BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542159.2.1
(1231 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG559243.1|BG559243 RHIZ2_52_D10.b1_A003 Rhizome2 (RHIZ2... 890 0.0
gb|CF488544.1|CF488544 POL1_50_D11.g1_A002 Pollen Sorghum b... 815 0.0
gb|CF770146.1|CF770146 DSBF1_6_A09.b1_A010 Drought-stressed... 775 0.0
gb|BG560491.1|BG560491 RHIZ2_75_B03.b1_A003 Rhizome2 (RHIZ2... 771 0.0
gb|BM328253.1|BM328253 PIC1_22_H06.g1_A002 Pathogen-infecte... 611 e-173
gb|BG558927.1|BG558927 RHIZ2_52_D10.g1_A003 Rhizome2 (RHIZ2... 587 e-166
gb|CW316112.1|CW316112 104_807_11472721_148_35844_007 Sorgh... 565 e-159
gb|CW398305.1|CW398305 fsbb001f087k23f0 Sorghum methylation... 565 e-159
gb|CF770226.1|CF770226 DSBF1_6_A09.g1_A010 Drought-stressed... 557 e-157
gb|CF488464.1|CF488464 POL1_50_D11.b1_A002 Pollen Sorghum b... 545 e-153
gb|BF318007.1|BF318007 OV1_10_F06.b1_A002 Ovary 1 (OV1) Sor... 482 e-134
gb|BG559904.1|BG559904 RHIZ2_75_B03.g1_A003 Rhizome2 (RHIZ2... 470 e-130
gb|CN128660.1|CN128660 RHOH1_30_G10.g1_A002 Acid- and alkal... 464 e-129
gb|BG556861.1|BG556861 EM1_39_E11.b1_A002 Embryo 1 (EM1) So... 416 e-114
gb|CD430682.1|CD430682 ETH1_20_C10.g1_A002 Ethylene-treated... 391 e-106
gb|CD463150.1|CD463150 ETH1_42_A11.g1_A002 Ethylene-treated... 371 e-100
gb|CD463125.1|CD463125 ETH1_42_A11.b1_A002 Ethylene-treated... 367 2e-099
gb|CN128569.1|CN128569 RHOH1_30_G10.b1_A002 Acid- and alkal... 367 2e-099
gb|CN128667.1|CN128667 RHOH1_30_H05.g1_A002 Acid- and alkal... 349 4e-094
gb|BG560132.1|BG560132 RHIZ2_69_G02.b1_A003 Rhizome2 (RHIZ2... 345 6e-093
gb|AW677370.1|AW677370 DG1_6_G12.b1_A002 Dark Grown 1 (DG1)... 343 2e-092
gb|CN141236.1|CN141236 OX1_50_E01.b1_A002 Oxidatively-stres... 343 2e-092
gb|CD432713.1|CD432713 ETH1_25_F07.g1_A002 Ethylene-treated... 339 4e-091
gb|CN144473.1|CN144473 WOUND1_22_C06.g1_A002 Wounded leaves... 333 2e-089
gb|CF488150.1|CF488150 POL1_48_C07.b1_A002 Pollen Sorghum b... 329 4e-088
gb|BF317864.1|BF317864 OV1_10_F06.g1_A002 Ovary 1 (OV1) Sor... 321 9e-086
gb|CF486265.1|CF486265 POL1_36_E11.g1_A002 Pollen Sorghum b... 319 3e-085
gb|CF486181.1|CF486181 POL1_36_E11.b1_A002 Pollen Sorghum b... 317 1e-084
gb|BE597381.1|BE597381 PI1_72_G12.g1_A002 Pathogen induced ... 309 3e-082
gb|BE361076.1|BE361076 DG1_69_B08.b1_A002 Dark Grown 1 (DG1... 303 2e-080
gb|CF485333.1|CF485333 POL1_30_H05.g1_A002 Pollen Sorghum b... 299 3e-079
gb|BG739586.1|BG739586 EM1_82_F12.b1_A002 Embryo 1 (EM1) So... 297 1e-078
gb|BE366220.1|BE366220 PI1_31_B08.b2_A002 Pathogen induced ... 293 2e-077
gb|BI074813.1|BI074813 IP1_16_G05.b1_A002 Immature pannicle... 293 2e-077
gb|BG411038.1|BG411038 EM1_25_A05.b1_A002 Embryo 1 (EM1) So... 287 1e-075
gb|CD221256.1|CD221256 CCC1_74_E08.g1_A007 Callus culture/c... 285 5e-075
gb|AW745465.1|AW745465 WS1_35_G04.b1_A002 Water-stressed 1 ... 278 1e-072
gb|BG556775.1|BG556775 EM1_38_D10.b1_A002 Embryo 1 (EM1) So... 270 3e-070
