BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.4
(1628 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 850 0.0
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 844 0.0
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 841 0.0
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 779 0.0
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 775 0.0
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 771 0.0
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 769 0.0
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 763 0.0
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 763 0.0
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 747 0.0
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 737 0.0
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 737 0.0
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 720 0.0
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 716 0.0
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 714 0.0
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 712 0.0
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 710 0.0
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 698 0.0
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 694 0.0
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 686 0.0
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 678 0.0
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 656 0.0
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 636 e-180
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 632 e-179
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 615 e-174
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 611 e-173
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 595 e-168
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 587 e-165
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 561 e-158
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 561 e-158
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 559 e-157
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 553 e-155
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 545 e-153
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 523 e-146
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 521 e-146
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 507 e-142
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 498 e-139
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 498 e-139
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 490 e-136
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 480 e-133
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 474 e-131
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 464 e-128
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 460 e-127
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 456 e-126
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 452 e-125
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 440 e-121
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 432 e-119
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 420 e-115
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 418 e-115
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 410 e-112
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 410 e-112
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 408 e-112
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 400 e-109
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 381 e-103
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 381 e-103
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 357 2e-096
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 357 2e-096
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 339 5e-091
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 337 2e-090
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 329 5e-088
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 309 4e-082
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 309 4e-082
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 307 2e-081
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 305 7e-081
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 303 3e-080
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 297 2e-078
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 297 2e-078
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 293 3e-077
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 291 1e-076
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 285 6e-075
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 285 6e-075
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 281 1e-073
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 281 1e-073
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 274 2e-071
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 274 2e-071
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 272 1e-070
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 272 1e-070
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 266 6e-069
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 264 2e-068
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 260 4e-067
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 260 4e-067
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 238 1e-060
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 200 3e-049
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 192 7e-047
gb|CW279013.1|CW279013 104_753_11406855_116_35427_054 Sorgh... 168 1e-039
gb|CW279015.1|CW279015 104_753_11406856_116_35428_054 Sorgh... 168 1e-039
gb|CF482113.1|CF482113 POL1_76_F02.g1_A002 Pollen Sorghum b... 159 1e-036
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 137 4e-030
gb|CF488327.1|CF488327 POL1_49_E07.b1_A002 Pollen Sorghum b... 129 9e-028
gb|CF481907.1|CF481907 POL1_75_C02.b1_A002 Pollen Sorghum b... 125 1e-026
gb|CW197884.1|CW197884 104_622_11181920_116_36832_026 Sorgh... 117 3e-024
gb|BG048519.1|BG048519 OV1_14_E10.g2_A002 Ovary 1 (OV1) Sor... 117 3e-024
gb|BG048591.1|BG048591 OV1_14_E10.b1_A002 Ovary 1 (OV1) Sor... 117 3e-024
gb|CF481314.1|CF481314 POL1_71_F02.b1_A002 Pollen Sorghum b... 117 3e-024
gb|CF484442.1|CF484442 POL1_25_H01.b1_A002 Pollen Sorghum b... 117 3e-024
gb|CF488802.1|CF488802 POL1_52_G02.b1_A002 Pollen Sorghum b... 117 3e-024
gb|CW323758.1|CW323758 104_818_11476800_116_35905_096 Sorgh... 107 3e-021
gb|CW271206.1|CW271206 104_743_11402872_148_35345_060 Sorgh... 86 1e-014
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 84 5e-014
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 84 5e-014
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 84 5e-014
gb|BG355623.1|BG355623 EM1_16_B04.g1_A002 Embryo 1 (EM1) So... 84 5e-014
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 70 7e-010
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 70 7e-010
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 70 7e-010
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 70 7e-010
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 70 7e-010
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 70 7e-010
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 70 7e-010
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 70 7e-010
gb|CW218315.1|CW218315 104_651_11196122_148_37070_001 Sorgh... 68 3e-009
gb|CW228540.1|CW228540 104_668_11206430_148_37249_055 Sorgh... 68 3e-009
gb|CW238260.1|CW238260 104_695_11216630_148_37420_063 Sorgh... 68 3e-009
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 66 1e-008
gb|CW312482.1|CW312482 104_802_11470780_148_35779_010 Sorgh... 62 2e-007
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 58 3e-006
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 58 3e-006
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 58 3e-006
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 58 3e-006
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 58 3e-006
gb|CW789407.1|CW789407 SP__Ba0057J16.r SP__Ba Sorghum propi... 58 3e-006
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 56 1e-005
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 56 1e-005
gb|CW421378.1|CW421378 fsbb001f130c19k0 Sorghum methylation... 56 1e-005
gb|CW470062.1|CW470062 fsbb001f223b09f0 Sorghum methylation... 56 1e-005
gb|CF484715.1|CF484715 POL1_27_B10.b1_A002 Pollen Sorghum b... 56 1e-005
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 52 2e-004
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 52 2e-004
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 52 2e-004
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 52 2e-004
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 52 2e-004
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 52 2e-004
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 52 2e-004
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 52 2e-004
gb|BG357591.1|BG357591 OV2_31_G11.g1_A002 Ovary 2 (OV2) Sor... 52 2e-004
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 52 2e-004
gb|CW446665.1|CW446665 fsbb001f179g22k0 Sorghum methylation... 50 7e-004
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 48 0.003
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 48 0.003
gb|CW181410.1|CW181410 104_596_11163492_148_36653_042 Sorgh... 48 0.003
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 48 0.003
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 48 0.003
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 48 0.003
gb|CW390138.1|CW390138 fsbb001f075k21f0 Sorghum methylation... 48 0.003
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 48 0.003
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 48 0.003
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 46 0.010
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 46 0.010
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 46 0.010
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 46 0.010
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 46 0.010
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 44 0.040
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 44 0.040
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 44 0.040
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 44 0.040
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 44 0.040
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 44 0.040
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 44 0.040
gb|CW412966.1|CW412966 fsbb001f108o03f0 Sorghum methylation... 44 0.040
gb|BF587798.1|BF587798 FM1_40_F09.g1_A003 Floral-Induced Me... 44 0.040
gb|BG239969.1|BG239969 OV1_31_D01.g1_A002 Ovary 1 (OV1) Sor... 44 0.040
gb|CF483069.1|CF483069 POL1_11_C05.b1_A002 Pollen Sorghum b... 44 0.040
gb|CL162132.1|CL162132 104_354_10806198_114_31830_102 Sorgh... 42 0.16
gb|CL167950.1|CL167950 104_365_10810457_114_31804_137 Sorgh... 42 0.16
gb|CW039366.1|CW039366 104_272_10505460_114_30389 Sorghum m... 42 0.16
gb|CW050592.1|CW050592 104_290_10514748_115_30205 Sorghum m... 42 0.16
gb|CW076091.1|CW076091 104_365_10810457_116_31805_137 Sorgh... 42 0.16
gb|CW167087.1|CW167087 104_576_11153413_148_37468_061 Sorgh... 42 0.16
gb|CW189447.1|CW189447 104_610_11173970_116_37100_003 Sorgh... 42 0.16
gb|CW194526.1|CW194526 104_617_11180143_116_36787_020 Sorgh... 42 0.16
gb|CW194527.1|CW194527 104_617_11180143_148_36791_020 Sorgh... 42 0.16
gb|CW296153.1|CW296153 104_777_11461340_116_35623_068 Sorgh... 42 0.16
gb|CW319220.1|CW319220 104_811_11474368_116_35879_052 Sorgh... 42 0.16
gb|CW361386.1|CW361386 fsbb001f029o24k0 Sorghum methylation... 42 0.16
gb|CW477760.1|CW477760 fsbb001f235e04f0 Sorghum methylation... 42 0.16
gb|CF482066.1|CF482066 POL1_76_H02.b1_A002 Pollen Sorghum b... 42 0.16
gb|CF482303.1|CF482303 POL1_6_D06.b1_A002 Pollen Sorghum bi... 42 0.16
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 850 bits (429), Expect = 0.0
Identities = 629/696 (90%), Gaps = 6/696 (0%)
Strand = Plus / Plus
Query: 262 cctcatacccaagggcgacttccttgtcggacaactcaacttcacaggcccttgcaaggg 321
|||||| || |||||||||| ||| ||||||| |||||||||||| ||||| ||||||||
Sbjct: 1 cctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccgtgcaaggg 60
Query: 322 cgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagccagtacaa 381
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagccagtacaa 120
Query: 382 ggaccatggtaattggatcgagattctacgcgtggataacctggtcatcaccggcaaggg 441
|| |||| ||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 121 gg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcaccggcaaggg 174
Query: 442 aaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaagaagtacga 501
|| || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 175 gaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaagaagtacga 234
Query: 502 ctgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgtccgg 561
|||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 235 ctgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtgtccgg 294
Query: 562 ggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggacatgct 621
| |||||||||| ||| |||||||||||||||||||| ||| || ||||||||||||| |
Sbjct: 295 gatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggacatgtt 354
