BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated ... 971 0.0
gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum b... 952 0.0
gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated ... 940 0.0
gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots S... 940 0.0
gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stres... 938 0.0
gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots S... 930 0.0
gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum b... 906 0.0
gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stres... 906 0.0
gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum b... 882 0.0
gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cD... 878 0.0
gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves... 868 0.0
gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stresse... 864 0.0
gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1... 831 0.0
gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1... 831 0.0
gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Me... 815 0.0
gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Me... 749 0.0
gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seed... 745 0.0
gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seed... 745 0.0
gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum b... 680 0.0
gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Me... 664 0.0
gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (L... 620 e-176
gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorgh... 613 e-173
gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation... 613 e-173
gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum ... 609 e-172
gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Me... 603 e-170
gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation... 595 e-168
gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sor... 547 e-154
gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (L... 531 e-149
gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 ... 531 e-149
gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots S... 531 e-149
gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots S... 531 e-149
gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (L... 527 e-148
gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stresse... 527 e-148
gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1... 511 e-143
gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stresse... 486 e-135
gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) So... 476 e-132
gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 ... 464 e-129
gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorg... 454 e-126
gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stresse... 400 e-110
gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (L... 392 e-107
gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stresse... 392 e-107
gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1... 383 e-104
gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2)... 369 e-100
gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cD... 307 9e-082
gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1... 287 8e-076
gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (L... 285 3e-075
gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2... 276 3e-072
gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorgh... 268 8e-070
gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorgh... 268 8e-070
gb|CW285308.1|CW285308 104_762_11410262_116_35504_055 Sorgh... 260 2e-067
gb|CW246228.1|CW246228 104_707_11221254_116_35083_029 Sorgh... 252 5e-065
gb|CF772635.1|CF772635 DSBF1_37_E06.g1_A010 Drought-stresse... 250 2e-064
gb|CW029921.1|CW029921 104_257_10499952_114_30401 Sorghum m... 165 8e-039
gb|CW107572.1|CW107572 104_477_11096667_148_34472_002 Sorgh... 165 8e-039
gb|CW169777.1|CW169777 104_579_11154850_116_36506_033 Sorgh... 165 8e-039
gb|CW169899.1|CW169899 104_580_11154914_116_36512_013 Sorgh... 165 8e-039
gb|CW214124.1|CW214124 104_646_11193850_116_37049_047 Sorgh... 165 8e-039
gb|CW230230.1|CW230230 104_671_11207738_148_37266_001 Sorgh... 165 8e-039
gb|CW468548.1|CW468548 fsbb001f220m18f0 Sorghum methylation... 165 8e-039
gb|CW496453.1|CW496453 fsbb001f288l12f0 Sorghum methylation... 165 8e-039
gb|BG053886.1|BG053886 RHIZ2_11_B10.b1_A003 Rhizome2 (RHIZ2... 165 8e-039
gb|CW186439.1|CW186439 104_604_11166568_148_36711_058 Sorgh... 161 1e-037
gb|BZ781493.1|BZ781493 ii30a02.g1 WGS-SbicolorF (DH5a methy... 153 3e-035
gb|CL173970.1|CL173970 104_377_10891239_148_31792_375 Sorgh... 153 3e-035
gb|CW089548.1|CW089548 104_435_10948774_114_32612_095 Sorgh... 153 3e-035
gb|CW154611.1|CW154611 104_556_11145692_116_36354_068 Sorgh... 153 3e-035
gb|CW154612.1|CW154612 104_556_11145692_148_36353_068 Sorgh... 153 3e-035
gb|CW244794.1|CW244794 104_705_11220802_148_37591_033 Sorgh... 153 3e-035
gb|CW286289.1|CW286289 104_763_11410798_116_35512_081 Sorgh... 153 3e-035
gb|CD230975.1|CD230975 SS1_7_B05.b1_A012 Salt-stressed seed... 149 5e-034
gb|CW214125.1|CW214125 104_646_11193850_148_37053_047 Sorgh... 127 2e-027
gb|CL183381.1|CL183381 104_395_10898134_114_31917_358 Sorgh... 125 7e-027
gb|CL183382.1|CL183382 104_395_10898134_116_31918_358 Sorgh... 103 3e-020
gb|CW140199.1|CW140199 104_530_11135655_148_34918_054 Sorgh... 103 3e-020
gb|CL166028.1|CL166028 104_361_10809074_116_31821_290 Sorgh... 100 4e-019
gb|BE594316.1|BE594316 WS1_104_H03.b1_A002 Water-stressed 1... 98 2e-018
gb|CL173969.1|CL173969 104_377_10891239_116_31793_375 Sorgh... 96 6e-018
gb|CW089549.1|CW089549 104_435_10948774_116_32613_095 Sorgh... 96 6e-018
gb|CW244793.1|CW244793 104_705_11220802_116_37592_033 Sorgh... 96 6e-018
gb|CW286290.1|CW286290 104_763_11410798_148_35645_081 Sorgh... 90 4e-016
gb|CW395806.1|CW395806 fsbb001f083p22f0 Sorghum methylation... 90 4e-016
gb|CF488931.1|CF488931 POL1_53_C12.b1_A002 Pollen Sorghum b... 86 6e-015
gb|CW032064.1|CW032064 104_260_10501160_114_30365 Sorghum m... 80 4e-013
gb|CW160978.1|CW160978 104_567_11150166_148_36508_019 Sorgh... 80 4e-013
gb|BE596516.1|BE596516 PI1_57_B11.b1_A002 Pathogen induced ... 80 4e-013
gb|CD223548.1|CD223548 CCC1_28_E04.g1_A007 Callus culture/c... 80 4e-013
gb|CD225779.1|CD225779 CCC1_41_D01.g1_A007 Callus culture/c... 80 4e-013
gb|CD462876.1|CD462876 ETH1_40_D03.g2_A002 Ethylene-treated... 56 5e-006
gb|CN148759.1|CN148759 WOUND1_58_D02.g1_A002 Wounded leaves... 56 5e-006
gb|CL160730.1|CL160730 104_351_10805192_116_31825_248 Sorgh... 50 3e-004
gb|CW432272.1|CW432272 fsbb001f146o06f0 Sorghum methylation... 44 0.021
gb|CW107905.1|CW107905 104_478_11096855_148_34481_090 Sorgh... 42 0.082
gb|CW215736.1|CW215736 104_648_11194707_148_37114_012 Sorgh... 42 0.082
gb|CW251009.1|CW251009 104_713_11223696_148_35061_090 Sorgh... 42 0.082
gb|CW297759.1|CW297759 104_780_11462211_116_35646_014 Sorgh... 42 0.082
gb|CW426072.1|CW426072 fsbb001f137e21f0 Sorghum methylation... 42 0.082
>gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 3', mRNA sequence
Length = 662
Score = 971 bits (490), Expect = 0.0
Identities = 605/641 (94%), Gaps = 3/641 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 4 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 63
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 64 aggacgttccgcaagtacagctaccgtggcgtcgaccttgatgcgctgctcgacatgtcc 123
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 124 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 183
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 184 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 243
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 244 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 303
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 363
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 364 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 423
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 424 aggcccggtatcggtgccacccactcgtcgcggtttatccccctgaaatgagttgttacc 483
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 484 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 541
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 542 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagcta 600
Query: 759 agcattgcataactatgctgttttgttggaagtatgtgagt 799
||||||||| || ||||||||||||||||||||||||||||
Sbjct: 601 agcattgcacaattatgctgttttgttggaagtatgtgagt 641
>gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 5', mRNA sequence
Length = 700
Score = 952 bits (480), Expect = 0.0
Identities = 592/627 (94%), Gaps = 3/627 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 77 acttcaaccatggcggacgtcggtgtggagcctgaggtcgccgccggcgctcccaagaag 136
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 137 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 196
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 197 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 256
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 257 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 316
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 317 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 376
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 436
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 437 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 496
