BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750463.2.1
(678 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorgh... 537 e-151
gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/c... 496 e-138
gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1... 474 e-132
gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum m... 472 e-131
gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1... 464 e-129
gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2... 450 e-125
gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2... 436 e-120
gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG... 420 e-116
gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 ... 420 e-116
gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG... 402 e-110
gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkal... 402 e-110
gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (... 396 e-108
gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/c... 392 e-107
gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG... 387 e-105
gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-defic... 387 e-105
gb|BE363097.1|BE363097 DG1_9_H02.b1_A002 Dark Grown 1 (DG1)... 385 e-105
gb|BE355421.1|BE355421 DG1_114_G02.b2_A002 Dark Grown 1 (DG... 343 1e-092
gb|BE354986.1|BE354986 DG1_10_F05.b1_A002 Dark Grown 1 (DG1... 339 2e-091
gb|BE356455.1|BE356455 DG1_125_D07.b1_A002 Dark Grown 1 (DG... 339 2e-091
gb|BE362201.1|BE362201 DG1_85_C05.b1_A002 Dark Grown 1 (DG1... 329 2e-088
gb|BG559301.1|BG559301 RHIZ2_53_B08.b1_A003 Rhizome2 (RHIZ2... 315 3e-084
gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2... 309 2e-082
gb|BG649723.1|BG649723 RHIZ2_82_G10.b1_A003 Rhizome2 (RHIZ2... 293 1e-077
gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seed... 291 4e-077
gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves... 291 4e-077
gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorgh... 289 2e-076
gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seed... 274 1e-071
gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorgh... 262 4e-068
gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stres... 262 4e-068
gb|BF704669.1|BF704669 FM1_50_A06.b1_A003 Floral-Induced Me... 260 1e-067
gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seed... 254 9e-066
gb|BG558372.1|BG558372 RHIZ2_66_E05.b1_A003 Rhizome2 (RHIZ2... 252 4e-065
gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation... 244 9e-063
gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2... 242 4e-062
gb|BG558405.1|BG558405 RHIZ2_67_A09.b1_A003 Rhizome2 (RHIZ2... 234 9e-060
gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1... 226 2e-057
gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle ... 226 2e-057
gb|BG050303.1|BG050303 FM1_53_C07.b1_A003 Floral-Induced Me... 222 3e-056
gb|AW923588.1|AW923588 DG1_56_H08.b1_A002 Dark Grown 1 (DG1... 220 1e-055
gb|BI075904.1|BI075904 IP1_22_G09.b1_A002 Immature pannicle... 218 5e-055
gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves... 206 2e-051
gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassino... 206 2e-051
gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorgh... 198 5e-049
gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation... 198 5e-049
gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (L... 198 5e-049
gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2... 198 5e-049
gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedl... 198 5e-049
gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seed... 198 5e-049
gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seed... 198 5e-049
gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seed... 198 5e-049
gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves... 198 5e-049
gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves... 198 5e-049
gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassino... 198 5e-049
gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassino... 198 5e-049
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 194 7e-048
gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (L... 190 1e-046
gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (L... 190 1e-046
gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (L... 190 1e-046
gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (L... 190 1e-046
gb|BE356684.1|BE356684 DG1_12_C08.b1_A002 Dark Grown 1 (DG1... 190 1e-046
gb|BF656221.1|BF656221 FM1_44_E06.b1_A003 Floral-Induced Me... 186 2e-045
gb|BE367582.1|BE367582 PI1_9_H05.b1_A002 Pathogen induced 1... 182 3e-044
gb|BE356553.1|BE356553 DG1_126_C05.b1_A002 Dark Grown 1 (DG... 172 3e-041
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 157 2e-036
gb|BG053306.1|BG053306 RHIZ2_25_G10.b1_A003 Rhizome2 (RHIZ2... 145 6e-033
gb|BI211382.1|BI211382 IP1_60_A09.b1_A002 Immature pannicle... 137 1e-030
gb|CL157537.1|CL157537 104_345_10783651_116_31478_211 Sorgh... 131 9e-029
gb|CN125727.1|CN125727 RHOH1_12_H07.g1_A002 Acid- and alkal... 127 1e-027
gb|BE367581.1|BE367581 PI1_9_H06.b1_A002 Pathogen induced 1... 117 1e-024
gb|CL177479.1|CL177479 104_384_10893857_116_31916_305 Sorgh... 107 1e-021
gb|CW044997.1|CW044997 104_281_10509293_114_30236 Sorghum m... 107 1e-021
gb|CW370183.1|CW370183 fsbb001f044p12k0 Sorghum methylation... 107 1e-021
gb|CW396733.1|CW396733 fsbb001f085f03f0 Sorghum methylation... 107 1e-021
gb|BE357579.1|BE357579 DG1_21_E10.b1_A002 Dark Grown 1 (DG1... 107 1e-021
gb|BG158909.1|BG158909 RHIZ2_42_C03.b1_A003 Rhizome2 (RHIZ2... 107 1e-021
gb|BE357377.1|BE357377 DG1_15_B01.b2_A002 Dark Grown 1 (DG1... 96 5e-018
gb|BE125160.1|BE125160 DG1_13_H08.b1_A002 Dark Grown 1 (DG1... 94 2e-017
gb|CD204106.1|CD204106 HS1_3_A03.g1_A012 Heat-shocked seedl... 92 8e-017
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 92 8e-017
gb|CW045087.1|CW045087 104_281_10509350_114_30237 Sorghum m... 90 3e-016
gb|CW175933.1|CW175933 104_588_11158217_116_36578_069 Sorgh... 90 3e-016
gb|CW221899.1|CW221899 104_657_11202092_116_37451_078 Sorgh... 90 3e-016
gb|CW360174.1|CW360174 fsbb001f028c08k0 Sorghum methylation... 90 3e-016
gb|CW375801.1|CW375801 fsbb001f053f12f0 Sorghum methylation... 90 3e-016
gb|CW493542.1|CW493542 fsbb001f284f17k0 Sorghum methylation... 90 3e-016
gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG... 90 3e-016
gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1... 90 3e-016
gb|BG487539.1|BG487539 EM1_67_C06.b1_A002 Embryo 1 (EM1) So... 90 3e-016
gb|CW489176.1|CW489176 fsbb001f265p08f0 Sorghum methylation... 88 1e-015
gb|BE362052.1|BE362052 DG1_84_F03.b1_A002 Dark Grown 1 (DG1... 88 1e-015
gb|CD235748.1|CD235748 SS1_37_G03.g1_A012 Salt-stressed see... 88 1e-015
gb|CD235780.1|CD235780 SS1_37_G02.g1_A012 Salt-stressed see... 88 1e-015
gb|BE355170.1|BE355170 DG1_10_F05.g1_A002 Dark Grown 1 (DG1... 86 5e-015
gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorgh... 82 8e-014
gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1)... 82 8e-014
gb|CL154551.1|CL154551 104_339_10781491_116_31372_355 Sorgh... 80 3e-013
gb|CW032387.1|CW032387 104_261_10501349_114_30363 Sorghum m... 80 3e-013
gb|CW171233.1|CW171233 104_581_11155631_116_36521_082 Sorgh... 80 3e-013
gb|CW183379.1|CW183379 104_599_11164586_148_36677_011 Sorgh... 80 3e-013
gb|CW360230.1|CW360230 fsbb001f028d16f0 Sorghum methylation... 80 3e-013
gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation... 80 3e-013
gb|CW465154.1|CW465154 fsbb001f215m11f0 Sorghum methylation... 80 3e-013
gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Me... 80 3e-013
gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/c... 80 3e-013
gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG... 74 2e-011
gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG... 74 2e-011
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 74 2e-011
gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/c... 74 2e-011
gb|CW175934.1|CW175934 104_588_11158217_148_36579_069 Sorgh... 72 7e-011
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 70 3e-010
gb|CW411916.1|CW411916 fsbb001f107e19k0 Sorghum methylation... 70 3e-010
gb|CL165204.1|CL165204 104_360_10808428_116_31819_028 Sorgh... 68 1e-009
gb|CW105399.1|CW105399 104_474_11012877_116_34452_085 Sorgh... 68 1e-009
gb|CW163521.1|CW163521 104_571_11151505_148_36454_011 Sorgh... 68 1e-009
gb|CW169284.1|CW169284 104_579_11154593_116_36499_075 Sorgh... 68 1e-009
gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2... 68 1e-009
gb|CL165468.1|CL165468 104_360_10808639_114_31818_239 Sorgh... 64 2e-008
gb|CL171166.1|CL171166 104_372_10889229_116_31779_285 Sorgh... 64 2e-008
gb|CL171167.1|CL171167 104_372_10889229_148_31778_285 Sorgh... 64 2e-008
gb|CL183819.1|CL183819 104_396_10898428_114_31923_268 Sorgh... 64 2e-008
gb|CW086745.1|CW086745 104_430_10947179_116_32570_034 Sorgh... 64 2e-008
gb|CW138453.1|CW138453 104_528_11134704_116_34891_094 Sorgh... 64 2e-008
gb|CW178657.1|CW178657 104_592_11159684_116_36620_072 Sorgh... 64 2e-008
gb|CW183688.1|CW183688 104_599_11164747_148_36676_070 Sorgh... 64 2e-008
gb|CW207390.1|CW207390 104_636_11188111_148_36969_024 Sorgh... 64 2e-008
gb|CW215159.1|CW215159 104_647_11194395_116_37165_010 Sorgh... 64 2e-008
gb|CW262595.1|CW262595 104_730_11230163_116_35225_044 Sorgh... 64 2e-008
gb|CW262596.1|CW262596 104_730_11230163_148_35221_044 Sorgh... 64 2e-008
gb|CW279650.1|CW279650 104_754_11407191_116_35435_056 Sorgh... 64 2e-008
gb|CW279651.1|CW279651 104_754_11407191_148_35439_056 Sorgh... 64 2e-008
gb|CW369263.1|CW369263 fsbb001f043j14f0 Sorghum methylation... 64 2e-008
gb|CW404597.1|CW404597 fsbb001f096m21k0 Sorghum methylation... 64 2e-008
gb|CW417037.1|CW417037 fsbb001f117n19f0 Sorghum methylation... 64 2e-008
gb|CW486084.1|CW486084 fsbb001f249c15k0 Sorghum methylation... 64 2e-008
gb|AW922665.1|AW922665 DG1_45_C01.b1_A002 Dark Grown 1 (DG1... 64 2e-008
gb|BF586634.1|BF586634 FM1_29_F11.b1_A003 Floral-Induced Me... 64 2e-008
gb|BG102401.1|BG102401 RHIZ2_23_C06.b1_A003 Rhizome2 (RHIZ2... 64 2e-008
gb|BI075202.1|BI075202 IP1_17_D05.b1_A002 Immature pannicle... 64 2e-008
gb|CD208462.1|CD208462 HS1_37_A05.g1_A012 Heat-shocked seed... 64 2e-008
gb|CD211845.1|CD211845 HS1_64_C08.g1_A012 Heat-shocked seed... 64 2e-008
gb|CD213004.1|CD213004 HS1_17_C02.g1_A012 Heat-shocked seed... 64 2e-008
gb|CD224210.1|CD224210 CCC1_32_E03.g1_A007 Callus culture/c... 64 2e-008
gb|CD225014.1|CD225014 CCC1_37_D01.g1_A007 Callus culture/c... 64 2e-008
gb|CD227647.1|CD227647 CCC1_52_D04.g1_A007 Callus culture/c... 64 2e-008
gb|CD229214.1|CD229214 CCC1_13_B02.g1_A007 Callus culture/c... 64 2e-008
gb|CD463605.1|CD463605 ETH1_45_D02.g1_A002 Ethylene-treated... 64 2e-008
gb|CF427438.1|CF427438 PH1_1_H06.g1_A002 Phosphorous-defici... 64 2e-008
gb|CF433664.1|CF433664 NIT1_28_D06.g1_A002 Nitrogen-deficie... 64 2e-008
gb|CF480594.1|CF480594 POL1_66_E08.g1_A002 Pollen Sorghum b... 64 2e-008
gb|CN136100.1|CN136100 OX1_40_F12.g1_A002 Oxidatively-stres... 64 2e-008
gb|CN136666.1|CN136666 OX1_44_D01.g1_A002 Oxidatively-stres... 64 2e-008
gb|CN141940.1|CN141940 WOUND1_2_G05.g1_A002 Wounded leaves ... 64 2e-008
gb|CW053111.1|CW053111 104_293_10515781_114_30184 Sorghum m... 62 7e-008
gb|CW253378.1|CW253378 104_717_11225053_116_35110_063 Sorgh... 62 7e-008
gb|CW281372.1|CW281372 104_757_11408141_116_35463_031 Sorgh... 62 7e-008
gb|CL164386.1|CL164386 104_358_10807871_116_31815_239 Sorgh... 60 3e-007
gb|CW022913.1|CW022913 104_162_10432131_1_30008 Sorghum met... 60 3e-007
gb|BF422186.1|BF422186 FM1_12_H05.b1_A003 Floral-Induced Me... 58 1e-006
gb|BZ779790.1|BZ779790 ii34f04.b1 WGS-SbicolorF (DH5a methy... 56 4e-006
gb|BZ780402.1|BZ780402 ii39f06.g1 WGS-SbicolorF (DH5a methy... 56 4e-006
gb|CW165329.1|CW165329 104_573_11152448_116_36469_022 Sorgh... 56 4e-006
gb|CW229300.1|CW229300 104_670_11207230_148_37261_087 Sorgh... 56 4e-006
gb|CW392542.1|CW392542 fsbb001f079d12f0 Sorghum methylation... 56 4e-006
gb|CW439907.1|CW439907 fsbb001f158e17f0 Sorghum methylation... 56 4e-006
gb|CW469002.1|CW469002 fsbb001f221h22f0 Sorghum methylation... 56 4e-006
gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (L... 56 4e-006
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 56 4e-006
gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1... 56 4e-006
gb|BE918783.1|BE918783 OV1_4_H11.b1_A002 Ovary 1 (OV1) Sorg... 56 4e-006
gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sor... 56 4e-006
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 56 4e-006
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 54 2e-005
gb|CW110080.1|CW110080 104_482_11103487_148_34515_022 Sorgh... 54 2e-005
gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorgh... 54 2e-005
gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorgh... 54 2e-005
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 54 2e-005
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 54 2e-005
gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation... 54 2e-005
gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|BF481712.1|BF481712 FM1_21_D12.b1_A003 Floral-Induced Me... 54 2e-005
gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) So... 54 2e-005
gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|BG947867.1|BG947867 IP1_6_C10.b1_A002 Immature pannicle ... 54 2e-005
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 54 2e-005
gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficien... 54 2e-005
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 54 2e-005
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 54 2e-005
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 54 2e-005
gb|CW075171.1|CW075171 104_355_10806807_114_31832_327 Sorgh... 52 7e-005
gb|CW236276.1|CW236276 104_692_11215531_116_37501_078 Sorgh... 52 7e-005
gb|BI140973.1|BI140973 IP1_41_F02.b1_A002 Immature pannicle... 52 7e-005
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 50 3e-004
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 50 3e-004
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 50 3e-004
gb|CW219580.1|CW219580 104_653_11196859_116_37141_068 Sorgh... 48 0.001
gb|CW448024.1|CW448024 fsbb001f181g24k0 Sorghum methylation... 48 0.001
gb|BZ333054.1|BZ333054 hx32e04.b1 WGS-SbicolorF (JM107 adap... 46 0.004
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 46 0.004
gb|CL183147.1|CL183147 104_395_10897985_116_31918_209 Sorgh... 46 0.004
gb|CW102735.1|CW102735 104_471_11011503_116_34426_062 Sorgh... 46 0.004
gb|CW117366.1|CW117366 104_493_11107618_148_34613_041 Sorgh... 46 0.004
gb|CW128842.1|CW128842 104_510_11114239_116_34758_022 Sorgh... 46 0.004
gb|CW173021.1|CW173021 104_584_11156617_148_36546_007 Sorgh... 46 0.004
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 46 0.004
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 46 0.004
gb|CW305737.1|CW305737 104_791_11466467_148_36273_046 Sorgh... 46 0.004
gb|CW393419.1|CW393419 fsbb001f080h11k0 Sorghum methylation... 46 0.004
gb|CW497689.1|CW497689 fsbb001f290j02k0 Sorghum methylation... 46 0.004
gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1... 46 0.004
gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1... 46 0.004
gb|BG560213.1|BG560213 RHIZ2_73_A07.b1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (L... 46 0.004
gb|CD231870.1|CD231870 SS1_30_G08.g1_A012 Salt-stressed see... 46 0.004
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 46 0.004
gb|CD236653.1|CD236653 SS1_35_H04.g1_A012 Salt-stressed see... 46 0.004
gb|CD429366.1|CD429366 ETH1_4_E12.b1_A002 Ethylene-treated ... 46 0.004
gb|CD429502.1|CD429502 ETH1_4_E12.g1_A002 Ethylene-treated ... 46 0.004
gb|CF427844.1|CF427844 PH1_11_F08.b1_A002 Phosphorous-defic... 46 0.004