gb|CN124370.1|CN124370 RHOH1_4_G03.b1_A002 Acid- and alkali... 260 3e-067
gb|BG240142.1|BG240142 OV1_18_D09.b1_A002 Ovary 1 (OV1) Sor... 258 1e-066
gb|CF756372.1|CF756372 DSAF1_5_E02.b1_A011 Drought-stressed... 256 4e-066
gb|CF756458.1|CF756458 DSAF1_5_E02.g1_A011 Drought-stressed... 256 4e-066
gb|CW183802.1|CW183802 104_599_11164809_148_36672_033 Sorgh... 234 2e-059
gb|CW220477.1|CW220477 104_655_11197369_148_37158_013 Sorgh... 234 2e-059
gb|CW260253.1|CW260253 104_726_11228863_148_35188_018 Sorgh... 234 2e-059
gb|CW172766.1|CW172766 104_584_11156467_148_36542_078 Sorgh... 232 6e-059
gb|CW500362.1|CW500362 fsbb001f295k09f0 Sorghum methylation... 232 6e-059
gb|CF757800.1|CF757800 DSAF1_22_E01.g1_A011 Drought-stresse... 232 6e-059
gb|AW678236.1|AW678236 WS1_14_H05.b1_A002 Water-stressed 1 ... 224 2e-056
gb|BG557945.1|BG557945 EM1_39_E11.g1_A002 Embryo 1 (EM1) So... 224 2e-056
gb|BG049316.1|BG049316 OV1_18_D09.g1_A002 Ovary 1 (OV1) Sor... 222 6e-056
gb|BE366246.1|BE366246 PI1_31_B08.g1_A002 Pathogen induced ... 220 2e-055
gb|BG739419.1|BG739419 EM1_82_F12.g1_A002 Embryo 1 (EM1) So... 220 2e-055
gb|BM327398.1|BM327398 PIC1_14_C07.g1_A002 Pathogen-infecte... 214 1e-053
gb|CF485251.1|CF485251 POL1_30_H05.b1_A002 Pollen Sorghum b... 214 1e-053
gb|CN144412.1|CN144412 WOUND1_22_C06.b1_A002 Wounded leaves... 208 9e-052
gb|BG465337.1|BG465337 EM1_75_B01.g1_A002 Embryo 1 (EM1) So... 198 9e-049
gb|BG357807.1|BG357807 OV2_30_E07.b1_A002 Ovary 2 (OV2) Sor... 192 5e-047
gb|CW277256.1|CW277256 104_751_11405927_148_35413_092 Sorgh... 188 8e-046
gb|BG932934.1|BG932934 DG1_69_B08.g1_A002 Dark Grown 1 (DG1... 188 8e-046
gb|CD432617.1|CD432617 ETH1_25_F07.b1_A002 Ethylene-treated... 180 2e-043
gb|CW089881.1|CW089881 104_435_10948964_114_32612_072 Sorgh... 176 3e-042
gb|BG410710.1|BG410710 EM1_25_A05.g1_A002 Embryo 1 (EM1) So... 174 1e-041
gb|BI074494.1|BI074494 IP1_16_G05.g1_A002 Immature pannicle... 174 1e-041
gb|CF488232.1|CF488232 POL1_48_C07.g1_A002 Pollen Sorghum b... 172 5e-041
gb|CD221229.1|CD221229 CCC1_74_E08.b1_A007 Callus culture/c... 170 2e-040
gb|CN128576.1|CN128576 RHOH1_30_H05.b1_A002 Acid- and alkal... 170 2e-040
gb|BG556535.1|BG556535 EM1_38_D10.g1_A002 Embryo 1 (EM1) So... 159 7e-037
gb|CW398306.1|CW398306 fsbb001f087k23k0 Sorghum methylation... 147 3e-033
gb|CW031012.1|CW031012 104_259_10500552_114_30397 Sorghum m... 123 4e-026
gb|CW090835.1|CW090835 104_436_10949500_114_32607_002 Sorgh... 123 4e-026
gb|CW103784.1|CW103784 104_472_11012075_148_34434_038 Sorgh... 123 4e-026
gb|CW260646.1|CW260646 104_727_11229078_116_35196_023 Sorgh... 123 4e-026
gb|CW277255.1|CW277255 104_751_11405927_116_35409_092 Sorgh... 119 6e-025
gb|CW090836.1|CW090836 104_436_10949500_116_32611_002 Sorgh... 113 4e-023
gb|CW171339.1|CW171339 104_582_11155686_116_36528_029 Sorgh... 113 4e-023
gb|CW171340.1|CW171340 104_582_11155686_148_36527_029 Sorgh... 113 4e-023
