-040
gb|CX621923.1|CX621923 GABR1_61_A11.b2_A002 GA- or brassino... 168 5e-040
gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (L... 167 2e-039
gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (L... 167 2e-039
gb|CD205133.1|CD205133 HS1_12_A10.b1_A012 Heat-shocked seed... 167 2e-039
gb|CD231980.1|CD231980 SS1_31_G03.b1_A012 Salt-stressed see... 167 2e-039
gb|BG103225.1|BG103225 RHIZ2_19_G03.g1_A003 Rhizome2 (RHIZ2... 165 8e-039
gb|CD210870.1|CD210870 HS1_66_F09.b1_A012 Heat-shocked seed... 163 3e-038
gb|CB924610.1|CB924610 ABA1_1_C01.b1_A012 Abscisic acid-tre... 161 1e-037
gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficien... 161 1e-037
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 161 1e-037
gb|CN147899.1|CN147899 WOUND1_53_A07.b1_A002 Wounded leaves... 161 1e-037
gb|CB925873.1|CB925873 ABA1_30_D12.b1_A012 Abscisic acid-tr... 159 5e-037
gb|CD204671.1|CD204671 HS1_9_C05.b1_A012 Heat-shocked seedl... 159 5e-037
gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves... 159 5e-037
gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Me... 157 2e-036
gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (L... 155 8e-036
gb|CX615873.1|CX615873 GABR1_24_B10.b1_A002 GA- or brassino... 151 1e-034
gb|CW159675.1|CW159675 104_565_11149482_148_36409_065 Sorgh... 149 5e-034
gb|CW210001.1|CW210001 104_640_11189560_148_36999_060 Sorgh... 149 5e-034
gb|CD212567.1|CD212567 HS1_6_E05.b1_A012 Heat-shocked seedl... 149 5e-034
gb|CD235827.1|CD235827 SS1_24_E03.b1_A012 Salt-stressed see... 149 5e-034
gb|CN143668.1|CN143668 WOUND1_17_D11.g1_A002 Wounded leaves... 149 5e-034
gb|CW267615.1|CW267615 104_738_11400832_148_35298_064 Sorgh... 147 2e-033
gb|CD233774.1|CD233774 SS1_4_B05.b1_A012 Salt-stressed seed... 147 2e-033
gb|CD230338.1|CD230338 SS1_43_H07.b1_A012 Salt-stressed see... 145 7e-033
gb|BF421580.1|BF421580 FM1_9_F03.g1_A003 Floral-Induced Mer... 139 5e-031
gb|BG557199.1|BG557199 EM1_43_H09.g1_A002 Embryo 1 (EM1) So... 139 5e-031
gb|CN148093.1|CN148093 WOUND1_54_D09.b1_A002 Wounded leaves... 137 2e-030
gb|CX620938.1|CX620938 GABR1_55_B01.b1_A002 GA- or brassino... 137 2e-030
gb|BG052590.1|BG052590 RHIZ2_25_E04.g1_A003 Rhizome2 (RHIZ2... 133 3e-029
gb|CN136543.1|CN136543 OX1_43_G11.g1_A002 Oxidatively-stres... 125 7e-027
gb|AI724790.1|AI724790 RHIZ1_9_C08.y2_A001 Rhizome1 (RHIZ1)... 123 3e-026
gb|BI245591.1|BI245591 IP1_67_E07.g1_A002 Immature pannicle... 119 4e-025
gb|CN150572.1|CN150572 WOUND1_70_C10.b1_A002 Wounded leaves... 117 2e-024
gb|CN143277.1|CN143277 WOUND1_15_E07.b1_A002 Wounded leaves... 115 7e-024
gb|CN150415.1|CN150415 WOUND1_69_B07.b1_A002 Wounded leaves... 109 4e-022
gb|BE356472.1|BE356472 DG1_125_D03.g1_A002 Dark Grown 1 (DG... 107 2e-021
gb|BG557200.1|BG557200 EM1_43_H10.g1_A002 Embryo 1 (EM1) So... 107 2e-021
gb|AW286529.2|AW286529 LG1_334_A07.g1_A002 Light Grown 1 (L... 103 3e-020
gb|AW677220.1|AW677220 DG1_6_D11.g1_A002 Dark Grown 1 (DG1)... 103 3e-020
gb|CD208086.1|CD208086 HS1_31_E06.b1_A012 Heat-shocked seed... 101 1e-019
gb|AW744827.1|AW744827 LG1_384_D09.g1_A002 Light Grown 1 (L... 98 2e-018
gb|AW922651.1|AW922651 DG1_20_B09.g1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|AW923628.1|AW923628 DG1_56_E12.g1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|BE359750.1|BE359750 DG1_56_E12.g2_A002 Dark Grown 1 (DG1... 98 2e-018
gb|CD432478.1|CD432478 ETH1_30_D10.b1_A002 Ethylene-treated... 98 2e-018
gb|CD231440.1|CD231440 SS1_16_H09.b1_A012 Salt-stressed see... 96 6e-018
gb|CW210000.1|CW210000 104_640_11189560_116_37000_060 Sorgh... 92 1e-016
gb|BF587941.1|BF587941 FM1_34_G06.g1_A003 Floral-Induced Me... 90 4e-016
gb|BF421234.1|BF421234 FM1_7_B10.g1_A003 Floral-Induced Mer... 88 2e-015
gb|CW081454.1|CW081454 104_419_10941845_116_32296_023 Sorgh... 84 2e-014
gb|CW190500.1|CW190500 104_612_11174536_148_36759_062 Sorgh... 84 2e-014
gb|CW457729.1|CW457729 fsbb001f203k19f0 Sorghum methylation... 84 2e-014
gb|CW457730.1|CW457730 fsbb001f203k19k0 Sorghum methylation... 84 2e-014
gb|CW077452.1|CW077452 104_381_10892527_116_31765_127 Sorgh... 82 9e-014
gb|CW077453.1|CW077453 104_381_10892527_148_31764_127 Sorgh... 82 9e-014
gb|CW112744.1|CW112744 104_486_11105051_116_34545_036 Sorgh... 82 9e-014
gb|CW112745.1|CW112745 104_486_11105051_148_34541_036 Sorgh... 82 9e-014
gb|CW128496.1|CW128496 104_510_11114036_148_34753_078 Sorgh... 82 9e-014
gb|CW164626.1|CW164626 104_572_11152084_148_36463_004 Sorgh... 82 9e-014
gb|AW284341.2|AW284341 LG1_275_C12.g1_A002 Light Grown 1 (L... 82 9e-014
gb|CW172244.1|CW172244 104_583_11156181_116_36533_089 Sorgh... 78 1e-012
gb|CW201096.1|CW201096 104_626_11184386_148_36867_001 Sorgh... 78 1e-012
gb|CW254111.1|CW254111 104_718_11225481_116_35118_045 Sorgh... 78 1e-012
gb|CW036331.1|CW036331 104_267_10503697_115_30375 Sorghum m... 76 6e-012
gb|CW062618.1|CW062618 104_308_10521441_5_30097 Sorghum met... 74 2e-011
gb|CW224102.1|CW224102 104_660_11203270_148_37445_091 Sorgh... 74 2e-011
gb|CW267614.1|CW267614 104_738_11400832_116_35302_064 Sorgh... 74 2e-011
gb|CW274066.1|CW274066 104_746_11404237_116_35362_049 Sorgh... 74 2e-011
gb|BE600202.1|BE600202 PI1_80_E11.b1_A002 Pathogen induced ... 74 2e-011
gb|BF586246.1|BF586246 FM1_27_E10.b1_A003 Floral-Induced Me... 74 2e-011
gb|CD208589.1|CD208589 HS1_38_B10.g1_A012 Heat-shocked seed... 74 2e-011
gb|CD428941.1|CD428941 ETH1_1_F07.g1_A002 Ethylene-treated ... 74 2e-011
gb|CN145790.1|CN145790 WOUND1_35_F12.b1_A002 Wounded leaves... 74 2e-011
gb|CN148176.1|CN148176 WOUND1_54_D09.g1_A002 Wounded leaves... 74 2e-011
gb|CW224101.1|CW224101 104_660_11203270_116_37444_091 Sorgh... 70 4e-010
gb|CW472326.1|CW472326 fsbb001f227d11f0 Sorghum methylation... 70 4e-010
gb|DN552710.1|DN552710 pSHR-RT-MR-H1_A11_C383 pSHR Sorghum ... 70 4e-010
gb|BZ337449.1|BZ337449 ia87h03.g1 WGS-SbicolorF (JM107 adap... 68 1e-009
gb|AW283021.1|AW283021 LG1_301_G01.g1_A002 Light Grown 1 (L... 68 1e-009
gb|AW284398.1|AW284398 LG1_289_B04.g1_A002 Light Grown 1 (L... 68 1e-009
gb|AW282563.2|AW282563 LG1_312_A09.g1_A002 Light Grown 1 (L... 68 1e-009
gb|AW282564.2|AW282564 LG1_312_A08.g1_A002 Light Grown 1 (L... 68 1e-009
gb|CN148726.1|CN148726 WOUND1_58_A03.g1_A002 Wounded leaves... 68 1e-009
gb|DV162745.1|DV162745 P4-F11 Sorghum bicolor greenbug-resp... 68 1e-009
gb|BG050532.1|BG050532 FM1_72_E07.g1_A003 Floral-Induced Me... 66 6e-009
gb|CW190499.1|CW190499 104_612_11174536_116_36760_062 Sorgh... 64 2e-008
gb|BE353123.1|BE353123 DG1_4_B08.g1_A002 Dark Grown 1 (DG1)... 64 2e-008
gb|BG103244.1|BG103244 RHIZ2_20_B09.g1_A003 Rhizome2 (RHIZ2... 64 2e-008
gb|CW172245.1|CW172245 104_583_11156181_148_36534_089 Sorgh... 62 9e-008
gb|CD232926.1|CD232926 SS1_10_A10.g1_A012 Salt-stressed see... 62 9e-008
gb|CD432578.1|CD432578 ETH1_30_D10.g1_A002 Ethylene-treated... 62 9e-008
gb|CF675648.1|CF675648 DHUR Subtractive cDNA library from s... 56 5e-006
gb|BG052717.1|BG052717 RHIZ2_28_H02.g1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|DN552554.1|DN552554 pSHR-RT-A-H1_A06_C383 pSHR Sorghum h... 54 2e-005
gb|DN552711.1|DN552711 pSHR-RT-MR-H1_B03_C383 pSHR Sorghum ... 54 2e-005
gb|CL194711.1|CL194711 104_419_10941845_114_32292_023 Sorgh... 52 8e-005
gb|CW058109.1|CW058109 104_300_10518563_5_30082 Sorghum met... 52 8e-005
gb|BE358178.1|BE358178 DG1_24_A06.g1_A002 Dark Grown 1 (DG1... 50 3e-004
gb|CW058108.1|CW058108 104_300_10518563_1_30028 Sorghum met... 48 0.001
gb|DN552555.1|DN552555 pSHR-RT-A-H1_C10_C383 pSHR Sorghum h... 48 0.001
gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum m... 46 0.005
gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum m... 46 0.005
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 46 0.005
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 46 0.005
gb|BF587020.1|BF587020 FM1_32_C09.g1_A003 Floral-Induced Me... 46 0.005
gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Me... 46 0.005
gb|BF656644.1|BF656644 FM1_52_H05.g1_A003 Floral-Induced Me... 46 0.005
gb|BG049800.1|BG049800 FM1_65_F12.g1_A003 Floral-Induced Me... 46 0.005
gb|BG158629.1|BG158629 RHIZ2_43_A03.g1_A003 Rhizome2 (RHIZ2... 46 0.005
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 46 0.005
gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed see... 46 0.005
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 46 0.005
gb|CW183756.1|CW183756 104_599_11164783_148_36676_020 Sorgh... 44 0.020
gb|CW128495.1|CW128495 104_510_11114036_116_34757_078 Sorgh... 42 0.080
gb|CW164625.1|CW164625 104_572_11152084_116_36464_004 Sorgh... 42 0.080
gb|BI099457.1|BI099457 IP1_42_D07.g1_A002 Immature pannicle... 42 0.080
gb|CB927918.1|CB927918 ABA1_35_G04.b1_A012 Abscisic acid-tr... 42 0.080
gb|CL164057.1|CL164057 104_358_10807639_116_31815_007 Sorgh... 40 0.32
gb|CW118161.1|CW118161 104_494_11108053_116_34619_055 Sorgh... 40 0.32
gb|CW158429.1|CW158429 104_564_11148817_148_36396_011 Sorgh... 40 0.32
gb|CW271759.1|CW271759 104_744_11403162_116_36228_079 Sorgh... 40 0.32
gb|CW271760.1|CW271760 104_744_11403162_148_35353_079 Sorgh... 40 0.32
gb|CW271761.1|CW271761 104_744_11403162_148_36227_079 Sorgh... 40 0.32
gb|CW405135.1|CW405135 fsbb001f097j02k0 Sorghum methylation... 40 0.32
gb|CW475207.1|CW475207 fsbb001f231h07f0 Sorghum methylation... 40 0.32
gb|CW496572.1|CW496572 fsbb001f288o07k0 Sorghum methylation... 40 0.32
gb|BF421624.1|BF421624 FM1_10_D03.g1_A003 Floral-Induced Me... 40 0.32
gb|BF704924.1|BF704924 FM1_46_C11.g2_A003 Floral-Induced Me... 40 0.32
gb|BG053518.1|BG053518 RHIZ2_10_B10.g1_A003 Rhizome2 (RHIZ2... 40 0.32
gb|CB928206.1|CB928206 ABA1_37_G04.b1_A012 Abscisic acid-tr... 40 0.32