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 497 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 556
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 557 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 614
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 615 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagcta 673
Query: 759 agcattgcataactatgctgttttgtt 785
||||||||| || ||||||||||||||
Sbjct: 674 agcattgcacaattatgctgttttgtt 700
>gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 5', mRNA sequence
Length = 724
Score = 940 bits (474), Expect = 0.0
Identities = 592/629 (94%), Gaps = 3/629 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 99 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 158
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 159 aggacgttccgcaagtacagctaccgtggcgtcgaccttgatgcgctgctcgacatgtcc 218
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 219 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 278
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 279 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 338
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 339 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 398
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 458
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 459 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 518
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 519 aggcccggtatcggtgccacccactcgtcgcggtttatccccctgaaatgagttgttacc 578
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 579 cagatctgtagtgtcccaagg--gttcagtggcattggtctttcagcttttctacttgtt 636
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 637 ttgaacaagttacataccccagacattttgttctg-ttccagccctagaattcaaagcta 695
Query: 759 agcattgcataactatgctgttttgttgg 787
||||||||| || ||||||||||||||||
Sbjct: 696 agcattgcacaattatgctgttttgttgg 724
>gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 5', mRNA sequence
Length = 703
Score = 940 bits (474), Expect = 0.0
Identities = 577/609 (94%), Gaps = 3/609 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 79 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 138
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 139 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 198
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 199 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 258
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 259 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 318
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 319 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 378
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 438
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 439 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 498
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 558
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 559 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 616
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 617 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagcta 675
Query: 759 agcattgca 767
|||||||||
Sbjct: 676 agcattgca 684
>gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 5', mRNA sequence
Length = 749
Score = 938 bits (473), Expect = 0.0
Identities = 595/632 (94%), Gaps = 4/632 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 108 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 167
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 168 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 227
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 228 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 287
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 288 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 347
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 348 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 407
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 attggaagcattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 467
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 468 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 527
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 528 aggcccggtatcggtgccacccactcgtcgtggtttatccctctgaaatgagttgttacc 587
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 588 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 645
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 646 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagcta 704
Query: 759 agcattgcataactatgct-gttttgttggaa 789
||||||||| || |||||| ||||||||||||
Sbjct: 705 agcattgcacaattatgctggttttgttggaa 736
>gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 3', mRNA sequence
Length = 662
Score = 930 bits (469), Expect = 0.0
Identities = 575/608 (94%), Gaps = 3/608 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 58 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 117
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 118 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 177
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 178 accgacgacctcgtccagttcttccccgcgcgcgccaggagaaggttccagaggggtttg 237
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 238 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 297
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 298 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 357
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 417
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 418 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 477
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 478 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 537
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 538 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 595
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagcta 758
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 596 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagcta 654
Query: 759 agcattgc 766
||||||||
Sbjct: 655 agcattgc 662
>gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 3', mRNA sequence
Length = 589
Score = 906 bits (457), Expect = 0.0
Identities = 560/592 (94%), Gaps = 3/592 (0%)
Strand = Plus / Plus
Query: 199 ccgccggtgctcccaagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcg 258
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ccgccggcgctcccaagaagaggacgttccgcaagtacagctaccgtggcgtcgacctcg 60
Query: 259 atgcgctgcttgacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccagga 318
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 atgcgctgctcgacatgtccaccgacgacctcgtccagctcttccccgcgcgcgccagga 120
Query: 319 gaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaagg 378
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 121 gaaggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaagg 180
Query: 379 cgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaaca 438
|||||||||||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaaca 240
Query: 439 tgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttca 498
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttca 300
Query: 499 accaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 accaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctcct 360
Query: 559 acaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatcc 618
||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 361 acaagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatcc 420
Query: 619 ctctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccc 678
||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |
Sbjct: 421 ctctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgttc 478
Query: 679 tttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttcc 738
|||||||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 479 tttcagcttttctacttgttttgaacaagttacatacccaagacattttgttctg-ttcc 537
Query: 739 agcactagatttcaaagctaagcattgcataactatgctgttttgttggaag 790
||| ||||| ||||||||||||||||||| || |||||||||||||||||||
Sbjct: 538 agccctagaattcaaagctaagcattgcacaattatgctgttttgttggaag 589
>gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 3', mRNA sequence
Length = 603
Score = 906 bits (457), Expect = 0.0
Identities = 569/604 (94%), Gaps = 3/604 (0%)
Strand = Plus / Plus
Query: 181 atgtggagccggaggtcgccgccggtgctcccaagaagaggacgttccgcaagtacagct 240
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccgcaagtacagct 60
Query: 241 accgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgacctcgtccagctct 300
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 accgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacctcgtccagctct 120
Query: 301 tcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaagcccatggcgctca 360
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 121 tccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctca 180
Query: 361 tcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtga 420
|||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 181 tcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtga 240
Query: 421 agacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtct 480
||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 241 agacccatctccgcaacatgatcattgtccctgagatgattggaagcattgtcggtgtct 300
Query: 481 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 360
Query: 541 cagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactc 600