Query: 622 gatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatccacat 681
||| ||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 355 gattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatccacat 414
Query: 682 gggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgactgcat 741
||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 415 gggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcat 474
Query: 742 ctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggcca 801
|||||||||||||||||| |||||||||||||||||||||| || |||||||| |||||
Sbjct: 475 ctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggcca 534
Query: 802 cggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaa 861
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tggcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaa 594
Query: 862 cgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgagga 921
||| ||||| || || || |||||||||| |||| |||| |||||||||||||||||
Sbjct: 595 cgtgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgagga 654
Query: 922 cgccgcctccgtgctcaccgtctccaagatccacta 957
|||||||||||||||||||| |||||||||||||||
Sbjct: 655 cgccgcctccgtgctcaccgcctccaagatccacta 690
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 844 bits (426), Expect = 0.0
Identities = 623/689 (90%), Gaps = 6/689 (0%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 16 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 75
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 76 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 135
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 136 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 195
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 196 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 255
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 256 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 309
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 310 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 369
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 370 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 429
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 430 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 489
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 490 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 549
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 550 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 609
Query: 734 gactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggc 793
|||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct: 610 gactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggc 669
Query: 794 cctggccacggcatcagcatcggcagcct 822
|| || || ||||||||||||||||||||
Sbjct: 670 cccgggcatggcatcagcatcggcagcct 698
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 841 bits (424), Expect = 0.0
Identities = 639/708 (90%), Gaps = 2/708 (0%)
Strand = Plus / Plus
Query: 420 acctggtcatcaccggcaagggaaaccttgacgggcagggcccagccgtgtggagcaaga 479
||||||| |||||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 1 acctggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaaga 60
Query: 480 actcctgcaccaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcg 539
|||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||
Sbjct: 61 actcgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacg 120
Query: 540 tgaacaacggggaggtgtccggggtcacgctgctcaactccaagttcttccacatgaaca 599
||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||
Sbjct: 121 tgaacaacggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacg 180
Query: 600 tgtaccggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccggggacagcc 659
||| || ||||||||||||| |||| ||||| ||||| || |||||||||||||||||||
Sbjct: 181 tgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagcc 240
Query: 660 ccaacacggatggcatccacatgggcgactcatccgggatcaccatcaccaacaccgtca 719
|||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||
Sbjct: 241 ccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtca 300
Query: 720 ttggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccg 779
| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 301 tcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccg 360
Query: 780 gcgtgacctgcggccctggccacggcatcagcatcggcagcctagggcggtacaaggacg 839
|||| || |||||||| ||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 361 gcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacg 420
Query: 840 agaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttcggcg 899
||||||||||||||||||||||||| ||||| || || || |||||||||| ||||
Sbjct: 421 agaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcc 480
Query: 900 tccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatccactacg 959
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 481 tccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatg 540
Query: 960 agaatatcaagatggaggactcagccaaccccatcttcatcgacatgaagtactgcccca 1019
|||| ||||||||||||||||| | |||||||| |||||||||||||||||||||| |
Sbjct: 541 agaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagtactgcccta 600
Query: 1020 acaagttgtgtactgccaacggcgcctccaaggtca-ccgtcaaggacgtcaccttcaag 1078
|||| | || || |||| ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 601 acaaaatctgcaccgccagcggcgcctccaaggtcacccgtc-aggacgtctccttcaag 659
Query: 1079 aacatcaccggcacctcctccaccccggaggccgttagcctgctctgc 1126
||| |||||||||||||| ||| ||| |||||||| ||||||||||||
Sbjct: 660 aacgtcaccggcacctccgccagccccgaggccgtcagcctgctctgc 707
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 779 bits (393), Expect = 0.0
Identities = 566/624 (90%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 197 gacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaagcag 256
|||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 98 gacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaagcag 157
Query: 257 acaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggcccttgc 316
|| |||||||| || |||||||||| ||| ||||||| |||||||||||| ||||| |||
Sbjct: 158 acgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccgtgc 217
Query: 317 aagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagccag 376
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 218 aagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagccag 277
Query: 377 tacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcaccggc 436
||||||| |||| ||||||||||| || || ||||| |||||||| |||||||||
Sbjct: 278 tacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcaccggc 331
Query: 437 aagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaagaag 496
||||| || || |||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 332 aaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaagaag 391
Query: 497 tacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtg 556
||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 392 tacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtg 451
Query: 557 tccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggac 616
|||||| |||||||||| ||| |||||||||||||||||||| ||| || ||||||||||
Sbjct: 452 tccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggac 511
Query: 617 atgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatc 676
||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 512 atgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatc 571
Query: 677 cacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgac 736
|||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 572 cacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgac 631
Query: 737 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccct 796
||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 632 tgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggcccc 691
Query: 797 ggccacggcatcagcatcggcagc 820
||||| ||||||||||||||||||
Sbjct: 692 ggccatggcatcagcatcggcagc 715
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 26 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 68
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 775 bits (391), Expect = 0.0
Identities = 567/626 (90%), Gaps = 6/626 (0%)
Strand = Plus / Minus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 622 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 563
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 562 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 503
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 502 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 443
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 442 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 383
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 382 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 329
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 328 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 269
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 268 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 209
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 208 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 149
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 148 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 89
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 88 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 29
Query: 734 gactgcatctccatcggccccgggac 759
||||||||||||||||||||||||||
Sbjct: 28 gactgcatctccatcggccccgggac 3
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 771 bits (389), Expect = 0.0
Identities = 565/624 (90%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 116 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 175
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 176 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 235
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 236 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 295
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 296 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 355
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 356 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 409
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 410 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 469
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 470 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 529
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 530 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 589
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 590 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 649
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 650 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 709
Query: 734 gactgcatctccatcggccccggg 757
||||||||||||||||||||||||
Sbjct: 710 gactgcatctccatcggccccggg 733
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 11 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 53
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 769 bits (388), Expect = 0.0
Identities = 576/639 (90%), Gaps = 6/639 (0%)
Strand = Plus / Minus
Query: 197 gacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaagcag 256
||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 633 gacagcacgaaggctgtgcaggaggcatgaacgtcggcgtgcggcggcaccgggaagcag 574
Query: 257 acaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggcccttgc 316
|| |||||||| || |||||||| | ||| || |||| |||||||||||| ||||| ||
Sbjct: 573 acgatcctcatccctaagggcgaatacctcgtgggaccactcaacttcaccggcccgagc 514
Query: 317 aagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagccag 376
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 513 aagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagccag 454
Query: 377 tacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcaccggc 436
||||||| |||| ||||||||||| || || ||||| |||||||| |||||||||
Sbjct: 453 tacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcaccggc 400
Query: 437 aagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaagaag 496
||||| || || |||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct: 399 aaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaagaag 340
Query: 497 tacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtg 556
||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 339 tacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtg 280
Query: 557 tccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggac 616
|||||| |||||||||| ||| |||||||||||||||||||| ||| || ||||||||||
Sbjct: 279 tccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggac 220
Query: 617 atgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatc 676
||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 219 atgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatc 160
Query: 677 cacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgac 736
|||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 159 cacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgac 100
Query: 737 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccct 796
||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 99 tgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggcccc 40
Query: 797 ggccacggcatcagcatcggcagcctagggcggtacaag 835
||||| |||||||||||||||||||| ||||||||||||
Sbjct: 39 ggccatggcatcagcatcggcagcctggggcggtacaag 1