gb|CD211280.1|CD211280 HS1_59_D11.b1_A012 Heat-shocked seed... 40 0.32
gb|CN128795.1|CN128795 RHOH1_31_D07.g1_A002 Acid- and alkal... 40 0.32
gb|CN152729.1|CN152729 WOUND1_83_G11.g1_A002 Wounded leaves... 40 0.32
>gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_D08_A002 3', mRNA sequence
Length = 840
Score = 339 bits (171), Expect = 2e-091
Identities = 453/547 (82%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 24 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 83
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 84 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 143
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 144 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 203
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 204 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 263
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 264 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaagggc 323
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||||||| |||||| ||||| ||||||| ||| || ||||| |||||||||||
Sbjct: 324 gatctacccaaaccagttgcgttggaagaccacacaaggctagattacatccagcgccac 383
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
|| || |||||| | |||| |||||||||||| | |||| ||||||||||| |||
Sbjct: 384 ctctcagttcttaaacaatcaatagacttgggagcagacgtgcgcggctacttcgcgtgg 443
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||||||| | ||||||||| || |||| ||||||||||||
Sbjct: 444 tctctgctggacaacttcgaatggtccagcggctacaccgagcgtttcggcatcgtctac 503
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || ||| | |||||||| | ||| ||||||||| ||||||| |||||| | |||
Sbjct: 504 gtcgatcgcgagaatggctgcgagcgcaccatgaagcgatcagccaggtggttgcaggag 563
Query: 579 ttcaatg 585
|||||||
Sbjct: 564 ttcaatg 570
>gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nuclear gene encoding chloroplast
protein, complete cds
Length = 1983
Score = 339 bits (171), Expect = 2e-091
Identities = 453/547 (82%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 1163 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 1222
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1223 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 1282
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 1283 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 1342
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 1343 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 1402
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 1403 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaagggc 1462
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||||||| |||||| ||||| ||||||| ||| || ||||| |||||||||||
Sbjct: 1463 gatctacccaaaccagttgcgttggaagaccacacaaggctagattacatccagcgccac 1522
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
|| || |||||| | |||| |||||||||||| | |||| ||||||||||| |||
Sbjct: 1523 ctctcagttcttaaacaatcaatagacttgggagcagacgtgcgcggctacttcgcgtgg 1582
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||||||| | ||||||||| || |||| ||||||||||||
Sbjct: 1583 tctctgctggacaacttcgaatggtccagcggctacaccgagcgtttcggcatcgtctac 1642
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || ||| | |||||||| | ||| ||||||||| ||||||| |||||| | |||
Sbjct: 1643 gtcgatcgcgagaatggctgcgagcgcaccatgaagcgatcagccaggtggttgcaggag 1702
Query: 579 ttcaatg 585
|||||||
Sbjct: 1703 ttcaatg 1709
>gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 323 bits (163), Expect = 1e-086
Identities = 400/479 (83%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 81 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 140
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 141 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 200
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 201 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 260
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 261 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 320
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 321 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaagggc 380
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||||||| |||||| ||||| ||||||| ||| || ||||| |||||||||||
Sbjct: 381 gatctacccaaaccagttgcgttggaagaccacacaaggctagattacatccagcgccac 440
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
|| || |||||| | |||| |||||||||||| | |||| ||||||||||| |||
Sbjct: 441 ctctcagttcttaaacaatcaatagacttgggagcagacgtgcgcggctacttcgcgtgg 500
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtcta 517
||||| |||||||||||||||||| | ||||||||| || |||| ||||||||||||
Sbjct: 501 tctctgctggacaacttcgaatggtccagcggctacaccgagcgtttcggcatcgtcta 559
>gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_22_F02_A002 3', mRNA sequence
Length = 748
Score = 301 bits (152), Expect = 5e-080
Identities = 416/504 (82%)
Strand = Plus / Plus
Query: 82 taaactattatacctcaaggttctccaaaaacatcgatatctcaccaaactactcgccag 141
||||||| || ||||||| ||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 22 taaactactacacctcaacgttctccaagcacatcgacctctcaccaaacaactcgccag 81
Query: 142 tgctcaacactgacgacgcatatgccagtcaagaaacgaatgggcctgacgggaatccca 201
||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| | |
Sbjct: 82 tgctcaacactgacgacgcctatgccagtcaagaaaccaaagggcctgacgggaatgcta 141
Query: 202 ttggtccttggatggggaattcgtggatctacctatatcctgaaggcctaaaggatctgc 261
|||||||| | || ||| |||||||| | | || ||| |||||||| | ||| | |
Sbjct: 142 ttggtcctcctactggaaatgcgtggatcaatatgtaccctaaaggcctacacgatatcc 201
Query: 262 ttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatgg 321
|||||| |||||||||||| || ||||||||||| || ||||||||||||||||||||||
Sbjct: 202 ttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatgg 261
Query: 322 gtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagtac 381
| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 262 gggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggctag 321
Query: 382 attacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtgc 441
||||| ||||||||||| || || |||||| | |||| |||||||||||| | ||||
Sbjct: 322 attacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtgc 381
Query: 442 agggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaac 501
||||||||||| |||||||| |||||||||| ||||||| | ||||||||| || |
Sbjct: 382 gcggctacttcgcgtggtctctgctggacaacttagaatggtccagcggctacaccgagc 441
Query: 502 gttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtcag 561
||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| ||||
Sbjct: 442 gtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatcag 501
Query: 562 ccaagtggttcaaagagttcaatg 585
||| |||||| | ||||||||||
Sbjct: 502 ccaggtggttgcaggagttcaatg 525
>gb|AW676919.1|AW676919 DG1_2_E11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 289 bits (146), Expect = 2e-076
Identities = 365/438 (83%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 22 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 81
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 82 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 141
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 142 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 201
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 202 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 261
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 262 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaagggc 321
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||||||| |||||| ||||| ||||||| ||| || ||||| |||||||||||
Sbjct: 322 gatctacccaaaccagttgcgttggaagaccacacaaggctagattacatccagcgccac 381
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
|| || |||||| | |||| |||||||||||| | |||| ||||||||||| |||
Sbjct: 382 ctctcagttcttaaacaatcaatagacttgggagcagacgtgcgcggctacttcgcgtgg 441
Query: 459 tctctattggacaacttc 476
||||| |||||||||||
Sbjct: 442 tctctgctggacaacttc 459
>gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 640
Score = 287 bits (145), Expect = 8e-076
Identities = 385/465 (82%)
Strand = Plus / Plus
Query: 121 tctcaccaaactactcgccagtgctcaacactgacgacgcatatgccagtcaagaaacga 180
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 8 tctcaccaaacaactcgccagtgctcaacactgacgacgcctatgccagtcaagaaacca 67
Query: 181 atgggcctgacgggaatcccattggtccttggatggggaattcgtggatctacctatatc 240
| ||||||||||||||| | ||||||||| | || ||| |||||||| | | || |
Sbjct: 68 aagggcctgacgggaatgctattggtcctcctactggaaatgcgtggatcaatatgtacc 127
Query: 241 ctgaaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatct 300
|| |||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || |
Sbjct: 128 ctaaaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgt 187
Query: 301 acatcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgcct 360
|||||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| |
Sbjct: 188 acatcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgt 247
Query: 361 tggatgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaa 420
|||| ||||||| ||| || ||||| ||||||||||| || || |||||| | ||||
Sbjct: 248 tggaagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaa 307
Query: 421 gagacttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaat 480
|||||||||||| | |||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 308 tagacttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaat 367
Query: 481 ggttctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgca 540
||| | ||||||||| || |||| |||||||||||| || || ||| | ||||||||
Sbjct: 368 ggtccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcg 427
Query: 541 aacgctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