||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct: 361 cagagttctccatctcctacaagccagtcaagcacggtaggcccggtatcggtgccaccc 420
Query: 601 actcctcgcggtttatccctctgaaatgagttgttacccagatctgtagcgtcccaaggg 660
|||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 actcgtcgtggtttatccctctgaaatgagttgttacccagatctgtagtgtcccaagg- 479
Query: 661 tgtccagtggcattgccctttcagctttgctgcttgtttcgaacaagttacatacccaag 720
|| ||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 480 -gttcagtggcattgttctttcagcttttctacttgttttgaacaagttacatacccaag 538
Query: 721 acattttgttctgtttccagcactagatttcaaagctaagcattgcataactatgctgtt 780
||||||||||||| ||||||| ||||| ||||||||||||||||||| || |||||||||
Sbjct: 539 acattttgttctg-ttccagccctagaattcaaagctaagcattgcacaattatgctgtt 597
Query: 781 ttgt 784
||||
Sbjct: 598 ttgt 601
>gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_53_C12_A002 5', mRNA sequence
Length = 635
Score = 882 bits (445), Expect = 0.0
Identities = 561/596 (94%), Gaps = 4/596 (0%)
Strand = Plus / Minus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 592 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 533
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 532 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 473
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 472 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 413
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
||| |||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 412 aaggggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 353
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 352 ggtgagaagccagagccagtgaagacccatctccgcaaca-catcattgtccctgagatg 294
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 234
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 233 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 174
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 173 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 114
Query: 639 cagatctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtt 698
||||||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 113 cagatctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgtt 56
Query: 699 tcgaacaagttacatacccaagacattttgttctgtttccagcactagatttcaaa 754
| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 55 ttgaacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaa 1
>gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1098, mRNA sequence
Length = 607
Score = 878 bits (443), Expect = 0.0
Identities = 559/594 (94%), Gaps = 4/594 (0%)
Strand = Plus / Plus
Query: 207 gctcccaagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctg 266
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9 gctcccaagaagaggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctg 68
Query: 267 cttgacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttc 326
|| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 69 ctcgacatgtccaccgacgaccttgttcagctcttccccgcgcgcgccaggagaaggttc 128
Query: 327 cagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaag 386
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 129 cagaggggtttgaagaggaagccgatggccctcatcaagaagctgcgcaaggcgaaaaaa 188
Query: 387 gatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcatt 446
|||||||| | || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 189 gatgctccagctggtgagaagccagagccagtgaagacccatcttcgcaacatgatcatt 248
Query: 447 gtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggtt 506
||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 249 gtccctgagatgattggaagcatcgtcggtgtctacaatggcaagaccttcaaccaggtt 308
Query: 507 gagatcaagcctgagatgattggccactatcttgcagagttctccatttcctacaagccg 566
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 309 gagatcaagcctgagatgattggccactatcttgcagagttctccatctcctacaagccg 368
Query: 567 gtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaa 626
||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 369 gtcaagcacggtaggcccggtattggtgccacccactcgtcgcggtttatccctctgaaa 428
Query: 627 tgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccctttcagct 686
||||||||||||||||||||||| ||||||||| || ||||||||||| ||||||||||
Sbjct: 429 tgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgtcctttcagct 486
Query: 687 ttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttccagcactag 746
||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 487 ttgctacttgttttgaacaagttatatacccaagacattttgttctg-ttccagccctag 545
Query: 747 atttcaaagctaagcattgcataa-ctatgctgttttgttggaagtatgtgagt 799
| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 546 aattcaaagctaagcattgcacaatttatgctgttttgttggaagtatgtgagt 599
>gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_D02_A002 3', mRNA sequence
Length = 735
Score = 868 bits (438), Expect = 0.0
Identities = 544/577 (94%), Gaps = 3/577 (0%)
Strand = Plus / Plus
Query: 223 cgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccg 282
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 151 cgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccg 210
Query: 283 acgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaaga 342
| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 211 aggacctcgtccagcttttccccgcgcgcgccaggagaaggttccagaggggtttgaaga 270
Query: 343 ggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcg 402
|||| || |||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct: 271 ggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctggtg 330
Query: 403 agaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattg 462
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 331 agaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgattg 390
Query: 463 ggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgaga 522
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgaga 450
Query: 523 tgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggc 582
||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 451 tgattggccactaccttgcagagttctccatctcctacaagccagtcaagcacggtaggc 510
Query: 583 ccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacccaga 642
||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacccaga 570
Query: 643 tctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtttcga 702
||||||| ||||||||| |||||||||||||| ||||||||||| || ||||||| ||
Sbjct: 571 tctgtagtgtcccaagg--gtccagtggcattgttctttcagcttttctacttgttttga 628
Query: 703 acaagttacatacccaagacattttgttctgtttccagcactagatttcaaagctaagca 762
||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 629 acaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagctaagca 687
Query: 763 ttgcataactatgctgttttgttggaagtatgtgagt 799
||||| || ||||||||||||||||||||||||||||
Sbjct: 688 ttgcacaattatgctgttttgttggaagtatgtgagt 724
>gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_18_F09_A011 3', mRNA sequence
Length = 572
Score = 864 bits (436), Expect = 0.0
Identities = 531/560 (94%), Gaps = 2/560 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 14 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 73
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 74 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 133
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 134 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 193
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 194 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 253
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 254 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 313
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 373
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 374 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 433
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 434 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 493
Query: 639 cag-atctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgt 697
||| |||||||| ||||||||||| | ||||||||||| ||||||||||| || |||||
Sbjct: 494 cagtatctgtagtgtcccaagggt-tacagtggcattgttctttcagcttttctacttgt 552
Query: 698 ttcgaacaagttacataccc 717
|| |||||||||||||||||
Sbjct: 553 tttgaacaagttacataccc 572
>gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 545
Score = 831 bits (419), Expect = 0.0
Identities = 482/503 (95%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 24 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 83
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 84 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 143
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 144 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 203
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 263
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 323
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 383
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 384 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 443
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 503
Query: 639 cagatctgtagcgtcccaagggt 661
||||||||||| |||||||||||
Sbjct: 504 cagatctgtagtgtcccaagggt 526
>gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 831 bits (419), Expect = 0.0
Identities = 482/503 (95%)
Strand = Plus / Plus
Query: 159 acttcaaacatggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaag 218
||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2 acttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaag 61
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 62 aggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtcc 121