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 763 bits (385), Expect = 0.0
Identities = 564/624 (90%), Gaps = 6/624 (0%)
Strand = Plus / Minus
Query: 188 ggcaagacagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcact 247
||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 618 ggcaagaaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcacc 559
Query: 248 gggaagcagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcaca 307
||||||||||| |||||||| || |||||||||| ||| ||||||| ||||||||||||
Sbjct: 558 gggaagcagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcacc 499
Query: 308 ggcccttgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggac 367
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 498 ggcccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggac 439
Query: 368 ctaagccagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtc 427
|| ||||||||||||| |||| ||||||||||| || || ||||| ||||||||
Sbjct: 438 ctgagccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtg 385
Query: 428 atcaccggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgc 487
|||||||||||||| || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 384 atcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgc 325
Query: 488 accaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 547
||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 324 gccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaac 265
Query: 548 ggggaggtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccgg 607
||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |
Sbjct: 264 ggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccag 205
Query: 608 tgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacg 667
|||||||||||| |||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 204 tgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacg 145
Query: 668 gatggcatccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtc 727
|| |||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||
Sbjct: 144 gacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtc 85
Query: 728 ggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacc 787
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 84 ggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcaca 25
Query: 788 tgcggccctggccacggcatcagc 811
|||||||| ||||| |||||||||
Sbjct: 24 tgcggccccggccatggcatcagc 1
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 763 bits (385), Expect = 0.0
Identities = 564/624 (90%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 125 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 184
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||
Sbjct: 185 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgcgcggcggcaccgggaag 244
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 245 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 304
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 305 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 364
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 365 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 418
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 419 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 478
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 479 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 538
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 539 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 598
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 599 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 658
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 659 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 718
Query: 734 gactgcatctccatcggccccggg 757
||||||||||||||||||||||||
Sbjct: 719 gactgcatctccatcggccccggg 742
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 20 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 62
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 747 bits (377), Expect = 0.0
Identities = 559/620 (90%), Gaps = 6/620 (0%)
Strand = Plus / Minus
Query: 303 tcacaggcccttgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgacca 362
|||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 614 tcaccggcccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgacca 555
Query: 363 cggacctaagccagtacaaggaccatggtaattggatcgagattctacgcgtggataacc 422
||||||| ||||||||||||| |||| ||||||||||| || || ||||| ||||
Sbjct: 554 cggacctgagccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacc 501
Query: 423 tggtcatcaccggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaact 482
|||| |||||||||||||| || || |||||||||||||| |||||||||||||||||||
Sbjct: 500 tggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaact 441
Query: 483 cctgcaccaagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtga 542
| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||
Sbjct: 440 cgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtga 381
Query: 543 acaacggggaggtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgt 602
|||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||
Sbjct: 380 acaacggggaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgt 321
Query: 603 accggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccggggacagcccca 662
|| ||||||||||||| |||| ||||| ||||| || ||||||||||||||||||||||
Sbjct: 320 tccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccggggacagcccca 261
Query: 663 acacggatggcatccacatgggcgactcatccgggatcaccatcaccaacaccgtcattg 722
||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |
Sbjct: 260 acacggacggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcg 201
Query: 723 gcgtcggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcg 782
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 200 gcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcg 141
Query: 783 tgacctgcggccctggccacggcatcagcatcggcagcctagggcggtacaaggacgaga 842
| || |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 140 tcacatgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgaga 81
Query: 843 aggacgtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttcggcgtcc 902
|||||||||||||||||||||| ||||| || || || |||||||||| |||| |||
Sbjct: 80 aggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctcc 21
Query: 903 gcatcaaggcgtacgaggac 922
| ||||||||||||||||||
Sbjct: 20 ggatcaaggcgtacgaggac 1
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 737 bits (372), Expect = 0.0
Identities = 548/607 (90%), Gaps = 6/607 (0%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 125 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 184
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 185 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 244
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 245 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 304
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 305 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 364
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 365 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 418
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 419 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 478
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 479 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 538
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 539 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 598
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 599 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 658
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 659 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 718
Query: 734 gactgca 740
|||||||
Sbjct: 719 gactgca 725
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 20 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 62
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 737 bits (372), Expect = 0.0
Identities = 554/615 (90%), Gaps = 6/615 (0%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 91 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 150
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 151 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 210
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| ||||||| || |||||||||| ||| ||| ||| |||||||||||| |||||
Sbjct: 211 cagacgatcctcacccctaagggcgactacctcgtctgaccactcaacttcaccggcccg 270
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 271 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 330
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 331 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 384
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 385 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 444
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 445 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 504
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 505 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 564
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 565 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 624
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgac 733
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 625 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgac 684
Query: 734 gactgcatctccatc 748
|||||||||||||||
Sbjct: 685 gactgcatctccatc 699
Score = 48.1 bits (24), Expect = 0.003
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 aatgcgatgagagccttgttcctcctgg 77
||||||||||||||||| ||||||||||
Sbjct: 1 aatgcgatgagagccttcttcctcctgg 28
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 720 bits (363), Expect = 0.0
Identities = 579/651 (88%)
Strand = Plus / Plus
Query: 581 aagttcttccacatgaacatgtaccggtgcaaggacatgctgatcaaggacgtgaccgtg 640
|||||||||||||||||| ||| || ||||||||||||| |||| ||||| ||||| ||
Sbjct: 1 aagttcttccacatgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtc 60
Query: 641 acggcgcccggggacagccccaacacggatggcatccacatgggcgactcatccgggatc 700
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||
Sbjct: 61 acggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggggtc 120
Query: 701 accatcaccaacaccgtcattggcgtcggcgacgactgcatctccatcggccccgggacc 760
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accatcgagaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggaca 180
Query: 761 tccaaggtgaacatcaccggcgtgacctgcggccctggccacggcatcagcatcggcagc 820
|||||||||||||||||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 181 accaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagc 240
Query: 821 ctagggcggtacaaggacgagaaggacgtcacggacatcaacgtcaaggattgcactctt 880
|| ||||||||||||||||||||||||||||||||||||||||| ||||| || || ||
Sbjct: 241 ctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctg 300
Query: 881 aagaagacgatgttcggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcacc 940
|||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcacc 360
Query: 941 gtctccaagatccactacgagaatatcaagatggaggactcagccaaccccatcttcatc 1000
| ||||||||||||||| ||||| ||||||||||||||||| | |||||||| |||||
Sbjct: 361 gcctccaagatccactatgagaacatcaagatggaggactcgtcgaaccccattatcatc 420
Query: 1001 gacatgaagtactgccccaacaagttgtgtactgccaacggcgcctccaaggtcaccgtc 1060
||||||||||||||||| ||||| | || || |||| ||||||||||||||||||||||
Sbjct: 421 gacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtc 480
Query: 1061 aaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggccgttagcctg 1120
||||||||| ||||||||||| |||||||||||||| ||| ||| |||||||| ||||||
Sbjct: 481 aaggacgtctccttcaagaacgtcaccggcacctccgccagccccgaggccgtcagcctg 540
Query: 1121 ctctgcactgccaaggtcccatgcaccggcgtcaccatggatgacgtcaacgtcgagtat 1180
|||||| | | |||| |||| ||||| ||||||||||||||| ||||||| ||||| ||
Sbjct: 541 ctctgctccgacaagatcccctgcactggcgtcaccatggataacgtcaaggtcgaatac 600
Query: 1181 agcggcaccaacaacaagaccatggctatatgcacgaacgccaagggcagc 1231
|| |||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 601 agtggcaaaaacaacaagaccatggccgtatgccaaaacgccaagggcagc 651
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 716 bits (361), Expect = 0.0
Identities = 535/592 (90%), Gaps = 7/592 (1%)
Strand = Plus / Plus
Query: 230 tcggcgtgcggcggcactgggaagcagacaatcctcatacccaagggcgacttccttgtc 289
||||||||||||||||| ||||||||||| |||||||| || |||||||||| ||| |||
Sbjct: 105 tcggcgtgcggcggcaccgggaagcagacgatcctcatccctaagggcgactacctcgtc 164
Query: 290 ggacaactcaacttcacaggcccttgcaagggcgacgtgaccatccaggtggatggcaat 349
|||| |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 165 ggaccactcaacttcaccggcccgtgcaagggcgacgtgaccatccaggtggacggcaat 224
Query: 350 ctgctggcgaccacggacctaagccagtacaaggaccatggtaattggatcgagattcta 409
|||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||
Sbjct: 225 ctgctggcgaccacggacctgagccagtacaagg------gtaactggatcgagatcctg 278
Query: 410 cgcgtggataacctggtcatcaccggcaagggaaaccttgacgggcagggcccagccgtg 469
|| ||||| |||||||| |||||||||||||| || || |||||||||||||| ||||||
Sbjct: 279 cgtgtggacaacctggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtg 338
Query: 470 tggagcaagaactcctgcaccaagaagtacgactgcaagatccttcccaactcgctggtg 529
|||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 339 tggagcaagaactcgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtg 398
Query: 530 atggacttcgtgaacaacggggaggtgtccggggtcacgctgctcaactccaagttcttc 589