| ||| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 428 agcgcaccatgaagcgatcagccaggtggttgcaggagttcaatg 472
>gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_13_C10_A002 3', mRNA sequence
Length = 732
Score = 283 bits (143), Expect = 1e-074
Identities = 382/462 (82%)
Strand = Plus / Plus
Query: 124 caccaaactactcgccagtgctcaacactgacgacgcatatgccagtcaagaaacgaatg 183
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 1 caccaaacaactcgccagtgctcaacactgacgacgcntatgccagtcaagaaaccaaag 60
Query: 184 ggcctgacgggaatcccattggtccttggatggggaattcgtggatctacctatatcctg 243
|||||||||||||| | ||||||||| | || ||| |||||||| | | || |||
Sbjct: 61 ggcctgacgggaatgctattggtcctcctactggaaatgcgtggatcaatatgtacccta 120
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 121 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 180
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 181 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 240
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 241 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 300
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 301 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 360
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 361 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 420
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 421 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 462
>gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 685
Score = 280 bits (141), Expect = 2e-073
Identities = 384/465 (82%)
Strand = Plus / Plus
Query: 121 tctcaccaaactactcgccagtgctcaacactgacgacgcatatgccagtcaagaaacga 180
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 5 tctcaccaaacaactcgccagtgctcaacactgacgacgcctatgccagtcaagaaacca 64
Query: 181 atgggcctgacgggaatcccattggtccttggatggggaattcgtggatctacctatatc 240
| |||| |||||||||| | ||||||||| | || ||| |||||||| | | || |
Sbjct: 65 aagggcttgacgggaatgctattggtcctcctactggaaatgcgtggatcaatatgtacc 124
Query: 241 ctgaaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatct 300
|| |||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || |
Sbjct: 125 ctaaaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgt 184
Query: 301 acatcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgcct 360
|||||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| |
Sbjct: 185 acatcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgt 244
Query: 361 tggatgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaa 420
|||| ||||||| ||| || ||||| ||||||||||| || || |||||| | ||||
Sbjct: 245 tggaagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaa 304
Query: 421 gagacttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaat 480
|||||||||||| | |||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 305 tagacttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaat 364
Query: 481 ggttctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgca 540
||| | ||||||||| || |||| |||||||||||| || || ||| | ||||||||
Sbjct: 365 ggtccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcg 424
Query: 541 aacgctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
| ||| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 425 agcgcaccatgaagcgatcagccaggtggttgcaggagttcaatg 469
>gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_14_E02_A002 3', mRNA sequence
Length = 732
Score = 274 bits (138), Expect = 1e-071
Identities = 381/462 (82%)
Strand = Plus / Plus
Query: 124 caccaaactactcgccagtgctcaacactgacgacgcatatgccagtcaagaaacgaatg 183
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 1 caccaaacaactcgccagtgctcaacactgacgacgcctatgccagtcaagaaaccaaag 60
Query: 184 ggcctgacgggaatcccattggtccttggatggggaattcgtggatctacctatatcctg 243
|||||||||||||| | ||||||||| | || ||| |||||||| | | || ||
Sbjct: 61 ggcctgacgggaatgctattggtcctcctactggaaatgcgtggatcaatatgtactcta 120
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 121 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 180
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 181 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 240
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 241 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 300
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 301 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 360
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 361 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 420
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 421 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 462
>gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 254 bits (128), Expect = 1e-065
Identities = 365/444 (82%)
Strand = Plus / Plus
Query: 142 tgctcaacactgacgacgcatatgccagtcaagaaacgaatgggcctgacgggaatccca 201
||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| | |
Sbjct: 1 tgctcaacactgacgacgcctatgccagtcaagaaaccaaagggcctgacgggaatgcta 60
Query: 202 ttggtccttggatggggaattcgtggatctacctatatcctgaaggcctaaaggatctgc 261
|||||||| | || ||| |||||||| | | || ||| |||||||| | ||| | |
Sbjct: 61 ttggtcctcctactggaaatgcgtggatcaatatgtaccctaaaggcctacacgatatcc 120
Query: 262 ttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatgg 321
|||||| |||||||||||| || ||||||||||| || ||||||||||||||||||||||
Sbjct: 121 ttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatgg 180
Query: 322 gtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagtac 381
| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 181 gggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggctag 240
Query: 382 attacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtgc 441
||||| ||||||||||| || || |||||| | |||| |||||||||||| | ||||
Sbjct: 241 attacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtgc 300
Query: 442 agggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaac 501
||||||||||| |||||||| |||||||||||||||||| | ||||||||| || |
Sbjct: 301 gcggctacttcgcgtggtctctgctggacaacttcgaatggtccagcggctacaccgagc 360
Query: 502 gttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtcag 561
||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| ||||
Sbjct: 361 gtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatcag 420
Query: 562 ccaagtggttcaaagagttcaatg 585
||| |||||| | ||||||||||
Sbjct: 421 ccaggtggttgcaggagttcaatg 444
>gb|BE356416.1|BE356416 DG1_125_D03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 502
Score = 252 bits (127), Expect = 4e-065
Identities = 264/310 (85%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 183 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 242
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 243 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 302
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 303 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 362
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 363 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 422
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 423 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaanggc 482
Query: 339 gatctaccca 348
||||||||||
Sbjct: 483 gatctaccca 492
>gb|BE125079.1|BE125079 DG1_15_B06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 409
Score = 250 bits (126), Expect = 2e-064
Identities = 264/310 (85%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||||||||||||||| ||||| || || ||| | ||| ||||||| || ||||||
Sbjct: 81 aaagagcaagagaagctagttggttcttacgatatgatcgggataaactactacacctca 140
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 141 acgttctccaagcacatcgacctctcaccaaacaactcgccagtgctcaacactgacgac 200
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
|| ||||||||||||||||| || ||||||||||||||| | ||||||||| | ||
Sbjct: 201 gcctatgccagtcaagaaaccaaagggcctgacgggaatgctattggtcctcctactgga 260
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| |||||||| | | || ||| |||||||| | ||| | ||||||| ||||||||||
Sbjct: 261 aatgcgtggatcaatatgtaccctaaaggcctacacgatatccttatgaccatgaagaac 320
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
|| || ||||||||||| || ||||||||||||||||||||||| ||| ||||| | |||
Sbjct: 321 aagtatggaaacccaccaatgtacatcactgagaacgggatgggggacattgacaagggc 380
Query: 339 gatctaccca 348
||||||||||
Sbjct: 381 gatctaccca 390
>gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 681
Score = 224 bits (113), Expect = 1e-056
Identities = 437/545 (80%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
||||||||| |||||||||||||||||||||||||| | ||| | ||||| || |||||
Sbjct: 7 aaagagcaacagaagctagtgggttcctatgacatgatagggatcaactactactcctca 66
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 67 aggttcgccaagcacgttgacatcacagaaaaattctcgccagagctcaacacgcatgac 126
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | |||||| | |||||| |||||||| | ||||||||| | ||
Sbjct: 127 tgctgtgccactgaagaaattacagggcctaacgggaatactattggtcctgctactgga 186
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||| | || ||| |||||||||||||| | |||||||||||||||||
Sbjct: 187 aatgcgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaag 246
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 247 agatacggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggc 306
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 307 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 366
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||
Sbjct: 367 atctcagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatgg 426
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 427 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 486
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 487 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 546
Query: 579 ttcaa 583
|||||
Sbjct: 547 ttcaa 551
>gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_31_E07_A002 3', mRNA sequence
Length = 707
Score = 216 bits (109), Expect = 2e-054
Identities = 436/545 (80%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
||||||||| |||||||||||||||||||||||||| ||||| | ||||| || |||||
Sbjct: 5 aaagagcaacagaagctagtgggttcctatgacatgatggggatcaactactactcctca 64
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 65 aggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaacacgcatgac 124
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | ||||||| | |||||| |||| ||| | ||||||||| | ||
Sbjct: 125 tgctgtgccactgaagaaactacagggcctaacggcaatactattggtcctgctactgga 184
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||| | || ||| |||||||||||||| | |||||||||| ||||||
Sbjct: 185 aatgcgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcacgaagaag 244
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||
Sbjct: 245 agatacggaaatccaccggtctacatcactgaaaacgggatgggggacattgacaatggc 304
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 305 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 364
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||| || |||| ||| | |||||||| |||| ||| ||||| | |||
Sbjct: 365 atctcagtccttaaagattcaatagattccggagcgaacgtgcgtggccacttcacatgg 424
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 425 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 484
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 485 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 544
Query: 579 ttcaa 583
|||||
Sbjct: 545 ttcaa 549
>gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 686
Score = 214 bits (108), Expect = 1e-053
Identities = 432/540 (80%)
Strand = Plus / Plus
Query: 44 gcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctcaaggtt 103
|||| |||||||||||||||||||||||||| | ||| | ||||| || ||||||||||
Sbjct: 1 gcaacagaagctagtgggttcctatgacatgatagggatcaactactactcctcaaggtt 60
Query: 104 ctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgacgcata 163
| |||| || | || ||| || ||| | |||||||| ||||||||| | ||| |
Sbjct: 61 cgccaagcacgttgacatcacagaaaaattctcgccagagctcaacacgcatgactgctg 120
Query: 164 tgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatggggaattc 223
||||| | |||||| | |||||| |||||||| | ||||||||| | || ||| |
Sbjct: 121 tgccactgaagaaattacagggcctaacgggaatactattggtcctgctactggaaatgc 180
Query: 224 gtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaata 283
|||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | |||
Sbjct: 181 gtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagata 240
Query: 284 cggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatct 343
|||||| ||||| ||||||||||||| ||||||||||| || ||||| ||||||||||
Sbjct: 241 cggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatct 300
Query: 344 acccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcgc 403
| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||||| |
Sbjct: 301 atccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatctc 360
Query: 404 aactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctct 463
| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | ||||||||
Sbjct: 361 agttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctct 420
Query: 464 attggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttga 523
|||||||||||||| |||| |||||||| || |||| |||||||||||| || ||
Sbjct: 421 gttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcga 480
Query: 524 ccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttcaa 583
|| | |||||||||| ||| | ||||||||||||| | |||| | |||||||||||
Sbjct: 481 tcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttcaa 540
>gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_F11_A002 3', mRNA sequence
Length = 790
Score = 212 bits (107), Expect = 4e-053
Identities = 443/555 (79%)
Strand = Plus / Plus
Query: 29 cttcactgacaaagagcaagagaagctagtgggttcctatgacatgttggggttaaacta 88
|||||| || ||||||||| |||||||||||||||||||||||||| | ||| | |||||
Sbjct: 49 cttcacagaaaaagagcaacagaagctagtgggttcctatgacatgatagggatcaacta 108
Query: 89 ttatacctcaaggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaa 148
|| ||||||||||| |||| || | || ||| || ||| | |||||||| ||||||
Sbjct: 109 ctactcctcaaggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaa 168
Query: 149 cactgacgacgcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtcc 208
||| | ||| | ||||| | ||||||| | |||||| |||| ||| | ||||||||
Sbjct: 169 cacgcatgactgctgtgccactgaagaaactacagggcctaacggcaatactattggtcc 228
Query: 209 ttggatggggaattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgat 268
| | || ||| ||||| ||||| | || ||| |||||||||||||| | ||||||||
Sbjct: 229 tgctactggaaatgcgtgggtctacatgtaccctaaaggcctaaaggatatccttatgat 288
Query: 269 catgaagaacaaatacggaaacccacccatctacatcactgagaacgggatgggtgacgt 328
|| |||||| | ||||||||| ||||| ||||||||||||| ||||||||||| ||| |
Sbjct: 289 cacgaagaagagatacggaaatccaccggtctacatcactgaaaacgggatgggggacat 348
Query: 329 tgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagtacattacct 388
|||| ||||||||||| ||||||||| ||| ||||| ||||||| ||| || |||||||
Sbjct: 349 tgacaatggcgatctatccatggaagctgcgttggacgaccacataaggctagattacct 408
Query: 389 ccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggcta 448
|||||||||||| || ||||| || |||| ||| | |||||||| |||| ||| |
Sbjct: 409 tcagcgccacatctcagtccttaaagattcaatagattccggagcgaacgtgcgtggcca 468
Query: 449 cttcgcttggtctctattggacaacttcgaatggttctccggctacacggaacgttacgg 508
|||| | |||||||| |||||||||||||| |||| |||||||| || |||| |||
Sbjct: 469 cttcacatggtctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcgg 528
Query: 509 catcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtg 568
||||||||| || || || | |||||||||| ||| | ||||||||||||| | |||
Sbjct: 529 catcgtctacgtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtg 588
Query: 569 gttcaaagagttcaa 583
| | |||||||||||
Sbjct: 589 gctgaaagagttcaa 603
>gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 678
Score = 206 bits (104), Expect = 2e-051
Identities = 425/532 (79%)
Strand = Plus / Plus
Query: 52 agctagtgggttcctatgacatgttggggttaaactattatacctcaaggttctccaaaa 111
||||||||||||||||||||||| | ||| | ||||| || ||||||||||| ||||
Sbjct: 1 agctagtgggttcctatgacatgatagggatcaactactactcctcaaggttcgccaagc 60
Query: 112 acatcgatatctcaccaaactactcgccagtgctcaacactgacgacgcatatgccagtc 171
|| | || ||| || ||| | |||||||| ||||||||| | ||| | ||||| |
Sbjct: 61 acgttgacatcacagaaaaattctcgccagagctcaacacgcatgactgctgtgccactg 120
Query: 172 aagaaacgaatgggcctgacgggaatcccattggtccttggatggggaattcgtggatct 231
|||||| | |||||| |||||||| | ||||||||| | || ||| ||||| |||
Sbjct: 121 aagaaattacagggcctaacgggaatactattggtcctgctactggaaatgcgtgggtct 180
Query: 232 acctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacc 291
|| | || ||| |||||||||||||| | ||||||||||||||||| | ||||||||| |
Sbjct: 181 acatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagatacggaaatc 240
Query: 292 cacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatctacccatgg 351
|||| ||||||||||||| ||||||||||| || ||||| ||||||||||| ||||||
Sbjct: 241 caccggtctacatcactgaaaacgggatgggggatattgacaatggcgatctatccatgg 300
Query: 352 aagttgccttggatgaccacaaaagagtacattacctccagcgccacatcgcaactctta 411
||| ||| ||||| ||||||| ||| || ||||||| |||||||||||| || |||||
Sbjct: 301 aagctgcgttggacgaccacataaggctagattaccttcagcgccacatctcagttctta 360
Query: 412 aggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctctattggaca 471
|||| |||| ||| | |||||||| |||| ||| ||||| | |||||||| |||||||
Sbjct: 361 aggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctctgttggaca 420
Query: 472 acttcgaatggttctccggctacacggaacgttacggcatcgtctatgttgaccgcaacg 531
||||||| |||| |||||||| || |||| |||||||||||| || || || |
Sbjct: 421 acttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcgatcgtgaga 480
Query: 532 atggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttcaa 583
|||||||||| ||| | ||||||||||||| | |||| | |||||||||||
Sbjct: 481 atggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttcaa 532
>gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 834
Score = 204 bits (103), Expect = 9e-051
Identities = 442/555 (79%)
Strand = Plus / Minus
Query: 29 cttcactgacaaagagcaagagaagctagtgggttcctatgacatgttggggttaaacta 88
|||||| || ||||||||| |||||||||||||||||||||||||| | ||| | |||||
Sbjct: 771 cttcacagaaaaagagcaacagaagctagtgggttcctatgacatgatagggatcaacta 712
Query: 89 ttatacctcaaggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaa 148
|| ||||||||||| |||| || | || ||| || ||| | |||||||| ||||||
Sbjct: 711 ctactcctcaaggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaa 652
Query: 149 cactgacgacgcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtcc 208
||| | ||| | ||||| | |||||| | |||||| |||||||| | ||||||||
Sbjct: 651 cacgcatgactgttgtgccactgaagaaattacagggcctaacgggaatactattggtcc 592
Query: 209 ttggatggggaattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgat 268
| | || ||| ||||| ||||| | || ||| |||||||||||||| | ||||||||
Sbjct: 591 tgctactggaaatgcgtgggtctacatgtaccctaaaggcctaaaggatatccttatgat 532
Query: 269 catgaagaacaaatacggaaacccacccatctacatcactgagaacgggatgggtgacgt 328
||||||||| | ||||||||| ||||| ||||||||||||| |||||||| || || |
Sbjct: 531 catgaagaagagatacggaaatccaccggtctacatcactgaaaacgggataggggatat 472
Query: 329 tgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagtacattacct 388
|||| ||||||||||| ||||||||| ||| ||||| ||||||| ||| || |||||||
Sbjct: 471 tgacaatggcgatctatccatggaagctgcgttggacgaccacataaggctagattacct 412
Query: 389 ccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggcta 448
|||||||||||| || ||||| || |||| ||| | |||||||| |||| ||| |
Sbjct: 411 tcagcgccacatctcagtccttaaagattcaatagattccggagcgaacgtgcgtggcca 352