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 46 0.004
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 46 0.004
gb|CN151800.1|CN151800 WOUND1_77_E10.g1_A002 Wounded leaves... 46 0.004
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 46 0.004
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 46 0.004
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 46 0.004
gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassino... 46 0.004
gb|CL176800.1|CL176800 104_383_10893372_116_31773_204 Sorgh... 44 0.017
gb|BG047807.1|BG047807 OV1_28_A10.b1_A002 Ovary 1 (OV1) Sor... 44 0.017
gb|CF481541.1|CF481541 POL1_72_C10.g1_A002 Pollen Sorghum b... 44 0.017
gb|CF484528.1|CF484528 POL1_25_H02.g1_A002 Pollen Sorghum b... 44 0.017
gb|CF489818.1|CF489818 POL1_59_G01.g1_A002 Pollen Sorghum b... 44 0.017
gb|CW021182.1|CW021182 104_109_10409396_114_30490 Sorghum m... 42 0.065
gb|CW037357.1|CW037357 104_269_10504294_114_30383 Sorghum m... 42 0.065
gb|CW098307.1|CW098307 104_464_11002934_148_34367_051 Sorgh... 42 0.065
gb|CW142382.1|CW142382 104_533_11136827_116_34936_036 Sorgh... 42 0.065
gb|CW219058.1|CW219058 104_652_11196517_116_37460_049 Sorgh... 42 0.065
gb|CW275098.1|CW275098 104_748_11404780_148_35385_012 Sorgh... 42 0.065
gb|CW323273.1|CW323273 104_817_11476543_148_35960_026 Sorgh... 42 0.065
gb|CW375985.1|CW375985 fsbb001f053k02f0 Sorghum methylation... 42 0.065
gb|CW382993.1|CW382993 fsbb001f065e16f0 Sorghum methylation... 42 0.065
gb|CW391503.1|CW391503 fsbb001f077k17k0 Sorghum methylation... 42 0.065
gb|CW426513.1|CW426513 fsbb001f137p03f0 Sorghum methylation... 42 0.065
gb|CW446813.1|CW446813 fsbb001f179k09f0 Sorghum methylation... 42 0.065
gb|CW497688.1|CW497688 fsbb001f290j02f0 Sorghum methylation... 42 0.065
gb|BE355801.1|BE355801 DG1_11_E05.b1_A002 Dark Grown 1 (DG1... 42 0.065
gb|BG101722.1|BG101722 EM1_5_E02.b1_A002 Embryo 1 (EM1) Sor... 42 0.065
gb|BG463230.1|BG463230 EM1_48_A10.b1_A002 Embryo 1 (EM1) So... 42 0.065
gb|CD431245.1|CD431245 ETH1_7_G12.g1_A002 Ethylene-treated ... 42 0.065
gb|CL164385.1|CL164385 104_358_10807871_114_31814_239 Sorgh... 40 0.26
gb|CW360173.1|CW360173 fsbb001f028c08f0 Sorghum methylation... 40 0.26
gb|CW396734.1|CW396734 fsbb001f085f03k0 Sorghum methylation... 40 0.26
gb|BI076157.1|BI076157 IP1_26_C10.b1_A002 Immature pannicle... 40 0.26
>gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896478, DNA
sequence
Length = 735
Score = 537 bits (271), Expect = e-151
Identities = 436/491 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 227 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 286
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 287 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 346
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 406
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 407 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 466
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 467 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 526
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 527 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 586
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccg 601
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 587 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgtggacggcaccccg 646
Query: 602 gtgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgaggatgcagcccatg 661
| || |||||||||||||| || || |||||||||| ||||||| ||| |||||| |||
Sbjct: 647 atccgcgacttcaagaaccatgaagcccgcggggtggggttcccgcggacgcagccgatg 706
Query: 662 aggctgtacgc 672
||||||||||
Sbjct: 707 cggctgtacgc 717
>gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A05_A007 5', mRNA sequence
Length = 674
Score = 496 bits (250), Expect = e-138
Identities = 404/454 (88%), Gaps = 1/454 (0%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 204 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 263
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 264 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 323
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 383
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 384 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 443
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 444 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 503
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 504 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 563
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcaccccg 601
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 564 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgtggacggcaccccg 623
Query: 602 gtgcgggacttcaagaaccacgaggcgcgcgggg 635
| || |||||||| ||||| ||||| |||||||
Sbjct: 624 atccgcgacttcaa-aaccatgaggcccgcgggg 656
>gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 474 bits (239), Expect = e-132
Identities = 371/415 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 190 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 249
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 250 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 309
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 369
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 370 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 429
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 430 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 489
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 490 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 549
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggca 596
|||||||||||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgtggacggca 604
>gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505213, DNA
sequence
Length = 732
Score = 472 bits (238), Expect = e-131
Identities = 386/434 (88%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 299 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 358
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 359 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 418
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 478
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 479 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 538
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 539 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 598
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 599 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 658
Query: 542 cacacctact-ccatcctgtggaacccgcagcacgtgatcttcgcggtggacggcacccc 600
|||||||||| || | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 659 cacacctactcccgtggtgtggaacccgcagcacgtgatcttcgccgtggacggcacccc 718
Query: 601 ggtgcgggacttca 614
| | || |||||||
Sbjct: 719 gatccgcgacttca 732
>gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 464 bits (234), Expect = e-129
Identities = 366/410 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 195 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 254
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 255 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 314
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 374
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 375 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 434
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 435 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 494
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 495 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 554
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtgga 591
|||||||||||| | |||||||||||||||||||||||||||| |||||
Sbjct: 555 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgtgga 604
>gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 608
Score = 450 bits (227), Expect = e-125