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 122 accgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttg 181
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 182 aagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagct 241
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 242 ggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatg 301
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 attggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 361
Query: 519 gagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacggg 578
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 362 gagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggt 421
Query: 579 aggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacc 638
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 422 aggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacc 481
Query: 639 cagatctgtagcgtcccaagggt 661
||||||||||| |||||||||||
Sbjct: 482 cagatctgtagtgtcccaagggt 504
>gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 583
Score = 815 bits (411), Expect = 0.0
Identities = 546/586 (93%), Gaps = 5/586 (0%)
Strand = Plus / Plus
Query: 260 tgcgctgcttgacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggag 319
||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1 tgcgctgctcgacatgtccaccgacgaccttgtccagctcttccccgcgcgcgccaggag 60
Query: 320 aaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggc 379
|||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 61 aaggttccagaggggttt-aagaggaagccgatggccctcatcaagaagctgcgcaaggc 119
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||| |||||||| | || ||||||||||||||||||||||||||||| ||||||||
Sbjct: 120 gaaaaaagatgctccagctggtgagaagccagagccagtgaagacccatcttcgcaacat 179
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 180 gatcattgtccctgagatgattggaagcattgtcggtgtctacaatggcaagaccttcaa 239
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 299
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
|||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 300 caagccggtcaagcacggtaggcccggtattggtgccacccactcgtcgcggtttatccc 359
Query: 620 tctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccct 679
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |||
Sbjct: 360 tctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgtcct 417
Query: 680 ttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttcca 739
|||||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||
Sbjct: 418 ttcagctttgctacttgttttgaacaagttatatacccaagacattttgttctg-ttcca 476
Query: 740 gcactagatttcaaagctaagcattgcataa-ctatgctgttttgttggaagtatgtgag 798
|| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 477 gccctagaattcaaagctaagcattgcacaatttatgctgttttgttggaagtatgtgag 536
Query: 799 tataatcttatctaatatgtgatgttacgttctttgttgtttcctt 844
| ||| ||||||| |||||||| || ||||||||||||||||||
Sbjct: 537 ttatatcgtatctaagatgtgatgctatgttctttgttgtttcctt 582
>gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 538
Score = 749 bits (378), Expect = 0.0
Identities = 497/533 (93%), Gaps = 4/533 (0%)
Strand = Plus / Plus
Query: 312 gccaggagaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctg 371
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 gccaggagaaggttccagaggggtttgaagaggaagccgatggccctcatcaagaagctg 60
Query: 372 cgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctc 431
|||||||||||||| |||||||| | || |||||||||||||||||||||||||||||
Sbjct: 61 cgcaaggcgaaaaaagatgctccagctggtgagaagccagagccagtgaagacccatctt 120
Query: 432 cgcaacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaag 491
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 121 cgcaacatgatcattgtccctgagatgattggaagcattgtcggtgtctacaatggcaag 180
Query: 492 accttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctcc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctcc 240
Query: 552 atttcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcgg 611
|| ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 241 atctcctacaagccggtcaagcacggtaggcccggtattggtgccacccactcgtcgcgg 300
Query: 612 tttatccctctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggc 671
|||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 301 tttatccctctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggc 358
Query: 672 attgccctttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttc 731
|||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||
Sbjct: 359 attgtcctttcagctttgctacttgttttgaacaagttatatacccaagacattttgttc 418
Query: 732 tgtttccagcactagatttcaaagctaagcattgcataa-ctatgctgttttgttggaag 790
|| ||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||
Sbjct: 419 tg-ttccagccctagaattcaaagctaagcattgcacaatttatgctgttttgttggaag 477
Query: 791 tatgtgagtataatcttatctaatatgtgatgttacgttctttgttgtttcct 843
||||||||| ||| ||||||| |||||||| || |||||||||||||||||
Sbjct: 478 tatgtgagttatatcgtatctaagatgtgatgctatgttctttgttgtttcct 530
>gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 3', mRNA sequence
Length = 503
Score = 745 bits (376), Expect = 0.0
Identities = 464/491 (94%), Gaps = 3/491 (0%)
Strand = Plus / Plus
Query: 309 cgcgccaggagaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaag 368
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 cgcgccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaag 60
Query: 369 ctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccat 428
|||||||||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct: 61 ctgcgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtgaagacccat 120
Query: 429 ctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggc 488
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 121 ctccgcaacatgatcattgtccctgagatgattggaagcattgttggtgtctacaatggc 180
Query: 489 aagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttc 240
Query: 549 tccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcg 608
||||| ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 241 tccatctcctacaagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcg 300
Query: 609 cggtttatccctctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagt 668
||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 301 cggtttatccctctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagt 358
Query: 669 ggcattgccctttcagctttgctgcttgtttcgaacaagttacatacccaagacattttg 728
||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 359 ggcattgttctttcagctttgctacttgttttgaacaagttacatacccaagacattttg 418
Query: 729 ttctgtttccagcactagatttcaaagctaagcattgcataactatgctgttttgttgga 788
||||| ||||||| ||||| ||||||||||||||||||| || |||||||||||||||||
Sbjct: 419 ttctg-ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttgga 477
Query: 789 agtatgtgagt 799
|||||||||||
Sbjct: 478 agtatgtgagt 488
>gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 5', mRNA sequence
Length = 543
Score = 745 bits (376), Expect = 0.0
Identities = 443/464 (95%), Gaps = 1/464 (0%)
Strand = Plus / Plus
Query: 159 acttcaaacatgg-cggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaa 217
||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 80 acttcaaccatggacggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaa 139
Query: 218 gaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtc 277
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 140 gaggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtc 199
Query: 278 caccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggttt 337
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 200 caccgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggttt 259
Query: 338 gaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgt 397
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 gaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagc 319
Query: 398 cggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagat 457
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 tggtgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagat 379
Query: 458 gattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcc 517
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gattggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcc 439
Query: 518 tgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgg 577
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 440 tgagatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacgg 499
Query: 578 gaggcccggtattggtgccactcactcctcgcggtttatccctc 621
||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 500 taggcccggtatcggtgccacccactcgtcgcggtttatccctc 543
>gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_75_G03_A002 3', mRNA sequence
Length = 465
Score = 680 bits (343), Expect = 0.0
Identities = 437/466 (93%), Gaps = 3/466 (0%)
Strand = Plus / Plus
Query: 301 tcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaagcccatggcgctca 360
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 tccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctca 60
Query: 361 tcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtga 420
|||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 61 tcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtga 120
Query: 421 agacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtct 480
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 121 agacccatctccgcaacatgatcattgtccctgagatgattggaagcattgttggtgtct 180
Query: 481 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 240