Query: 449 cttcgcttggtctctattggacaacttcgaatggttctccggctacacggaacgttacgg 508
|||| | ||||| || |||||||||||||| |||| |||||||| || |||| |||
Sbjct: 351 cttcacatggtccctgttggacaacttcgagtggtctagtggctacaccgagcgtttcgg 292
Query: 509 catcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtg 568
||||||||| || || || | |||||||||| ||| ||||||||||||||| | |||
Sbjct: 291 catcgtctacgtcgatcgtgagaatggctgcaagcgcaccatgaagcggtcagcaaggtg 232
Query: 569 gttcaaagagttcaa 583
| | |||||||||||
Sbjct: 231 gctgaaagagttcaa 217
>gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 82 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 141
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 142 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 201
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 202 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 261
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 262 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 321
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 322 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 381
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 382 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 441
Query: 583 a 583
|
Sbjct: 442 a 442
>gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 91 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 150
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 151 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 210
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 211 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 270
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 271 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 330
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 331 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 390
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 391 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 450
Query: 583 a 583
|
Sbjct: 451 a 451
>gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 498
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 8 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 67
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 68 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 127
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 128 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 187
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 188 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 247
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 248 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 307
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 308 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 367
Query: 583 a 583
|
Sbjct: 368 a 368
>gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 654
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 166 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 225
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 226 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 285
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 286 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 345
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 346 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 405
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 406 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 465
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 466 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 525
Query: 583 a 583
|
Sbjct: 526 a 526
>gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 633
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 116 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 175
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 176 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 235
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 236 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 295
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 296 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 355
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 356 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 415
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 416 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 475
Query: 583 a 583
|
Sbjct: 476 a 476
>gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 628
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 120 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 179
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 180 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 239
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 240 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 299
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 300 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 359
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 360 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 419
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 420 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 479
Query: 583 a 583
|
Sbjct: 480 a 480
>gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 692
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 158 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 217
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 218 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 277
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 278 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 337
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 338 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 397
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 398 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 457
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 458 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 517
Query: 583 a 583
|
Sbjct: 518 a 518
>gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 588
Score = 200 bits (101), Expect = 1e-049
Identities = 296/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 86 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 145
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 146 acggaaatccaccggtctacatcactgaaaacgggatgggggatattgacaatggcgatc 205
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 206 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 265
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 266 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 325
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 326 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 385
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 386 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 445
Query: 583 a 583
|
Sbjct: 446 a 446
>gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_8_D11_A012 3', mRNA sequence
Length = 740
Score = 200 bits (101), Expect = 1e-049
Identities = 434/545 (79%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
||||||||| |||||||||||||||||||||||||| | ||| | ||||| || |||||
Sbjct: 5 aaagagcaacagaagctagtgggttcctatgacatgatagggatcaactactactcctca 64
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 65 aggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaacacgcatgac 124
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | |||||| | |||||| |||||||| | ||||||||| | ||
Sbjct: 125 tgctgtgccactgaagaaattacagggcctaacgggaatactattggtcctgctactgga 184
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||||| || ||| |||||||||||||| | |||||||||||||||||
Sbjct: 185 aatgcgtgggtctacctgtaccctaaaggcctaaaggatatccttatgatcatgaagaag 244
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| |||||||| || || ||||| |||||
Sbjct: 245 agatacggaaatccaccggtctacatcactgaaaacgggattggggatattgacaatggc 304
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 305 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 364
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||| || |||| ||| | |||||||| |||| || ||||| | |||
Sbjct: 365 atctcagtccttaaagattcaatagattccggagcgaacgtgcgtggtcacttcacatgg 424
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 425 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 484
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 485 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 544
Query: 579 ttcaa 583
|||||
Sbjct: 545 ttcaa 549
>gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_69_G10_A012 3', mRNA sequence
Length = 701
Score = 200 bits (101), Expect = 1e-049
Identities = 434/545 (79%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
||||||||| |||||||||||||||||||||||||| | ||| | ||||| || |||||
Sbjct: 5 aaagagcaacagaagctagtgggttcctatgacatgatagggatcaactactactcctca 64
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 65 aggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaacacgcatgac 124
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | |||||| | |||||| |||||||| | ||||||||| | ||
Sbjct: 125 tgctgtgccactgaagaaattacagggcctaacgggaatactattggtcctgctactgga 184
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||||| || ||| |||||||||||||| | |||||||||||||||||
Sbjct: 185 aatgcgtgggtctacctgtaccctaaaggcctaaaggatatccttatgatcatgaagaag 244
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| |||||||| || || ||||| |||||
Sbjct: 245 agatacggaaatccaccggtctacatcactgaaaacgggattggggatattgacaatggc 304
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 305 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 364
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||| || |||| ||| | |||||||| |||| || ||||| | |||