Identities = 368/415 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 194 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 253
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 254 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 313
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 373
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 374 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 433
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 434 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 493
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 494 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 553
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgcggtggacggca 596
|||||||||||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct: 554 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgtggacggca 608
>gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 589
Score = 436 bits (220), Expect = e-120
Identities = 358/404 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 185 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 244
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 245 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 304
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 305 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 364
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 365 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 424
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 425 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 484
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 485 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 544
Query: 542 cacacctactccatcctgtggaacccgcagcacgtgatcttcgc 585
|||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 545 cacacctactccgtggtgtggaacccgcagcacgtgatcttcgc 588
>gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 420 bits (212), Expect = e-116
Identities = 332/372 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 187 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 246
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 247 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 306
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 366
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 367 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 426
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 427 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 486
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 487 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 546
Query: 542 cacacctactcc 553
||||||||||||
Sbjct: 547 cacacctactcc 558
>gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 420 bits (212), Expect = e-116
Identities = 332/372 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 187 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 246
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 247 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 306
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 366
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 367 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 426
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 427 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 486
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccctaccactgccttc 541
|||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 487 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccccaccaaggacttc 546
Query: 542 cacacctactcc 553
||||||||||||
Sbjct: 547 cacacctactcc 558
>gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 402 bits (203), Expect = e-110
Identities = 311/347 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 192 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 251
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 252 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 311
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 371
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 372 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 431
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 432 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 491
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccc 528
|||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 492 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccc 538
>gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_H10_A002 5', mRNA sequence
Length = 551
Score = 402 bits (203), Expect = e-110
Identities = 311/347 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 204 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 263
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 264 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 323
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 383
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 384 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 443
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 444 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 503
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcgaccc 528
|||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 504 ggcggccagggccagcgcgagcagcagttccgcctctggttcgaccc 550
>gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 502
Score = 396 bits (200), Expect = e-108
Identities = 308/344 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 159 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 218
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 219 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 278
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 338
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 339 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 398
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 399 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 458
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcga 525
|||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 459 ggcggccagggccagcgcgagcagcagttccgcctctggttcga 502
>gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_40_G02_A007 5', mRNA sequence
Length = 537
Score = 392 bits (198), Expect = e-107
Identities = 306/342 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | |||||||||||||| |||
Sbjct: 196 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgcggcaaggtggtg 255
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 256 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 315
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 316 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaacccg 375
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 376 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 435
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 436 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 495
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttc 523
|||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 496 ggcggccagggccagcgcgagcagcagttccgcctctggttc 537
>gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 387 bits (195), Expect = e-105
Identities = 303/339 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 188 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 247
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 248 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 307
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 367
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 368 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 427
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 428 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 487
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctgg 520
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 488 ggcggccagggccagcgcgagcagcagttccgcctctgg 526
>gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_16_E07_A002 5', mRNA sequence
Length = 552
Score = 387 bits (195), Expect = e-105
Identities = 306/343 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 210 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 269
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 270 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 329
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 389
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 390 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 449
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 450 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtggtcacc 509
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctggttcg 524
|||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 510 ggcggccagggccagcgcgagcagcagttccgcctctggttcg 552
>gb|BE363097.1|BE363097 DG1_9_H02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 532
Score = 385 bits (194), Expect = e-105
Identities = 302/338 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 195 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 254
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 255 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 314
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 374
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 375 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 434
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 435 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 494
Query: 482 cgcggacagggccagcgggagcagcagttccgcctctg 519
|||| ||||||||||| ||||||||||||||||||||
Sbjct: 495 ggcggccagggccagcgcgagcagcagttccgcctctg 532
>gb|BE355421.1|BE355421 DG1_114_G02.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 501
Score = 343 bits (173), Expect = 1e-092
Identities = 278/313 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 189 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 248
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 249 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 308
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 368
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 369 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 428
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 429 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacc 488
Query: 482 cgcggacagggcc 494
|||| |||||||
Sbjct: 489 ggcggccagggcc 501
>gb|BE354986.1|BE354986 DG1_10_F05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 493
Score = 339 bits (171), Expect = 2e-091
Identities = 267/299 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 194 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 253
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 254 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 313
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 373
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 374 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 433
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcac 480
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 434 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcac 492
>gb|BE356455.1|BE356455 DG1_125_D07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 339 bits (171), Expect = 2e-091
Identities = 267/299 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 173 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 232
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 233 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 292
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 352
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 353 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 412
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcac 480
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 413 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcac 471
>gb|BE362201.1|BE362201 DG1_85_C05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 425
Score = 329 bits (166), Expect = 2e-088
Identities = 277/314 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 110 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 169
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 170 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 229
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 289
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||||| || || ||| | | |||||||||||||||
Sbjct: 290 gccggcaccgtcaccaccttctacctgtactcgcaaggccccacccacgacgagatcgac 349
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacg 481
||| ||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 350 ttcaagttcctcggcaacgtctccggcgagccctacacactgcacaccaacgtgttcacc 409
Query: 482 cgcggacagggcca 495
|||| ||||||||
Sbjct: 410 ggcggccagggcca 423
>gb|BG559301.1|BG559301 RHIZ2_53_B08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 502
Score = 315 bits (159), Expect = 3e-084
Identities = 264/299 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 194 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 253
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 254 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 313
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 373
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 374 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 433
Query: 422 ttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcac 480
||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 434 ttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcac 492
>gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 561
Score = 309 bits (156), Expect = 2e-082
Identities = 237/264 (89%)
Strand = Plus / Plus
Query: 409 cgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacgctgcacac 468
|||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 9 cgacgagatcgacttcgagttcctcggcaacgtctccggcgagccctacacgctgcacac 68
Query: 469 caacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctggttcgaccc 528
|||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 69 caacgtgttcaccggcggccagggccagcgcgagcagcagttccgcctctggttcgaccc 128
Query: 529 taccactgccttccacacctactccatcctgtggaacccgcagcacgtgatcttcgcggt 588
|||| | |||||||||||||||| | |||||||||||||||||||||||||||| ||
Sbjct: 129 caccaaggacttccacacctactccgtggtgtggaacccgcagcacgtgatcttcgccgt 188
Query: 589 ggacggcaccccggtgcgggacttcaagaaccacgaggcgcgcggggtggcgttcccgag 648
||||||||||||| | || |||||||||||||| ||||| |||||||||| ||||||| |
Sbjct: 189 ggacggcaccccgatccgcgacttcaagaaccatgaggcccgcggggtggggttcccgcg 248
Query: 649 gatgcagcccatgaggctgtacgc 672
|| |||||| ||| ||||||||||
Sbjct: 249 gacgcagccgatgcggctgtacgc 272
>gb|BG649723.1|BG649723 RHIZ2_82_G10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 454
Score = 293 bits (148), Expect = 1e-077
Identities = 232/260 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 195 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 254
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 255 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 314
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggcaactcg 374
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 375 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 434
Query: 422 ttcgagttcctgggcaacgt 441
||||||||||| ||||||||
Sbjct: 435 ttcgagttcctcggcaacgt 454
>gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_41_D06_A012 5', mRNA sequence
Length = 685
Score = 291 bits (147), Expect = 4e-077
Identities = 285/331 (86%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| || ||||||||||||| | ||||||||| ||||||
Sbjct: 331 ctgacgctggaccggacctccgggtcggggttccagtccaggcacgagtacctcttcggc 390
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 391 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 450
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 451 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 510