|||||| |||||| |||||||||||||||||| |||||||||| ||| |||||||||||
Sbjct: 399 ctggactacgtgaa-aacggggaggtgtccgggatcacgctgctaaacgccaagttcttc 457
Query: 590 cacatgaacatgtaccggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgccc 649
||||||||| ||| || ||||||||||||| |||| ||||| ||||| || |||||||||
Sbjct: 458 cacatgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgccc 517
Query: 650 ggggacagccccaacacggatggcatccacatgggcgactcatccgggatcaccatcacc 709
|||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||
Sbjct: 518 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgag 577
Query: 710 aacaccgtcattggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 769
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 578 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtg 637
Query: 770 aacatcaccggcgtgacctgcggccctggccacggcatcagcatcggcagcc 821
|||||||||||||| || |||||||| ||||| |||||||||||||||||||
Sbjct: 638 aacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcc 689
Score = 54.0 bits (27), Expect = 4e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 17 atggcgtgcacttgcaatgcgatgagagccttcttcctcctgg 59
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 714 bits (360), Expect = 0.0
Identities = 564/629 (89%), Gaps = 11/629 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaat---ggc 190
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgaaagcggc 185
Query: 191 aagacagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactggg 250
|||| |||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 186 aagaaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccggg 245
Query: 251 aagcagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggc 310
|||||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||
Sbjct: 246 aagcagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggc 305
Query: 311 ccttgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggaccta 370
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 306 ccgtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctg 365
Query: 371 agccagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatc 430
||||||||||||| |||| ||||||||||| || || ||||| |||||||| |||
Sbjct: 366 agccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatc 419
Query: 431 accggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcacc 490
||||||||||| || || |||||||||||||| |||||||||||||||||||| ||| ||
Sbjct: 420 accggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgcc 479
Query: 491 aagaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggg 550
||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||
Sbjct: 480 aagaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaccaacggg 539
Query: 551 gaggtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgc 610
|||||||||||| |||||||||| ||| |||||||||||||||||||| ||| || ||||
Sbjct: 540 gaggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgc 599
Query: 611 aaggacatgctg-atcaa-ggacgtgaccgtgacggcgcccggggacagccccaacacgg 668
||||||||| || || || ||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 600 aaggacatgttgnattaagggatgtgacggtcacggcgcccggggacagccccaacacgg 659
Query: 669 atggcatccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcg 728
| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||
Sbjct: 660 acggcatccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcg 719
Query: 729 gcgacgactgcatctccatcggccccggg 757
|||||||||||||||||||||||||||||
Sbjct: 720 gcgacgactgcatctccatcggccccggg 748
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 21 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 63
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 712 bits (359), Expect = 0.0
Identities = 535/594 (90%), Gaps = 6/594 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 129 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 188
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 189 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 248
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 249 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 308
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 309 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 368
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 369 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 422
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 423 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 482
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 483 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 542
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 543 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 602
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 603 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 662
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtc 727
||||||||||||||||| |||||| |||||||| ||||||||||| ||||||
Sbjct: 663 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtc 716
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 24 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 66
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 710 bits (358), Expect = 0.0
Identities = 534/593 (90%), Gaps = 6/593 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 133 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 192
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 193 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 252
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 253 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 312
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 313 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 372
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 373 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 426
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 427 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 486
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 487 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 546
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 547 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 606
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 607 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 666
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgt 726
||||||||||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 667 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcatcggcgt 719
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 28 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 70
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 698 bits (352), Expect = 0.0
Identities = 528/587 (89%), Gaps = 6/587 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 127 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 186
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 187 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 246
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 247 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 306
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 307 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 366
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 367 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 420
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| | || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 421 ggcaaggggaggctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 480
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 481 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 540
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 541 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 600
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 601 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 660
Query: 674 atccacatgggcgactcatccgggatcaccatcaccaacaccgtcat 720
||||||||||||||||| |||||| |||||||| |||||||||||
Sbjct: 661 atccacatgggcgactcgtccggggtcaccatcgagaacaccgtcat 707
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 22 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 64
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 694 bits (350), Expect = 0.0
Identities = 517/573 (90%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 141 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 200
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||
Sbjct: 201 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccggggag 260
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 261 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 320
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 321 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 380
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 381 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 434
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 435 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 494
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 495 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 554
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 555 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 614
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 615 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 674
Query: 674 atccacatgggcgactcatccgggatcaccatc 706
||||||||||||||||| |||||| ||||||||
Sbjct: 675 atccacatgggcgactcgtccggggtcaccatc 707
Score = 54.0 bits (27), Expect = 4e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 36 atggcgtgcagaggcaatgcgatgagagccttcttcctcctgg 78
>gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_F02_A002 5', mRNA sequence
Length = 693
Score = 686 bits (346), Expect = 0.0
Identities = 516/573 (90%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 185
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 186 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 245
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 246 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 305
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 306 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 365
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 366 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 419
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 420 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 479
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 480 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacgacggggag 539
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 540 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 599
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||| ||||||| |||
Sbjct: 600 gacatgttgattaaggatgtgacggtcacggcgcccggggacagcccccacacggacggc 659
Query: 674 atccacatgggcgactcatccgggatcaccatc 706
||||||||||||||||| |||||| ||||||||
Sbjct: 660 atccacatgggcgactcgtccggggtcaccatc 692
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 21 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 63
>gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_C02_A002 5', mRNA sequence
Length = 682
Score = 678 bits (342), Expect = 0.0
Identities = 503/557 (90%), Gaps = 6/557 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 129 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 188
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 189 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 248
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 249 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 308
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 309 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 368
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
|||||||||| |||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 369 cagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 422
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 423 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 482
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 483 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 542
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||| | ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 543 gtgtccgggatcacgctggtaaacgccaagttcttccacatgaacgtgttccagtgcaag 602
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggc 673
|||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 603 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacggc 662
Query: 674 atccacatgggcgactc 690
|||||||||||||||||
Sbjct: 663 atccacatgggcgactc 679
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 24 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 66
>gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_A10_A002 5', mRNA sequence
Length = 651
Score = 656 bits (331), Expect = 0.0
Identities = 513/573 (89%), Gaps = 7/573 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 85 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 144
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 145 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 204
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcgg-acaactcaacttcacaggccc 312
||||| |||||||| || |||||||||| ||| ||| | | ||||||||||| |||||
Sbjct: 205 cagacgatcctcatccctaagggcgactacctcgtctgtatttctcaacttcaccggccc 264