Sbjct: 365 atctcagtccttaaagattcaatagattccggagcgaacgtgcgtggtcacttcacatgg 424
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 425 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 484
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 485 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 544
Query: 579 ttcaa 583
|||||
Sbjct: 545 ttcaa 549
>gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_D11_A012 3', mRNA sequence
Length = 734
Score = 200 bits (101), Expect = 1e-049
Identities = 434/545 (79%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
||||||||| |||||||||||||||||||||||||| | ||| | ||||| || |||||
Sbjct: 2 aaagagcaacagaagctagtgggttcctatgacatgatagggatcaactactactcctca 61
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 62 aggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaacacgcatgac 121
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | |||||| | |||||| |||||||| | ||||||||| | ||
Sbjct: 122 tgctgtgccactgaagaaattacagggcctaacgggaatactattggtcctgctactgga 181
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||||| || ||| |||||||||||||| | |||||||||||||||||
Sbjct: 182 aatgcgtgggtctacctgtaccctaaaggcctaaaggatatccttatgatcatgaagaag 241
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| |||||||| || || ||||| |||||
Sbjct: 242 agatacggaaatccaccggtctacatcactgaaaacgggattggggatattgacaatggc 301
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 302 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 361
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||| || |||| ||| | |||||||| |||| || ||||| | |||
Sbjct: 362 atctcagtccttaaagattcaatagattccggagcgaacgtgcgtggtcacttcacatgg 421
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 422 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 481
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 482 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 541
Query: 579 ttcaa 583
|||||
Sbjct: 542 ttcaa 546
>gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 198 bits (100), Expect = 6e-049
Identities = 280/340 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||||||||| | ||||||||||||||||| | ||||||||| ||||| ||||||
Sbjct: 3 aaggcctaaaggatatccttatgatcatgaagaagagatacggaaatccaccggtctaca 62
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||| ||||
Sbjct: 63 tcactgaaaacgggatgggggatattgacaatggcgatctatccatggaagctgcgttgg 122
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||||| |||||||||||| || ||||||||| |||| ||
Sbjct: 123 acgaccacataaggctagattaccttcagcgccacatctcagttcttaaggattcaatag 182
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
| | |||||||| |||| ||| ||||| | |||||||| |||||||||||||| ||||
Sbjct: 183 attccggagcgaacgtgcgtggccacttcacatggtctctgttggacaacttcgagtggt 242
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
|||||||| || |||| |||||||||||| || || || | |||||||||| |
Sbjct: 243 ctagtggctacaccgagcgtttcggcatcgtctacgtcgatcgtgagaatggctgcaagc 302
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaa 583
|| | ||||||||||||| | |||| | |||||||||||
Sbjct: 303 gcaccctgaagcggtcagcaaggtggctgaaagagttcaa 342
>gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 623
Score = 194 bits (98), Expect = 9e-048
Identities = 281/342 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 31 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 90
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 91 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 150
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 151 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 210
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 211 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 270
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 271 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 330
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 331 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 372
>gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 690
Score = 194 bits (98), Expect = 9e-048
Identities = 281/342 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 58 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 117
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 118 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 177
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 178 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 237
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 238 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 297
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 298 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 357
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 358 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 399
>gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 538
Score = 194 bits (98), Expect = 9e-048
Identities = 295/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 13 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 72
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| | ||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 73 acggaaatccaccggtntacatcactgaaaacgggatgggggatattgacaatggcgatc 132
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 133 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 192
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 193 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 252
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 253 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 312
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 313 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 372
Query: 583 a 583
|
Sbjct: 373 a 373
>gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 607
Score = 194 bits (98), Expect = 9e-048
Identities = 297/362 (82%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 94 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 153
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtga-cgttgaccatggcgat 341
||||||| ||||| ||||||||||||| ||||||||||| || | ||||| ||||||||
Sbjct: 154 acggaaatccaccggtctacatcactgaaaacgggatgggggatcattgacaatggcgat 213
Query: 342 ctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatc 401
||| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 214 ctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatc 273
Query: 402 gcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtct 461
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | ||||||
Sbjct: 274 tcagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtct 333
Query: 462 ctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgtt 521
|| |||||||||||||| |||| |||||||| || |||| |||||||||||| ||
Sbjct: 334 ctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtc 393
Query: 522 gaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttc 581
|| || | |||||||||| ||| | ||||||||||||| | |||| | |||||||||
Sbjct: 394 gatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttc 453
Query: 582 aa 583
||
Sbjct: 454 aa 455
>gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 194 bits (98), Expect = 9e-048
Identities = 281/342 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 106 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 165
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 166 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 225
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 226 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 285
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 286 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 345
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 346 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 405
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 406 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 447
Score = 103 bits (52), Expect = 3e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 139 cagtgctcaacactgacgacgcatatgccagtcaagaaacgaatgggcctgacgggaatc 198
|||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 1 cagtgctcaacactgacgacgcntatgccagtcaagaaaccaaagggcctgacgggaatg 60
Query: 199 ccattggtcct 209
| |||||||||
Sbjct: 61 ctattggtcct 71
>gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_18_G09_A002 3', mRNA sequence
Length = 661
Score = 194 bits (98), Expect = 9e-048
Identities = 281/342 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||| | ||| | ||||||| |||||||||||| || ||||||||||| || ||||
Sbjct: 61 aaggcctacacgatatccttatgaccatgaagaacaagtatggaaacccaccaatgtaca 120
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||||||||||||||| ||| ||||| | ||||||||||||| |||||| ||||
Sbjct: 121 tcactgagaacgggatgggggacattgacaagggcgatctacccaaaccagttgcgttgg 180
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||| ||||||||||| || || |||||| | |||| ||
Sbjct: 181 aagaccacacaaggctagattacatccagcgccacctctcagttcttaaacaatcaatag 240
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
|||||||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 241 acttgggagcagacgtgcgcggctacttcgcgtggtctctgctggacaacttcgaatggt 300
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
| ||||||||| || |||| |||||||||||| || || ||| | |||||||| | |
Sbjct: 301 ccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagc 360
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
|| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 361 gcaccatgaagcgatcagccaggtggttgcaggagttcaatg 402
>gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 192 bits (97), Expect = 4e-047
Identities = 268/325 (82%)
Strand = Plus / Plus
Query: 261 cttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatg 320