Query: 541 cagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactc 600
||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct: 241 cagagttctccatctcttacaagccagtcaagcacggtaggcccggtatcggtgccaccc 300
Query: 601 actcctcgcggtttatccctctgaaatgagttgttacccagatctgtagcgtcccaaggg 660
|||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 actcgtcgcggtttatccttctgaaatgagttgttacccagatctgtagtgtcccaagg- 359
Query: 661 tgtccagtggcattgccctttcagctttgctgcttgtttcgaacaagttacatacccaag 720
|| ||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||
Sbjct: 360 -gttcagtggcattgttctttcagcttttctacttgttttgaacaagttacatacccaag 418
Query: 721 acattttgttctgtttccagcactagatttcaaagctaagcattgc 766
||||||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 419 acattttgttctg-ttccagccctagaattcaaagctaagcattgc 463
>gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 484
Score = 664 bits (335), Expect = 0.0
Identities = 386/403 (95%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 82 catggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgtt 141
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgctcgacatgtccaccgacga 201
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccttgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaa 261
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
||| ||||| ||||||||||||||||||||||||||||| |||||||| | || |||||
Sbjct: 262 gccgatggccctcatcaagaagctgcgcaaggcgaaaaaagatgctccagctggtgagaa 321
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 322 gccagagccagtgaagacccatcttcgcaacatgatcattgtccctgagatgattggaag 381
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 441
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtc 569
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 442 tggccactatcttgcagagttctccatctcctacaagccggtc 484
>gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 620 bits (313), Expect = e-176
Identities = 395/420 (94%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 165
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 166 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 225
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 285
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
|||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 286 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 345
Query: 620 tctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccct 679
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||
Sbjct: 346 tctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgttct 403
Query: 680 ttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttcca 739
||||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 404 ttcagcttttctacttgttttgaacaagttacatacccaagacattttgttctg-ttcca 462
Query: 740 gcactagatttcaaagctaagcattgcataactatgctgttttgttggaagtatgtgagt 799
|| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 463 gccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatgtgagt 522
>gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136334, DNA
sequence
Length = 665
Score = 613 bits (309), Expect = e-173
Identities = 394/420 (93%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 99
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 100 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 159
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 160 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 219
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
|||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 220 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 279
Query: 620 tctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccct 679
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||
Sbjct: 280 tctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgttct 337
Query: 680 ttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttcca 739
||||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 338 ttcagcttttctacttgttttgaacaagttacatacccaagacattttgttctg-ttcca 396
Query: 740 gcactagatttcaaagctaagcattgcataactatgctgttttgttggaagtatgtgagt 799
|| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 397 gccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatgtgagt 456
>gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 649
Score = 613 bits (309), Expect = e-173
Identities = 394/420 (93%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 150
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 151 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 210
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 211 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 270
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
|||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 271 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 330
Query: 620 tctgaaatgagttgttacccagatctgtagcgtcccaagggtgtccagtggcattgccct 679
|||||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||
Sbjct: 331 tctgaaatgagttgttacccagatctgtagtgtcccaagg--gttcagtggcattgttct 388
Query: 680 ttcagctttgctgcttgtttcgaacaagttacatacccaagacattttgttctgtttcca 739
||||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 389 ttcagcttttctacttgttttgaacaagttacatacccaagacattttgttctg-ttcca 447
Query: 740 gcactagatttcaaagctaagcattgcataactatgctgttttgttggaagtatgtgagt 799
|| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 448 gccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatgtgagt 507
>gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 464
Score = 609 bits (307), Expect = e-172
Identities = 377/398 (94%), Gaps = 3/398 (0%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 449 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgatt 390
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 330
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 329 atgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtagg 270
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacccag 641
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 269 cccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacccag 210
Query: 642 atctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtttcg 701
|||||||| ||||||||| || ||||||||||| |||||||||||||| ||||||| |
Sbjct: 209 atctgtagtgtcccaagg--gttcagtggcattgttctttcagctttgctacttgttttg 152
Query: 702 aacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagctaagc 761
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 151 aacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagctaagc 93
Query: 762 attgcataactatgctgttttgttggaagtatgtgagt 799
|||||| || ||||||||||||||||||||||||||||
Sbjct: 92 attgcacaattatgctgttttgttggaagtatgtgagt 55
>gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 449
Score = 603 bits (304), Expect = e-170
Identities = 352/368 (95%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 82 catggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgtt 141
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgctcgacatgtccaccgacga 201
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccttgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaa 261
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
||| ||||| ||||||||||||||||||||||||||||| |||||||| | || |||||
Sbjct: 262 gccgatggccctcatcaagaagctgcgcaaggcgaaaaaagatgctccagctggtgagaa 321
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 322 gccagagccagtgaagacccatcttcgcaacatgatcattgtccctgagatgattggaag 381
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 441
Query: 527 tggccact 534
||||||||
Sbjct: 442 tggccact 449
>gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 673
Score = 595 bits (300), Expect = e-168
Identities = 375/398 (94%), Gaps = 3/398 (0%)
Strand = Plus / Minus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 672 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgatt 613
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 612 ggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcntgag 553
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 552 atgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtagg 493
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctctgaaatgagttgttacccag 641
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 492 cccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgagttgttacccag 433
Query: 642 atctgtagcgtcccaagggtgtccagtggcattgccctttcagctttgctgcttgtttcg 701
|||||||| ||||||||| || ||||||||||| ||||||||||| || ||||||| |
Sbjct: 432 atctgtagtgtcccaagg--gttcagtggcattgttctttcagcttttctacttgttttg 375
Query: 702 aacaagttacatacccaagacattttgttctgtttccagcactagatttcaaagctaagc 761
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 374 aacaagttacatacccaagacattttgttctg-ttccagccctagaattcaaagctaagc 316
Query: 762 attgcataactatgctgttttgttggaagtatgtgagt 799
|||||| || ||||||||||||||||||||||||||||
Sbjct: 315 attgcacaattatgctgttttgttggaagtatgtgagt 278
>gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 547 bits (276), Expect = e-154
Identities = 324/340 (95%)
Strand = Plus / Plus
Query: 322 ggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcga 381
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1 ggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcga 60
Query: 382 aaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatga 441
|||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaagggtgctccagctggtgagaagccagagccagtgaagacccatctccgcaacatga 120
Query: 442 tcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaacc 501