Query: 313 ttgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaag 372
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 265 gtgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgag 324
Query: 373 ccagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcac 432
||||||||||| |||| ||||||||||| || || ||||| |||||||| |||||
Sbjct: 325 ccagtacaagg------gtaactggatcgagatcctgcgtgtggacaacctggtgatcac 378
Query: 433 cggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaa 492
||||||||| || || |||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 379 cggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaa 438
Query: 493 gaagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacgggga 552
||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||
Sbjct: 439 gaagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacgggga 498
Query: 553 ggtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaa 612
|||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||
Sbjct: 499 ggtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccantgcaa 558
Query: 613 ggacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatgg 672
||||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 559 ggacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaacacggacgg 618
Query: 673 catccacatgggcgactcatccgggatcaccat 705
|||||||||||||||||| |||||| |||||||
Sbjct: 619 catccacatgggcgactcgtccggggtcaccat 651
>gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 706
Score = 636 bits (321), Expect = e-180
Identities = 479/532 (90%), Gaps = 6/532 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 181 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 240
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 241 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 300
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 301 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 360
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 361 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 420
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 421 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 474
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 475 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 534
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 535 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 594
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 595 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 654
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaaca 665
|||||| |||| || || ||||| || |||||||||||||||||||||||||
Sbjct: 655 gacatgttgattaaagatgtgacggtcacggcgcccggggacagccccaaca 706
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 76 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 118
>gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n16, DNA
sequence
Length = 695
Score = 632 bits (319), Expect = e-179
Identities = 477/530 (90%), Gaps = 6/530 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 172 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 231
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 232 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 291
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 292 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 351
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 352 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 411
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 412 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 465
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 466 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 525
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 526 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 585
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||| | ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 586 gtgtccgggatcacgctggtaaacgccaagttcttccacatgaacgtgttccagtgcaag 645
Query: 614 gacatgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaa 663
|||||| |||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 646 gacatgttgattaaggatgtgacggtcacggcgcccggggacagccccaa 695
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 67 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 109
>gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 5', mRNA sequence
Length = 645
Score = 615 bits (310), Expect = e-174
Identities = 469/521 (90%), Gaps = 7/521 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 131 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 190
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 191 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 250
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 251 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 310
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 311 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 370
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 371 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 424
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 425 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcaccaag 484
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 485 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 544
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacat-gaacatgtaccggtgcaa 612
||||||||| |||||||||| ||| |||||||||||||||| |||| ||| || ||||||
Sbjct: 545 gtgtccgggatcacgctgctaaacgccaagttcttccacatggaacgtgttccagtgcaa 604
Query: 613 ggacatgctgatcaaggacgtgaccgtgacggcgcccgggg 653
||||||| |||| ||||| ||||| || |||||||||||||
Sbjct: 605 ggacatgttgattaaggatgtgacggtcacggcgcccgggg 645
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 26 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 68
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 611 bits (308), Expect = e-173
Identities = 468/520 (90%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 504 gcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggaggtgtccgggg 563
|||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 526 gcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggaggtgtccggga 467
Query: 564 tcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggacatgctga 623
|||||||||| ||| |||||||||||||||||||| ||| || ||||||||||||| |||
Sbjct: 466 tcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaaggacatgttga 407
Query: 624 tcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatccacatgg 683
| ||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 406 ttaaggatgtgacggtcacggcgcccggggacagccccaacacggacggcatccacatgg 347
Query: 684 gcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgactgcatct 743
||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 346 gcgactcgtccggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcatct 287
Query: 744 ccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggccacg 803
|||||||||||||||| |||||||||||||||||||||| || |||||||| ||||| |
Sbjct: 286 ccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatg 227
Query: 804 gcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaacg 863
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacg 167
Query: 864 tcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgaggacg 923
| ||||| || || || |||||||||| |||| |||| |||||||||||||||||||
Sbjct: 166 tgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacg 107
Query: 924 ccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggaggactcag 983
|||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 106 ccgcctccgtgctcaccgcctccaagatccacta-gagaacatcaagagggaggactggt 48
Query: 984 ccaaccccatcttcatcgacatgaagtactgccccaacaa 1023
| |||||||| |||| |||| |||||||||||| |||||
Sbjct: 47 cgaaccccattatcatggacaggaagtactgccctaacaa 8
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 595 bits (300), Expect = e-168
Identities = 483/544 (88%)
Strand = Plus / Plus
Query: 727 cggcgacgactgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgac 786
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 1 cggcgacgactgcatctccatcggccccgggacaaccaaggtgaacatcaccggcgtcac 60
Query: 787 ctgcggccctggccacggcatcagcatcggcagcctagggcggtacaaggacgagaagga 846
|||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 atgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaagga 120
Query: 847 cgtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcat 906
|||||||||||||||||| ||||| || || || |||||||||| |||| |||| ||
Sbjct: 121 cgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggat 180
Query: 907 caaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatat 966
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||
Sbjct: 181 caaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacat 240
Query: 967 caagatggaggactcagccaaccccatcttcatcgacatgaagtactgccccaacaagtt 1026
||||||||||||||| | |||||||| |||||||||||||||||||||| ||||| |
Sbjct: 241 caagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaat 300
Query: 1027 gtgtactgccaacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcac 1086
|| || |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 301 ctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcac 360
Query: 1087 cggcacctcctccaccccggaggccgttagcctgctctgcactgccaaggtcccatgcac 1146
|||||||||| ||| ||| |||||||| |||||||||||| | | |||| |||| |||||
Sbjct: 361 cggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcac 420
Query: 1147 cggcgtcaccatggatgacgtcaacgtcgagtatagcggcaccaacaacaagaccatggc 1206
||||||||||||||| ||||||| |||||||| || |||| |||||||||||||||||
Sbjct: 421 tggcgtcaccatggataacgtcaaggtcgagtacagtggcaaaaacaacaagaccatggc 480
Query: 1207 tatatgcacgaacgccaagggcagcaccaagggttgcctcaaggagcttgcatgcttcta 1266
||||| ||||||||||||||| ||| || |||||||||||||| |||||||||||
Sbjct: 481 cgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttcta 540
Query: 1267 gacc 1270
||||
Sbjct: 541 gacc 544
>gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_23_F06_A002 5', mRNA sequence
Length = 616
Score = 587 bits (296), Expect = e-165
Identities = 442/491 (90%), Gaps = 6/491 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 132 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 191
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 192 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 251
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 252 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 311
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 312 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 371
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 372 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 425
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| ||||||||| |||||||||| ||| |||||
Sbjct: 426 ggcaaggggaagctcgacgggcagggccccgccgtgtggggcaagaactcgtgcgccaag 485
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 486 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 545
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaag 613
||||||||| |||||||||| ||| |||||||||||||||||||| ||| || |||||||
Sbjct: 546 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaacgtgttccagtgcaag 605
Query: 614 gacatgctgat 624
|||||| ||||
Sbjct: 606 gacatgttgat 616
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 27 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 69
>gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_H01_A002 5', mRNA sequence
Length = 586
Score = 561 bits (283), Expect = e-158
Identities = 414/458 (90%), Gaps = 6/458 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 135 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 194
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 195 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 254
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 255 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 314
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 315 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 374
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 375 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 428
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 429 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 488
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct: 489 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaacggggag 548
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttcca 591
||||||||| |||||||||| ||| |||||||||||||
Sbjct: 549 gtgtccgggatcacgctgctaaacgccaagttcttcca 586
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 30 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 72
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 561 bits (283), Expect = e-158
Identities = 469/531 (88%)
Strand = Plus / Plus
Query: 740 atctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggc 799
|||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||
Sbjct: 1 atctccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggc 60
Query: 800 cacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatc 859
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 catggcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatc 120
Query: 860 aacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgag 919
||||| ||||| || || || |||||||||| |||| |||| |||||||||||||||
Sbjct: 121 aacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgag 180