||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 5 cttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatg 64
Query: 321 ggtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagta 380
|| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 65 ggggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggcta 124
Query: 381 cattacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtg 440
||||| ||||||||||| || || |||||| | |||| |||||||||||| | |||
Sbjct: 125 gattacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtg 184
Query: 441 cagggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaa 500
| ||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||
Sbjct: 185 cgcggctacttcgcgtggtctctgctggacaacttcgaatggtccagcggctacaccgag 244
Query: 501 cgttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtca 560
|||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| |||
Sbjct: 245 cgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatca 304
Query: 561 gccaagtggttcaaagagttcaatg 585
|||| |||||| | ||||||||||
Sbjct: 305 gccaggtggttgcaggagttcaatg 329
>gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 192 bits (97), Expect = 4e-047
Identities = 268/325 (82%)
Strand = Plus / Plus
Query: 261 cttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatg 320
||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 10 cttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatg 69
Query: 321 ggtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagta 380
|| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 70 ggggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggcta 129
Query: 381 cattacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtg 440
||||| ||||||||||| || || |||||| | |||| |||||||||||| | |||
Sbjct: 130 gattacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtg 189
Query: 441 cagggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaa 500
| ||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||
Sbjct: 190 cgcggctacttcgcgtggtctctgctggacaacttcgaatggtccagcggctacaccgag 249
Query: 501 cgttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtca 560
|||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| |||
Sbjct: 250 cgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatca 309
Query: 561 gccaagtggttcaaagagttcaatg 585
|||| |||||| | ||||||||||
Sbjct: 310 gccaggtggttgcaggagttcaatg 334
>gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 192 bits (97), Expect = 4e-047
Identities = 268/325 (82%)
Strand = Plus / Minus
Query: 261 cttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatg 320
||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 556 cttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatg 497
Query: 321 ggtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagta 380
|| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 496 ggggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggcta 437
Query: 381 cattacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtg 440
||||| ||||||||||| || || |||||| | |||| |||||||||||| | |||
Sbjct: 436 gattacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtg 377
Query: 441 cagggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaa 500
| ||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||
Sbjct: 376 cgcggctacttcgcgtggtctctgctggacaacttcgaatggtccagcggctacaccgag 317
Query: 501 cgttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtca 560
|||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| |||
Sbjct: 316 cgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatca 257
Query: 561 gccaagtggttcaaagagttcaatg 585
|||| |||||| | ||||||||||
Sbjct: 256 gccaggtggttgcaggagttcaatg 232
>gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 663
Score = 192 bits (97), Expect = 4e-047
Identities = 295/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 152 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 211
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||| ||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 212 acggaaatccaccggtctgcatcactgaaaacgggatgggggatattgacaatggcgatc 271
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 272 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 331
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||||||| |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 332 cagttcttaaggattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 391
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 392 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 451
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 452 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 511
Query: 583 a 583
|
Sbjct: 512 a 512
>gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_69_A08_A012 3', mRNA sequence
Length = 731
Score = 192 bits (97), Expect = 4e-047
Identities = 433/545 (79%)
Strand = Plus / Plus
Query: 39 aaagagcaagagaagctagtgggttcctatgacatgttggggttaaactattatacctca 98
|||||||| |||||||||||||||||||||||||| | ||| | ||||| || |||||
Sbjct: 10 aaagagcaccagaagctagtgggttcctatgacatgatagggatcaactactactcctca 69
Query: 99 aggttctccaaaaacatcgatatctcaccaaactactcgccagtgctcaacactgacgac 158
|||||| |||| || | || ||| || ||| | |||||||| ||||||||| | |||
Sbjct: 70 aggttcgccaagcacgttgacatcacagaaaatttctcgccagagctcaacacgcatgac 129
Query: 159 gcatatgccagtcaagaaacgaatgggcctgacgggaatcccattggtccttggatgggg 218
| ||||| | |||||| | |||||| |||||||| | ||||||||| | ||
Sbjct: 130 tgctgtgccactgaagaaattacagggcctaacgggaatactattggtcctgctactgga 189
Query: 219 aattcgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaac 278
||| ||||| ||||||| || ||| |||||||||||||| | |||||||||||||||||
Sbjct: 190 aatgcgtgggtctacctgtaccctaaaggcctaaaggatatccttatgatcatgaagaag 249
Query: 279 aaatacggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggc 338
| ||||||||| ||||| ||||||||||||| |||||||| || || ||||| |||||
Sbjct: 250 agatacggaaatccaccggtctacatcactgaaaacgggattggggatattgacaatggc 309
Query: 339 gatctacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccac 398
|||||| ||||||||| ||| ||||| ||||||| ||| || ||||||| |||||||||
Sbjct: 310 gatctatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccac 369
Query: 399 atcgcaactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttgg 458
||| || ||||| || |||| ||| | |||||||| |||| || ||||| | |||
Sbjct: 370 atctcagtccttaaagattcaatagattccggagcgaacgtgcgtggtcacttcacatgg 429
Query: 459 tctctattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctat 518
||||| |||||||||||||| |||| |||||||| || |||| ||||||||||||
Sbjct: 430 tctctgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctac 489
Query: 519 gttgaccgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagag 578
|| || || | |||||||||| ||| | ||||||||||||| | |||| | ||||||
Sbjct: 490 gtcgatcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagag 549
Query: 579 ttcaa 583
|||||
Sbjct: 550 ttcaa 554
>gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_32_D07_A002 3', mRNA sequence
Length = 597
Score = 192 bits (97), Expect = 4e-047
Identities = 268/325 (82%)
Strand = Plus / Plus
Query: 261 cttatgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatg 320
||||||| |||||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 7 cttatgaccatgaagaacaagtatggaaacccaccaatgtacatcactgagaacgggatg 66
Query: 321 ggtgacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagta 380
|| ||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| ||
Sbjct: 67 ggggacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggcta 126
Query: 381 cattacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtg 440
||||| ||||||||||| || || |||||| | |||| |||||||||||| | |||
Sbjct: 127 gattacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtg 186
Query: 441 cagggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaa 500
| ||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||
Sbjct: 187 cgcggctacttcgcgtggtctctgctggacaacttcgaatggtccagcggctacaccgag 246
Query: 501 cgttacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtca 560
|||| |||||||||||| || || ||| | |||||||| | ||| ||||||||| |||
Sbjct: 247 cgtttcggcatcgtctacgtcgatcgcgagaatggctgcgagcgcaccatgaagcgatca 306
Query: 561 gccaagtggttcaaagagttcaatg 585
|||| |||||| | ||||||||||
Sbjct: 307 gccaggtggttgcaggagttcaatg 331
>gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_25_G09_A002 3', mRNA sequence
Length = 691
Score = 192 bits (97), Expect = 4e-047
Identities = 338/417 (81%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 170 tcaagaaacgaatgggcctgacgggaatcccattggtccttggatggggaattcgtggat 229
||||||||| || ||||||||||||||| | ||||||||| | || ||| |||||||
Sbjct: 1 tcaagaaaccaaagggcctgacgggaatgctattggtcctcctactggaaatgcgtggat 60
Query: 230 ctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaa 289
| | | || ||| |||||||| | ||| | ||||||| |||||||||||| || |||||
Sbjct: 61 caatatgtaccctaaaggcctacacgatatccttatgaccatgaagaacaagtatggaaa 120
Query: 290 cccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatctacccat 349
|||||| || ||||||||||||||||||||||| ||| ||||| | |||||||||||||
Sbjct: 121 cccaccaatgtacatcactgagaacgggatgggggacattgacaagggcgatctacccaa 180
Query: 350 gga-agttgccttggatgaccacaaaagagtacattacctccagcgccacatcgcaactc 408
|||||| ||||| ||||||| ||| || ||||| ||||||||||| || || ||
Sbjct: 181 caccagttgcgttggaagaccacacaaggctagattacatccagcgccacctctcagttc 240
Query: 409 ttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctctattgg 468
|||| | |||| |||||||||||| | |||| ||||||||||| |||||||| |||
Sbjct: 241 ttaaacaatcaatagacttgggagcagacgtgcgcggctacttcgcgtggtctctgctgg 300
Query: 469 acaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttgaccgca 528
||||||||||||||| | ||||||||| || |||| |||||||||||| || || |||