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaacc 180
Query: 502 aggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcctaca 561
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 aggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctcctaca 240
Query: 562 agccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccctc 621
|||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 241 agccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccctc 300
Query: 622 tgaaatgagttgttacccagatctgtagcgtcccaagggt 661
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 tgaaatgagttgttacccagatctgtagtgtcccaagggt 340
>gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 531 bits (268), Expect = e-149
Identities = 415/464 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||| ||||||||
Sbjct: 66 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaaaaggacgtt 125
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 126 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 185
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 186 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 245
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | ||| |||||
Sbjct: 246 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaa 305
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 306 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 365
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 366 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgat 425
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||||||||| || |||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 426 tggccactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccgg 485
Query: 587 tattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 486 tatcggtgctacccactcttcgcggttcattcctctgaagtgag 529
>gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 531 bits (268), Expect = e-149
Identities = 415/464 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||| ||||||||
Sbjct: 78 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaaaaggacgtt 137
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 138 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 197
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 198 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 257
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | ||| |||||
Sbjct: 258 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaa 317
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 318 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 377
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 378 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgat 437
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||||||||| || |||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 438 tggccactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccgg 497
Query: 587 tattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 498 tatcggtgctacccactcttcgcggttcattcctctgaagtgag 541
>gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 3', mRNA sequence
Length = 690
Score = 531 bits (268), Expect = e-149
Identities = 415/464 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||| ||||||||
Sbjct: 79 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaaaaggacgtt 138
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 139 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 198
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 199 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 258
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | ||| |||||
Sbjct: 259 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaa 318
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 319 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 378
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 379 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgat 438
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||||||||| || |||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 439 tggccactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccgg 498
Query: 587 tattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 499 tatcggtgctacccactcttcgcggttcattcctctgaagtgag 542
>gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 5', mRNA sequence
Length = 716
Score = 531 bits (268), Expect = e-149
Identities = 415/464 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||| ||||||||
Sbjct: 82 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaaaaggacgtt 141
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 142 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 201
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 202 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 261
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | ||| |||||
Sbjct: 262 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaa 321
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 322 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 381
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 382 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgat 441
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||||||||| || |||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 442 tggccactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccgg 501
Query: 587 tattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 502 tatcggtgctacccactcttcgcggttcattcctctgaagtgag 545
>gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 527 bits (266), Expect = e-148
Identities = 380/418 (90%)
Strand = Plus / Plus
Query: 213 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgac 272
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 2 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 61
Query: 273 atgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagagg 332
|||||||||||||||||||||||||||||||| |||||||| || | ||||||||||||
Sbjct: 62 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 121
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 122 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 181
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| | ||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 182 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 241
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 242 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 301
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||| ||||||||||||||||| || |||||||||||||| || |||||||| ||||||
Sbjct: 302 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 361
Query: 573 cacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||||| ||||||||||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 362 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 419
>gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_12_D10_A011 3', mRNA sequence
Length = 592
Score = 527 bits (266), Expect = e-148
Identities = 380/418 (90%)
Strand = Plus / Plus
Query: 213 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgac 272
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 22 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 81
Query: 273 atgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagagg 332
|||||||||||||||||||||||||||||||| |||||||| || | ||||||||||||
Sbjct: 82 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 141
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 142 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 201
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| | ||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 202 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 261
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 321
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||| ||||||||||||||||| || |||||||||||||| || |||||||| ||||||
Sbjct: 322 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 381
Query: 573 cacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||||| ||||||||||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 382 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 439
>gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 511 bits (258), Expect = e-143
Identities = 379/418 (90%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 213 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgac 272
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 6 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 65
Query: 273 atgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagagg 332
|||||||||||||||||||||||||||||||| |||||||| || | ||||||||||||
Sbjct: 66 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 125
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 126 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 185
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| | ||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 186 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 245
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 246 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 305
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||| ||||||||||||||||| || |||||||||||||| || |||||||| ||||||
Sbjct: 306 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 365
Query: 573 cacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaatgag 630
||||| ||||||||||| ||||| || || || |||||||| || |||||||| ||||