Query: 920 gacgccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggaggac 979
|||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct: 181 gacgccgcctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggac 240
Query: 980 tcagccaaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgccaac 1039
|| | |||||||| |||||||||||||||||||||| ||||| | || || |||| |
Sbjct: 241 tcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagc 300
Query: 1040 ggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctcc 1099
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 301 ggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgcc 360
Query: 1100 accccggaggccgttagcctgctctgcactgccaaggtcccatgcaccggcgtcaccatg 1159
| ||| |||||||| |||||||||||| | | |||| |||| ||||| ||||||||||||
Sbjct: 361 agccccgaggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatg 420
Query: 1160 gatgacgtcaacgtcgagtatagcggcaccaacaacaagaccatggctatatgcacgaac 1219
||| ||||||| ||||| || || |||| ||||||||||||||||| ||||| |||
Sbjct: 421 gataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaac 480
Query: 1220 gccaagggcagcaccaagggttgcctcaaggagcttgcatgcttctagacc 1270
|||||||||||| ||| || |||||||||||||| |||||||||||||||
Sbjct: 481 gccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctagacc 531
>gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 5', mRNA sequence
Length = 592
Score = 559 bits (282), Expect = e-157
Identities = 419/465 (90%), Gaps = 6/465 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 128 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 187
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||| ||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 188 aaggacagcgcgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 247
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 248 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 307
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 308 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 367
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 368 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 421
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 422 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 481
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaacggggag 553
|||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||||
Sbjct: 482 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaccaacggggag 541
Query: 554 gtgtccggggtcacgctgctcaactccaagttcttccacatgaac 598
||||||||| |||||||||| ||| ||||||||||||||||||||
Sbjct: 542 gtgtccgggatcacgctgctaaacgccaagttcttccacatgaac 586
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 23 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 65
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 459
Score = 553 bits (279), Expect = e-155
Identities = 405/447 (90%)
Strand = Plus / Plus
Query: 650 ggggacagccccaacacggatggcatccacatgggcgactcatccgggatcaccatcacc 709
|||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||
Sbjct: 7 ggggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgag 66
Query: 710 aacaccgtcattggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtg 769
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 67 aacaccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtg 126
Query: 770 aacatcaccggcgtgacctgcggccctggccacggcatcagcatcggcagcctagggcgg 829
|||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 127 aacatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcgg 186
Query: 830 tacaaggacgagaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacg 889
||||||||||||||||||||||||||||||||||| ||||| || || || |||||||||
Sbjct: 187 tacaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacg 246
Query: 890 atgttcggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaag 949
| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 247 agcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaag 306
Query: 950 atccactacgagaatatcaagatggaggactcagccaaccccatcttcatcgacatgaag 1009
|||||||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 307 atccactatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaag 366
Query: 1010 tactgccccaacaagttgtgtactgccaacggcgcctccaaggtcaccgtcaaggacgtc 1069
|||||||| ||||| | || || |||| |||||||||||||||||||||||||||||||
Sbjct: 367 tactgccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtc 426
Query: 1070 accttcaagaacatcaccggcacctcc 1096
||||||||||| ||||||||||||||
Sbjct: 427 tccttcaagaacgtcaccggcacctcc 453
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 545 bits (275), Expect = e-153
Identities = 464/527 (88%)
Strand = Plus / Plus
Query: 744 ccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggccacg 803
|||||||||||||||| |||||||||||||||||||||| || |||||||| ||||| |
Sbjct: 1 ccatcggccccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatg 60
Query: 804 gcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaacg 863
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatcagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacg 120
Query: 864 tcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgaggacg 923
| ||||| || || || |||||||||| |||| |||| |||||||||||||||||||
Sbjct: 121 tgaaggactgtacgctaaagaagacgagcaacggcctccggatcaaggcgtacgaggacg 180
Query: 924 ccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggaggactcag 983
|||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct: 181 ccgcctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgt 240
Query: 984 ccaaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgccaacggcg 1043
| |||||||| |||||||||||||||||||||| ||||| | || || |||| |||||
Sbjct: 241 cgaaccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcg 300
Query: 1044 cctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccc 1103
|||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||
Sbjct: 301 cctccaaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagcc 360
Query: 1104 cggaggccgttagcctgctctgcactgccaaggtcccatgcaccggcgtcaccatggatg 1163
| |||||||| |||||||||||| | | |||| |||| ||||| |||||||||||||||
Sbjct: 361 ccgaggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatggata 420
Query: 1164 acgtcaacgtcgagtatagcggcaccaacaacaagaccatggctatatgcacgaacgcca 1223
||||||| ||||| || || |||| ||||||||||||||||| ||||| |||||||
Sbjct: 421 acgtcaaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgcca 480
Query: 1224 agggcagcaccaagggttgcctcaaggagcttgcatgcttctagacc 1270
|||||||| ||| || |||||||||||||| |||||||| ||||||
Sbjct: 481 agggcagcgccacaggctgcctcaaggagctcgcatgcttttagacc 527
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 523 bits (264), Expect = e-146
Identities = 390/432 (90%)
Strand = Plus / Plus
Query: 592 catgaacatgtaccggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccgg 651
||||||| ||| || ||||||||||||| |||| ||||| ||||| || |||||||||||
Sbjct: 221 catgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccgg 280
Query: 652 ggacagccccaacacggatggcatccacatgggcgactcatccgggatcaccatcaccaa 711
|||||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||
Sbjct: 281 ggacagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgagaa 340
Query: 712 caccgtcattggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtgaa 771
||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 caccgtcatcggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtgaa 400
Query: 772 catcaccggcgtgacctgcggccctggccacggcatcagcatcggcagcctagggcggta 831
|||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 401 catcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggta 460
Query: 832 caaggacgagaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacgat 891
||||||||||||||||||||||||||||||||| ||||| || || || ||||||||||
Sbjct: 461 caaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgag 520
Query: 892 gttcggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaagat 951
|||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 521 caacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagat 580
Query: 952 ccactacgagaatatcaagatggaggactcagccaaccccatcttcatcgacatgaagta 1011
|||||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||
Sbjct: 581 ccactatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagta 640
Query: 1012 ctgccccaacaa 1023
|||||| |||||
Sbjct: 641 ctgccctaacaa 652
Score = 127 bits (64), Expect = 3e-027
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 133 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 192
Query: 194 acagacagcacgaaggctgtgcaggaggcatg 225
| |||||||||||||||||||||||||||||
Sbjct: 193 aaggacagcacgaaggctgtgcaggaggcatg 224
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 28 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 70
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 521 bits (263), Expect = e-146
Identities = 455/519 (87%)
Strand = Plus / Plus
Query: 752 cccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggccacggcatcagc 811
|||||||| |||||||||||||||||||||| || |||||||| ||||| |||||||||
Sbjct: 1 cccgggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagc 60
Query: 812 atcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaacgtcaaggat 871
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 atcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaaggac 120
Query: 872 tgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgaggacgccgcctcc 931
|| || || |||||||||| |||| |||| |||||||||||||||||||||||||||
Sbjct: 121 tgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgcctcc 180
Query: 932 gtgctcaccgtctccaagatccactacgagaatatcaagatggaggactcagccaacccc 991
|||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||
Sbjct: 181 gtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgtcgaacccc 240
Query: 992 atcttcatcgacatgaagtactgccccaacaagttgtgtactgccaacggcgcctccaag 1051
|| |||||||||||||||||||||| ||||| | || || |||| |||||||||||||
Sbjct: 241 attatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctccaag 300
Query: 1052 gtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccggaggcc 1111
|||||||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||||||
Sbjct: 301 gtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagccccgaggcc 360
Query: 1112 gttagcctgctctgcactgccaaggtcccatgcaccggcgtcaccatggatgacgtcaac 1171
|| |||||||| ||| | | |||| |||| ||||| ||||||||||||||| |||||||
Sbjct: 361 gtcagcctgctttgctccgacaagatcccctgcactggcgtcaccatggataacgtcaag 420
Query: 1172 gtcgagtatagcggcaccaacaacaagaccatggctatatgcacgaacgccaagggcagc 1231
||||| || || |||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 421 gtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgccaagggcagc 480
Query: 1232 accaagggttgcctcaaggagcttgcatgcttctagacc 1270
||| || |||||||||||||| |||||||| ||||||
Sbjct: 481 gccacaggctgcctcaaggagctcgcatgcttttagacc 519
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 670
Score = 507 bits (256), Expect = e-142
Identities = 436/496 (87%)
Strand = Plus / Plus
Query: 775 caccggcgtgacctgcggccctggccacggcatcagcatcggcagcctagggcggtacaa 834
||||||||| || |||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 1 caccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggtacaa 60
Query: 835 ggacgagaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacgatgtt 894
|||||||||||||||||||||||||||||| ||||| || || || ||||||||||
Sbjct: 61 ggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaa 120
Query: 895 cggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatcca 954
|||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 cggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatcca 180
Query: 955 ctacgagaatatcaagatggaggactcagccaaccccatcttcatcgacatgaagtactg 1014
||| ||||| ||||||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 181 ctatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagtactg 240
Query: 1015 ccccaacaagttgtgtactgccaacggcgcctccaaggtcaccgtcaaggacgtcacctt 1074
||| ||||| | || || |||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 241 ccctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctcctt 300
Query: 1075 caagaacatcaccggcacctcctccaccccggaggccgttagcctgctctgcactgccaa 1134
||||||| |||||||||||||| ||| ||| |||||||| |||||||||||| | | |||
Sbjct: 301 caagaacgtcaccggcacctccgccagccccgaggccgtcagcctgctctgctccgacaa 360
Query: 1135 ggtcccatgcaccggcgtcaccatggatgacgtcaacgtcgagtatagcggcaccaacaa 1194
| |||| ||||| ||||||||||||||| ||||||| ||||| || || |||| |||||
Sbjct: 361 gatcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaa 420
Query: 1195 caagaccatggctatatgcacgaacgccaagggcagcaccaagggttgcctcaaggagct 1254
|||||||||||| ||||| ||||||||||||||| ||| || ||||||||||||||
Sbjct: 421 caagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagct 480
Query: 1255 tgcatgcttctagacc 1270
|||||||||||||||
Sbjct: 481 cgcatgcttctagacc 496
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 498 bits (251), Expect = e-139
Identities = 425/483 (87%)
Strand = Plus / Plus
Query: 788 tgcggccctggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggac 847
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9 tgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggac 68
Query: 848 gtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatc 907
||||||||||||||||| ||||| || || || |||||||||| |||| |||| |||
Sbjct: 69 gtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatc 128