Sbjct: 301 acaacttcgaatggtccagcggctacaccgagcgtttcggcatcgtctacgtcgatcgcg 360
Query: 529 acgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttcaatg 585
| |||||||| | ||| ||||||||| ||||||| |||||| | ||||||||||
Sbjct: 361 agaatggctgcgagcgcaccatgaagcgatcagccaggtggttgcaggagttcaatg 417
>gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-glucosidase dhurrinase-2 mRNA,
complete cds
Length = 1935
Score = 192 bits (97), Expect = 4e-047
Identities = 295/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | ||||||||||||||||| | ||
Sbjct: 1320 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcatgaagaagagat 1379
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 1380 acggaaatccaccggtctacatcactgaaaacgggatgggggacattgacaatggcgatc 1439
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 1440 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 1499
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||| || |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 1500 cagtccttaaagattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 1559
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 1560 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 1619
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 1620 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 1679
Query: 583 a 583
|
Sbjct: 1680 a 1680
Score = 73.8 bits (37), Expect = 2e-011
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 29 cttcactgacaaagagcaagagaagctagtgggttcctatgacatgttggggttaaacta 88
|||||| || ||||||||| |||||||||||||||||||||||||| | ||| | |||||
Sbjct: 1126 cttcacagaaaaagagcaacagaagctagtgggttcctatgacatgatagggatcaacta 1185
Query: 89 ttatacctcaaggttctccaa 109
|| ||||||||||| ||||
Sbjct: 1186 ctactcctcaaggttcgccaa 1206
>gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 525
Score = 190 bits (96), Expect = 1e-046
Identities = 279/340 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||||||||| | ||||||||||||||||| | ||||||||| ||||| ||||||
Sbjct: 9 aaggcctaaaggatatccttatgatcatgaagaagagatacggaaatccaccggtctaca 68
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||| ||||
Sbjct: 69 tcactgaaaacgggatgggggatattgacaatggcgatctatccatggaagctgcgttgg 128
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||||| |||||||||||| || | ||||||| |||| ||
Sbjct: 129 acgaccacataaggctagattaccttcagcgccacatctcagtttttaaggattcaatag 188
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
| | |||||||| |||| ||| ||||| | |||||||| |||||||||||||| ||||
Sbjct: 189 attccggagcgaacgtgcgtggccacttcacatggtctctgttggacaacttcgagtggt 248
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
|||||||| || |||| |||||||||||| || || || | |||||||||| |
Sbjct: 249 ctagtggctacaccgagcgtttcggcatcgtctacgtcgatcgtgagaatggctgcaagc 308
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaa 583
|| | ||||||||||||| | |||| | |||||||||||
Sbjct: 309 gcaccctgaagcggtcagcaaggtggctgaaagagttcaa 348
>gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 520
Score = 190 bits (96), Expect = 1e-046
Identities = 279/340 (82%)
Strand = Plus / Plus
Query: 244 aaggcctaaaggatctgcttatgatcatgaagaacaaatacggaaacccacccatctaca 303
|||||||||||||| | ||||||||||||||||| | ||||||||| ||||| | ||||
Sbjct: 11 aaggcctaaaggatatccttatgatcatgaagaagagatacggaaatccaccggtttaca 70
Query: 304 tcactgagaacgggatgggtgacgttgaccatggcgatctacccatggaagttgccttgg 363
||||||| ||||||||||| || ||||| ||||||||||| ||||||||| ||| ||||
Sbjct: 71 tcactgaaaacgggatgggggatattgacaatggcgatctatccatggaagctgcgttgg 130
Query: 364 atgaccacaaaagagtacattacctccagcgccacatcgcaactcttaaggagtcaagag 423
| ||||||| ||| || ||||||| |||||||||||| || ||||||||| |||| ||
Sbjct: 131 acgaccacataaggctagattaccttcagcgccacatctcagttcttaaggattcaatag 190
Query: 424 acttgggagcgaatgtgcagggctacttcgcttggtctctattggacaacttcgaatggt 483
| | |||||||| |||| ||| ||||| | |||||||| |||||||||||||| ||||
Sbjct: 191 attccggagcgaacgtgcgtggccacttcacatggtctctgttggacaacttcgagtggt 250
Query: 484 tctccggctacacggaacgttacggcatcgtctatgttgaccgcaacgatggctgcaaac 543
|||||||| || |||| |||||||||||| || || || | |||||||||| |
Sbjct: 251 ctagtggctacaccgagcgtttcggcatcgtctacgtcgatcgtgagaatggctgcaagc 310
Query: 544 gctacatgaagcggtcagccaagtggttcaaagagttcaa 583
|| | ||||||||||||| | |||| | |||||||||||
Sbjct: 311 gcaccctgaagcggtcagcaaggtggctgaaagagttcaa 350
>gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 590
Score = 188 bits (95), Expect = 6e-046
Identities = 265/322 (82%)
Strand = Plus / Plus
Query: 264 atgatcatgaagaacaaatacggaaacccacccatctacatcactgagaacgggatgggt 323
|||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct: 1 atgaccatgaagaacaagtatggaaacccacccatgtacatcactgagaacgggatgggg 60
Query: 324 gacgttgaccatggcgatctacccatggaagttgccttggatgaccacaaaagagtacat 383
||| ||||| | ||||||||||||| |||||| ||||| ||||||| ||| || ||
Sbjct: 61 gacattgacaagggcgatctacccaaaccagttgcgttggaagaccacacaaggntagat 120
Query: 384 tacctccagcgccacatcgcaactcttaaggagtcaagagacttgggagcgaatgtgcag 443
||| ||||||||||| || || |||||| | |||| |||||||||||| | ||||
Sbjct: 121 tacatccagcgccacctctcagttcttaaacaatcaatagacttgggagcagacgtgcgc 180
Query: 444 ggctacttcgcttggtctctattggacaacttcgaatggttctccggctacacggaacgt 503
|||||||||||||||||||| |||||||||||||||||| | ||| ||||| || |||
Sbjct: 181 ggctacttcgcttggtctctgctggacaacttcgaatggtccagcggttacaccgagcgt 240
Query: 504 tacggcatcgtctatgttgaccgcaacgatggctgcaaacgctacatgaagcggtcagcc 563
| |||||||||||| | || ||| | |||||||| | ||| ||||||||| ||||||
Sbjct: 241 ttcggcatcgtctacatcgatcgcgagaatggctgcgagcgcaccatgaagcgatcagcc 300
Query: 564 aagtggttcaaagagttcaatg 585
| |||||| | ||||||||||
Sbjct: 301 aggtggttgcaggagttcaatg 322
>gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 628
Score = 184 bits (93), Expect = 9e-045
Identities = 294/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | |||||||||| |||||| | ||
Sbjct: 91 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcacgaagaagagat 150
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 151 acggaaatccaccggtctacatcactgaaaacgggatgggggacattgacaatggcgatc 210
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 211 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 270
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||| || |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 271 cagtccttaaagattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 330
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 331 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 390
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 391 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 450
Query: 583 a 583
|
Sbjct: 451 a 451
>gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 656
Score = 184 bits (93), Expect = 9e-045
Identities = 294/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | |||||||||| |||||| | ||
Sbjct: 161 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcacgaagaagagat 220
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 221 acggaaatccaccggtctacatcactgaaaacgggatgggggacattgacaatggcgatc 280
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 281 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 340
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||| || |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 341 cagtccttaaagattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 400
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 401 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 460
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 461 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 520
Query: 583 a 583
|
Sbjct: 521 a 521
>gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 184 bits (93), Expect = 9e-045
Identities = 294/361 (81%)
Strand = Plus / Plus
Query: 223 cgtggatctacctatatcctgaaggcctaaaggatctgcttatgatcatgaagaacaaat 282
||||| ||||| | || ||| |||||||||||||| | |||||||||| |||||| | ||
Sbjct: 166 cgtgggtctacatgtaccctaaaggcctaaaggatatccttatgatcacgaagaagagat 225
Query: 283 acggaaacccacccatctacatcactgagaacgggatgggtgacgttgaccatggcgatc 342
||||||| ||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 226 acggaaatccaccggtctacatcactgaaaacgggatgggggacattgacaatggcgatc 285
Query: 343 tacccatggaagttgccttggatgaccacaaaagagtacattacctccagcgccacatcg 402
|| ||||||||| ||| ||||| ||||||| ||| || ||||||| ||||||||||||
Sbjct: 286 tatccatggaagctgcgttggacgaccacataaggctagattaccttcagcgccacatct 345
Query: 403 caactcttaaggagtcaagagacttgggagcgaatgtgcagggctacttcgcttggtctc 462
|| ||||| || |||| ||| | |||||||| |||| ||| ||||| | |||||||
Sbjct: 346 cagtccttaaagattcaatagattccggagcgaacgtgcgtggccacttcacatggtctc 405
Query: 463 tattggacaacttcgaatggttctccggctacacggaacgttacggcatcgtctatgttg 522
| |||||||||||||| |||| |||||||| || |||| |||||||||||| || |
Sbjct: 406 tgttggacaacttcgagtggtctagtggctacaccgagcgtttcggcatcgtctacgtcg 465
Query: 523 accgcaacgatggctgcaaacgctacatgaagcggtcagccaagtggttcaaagagttca 582
| || | |||||||||| ||| | ||||||||||||| | |||| | ||||||||||
Sbjct: 466 atcgtgagaatggctgcaagcgcaccctgaagcggtcagcaaggtggctgaaagagttca 525
Query: 583 a 583
|
Sbjct: 526 a 526
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 178,504
Number of Sequences: 832831
Number of extensions: 178504
Number of successful extensions: 48766
Number of sequences better than 0.5: 278
Number of HSP's better than 0.5 without gapping: 276
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 47538
Number of HSP's gapped (non-prelim): 764
length of query: 826
length of database: 491,359,669
effective HSP length: 20
effective length of query: 806
effective length of database: 474,703,049
effective search space: 382610657494
effective search space used: 382610657494
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)