Sbjct: 366 cacggtaggcccggtatcggtgctaccca-tcttcgcggttcattcctctgaagtgag 422
>gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_79_F02_A011 5', mRNA sequence
Length = 387
Score = 486 bits (245), Expect = e-135
Identities = 335/365 (91%)
Strand = Plus / Plus
Query: 213 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgac 272
||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 22 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 81
Query: 273 atgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagagg 332
|||||||||||||||||||||||||||||||| |||||||| || | ||||||||||||
Sbjct: 82 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 141
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 142 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 201
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|| | ||| |||||||| ||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 202 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 261
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 321
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
||||| ||||||||||||||||| || |||||||||||||| || |||||||| ||||||
Sbjct: 322 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 381
Query: 573 cacgg 577
|||||
Sbjct: 382 cacgg 386
>gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 319
Score = 476 bits (240), Expect = e-132
Identities = 295/311 (94%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 169 tggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagagg-acgttc 227
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 10 tggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagagggacgttc 69
Query: 228 cgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgac 287
|||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 70 cgcaag-acagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgac 128
Query: 288 ctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaag 347
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaa 188
Query: 348 cccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaag 407
|| |||||||||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct: 189 ccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaag 248
Query: 408 ccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggagc 467
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||
Sbjct: 249 ccagagccagtgaagacccatctccgcaacntgatcattgtccctgagatgattggaagc 308
Query: 468 attgttggtgt 478
|||||||||||
Sbjct: 309 attgttggtgt 319
>gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 464 bits (234), Expect = e-129
Identities = 342/378 (90%)
Strand = Plus / Plus
Query: 253 acctcgatgcgctgcttgacatgtccaccgacgacctcgtccagctcttcccagcgcgcg 312
||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 acctcgacgcgctcctcgacatgtccaccgacgacctcgtccagctcttccccgcgcgcg 64
Query: 313 ccaggagaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgc 372
| || | ||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 65 cacggcggaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctcc 124
Query: 373 gcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctcc 432
|||| ||||||||||| || || | ||| |||||||| ||||| ||||||||||| ||||
Sbjct: 125 gcaaagcgaaaaaggacgcccccgccggtgagaagcctgagcctgtgaagacccacctcc 184
Query: 433 gcaacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaaga 492
|||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 185 gcaacatgatcattgtgcctgagatgattgggagcattgttggtgtctacaacggcaaga 244
Query: 493 ccttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctcca 552
||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 245 ccttcaaccaggttgagatcaagccggagatgattggccactacctcgcagagttctcca 304
Query: 553 tttcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggt 612
| || |||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||
Sbjct: 305 tctcgtacaagcctgtcaagcacggtaggcccggtatcggtgctacccactcttcgcggt 364
Query: 613 ttatccctctgaaatgag 630
| || |||||||| ||||
Sbjct: 365 tcattcctctgaagtgag 382
>gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 469
Score = 454 bits (229), Expect = e-126
Identities = 328/361 (90%)
Strand = Plus / Plus
Query: 270 gacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccag 329
||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||
Sbjct: 2 gacatgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccag 61
Query: 330 aggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggat 389
|||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 62 aggggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggac 121
Query: 390 gctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtc 449
|| || | ||| |||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 122 gcccccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtg 181
Query: 450 cccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgag 509
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 182 cctgagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgag 241
Query: 510 atcaagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtc 569
|||||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||
Sbjct: 242 atcaagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtc 301
Query: 570 aagcacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaatga 629
|||||||| ||||||||||| ||||| || ||||| |||||||| || |||||||| |||
Sbjct: 302 aagcacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtga 361
Query: 630 g 630
|
Sbjct: 362 g 362
>gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_40_B08_A011 5', mRNA sequence
Length = 512
Score = 400 bits (202), Expect = e-110
Identities = 301/334 (90%)
Strand = Plus / Plus
Query: 297 ctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaagcccatggcg 356
|||||||| |||||||| || | ||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaagcccatggcg 60
Query: 357 ctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagcca 416
|||||||||||||| ||||| ||||||||||| || || | ||| |||||||| |||||
Sbjct: 61 ctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaagcctgagcct 120
Query: 417 gtgaagacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggt 476
||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 121 gtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggt 180
Query: 477 gtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactat 536
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 gtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactac 240
Query: 537 cttgcagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgcc 596
|| |||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||
Sbjct: 241 ctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccggtatcggtgct 300
Query: 597 actcactcctcgcggtttatccctctgaaatgag 630
|| ||||| |||||||| || |||||||| ||||
Sbjct: 301 acccactcttcgcggttcattcctctgaagtgag 334
>gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 392 bits (198), Expect = e-107
Identities = 282/310 (90%)
Strand = Plus / Plus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 21 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcg 80
Query: 381 aaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatg 440
|||||||| || || | ||| |||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 81 aaaaaggacgcccccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatg 140
Query: 441 atcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaac 500
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 141 atcattgtgcctgagatgattgggagcattgttggtgtctacaacggcaagaccttcaac 200
Query: 501 caggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcctac 560
||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||
Sbjct: 201 caggttgagatcaagccggagatgattggccactacctcgcagagttctccatctcgtac 260
Query: 561 aagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccct 620
||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||| || |||
Sbjct: 261 aagcctgtcaagcacggtaggcccggtatcggtgctacccactcttcgcggttcattcct 320
Query: 621 ctgaaatgag 630
||||| ||||
Sbjct: 321 ctgaagtgag 330
>gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_34_C10_A010 3', mRNA sequence
Length = 508
Score = 392 bits (198), Expect = e-107
Identities = 282/310 (90%)
Strand = Plus / Plus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 21 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcg 80
Query: 381 aaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatg 440
|||||||| || || | ||| |||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 81 aaaaaggacgcccccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatg 140
Query: 441 atcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaac 500
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 141 atcattgtgcctgagatgattgggagcattgttggtgtctacaacggcaagaccttcaac 200
Query: 501 caggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcctac 560
||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||
Sbjct: 201 caggttgagatcaagccggagatgattggccactacctcgcagagttctccatctcgtac 260
Query: 561 aagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccct 620
||||| ||||||||||| ||||||||||| ||||| || ||||| |||||||| || |||
Sbjct: 261 aagcctgtcaagcacggtaggcccggtatcggtgctacccactcttcgcggttcattcct 320
Query: 621 ctgaaatgag 630
||||| ||||
Sbjct: 321 ctgaagtgag 330
>gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 383 bits (193), Expect = e-104
Identities = 298/333 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||| ||||||||
Sbjct: 68 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaaaaggacgtt 127