Query: 908 aaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatatc 967
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||
Sbjct: 129 aaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacatc 188
Query: 968 aagatggaggactcagccaaccccatcttcatcgacatgaagtactgccccaacaagttg 1027
|||||||||||||| | |||||||| |||||||||||||||||||||| ||||| |
Sbjct: 189 aagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatc 248
Query: 1028 tgtactgccaacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcacc 1087
|| || |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 249 tgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcacc 308
Query: 1088 ggcacctcctccaccccggaggccgttagcctgctctgcactgccaaggtcccatgcacc 1147
||||||||| ||| ||| |||||||| |||||||||||| | | |||| |||| |||||
Sbjct: 309 ggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcact 368
Query: 1148 ggcgtcaccatggatgacgtcaacgtcgagtatagcggcaccaacaacaagaccatggct 1207
||||||||||||||| ||||||| ||||| || || |||| |||||||||||||||||
Sbjct: 369 ggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggcc 428
Query: 1208 atatgcacgaacgccaagggcagcaccaagggttgcctcaaggagcttgcatgcttctag 1267
||||| ||||||||||||||| ||| || |||||||||||||| ||||||||||||
Sbjct: 429 gtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctag 488
Query: 1268 acc 1270
|||
Sbjct: 489 acc 491
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 498 bits (251), Expect = e-139
Identities = 425/483 (87%)
Strand = Plus / Plus
Query: 788 tgcggccctggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggac 847
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6 tgcggccccggccatggcatcagcatcggcagcctggggcggtacaaggacgagaaggac 65
Query: 848 gtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatc 907
||||||||||||||||| ||||| || || || |||||||||| |||| |||| |||
Sbjct: 66 gtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaacggcctccggatc 125
Query: 908 aaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatatc 967
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||
Sbjct: 126 aaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccactatgagaacatc 185
Query: 968 aagatggaggactcagccaaccccatcttcatcgacatgaagtactgccccaacaagttg 1027
|||||||||||||| | |||||||| |||||||||||||||||||||| ||||| |
Sbjct: 186 aagatggaggactcgtcgaaccccattatcatcgacatgaagtactgccctaacaaaatc 245
Query: 1028 tgtactgccaacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcacc 1087
|| || |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 246 tgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttcaagaacgtcacc 305
Query: 1088 ggcacctcctccaccccggaggccgttagcctgctctgcactgccaaggtcccatgcacc 1147
||||||||| ||| ||| |||||||| |||||||||||| | | |||| |||| |||||
Sbjct: 306 ggcacctccgccagccccgaggccgtcagcctgctctgctccgacaagatcccctgcact 365
Query: 1148 ggcgtcaccatggatgacgtcaacgtcgagtatagcggcaccaacaacaagaccatggct 1207
||||||||||||||| ||||||| ||||| || || |||| |||||||||||||||||
Sbjct: 366 ggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaacaagaccatggcc 425
Query: 1208 atatgcacgaacgccaagggcagcaccaagggttgcctcaaggagcttgcatgcttctag 1267
||||| ||||||||||||||| ||| || |||||||||||||| ||||||||||||
Sbjct: 426 gtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctcgcatgcttctag 485
Query: 1268 acc 1270
|||
Sbjct: 486 acc 488
>gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_28_F08_A002 5', mRNA sequence
Length = 539
Score = 490 bits (247), Expect = e-136
Identities = 372/414 (89%), Gaps = 6/414 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 132 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 191
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 192 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 251
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 252 cagacgatcctcatccctaagggcgactacctcgtcggaccgctcaacttcaccggcccg 311
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 312 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 371
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 372 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 425
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 426 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 485
Query: 494 aagtacgactgcaagatccttcccaactcgctggtgatggacttcgtgaacaac 547
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 486 aagtacgactgcaagatcctgcccaactcgctggtgctggactacgtgaacaac 539
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 27 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 69
>gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179g22, DNA
sequence
Length = 403
Score = 480 bits (242), Expect = e-133
Identities = 364/405 (89%), Gaps = 6/405 (1%)
Strand = Plus / Minus
Query: 355 ggcgaccacggacctaagccagtacaaggaccatggtaattggatcgagattctacgcgt 414
||||||||||||||| ||||||||||||| |||| ||||||||||| || || ||
Sbjct: 403 ggcgaccacggacctgagccagtacaagg------gtaactggatcgagatcctgcgtgt 350
Query: 415 ggataacctggtcatcaccggcaagggaaaccttgacgggcagggcccagccgtgtggag 474
||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||||
Sbjct: 349 ggacaacctggtgatcaccggcaaggggaagctcgacgggcagggccccgccgtgtggag 290
Query: 475 caagaactcctgcaccaagaagtacgactgcaagatccttcccaactcgctggtgatgga 534
||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 289 caagaactcgtgcgccaagaagtacgactgcaagatcctgcccaactcgctggtgctgga 230
Query: 535 cttcgtgaacaacggggaggtgtccggggtcacgctgctcaactccaagttcttccacat 594
| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||
Sbjct: 229 gtacgtgaacaacggggaggtgtccgggatcacgctgctaaacgccaagttcttccacat 170
Query: 595 gaacatgtaccggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccgggga 654
|||| ||| || ||||||||||||| |||| ||||| ||||| || ||||||||||||||
Sbjct: 169 gaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccgggga 110
Query: 655 cagccccaacacggatggcatccacatgggcgactcatccgggatcaccatcaccaacac 714
||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 109 cagccccaacacggacggcatccacatgggcgactcgtccggggtcaccatcgagaacac 50
Query: 715 cgtcattggcgtcggcgacgactgcatctccatcggccccgggac 759
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cgtcatcggcgtcggcgacgactgcatctccatcggccccgggac 5
>gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808294, DNA
sequence
Length = 787
Score = 474 bits (239), Expect = e-131
Identities = 407/463 (87%)
Strand = Plus / Minus
Query: 808 cagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaacgtcaa 867
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 787 cagcatcggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaa 728
Query: 868 ggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgaggacgccgc 927
||| || || || |||||||||| |||| |||| |||||||||||||||||||||||
Sbjct: 727 ggactgtacgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgc 668
Query: 928 ctccgtgctcaccgtctccaagatccactacgagaatatcaagatggaggactcagccaa 987
|||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||
Sbjct: 667 ctccgtgctcaccgcctccaagatccactatgagaacatcaagatggaggactcgtcgaa 608
Query: 988 ccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgccaacggcgcctc 1047
|||||| |||||||||||||||||||||| ||||| | || || |||| |||||||||
Sbjct: 607 ccccattatcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctc 548
Query: 1048 caaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccaccccgga 1107
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||
Sbjct: 547 caaggtcaccgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagccccga 488
Query: 1108 ggccgttagcctgctctgcactgccaaggtcccatgcaccggcgtcaccatggatgacgt 1167
|||||| |||||||||||| | | |||| |||| ||||| ||||||||||||||| ||||
Sbjct: 487 ggccgtcagcctgctctgctccgacaagatcccctgcactggcgtcaccatggataacgt 428
Query: 1168 caacgtcgagtatagcggcaccaacaacaagaccatggctatatgcacgaacgccaaggg 1227
||| ||||| || || |||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 427 caaggtcgaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgccaaggg 368
Query: 1228 cagcaccaagggttgcctcaaggagcttgcatgcttctagacc 1270
|||| ||| || |||||||||||||| |||||||||||||||
Sbjct: 367 cagcgccacaggctgcctcaaggagctcgcatgcttctagacc 325
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 464 bits (234), Expect = e-128
Identities = 486/570 (85%)
Strand = Plus / Plus
Query: 557 tccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggac 616
|||||| |||| ||||| |||||||||||||||||||||||| ||| || |||||| | |
Sbjct: 97 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 156
Query: 617 atgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatc 676
|| |||||||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 157 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 216
Query: 677 cacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgac 736
||||| || ||||| ||| | ||||||||||| |||| ||| ||||| || ||||||
Sbjct: 217 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 276
Query: 737 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccct 796
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| ||
Sbjct: 277 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 336
Query: 797 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggac 856
||||||||||||||| |||||||||| || |||||||||| |||||||| || ||||||
Sbjct: 337 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 396
Query: 857 atcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtac 916
|||||||||||||| ||||| || |||||||| | |||||||| |||||| | |||
Sbjct: 397 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 456
Query: 917 gaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggag 976
||||||||||| | |||| |||| | ||||||| ||||||||||||| || |||||
Sbjct: 457 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 516
Query: 977 gactcagccaaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgcc 1036
||| |||||||||||| ||||||||||||||||||||||||||||| | || ||||||
Sbjct: 517 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 576
Query: 1037 aacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1096
|| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 577 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 636
Query: 1097 tccaccccggaggccgttagcctgctctgc 1126
||||||||||||||||| ||||||||||||
Sbjct: 637 tccaccccggaggccgtcagcctgctctgc 666
>gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C04_A002 5', mRNA sequence
Length = 515
Score = 460 bits (232), Expect = e-127
Identities = 351/391 (89%), Gaps = 6/391 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| || || |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 131 gcgtccgggcctggcggatcgttcgacatcagcaagttgggcgcctccggcgacggcaag 190
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 191 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 250
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 251 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 310
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 311 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 370
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 371 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 424
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactcctgcaccaag 493
|||||||| || || |||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 425 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactcgtgcgccaag 484
Query: 494 aagtacgactgcaagatccttcccaactcgc 524
|||||||||||||||||||| ||||||||||
Sbjct: 485 aagtacgactgcaagatcctgcccaactcgc 515
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 26 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 68
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 456 bits (230), Expect = e-126
Identities = 485/570 (85%)
Strand = Plus / Plus
Query: 557 tccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggac 616
|||||| |||| ||||| |||||||||||||||||||||||| ||| || |||||| | |
Sbjct: 100 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 159
Query: 617 atgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatc 676
|| |||||||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 160 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 219
Query: 677 cacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgac 736
||||| || ||||| ||| | ||||||||||| |||| ||| ||||| || ||||||
Sbjct: 220 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 279
Query: 737 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccct 796
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| ||
Sbjct: 280 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 339
Query: 797 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggac 856
||||||||||||||| |||||||||| || |||||||||| |||||||| || ||||||
Sbjct: 340 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 399
Query: 857 atcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtac 916
|||||||||||||| ||||| || |||||||| | |||||||| |||||| | |||
Sbjct: 400 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 459
Query: 917 gaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggag 976
||||||||||| | |||| |||| | ||||||| ||||||||||||| || |||||
Sbjct: 460 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 519
Query: 977 gactcagccaaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgcc 1036
||| |||||||||||| ||||||||||||||||||||||||||||| | || ||||||
Sbjct: 520 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 579
Query: 1037 aacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1096
|| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 580 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 639