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 511 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 570
Query: 503 cagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcctgtgg 562
|||||||||||||||||||| || || |||| | |||||| |||||||||||||| |||
Sbjct: 571 cagcagttccgcctctggtttgatcccaccaaggacttccatacctactccatcctctgg 630
Query: 563 aacccgcagcacgtgatcttcgcggtggacg 593
||||| ||||||| |||||| ||||||||
Sbjct: 631 aaccccaagcacgtcatcttcatggtggacg 661
>gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_H04_A002 5', mRNA sequence
Length = 793
Score = 291 bits (147), Expect = 4e-077
Identities = 285/331 (86%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 327 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 386
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 387 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 446
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 447 tacctgtcgtcgcagggcaacatccacgatgagatcgacttcgagttcctcggcaacgtc 506
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 507 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 566
Query: 503 cagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcctgtgg 562
|||||||||||||||||||| || || |||| | |||||| |||||||||||||| |||
Sbjct: 567 cagcagttccgcctctggtttgatcccaccaaggacttccatacctactccatcctctgg 626
Query: 563 aacccgcagcacgtgatcttcgcggtggacg 593
||||| ||||||| |||||| ||||||||
Sbjct: 627 aaccccaagcacgtcatcttcatggtggacg 657
>gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943679, DNA
sequence
Length = 636
Score = 289 bits (146), Expect = 2e-076
Identities = 272/314 (86%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 169 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 228
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 229 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 288
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 289 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 348
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 349 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 408
Query: 503 cagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcctgtgg 562
|||||||||||||||||||| || || |||| | |||||| |||||||||||||| |||
Sbjct: 409 cagcagttccgcctctggtttgatcccaccaaggacttccatacctactccatcctctgg 468
Query: 563 aacccgcagcacgt 576
||||| |||||||
Sbjct: 469 aaccccaagcacgt 482
>gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_D02_A012 5', mRNA sequence
Length = 648
Score = 274 bits (138), Expect = 1e-071
Identities = 270/314 (85%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| || ||||||||||||| | ||||||||| ||||||
Sbjct: 331 ctgacgctggaccggacctccgggtcggggttccagtccaggcacgagtacctcttcggc 390
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 391 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 450
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| ||| || || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 451 tacctgtcgtcgcagagcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 510
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 511 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 570
Query: 503 cagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcctgtgg 562
|||||||||||||||||||| || || |||| | |||||| |||||||||||||| |||
Sbjct: 571 cagcagttccgcctctggtttgatcccaccaaggacttccatacctactccatcctctgg 630
Query: 563 aacccgcagcacgt 576
||||| |||||||
Sbjct: 631 aaccccaagcacgt 644
>gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465956, DNA
sequence
Length = 622
Score = 262 bits (132), Expect = 4e-068
Identities = 228/260 (87%)
Strand = Plus / Minus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 276 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 217
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 216 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 157
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 156 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 97
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 96 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 37
Query: 503 cagcagttccgcctctggtt 522
||||||||||||||||||||
Sbjct: 36 cagcagttccgcctctggtt 17
>gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_22_E01_A002 5', mRNA sequence
Length = 705
Score = 262 bits (132), Expect = 4e-068
Identities = 283/332 (85%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgt-tcgg 321
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| | ||||
Sbjct: 187 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctctgtcgg 246
Query: 322 caagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccacctt 381
|||||||||||||||| | |||||||| || |||||||| || ||||| |||||| |||
Sbjct: 247 caagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgccta 306
Query: 382 ctacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgt 441
| |||||||||| |||||| || | ||||| |||||||||||| ||||||| ||||||||
Sbjct: 307 caacctgtcgtcgcagggcaacacccacgatgagatcgacttcaagttcctcggcaacgt 366
Query: 442 gagcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcggga 501
||| ||||||||||||||| |||||||||||||||| | || ||||| ||| ||||
Sbjct: 367 ctccggcgagccctacacgctgtacaccaacgtgttcacccagggccagggacagaggga 426
Query: 502 gcagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcctgtg 561
||||||||||||||||||||| || || |||| | |||||| |||||||||||||| ||
Sbjct: 427 gcagcagttccgcctctggtttgatcccaccaaggacttccatacctactccatcctctg 486
Query: 562 gaacccgcagcacgtgatcttcgcggtggacg 593
|||||| ||||||| |||||| ||||||||
Sbjct: 487 gaaccccaagcacgtcatcttcatggtggacg 518
>gb|BF704669.1|BF704669 FM1_50_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 391
Score = 260 bits (131), Expect = 1e-067
Identities = 221/251 (88%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 140 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 199
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 200 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 259
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 260 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 319
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 320 gccggcaccgtcaccaccttctacctctcctcgcaaggccccacccacgacgagatcgac 379
Query: 422 ttcgagttcct 432
|||||||||||
Sbjct: 380 ttcgagttcct 390
>gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_B07_A012 5', mRNA sequence
Length = 599
Score = 254 bits (128), Expect = 9e-066
Identities = 227/260 (87%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| || ||||||||||||| | ||||||||| ||||||
Sbjct: 331 ctgacgctggaccggacctccgggtcggggttccagtccaggcacgagtacctcttcggc 390
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 391 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 450
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 451 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 510
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggccagcgggag 502
||| |||||||||||||||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 511 tccggcgagccctacacgctgcacaccaacgtgttcacccagggccagggacagagggag 570
Query: 503 cagcagttccgcctctggtt 522
||||||||||||||||||||
Sbjct: 571 cagcagttccgcctctggtt 590
>gb|BG558372.1|BG558372 RHIZ2_66_E05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 443
Score = 252 bits (127), Expect = 4e-065
Identities = 221/251 (88%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 194 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 253
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 254 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 313
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 373
Query: 362 gctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgac 421
|| ||||| ||||||||||||||||| || || || ||| | | |||||||||||||||
Sbjct: 374 gccggcaccgtcaccaccttctacctctcctcgca-ggccccacccacgacgagatcgac 432
Query: 422 ttcgagttcct 432
|||||||||||
Sbjct: 433 ttcgagttcct 443
>gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f104p18, DNA
sequence
Length = 454
Score = 244 bits (123), Expect = 9e-063
Identities = 243/283 (85%)
Strand = Plus / Plus
Query: 294 tccagtccaagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccag 353
||||||||| | ||||||||| ||||| ||||||||||||||| | |||||||| || |
Sbjct: 1 tccagtccaggcacgagtacctcttcggaaagatcgacatgcagctgaagctggtccccg 60
Query: 354 gcaactccgctggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacg 413
||||||| || ||||| |||||| ||| |||||||||||| |||||| || | ||||| |
Sbjct: 61 gcaactcggccggcaccgtcaccgcctactacctgtcgtcgcagggcaacacccacgatg 120
Query: 414 agatcgacttcgagttcctgggcaacgtgagcggggagccctacacgctgcacaccaacg 473
||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct: 121 agatcgacttcgagttcctcggcaacgtctccggcgagccctacacgctgcacaccaacg 180
Query: 474 tgttcacgcgcggacagggccagcgggagcagcagttccgcctctggttcgaccctacca 533
||||||| | || ||||| ||| ||||||||||||||||||||||||| || || ||||
Sbjct: 181 tgttcacccagggccagggacagagggagcagcagttccgcctctggtttgatcccacca 240
Query: 534 ctgccttccacacctactccatcctgtggaacccgcagcacgt 576
| |||||| |||||||||||||| |||||||| |||||||
Sbjct: 241 aggacttccatacctactccatcctctggaaccccaagcacgt 283
>gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 242 bits (122), Expect = 4e-062
Identities = 194/218 (88%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || |||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 317 ctgacgctggaccggacctccggctccgggttccagtccaggcacgagtacctcttcggc 376
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 377 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 436
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | |||||||||||||||||||||||||| ||||||||
Sbjct: 437 tacctgtcgtcgcagggcaacacccacgacgagatcgacttcgagttcctcggcaacgtc 496
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcac 480
||| ||||||||||||||||||||||||||||||||
Sbjct: 497 tccggcgagccctacacgctgcacaccaacgtgttcac 534
>gb|BG558405.1|BG558405 RHIZ2_67_A09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 407
Score = 234 bits (118), Expect = 9e-060
Identities = 184/206 (89%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | || || |||||||| |||
Sbjct: 184 ggcggcaacttctacaaggacacggagatgacctgggggcaaggtcgtggcaaggtggtg 243
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| || ||||||||||| |||||||||
Sbjct: 244 gacggcgggcgcgggctggacctaaccctggacaagacctccggctccggcttccagtcc 303
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactcc 361
||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgcccggcaactcg 363
Query: 362 gctggcacggtcaccaccttctacct 387
|| ||||| |||||||||||||||||
Sbjct: 364 gccggcaccgtcaccaccttctacct 389
>gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 226 bits (114), Expect = 2e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 326 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 385
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 386 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 445
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 446 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 505
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcac 480
||| ||||||||||||||||||||||||||||||||
Sbjct: 506 tccggcgagccctacacgctgcacaccaacgtgttcac 543
>gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 544
Score = 226 bits (114), Expect = 2e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 326 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 385
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| || ||||| |||||| ||| |
Sbjct: 386 aagatcgacatgcagctgaagctggtccccggcaactcggccggcaccgtcaccgcctac 445
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 446 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 505
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcac 480
||| ||||||||||||||||||||||||||||||||
Sbjct: 506 tccggcgagccctacacgctgcacaccaacgtgttcac 543
>gb|BG050303.1|BG050303 FM1_53_C07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 258
Score = 222 bits (112), Expect = 3e-056
Identities = 217/252 (86%)
Strand = Plus / Plus
Query: 254 gggctggacctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtac 313
||||||||||| || |||||| || ||||||||||| || ||||||||| |||||||
Sbjct: 7 gggctggacctaaccctggacaagacctccggctccggctttcagtccaagtccgagtac 66
Query: 314 ctgttcggcaagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtc 373
|| ||||||||||||||||||||||||||||||||||| ||| |||| | ||||| | |
Sbjct: 67 ctcttcggcaagatcgacatgcagatcaagctggtgcccggcgactcggacggcaccgac 126
Query: 374 accaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctg 433
|||||||||||||| || || || ||| | | ||||||||||||||||||||||||||
Sbjct: 127 accaccttctacctctcctcgcaaggccccacccacgacgagatcgacttcgagttcctc 186
Query: 434 ggcaacgtgagcggggagccctacacgctgcacaccaacgtgttcacgcgcggacagggc 493
|||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 187 ggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcaccggcggccagggc 246
Query: 494 cagcgggagcag 505
||||| ||||||
Sbjct: 247 cagcgcgagcag 258
>gb|AW923588.1|AW923588 DG1_56_H08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 364
Score = 220 bits (111), Expect = 1e-055
Identities = 159/175 (90%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaaggtagtg 241
||||||||||||||| ||||||| |||||||||||||| | ||||| |||||||| |||
Sbjct: 190 ggcggcaacttctacaaggacacggagatgacctgggggcaaggccgtggcaaggtggtg 249
Query: 242 gacggcgggcgcgggctggacctgacgctggaccgcacgtccggctccgggttccagtcc 301
||||||||||||||||||||||| || |||||| | || ||||||||||| |||||||||
Sbjct: 250 gacggcgggcgcgggctggacctaaccctggacaggacctccggctccggcttccagtcc 309
Query: 302 aagagcgagtacctgttcggcaagatcgacatgcagatcaagctggtgccaggca 356
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagtccgagtacctcttcggcaagatcgacatgcagatcaagctggtgccaggca 364
>gb|BI075904.1|BI075904 IP1_22_G09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 540
Score = 218 bits (110), Expect = 5e-055
Identities = 191/218 (87%)
Strand = Plus / Plus
Query: 263 ctgacgctggaccgcacgtccggctccgggttccagtccaagagcgagtacctgttcggc 322
|||||||||||||| || ||||| |||||||||||||||| | ||||||||| ||||||
Sbjct: 320 ctgacgctggaccggacctccgggtccgggttccagtccaggcacgagtacctcttcggc 379
Query: 323 aagatcgacatgcagatcaagctggtgccaggcaactccgctggcacggtcaccaccttc 382
||||||||||||||| | |||||||| || |||||||| | ||||| |||||| ||| |
Sbjct: 380 aagatcgacatgcagctgaagctggtccccggcaactcggacggcaccgtcaccgcctac 439
Query: 383 tacctgtcgtcccagggcgacgcgcacgacgagatcgacttcgagttcctgggcaacgtg 442
||||||||||| |||||| || | ||||| |||||||||||||||||||| ||||||||
Sbjct: 440 tacctgtcgtcgcagggcaacacccacgatgagatcgacttcgagttcctcggcaacgtc 499
Query: 443 agcggggagccctacacgctgcacaccaacgtgttcac 480
||| ||||||||||||||||||||||||||||||||
Sbjct: 500 tccggcgagccctacacgctgcacaccaacgtgttcac 537
>gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_51_G03_A002 5', mRNA sequence
Length = 520
Score = 206 bits (104), Expect = 2e-051
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| | ||||||||||| |
Sbjct: 176 tccgggtcggggttccagtccaagtcccagtacctctacggccacttcgacatgcagctg 235
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 236 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 295
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 296 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 355
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 356 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 415
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 416 ttcgaccccaccgcggacttccacgcctactc 447
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 77 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 130
>gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_A06_A002 5', mRNA sequence
Length = 697
Score = 206 bits (104), Expect = 2e-051
Identities = 230/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 261 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 320