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 128 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 187
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 188 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 247
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | ||| |||||
Sbjct: 248 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaa 307
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 308 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 367
Query: 467 cattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||||||||| ||||||||||||||
Sbjct: 368 cattgttggtgtctacaacggcaagaccttcaa 400
>gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 405
Score = 369 bits (186), Expect = e-100
Identities = 291/326 (89%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgtt 226
|||||||||||| || ||||| ||||||| || |||| | || ||||||||||||||
Sbjct: 80 catggcggacgtggaggtggatacggaggtggcggccgcggggccgaagaagaggacgtt 139
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 140 ccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgacga 199
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaa 346
|||||||||||||||||| |||||||| || | ||||||||||||||| ||||||||||
Sbjct: 200 cctcgtccagctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaa 259
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| ||||| ||||||||||| || || | || |||||
Sbjct: 260 gcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcacccgctggtgagaa 319
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||| ||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 320 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 379
Query: 467 cattgttggtgtctacaatggcaaga 492
|||||||||||||||||| |||||||
Sbjct: 380 cattgttggtgtctacaacggcaaga 405
>gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0344, mRNA sequence
Length = 578
Score = 307 bits (155), Expect = 9e-082
Identities = 323/379 (85%)
Strand = Plus / Plus
Query: 244 gcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgacctcgtccagctcttcc 303
||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggcgtggacctcgacgcgctcctcgacatgtccaccgacgacctcgtccagctcttcc 60
Query: 304 cagcgcgcgccaggagaaggttccagaggggtttgaagaggaagcccatggcgctcatca 363
| || |||||| | |||||||||||||||||| ||||||||||||| ||||| |||||||
Sbjct: 61 ccgcccgcgcccgcagaaggttccagaggggtctgaagaggaagccgatggctctcatca 120
Query: 364 agaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaaga 423
||| |||||| | |||||||||||| || |||| || |||||||| || || || | ||
Sbjct: 121 agaggctgcggacggcgaaaaaggaggcacctgctggtgagaagcccgaacctgtcagga 180
Query: 424 cccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtctaca 483
| ||||| ||||||||||||||||| || |||||||| || ||| | |||| || ||||
Sbjct: 181 ctcatctgcgcaacatgatcattgtgccagagatgataggtagcgtaattggagtgtaca 240
Query: 484 atggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttgcag 543
|||| || || ||||| ||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 241 atgggaaaacattcaatcaggttgagatcaagcctgagatgattgggcactaccttgctg 300
Query: 544 agttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactcact 603
| |||||||| |||||||| ||||||||||| ||||||||||| ||||| || || |
Sbjct: 301 aattctccatcagttacaagcccgtcaagcacggaaggcccggtatcggtgctacccatt 360
Query: 604 cctcgcggtttatccctct 622
|||| |||| ||||||||
Sbjct: 361 cctccaggttcatccctct 379
>gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 420
Score = 287 bits (145), Expect = 8e-076
Identities = 208/229 (90%)
Strand = Plus / Plus
Query: 402 gagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgatt 461
|||||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 4 gagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgatt 63
Query: 462 gggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgag 521
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 64 gggagcattgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagccagag 123
Query: 522 atgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggagg 581
|||||||||||||| || |||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 124 atgattggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggtagg 183
Query: 582 cccggtattggtgccactcactcctcgcggtttatccctctgaaatgag 630
|||||||| ||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 184 cccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 232
>gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 402
Score = 285 bits (144), Expect = 3e-075
Identities = 201/220 (91%)
Strand = Plus / Plus
Query: 411 gagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggagcatt 470
||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 5 gagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggagcatt 64
Query: 471 gttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggc 530
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 65 gttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgattggc 124
Query: 531 cactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccggtatt 590
||||| || |||||||||||||| || |||||||| ||||||||||| |||||||||||
Sbjct: 125 cactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccggtatc 184
Query: 591 ggtgccactcactcctcgcggtttatccctctgaaatgag 630
||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 185 ggtgctacccactcttcgcggttcattcctctgaagtgag 224
>gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 389
Score = 276 bits (139), Expect = 3e-072
Identities = 193/211 (91%)
Strand = Plus / Plus
Query: 420 aagacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtc 479
|||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 aagacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggtgtt 60
Query: 480 tacaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatctt 539
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 61 tacaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactacctc 120
Query: 540 gcagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccact 599
||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| ||
Sbjct: 121 gcagagttctccatttcgtacaagcctgtcaagcacggtaggcccggtatcggtgctacc 180
Query: 600 cactcctcgcggtttatccctctgaaatgag 630
||||| |||||||| || |||||||| ||||
Sbjct: 181 cactcttcgcggttcattcctctgaagtgag 211
>gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943868, DNA
sequence
Length = 642
Score = 268 bits (135), Expect = 8e-070
Identities = 150/155 (96%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgttccg 229
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 525 ggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccg 466
Query: 230 caagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgacct 289
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 465 caagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacct 406
Query: 290 cgtccagctcttcccagcgcgcgccaggagaaggt 324
||||||||||||||| |||||||||||||||||||
Sbjct: 405 cgtccagctcttccccgcgcgcgccaggagaaggt 371
Score = 103 bits (52), Expect = 3e-020
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 294 aggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcg 235
>gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221254, DNA
sequence
Length = 763
Score = 268 bits (135), Expect = 8e-070
Identities = 150/155 (96%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgttccg 229
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 462 ggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccg 403
Query: 230 caagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgacct 289
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 402 caagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacct 343
Query: 290 cgtccagctcttcccagcgcgcgccaggagaaggt 324
||||||||||||||| |||||||||||||||||||
Sbjct: 342 cgtccagctcttccccgcgcgcgccaggagaaggt 308
Score = 103 bits (52), Expect = 3e-020
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 231 aggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcg 172
>gb|CW285308.1|CW285308 104_762_11410262_116_35504_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11410262, DNA
sequence
Length = 510
Score = 260 bits (131), Expect = 2e-067
Identities = 149/155 (96%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgctcccaagaagaggacgttccg 229
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 386 ggcggacgtcgatgtggagcatgaggtcgccgccggcgctcccaagaagaggacgttccg 327
Query: 230 caagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgacct 289
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 caagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacct 267
Query: 290 cgtccagctcttcccagcgcgcgccaggagaaggt 324
||||||||||||||| |||||||||||||||||||
Sbjct: 266 cgtccagctcttccccgcgcgcgccaggagaaggt 232
Score = 103 bits (52), Expect = 3e-020
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 155 aggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcg 96
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 217,360
Number of Sequences: 832831
Number of extensions: 217360
Number of successful extensions: 60974
Number of sequences better than 0.5: 96
Number of HSP's better than 0.5 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60731
Number of HSP's gapped (non-prelim): 136
length of query: 845
length of database: 491,359,669
effective HSP length: 20
effective length of query: 825
effective length of database: 474,703,049
effective search space: 391630015425
effective search space used: 391630015425
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)