Query: 1097 tccaccccggaggccgttagcctgctctgc 1126
||||||||||| ||||| ||||||||||||
Sbjct: 640 tccaccccggaagccgtcagcctgctctgc 669
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 452 bits (228), Expect = e-125
Identities = 486/572 (84%)
Strand = Plus / Plus
Query: 625 caaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatccacatggg 684
||||||||||||||| || ||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 9 caaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatccacattgg 68
Query: 685 cgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgactgcatctc 744
||||| ||| | ||||||||||| |||| ||| ||||| || ||||||||||||||
Sbjct: 69 tgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgactgcatctc 128
Query: 745 catcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccctggccacgg 804
||||||||| || | | || | | ||| |||||||||| |||||||| || ||||||||
Sbjct: 129 catcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggcccggccacgg 188
Query: 805 catcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggacatcaacgt 864
||||||| |||||||||| || |||||||||| |||||||| || ||||||||||||||
Sbjct: 189 catcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggacatcaacgt 248
Query: 865 caaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtacgaggacgc 924
|||||| ||||| || |||||||| | |||||||| |||||| | |||||||||||
Sbjct: 249 caaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctacgaggacgc 308
Query: 925 cgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggaggactcagc 984
||| | |||| |||| | ||||||| ||||||||||||| || ||||| ||| ||
Sbjct: 309 cgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggacgacgtggc 368
Query: 985 caaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgccaacggcgc 1044
|||||||||| ||||||||||||||||||||||||||||| | || |||||||| || |
Sbjct: 369 caaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgccaagggtga 428
Query: 1045 ctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcctccacccc 1104
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 429 ctccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctcatccacccc 488
Query: 1105 ggaggccgttagcctgctctgcactgccaaggtcccatgcaccggcgtcaccatggatga 1164
||||||||| |||||||||||| | | ||| |||| |||| |||||||||||||||| |
Sbjct: 489 ggaggccgtcagcctgctctgctccgacaaaatcccctgcagcggcgtcaccatggataa 548
Query: 1165 cgtcaacgtcgagtatagcggcaccaacaaca 1196
| |||| |||||||| | |||||||||||||
Sbjct: 549 catcaaggtcgagtacaagggcaccaacaaca 580
>gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_73_B09_A002 5', mRNA sequence
Length = 501
Score = 440 bits (222), Expect = e-121
Identities = 342/381 (89%), Gaps = 7/381 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 126 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 185
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 186 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 245
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 246 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 305
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 306 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 365
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 366 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 419
Query: 434 ggcaagggaaaccttgacgggcaggg-cccagccgtgtggagcaagaactcctgcaccaa 492
|||||||| || || ||||||||||| ||| |||||||||||||||||||| ||| ||||
Sbjct: 420 ggcaaggggaagctcgacgggcagggcccccgccgtgtggagcaagaactcgtgcgccaa 479
Query: 493 gaagtacgactgcaagatcct 513
|||||||||||||||||||||
Sbjct: 480 gaagtacgactgcaagatcct 500
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 21 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 63
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 432 bits (218), Expect = e-119
Identities = 467/550 (84%)
Strand = Plus / Plus
Query: 557 tccggggtcacgctgctcaactccaagttcttccacatgaacatgtaccggtgcaaggac 616
|||||| |||| ||||| |||||||||||||||||||||||| ||| || |||||| | |
Sbjct: 25 tccgggatcaccctgctgaactccaagttcttccacatgaacgtgttccagtgcaaaggc 84
Query: 617 atgctgatcaaggacgtgaccgtgacggcgcccggggacagccccaacacggatggcatc 676
|| |||||||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 85 gtgacgatcaaggacgtgaccgtcaccgcgcccggggacagccccaacaccgacggcatc 144
Query: 677 cacatgggcgactcatccgggatcaccatcaccaacaccgtcattggcgtcggcgacgac 736
||||| || ||||| ||| | ||||||||||| |||| ||| ||||| || ||||||
Sbjct: 145 cacattggtgactcctccaaggtcaccatcaccggcaccaccatcggcgtgggtgacgac 204
Query: 737 tgcatctccatcggccccgggacctccaaggtgaacatcaccggcgtgacctgcggccct 796
||||||||||||||||| || | | || | | ||| |||||||||| |||||||| ||
Sbjct: 205 tgcatctccatcggccctggcagcaccgggatcaacgtcaccggcgtcacctgcgggccc 264
Query: 797 ggccacggcatcagcatcggcagcctagggcggtacaaggacgagaaggacgtcacggac 856
||||||||||||||| |||||||||| || |||||||||| |||||||| || ||||||
Sbjct: 265 ggccacggcatcagcgtcggcagcctgggcaggtacaaggatgagaaggatgtgacggac 324
Query: 857 atcaacgtcaaggattgcactcttaagaagacgatgttcggcgtccgcatcaaggcgtac 916
|||||||||||||| ||||| || |||||||| | |||||||| |||||| | |||
Sbjct: 325 atcaacgtcaaggactgcacgctcaagaagaccagcaatggcgtccggatcaagtcctac 384
Query: 917 gaggacgccgcctccgtgctcaccgtctccaagatccactacgagaatatcaagatggag 976
||||||||||| | |||| |||| | ||||||| ||||||||||||| || |||||
Sbjct: 385 gaggacgccgcgtgcgtgatcactgcctccaagctccactacgagaacatagccatggac 444
Query: 977 gactcagccaaccccatcttcatcgacatgaagtactgccccaacaagttgtgtactgcc 1036
||| |||||||||||| ||||||||||||||||||||||||||||| | || ||||||
Sbjct: 445 gacgtggccaaccccatcatcatcgacatgaagtactgccccaacaagatctgcactgcc 504
Query: 1037 aacggcgcctccaaggtcaccgtcaaggacgtcaccttcaagaacatcaccggcacctcc 1096
|| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 aagggtgactccaaggtcaccgtcaaggacgtcacgttcaagaacatcaccggcacctca 564
Query: 1097 tccaccccgg 1106
||||||||||
Sbjct: 565 tccaccccgg 574
>gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_62_A05_A002 3', mRNA sequence
Length = 678
Score = 420 bits (212), Expect = e-115
Identities = 327/363 (90%), Gaps = 2/363 (0%)
Strand = Plus / Plus
Query: 593 atgaacatgtaccggtgcaaggacatgctgatcaaggacgtgaccgtgacggcgcccggg 652
|||||| ||| || ||||||||||||| |||| ||||| ||||| || ||||||||||||
Sbjct: 1 atgaacgtgttccagtgcaaggacatgttgattaaggatgtgacggtcacggcgcccggg 60
Query: 653 gacagccccaac-acggatggcatccacatgggcgactcatccgggatcaccatcaccaa 711
|||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||
Sbjct: 61 gacagccccaacnacggacggcatccacatgggcgactcgtccggggtcaccatcgagaa 120
Query: 712 caccgtcat-tggcgtcggcgacgactgcatctccatcggccccgggacctccaaggtga 770
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 caccgtcatcnggcgtcggcgacgactgcatctccatcggccccgggacaaccaaggtga 180
Query: 771 acatcaccggcgtgacctgcggccctggccacggcatcagcatcggcagcctagggcggt 830
||||||||||||| || |||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 181 acatcaccggcgtcacatgcggccccggccatggcatcagcatcggcagcctggggcggt 240
Query: 831 acaaggacgagaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacga 890
|||||||||||||||||||||||||||||||||| ||||| || || || ||||||||||
Sbjct: 241 acaaggacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacga 300
Query: 891 tgttcggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaaga 950
|||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 gcaacggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaaga 360
Query: 951 tcc 953
|||
Sbjct: 361 tcc 363
Score = 119 bits (60), Expect = 9e-025
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 1131 ccaaggtcccatgcaccggcgtcaccatggatgacgtcaacgtcgagtatagcggcacca 1190
||||| |||| ||||| ||||||||||||||| ||||||| ||||| || || |||| |
Sbjct: 355 ccaagatcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaa 414
Query: 1191 acaacaagaccatggctatatgcacgaacgccaagggcagcaccaagggttgcctcaagg 1250
|||||||||||||||| ||||| ||||||||||||||| ||| || ||||||||||
Sbjct: 415 acaacaagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaagg 474
Query: 1251 agcttgcatgcttctagacc 1270
|||| |||||||||||||||
Sbjct: 475 agctcgcatgcttctagacc 494
>gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_G01_A002 3', mRNA sequence
Length = 709
Score = 418 bits (211), Expect = e-115
Identities = 379/435 (87%)
Strand = Plus / Plus
Query: 836 gacgagaaggacgtcacggacatcaacgtcaaggattgcactcttaagaagacgatgttc 895
||||||||||||||||||||||||||||| ||||| || || || |||||||||| |
Sbjct: 56 gacgagaaggacgtcacggacatcaacgtgaaggactgtacgctgaagaagacgagcaac 115
Query: 896 ggcgtccgcatcaaggcgtacgaggacgccgcctccgtgctcaccgtctccaagatccac 955
||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 116 ggcctccggatcaaggcgtacgaggacgccgcctccgtgctcaccgcctccaagatccac 175
Query: 956 tacgagaatatcaagatggaggactcagccaaccccatcttcatcgacatgaagtactgc 1015
|| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||
Sbjct: 176 tatgagaacatcaagatggaggactcgtcgaaccccattatcatcgacatgaagtactgc 235
Query: 1016 cccaacaagttgtgtactgccaacggcgcctccaaggtcaccgtcaaggacgtcaccttc 1075
|| ||||| | || || |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 236 cctaacaaaatctgcaccgccagcggcgcctccaaggtcaccgtcaaggacgtctccttc 295
Query: 1076 aagaacatcaccggcacctcctccaccccggaggccgttagcctgctctgcactgccaag 1135
||| || |||||||||||||| ||| ||| |||||||| |||||||||||| | | ||||
Sbjct: 296 aaggacgtcaccggcacctccgccagccccgaggccgtcagcctgctctgctccgacaag 355
Query: 1136 gtcccatgcaccggcgtcaccatggatgacgtcaacgtcgagtatagcggcaccaacaac 1195
|||| ||||| ||||||||||||||| ||||||| ||||| || || |||| ||||||
Sbjct: 356 atcccctgcactggcgtcaccatggataacgtcaaggtcgaatacagtggcaaaaacaac 415
Query: 1196 aagaccatggctatatgcacgaacgccaagggcagcaccaagggttgcctcaaggagctt 1255
||||||||||| ||||| ||||||||||||||| ||| || ||||||||||||||
Sbjct: 416 aagaccatggccgtatgccaaaacgccaagggcagcgccacaggctgcctcaaggagctc 475
Query: 1256 gcatgcttctagacc 1270
|||||||||||||||
Sbjct: 476 gcatgcttctagacc 490
Score = 91.7 bits (46), Expect = 2e-016
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 201 gcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaagcagac 258
|||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 1 gcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaagcagac 58
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 410 bits (207), Expect = e-112
Identities = 314/350 (89%), Gaps = 6/350 (1%)
Strand = Plus / Plus
Query: 134 gcgtccgggcctggtgggtccttcgacatcaccaagttgggcgcctccggcaatggcaag 193
|||||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||
Sbjct: 132 gcgtccgggcctggcgggtcgttcgacatcagcaagttgggcgcctccggcgacggcaag 191
Query: 194 acagacagcacgaaggctgtgcaggaggcatgggcatcggcgtgcggcggcactgggaag 253
| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 192 aaggacagcacgaaggctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaag 251
Query: 254 cagacaatcctcatacccaagggcgacttccttgtcggacaactcaacttcacaggccct 313
||||| |||||||| || |||||||||| ||| ||||||| |||||||||||| |||||
Sbjct: 252 cagacgatcctcatccctaagggcgactacctcgtcggaccactcaacttcaccggcccg 311
Query: 314 tgcaagggcgacgtgaccatccaggtggatggcaatctgctggcgaccacggacctaagc 373
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 312 tgcaagggcgacgtgaccatccaggtggacggcaatctgctggcgaccacggacctgagc 371
Query: 374 cagtacaaggaccatggtaattggatcgagattctacgcgtggataacctggtcatcacc 433
||||||||| ||||| ||||||||||| || || ||||| |||||||| ||||||
Sbjct: 372 cagtacaag------ggtaactggatcgagatcctgcgtgtggacaacctggtgatcacc 425
Query: 434 ggcaagggaaaccttgacgggcagggcccagccgtgtggagcaagaactc 483
|||||||| || || |||||||||||||| ||||||||||||||||||||
Sbjct: 426 ggcaaggggaagctcgacgggcagggccccgccgtgtggagcaagaactc 475
Score = 385 bits (194), Expect = e-105
Identities = 272/298 (91%)
Strand = Plus / Plus
Query: 518 aactcgctggtgatggacttcgtgaacaacggggaggtgtccggggtcacgctgctcaac 577
|||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||
Sbjct: 471 aactcgctggtgctggactacgtgaacaacggggaggtgtccgggatcacgctgctaaac 530
Query: 578 tccaagttcttccacatgaacatgtaccggtgcaaggacatgctgatcaaggacgtgacc 637
|||||||||||||||||||| ||| || ||||||||||||| |||| ||||| |||||
Sbjct: 531 gccaagttcttccacatgaacgtgttccagtgcaaggacatgttgattaaggatgtgacg 590
Query: 638 gtgacggcgcccggggacagccccaacacggatggcatccacatgggcgactcatccggg 697
|| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 591 gtcacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtccggg 650
Query: 698 atcaccatcaccaacaccgtcattggcgtcggcgacgactgcatctccatcggccccggg 757
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcatctccatcggccccggg 710
Query: 758 acctccaaggtgaacatcaccggcgtgacctgcggccctggccacggcatcagcatcg 815
|| |||||||||||||||||||||| || |||||||| ||||| |||||||||||||
Sbjct: 711 acaaccaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagcatcg 768
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 35 atggcgtgcacaaacaatgcgatgagagccttgttcctcctgg 77
|||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 27 atggcgtgcacaggcaatgcgatgagagccttcttcctcctgg 69
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 458,024
Number of Sequences: 832831
Number of extensions: 458024
Number of successful extensions: 127057
Number of sequences better than 0.5: 177
Number of HSP's better than 0.5 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126248
Number of HSP's gapped (non-prelim): 713
length of query: 1628
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1608
effective length of database: 474,703,049
effective search space: 763322502792
effective search space used: 763322502792
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)