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 321 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 380
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 381 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggggagccctacacg 440
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 441 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 500
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 501 ttcgaccccaccgcggacttccacgcctactc 532
>gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 656
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 183 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 242
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 243 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 302
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 303 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 362
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 363 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 422
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 423 ttcgaccccaccgcggacttccacgcctactc 454
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 84 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 137
>gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f020l09, DNA
sequence
Length = 629
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Minus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 315 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 256
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 255 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 196
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 195 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 136
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 135 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 76
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 75 ttcgaccccaccgcggacttccacgcctactc 44
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 414 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 361
>gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 263 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 322
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 323 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 382
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 383 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 442
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 443 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 502
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 503 ttcgaccccaccgcggacttccacgcctactc 534
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 164 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 217
>gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 584
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 267 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 326
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 327 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 386
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 387 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 446
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 447 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 506
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 507 ttcgaccccaccgcggacttccacgcctactc 538
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 168 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 221
>gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_F11_A012 5', mRNA sequence
Length = 690
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 287 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 346
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 347 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 406
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 407 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 466
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 467 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 526
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 527 ttcgaccccaccgcggacttccacgcctactc 558
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 188 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 241
>gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_F09_A012 5', mRNA sequence
Length = 695
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 293 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 352
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 353 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 412
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 413 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 472
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 473 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 532
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 533 ttcgaccccaccgcggacttccacgcctactc 564
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 194 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 247
>gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_65_F03_A012 5', mRNA sequence
Length = 607
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 295 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 354
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 355 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 414
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 415 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 474
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 475 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 534
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 535 ttcgaccccaccgcggacttccacgcctactc 566
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 196 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 249
>gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_G11_A012 5', mRNA sequence
Length = 726
Score = 198 bits (100), Expect = 5e-049
Identities = 229/272 (84%)
Strand = Plus / Plus
Query: 281 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 340
||||| || ||||||||||||||| | ||||||| | |||| ||||||||||| |
Sbjct: 287 tccgggtcggggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctg 346
Query: 341 aagctggtgccaggcaactccgctggcacggtcaccaccttctacctgtcgtcccagggc 400
||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 347 aagctggtgccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggc 406
Query: 401 gacgcgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacg 460
||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 407 agcgcccacgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacg 466
Query: 461 ctgcacaccaacgtgttcacgcgcggacagggccagcgggagcagcagttccgcctctgg 520
||||||||||||||| || | || | ||| |||||||||||||||||| | |||
Sbjct: 467 gtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtgg 526
Query: 521 ttcgaccctaccactgccttccacacctactc 552
|||||||| ||| | | ||||||| |||||||
Sbjct: 527 ttcgaccccaccgcggacttccacgcctactc 558
Score = 44.1 bits (22), Expect = 0.017
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 182 ggcggcaacttctaccaggacacagagatgacctggggcgatggccgcggcaag 235
||||||||||||||||||||| || || || |||||||| ||||| ||||||
Sbjct: 188 ggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgtggcaag 241
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 160,744
Number of Sequences: 832831
Number of extensions: 160744
Number of successful extensions: 45731
Number of sequences better than 0.5: 253
Number of HSP's better than 0.5 without gapping: 251
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 45102
Number of HSP's gapped (non-prelim): 561
length of query: 678
length of database: 491,359,669
effective HSP length: 19
effective length of query: 659
effective length of database: 475,535,880
effective search space: 313378144920
effective search space used: 313378144920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)