gb|CW213082.1|CW213082 104_644_11191359_148_37027_056 Sorgh... 113 4e-023
gb|CL169616.1|CL169616 104_368_10812763_148_31808_235 Sorgh... 109 6e-022
gb|CW316111.1|CW316111 104_807_11472721_116_35840_007 Sorgh... 105 1e-020
gb|AW745579.1|AW745579 WS1_35_G04.g1_A002 Water-stressed 1 ... 90 6e-016
gb|CW377797.1|CW377797 fsbb001f056e11f0 Sorghum methylation... 88 2e-015
gb|CW213081.1|CW213081 104_644_11191359_116_37026_056 Sorgh... 82 1e-013
gb|CD463279.1|CD463279 ETH1_43_D06.b1_A002 Ethylene-treated... 66 8e-009
gb|CD463317.1|CD463317 ETH1_43_D06.g1_A002 Ethylene-treated... 66 8e-009
gb|BM328532.1|BM328532 PIC1_30_D03.g1_A002 Pathogen-infecte... 60 5e-007
gb|CW466408.1|CW466408 fsbb001f217k04f0 Sorghum methylation... 56 8e-006
gb|CW038963.1|CW038963 104_271_10505218_115_30388 Sorghum m... 54 3e-005
gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete s... 54 3e-005
gb|CW123389.1|CW123389 104_502_11111188_116_34688_004 Sorgh... 52 1e-004
gb|CW217902.1|CW217902 104_651_11195907_116_37456_010 Sorgh... 52 1e-004
gb|CW217903.1|CW217903 104_651_11195907_148_37457_010 Sorgh... 52 1e-004
gb|CW240096.1|CW240096 104_698_11218021_116_37521_053 Sorgh... 52 1e-004
gb|CW240097.1|CW240097 104_698_11218021_148_37522_053 Sorgh... 52 1e-004
gb|CW406920.1|CW406920 fsbb001f100c15k0 Sorghum methylation... 52 1e-004
gb|CW025451.1|CW025451 104_227_10488202_116_30504 Sorghum m... 50 5e-004
gb|CW250932.1|CW250932 104_713_11223654_148_35059_025 Sorgh... 50 5e-004
gb|CW413315.1|CW413315 fsbb001f112g09k0 Sorghum methylation... 50 5e-004
gb|BZ341439.1|BZ341439 ic45d05.b1 WGS-SbicolorF (JM107 adap... 48 0.002
gb|BZ341440.1|BZ341440 ic45d05.g1 WGS-SbicolorF (JM107 adap... 48 0.002
gb|CW112632.1|CW112632 104_486_11104994_148_34542_005 Sorgh... 48 0.002
gb|CW125192.1|CW125192 104_505_11112201_148_34709_041 Sorgh... 48 0.002
gb|CW135749.1|CW135749 104_520_11118013_116_34836_055 Sorgh... 48 0.002
gb|CW135750.1|CW135750 104_520_11118013_148_34832_055 Sorgh... 48 0.002
gb|CW173305.1|CW173305 104_584_11156771_148_36546_034 Sorgh... 48 0.002
gb|CW202181.1|CW202181 104_628_11184958_116_37091_091 Sorgh... 48 0.002
gb|CW215634.1|CW215634 104_648_11194645_148_37118_063 Sorgh... 48 0.002
gb|CW232239.1|CW232239 104_681_11211555_148_37349_002 Sorgh... 48 0.002
gb|CW304447.1|CW304447 104_789_11465787_116_35703_010 Sorgh... 48 0.002
gb|CW304448.1|CW304448 104_789_11465787_148_35707_010 Sorgh... 48 0.002
gb|CW340330.1|CW340330 104_841_11485743_148_36147_058 Sorgh... 48 0.002
gb|CW458033.1|CW458033 fsbb001f204b22k0 Sorghum methylation... 48 0.002
gb|CL170066.1|CL170066 104_370_10813511_116_31789_215 Sorgh... 46 0.008
gb|CW134545.1|CW134545 104_518_11117364_116_34823_036 Sorgh... 46 0.008
gb|CW136360.1|CW136360 104_521_11118340_116_34845_010 Sorgh... 46 0.008
gb|CW152701.1|CW152701 104_554_11144633_148_36333_079 Sorgh... 46 0.008
gb|CW165655.1|CW165655 104_574_11152623_148_36480_062 Sorgh... 46 0.008
gb|CW193240.1|CW193240 104_616_11179461_116_36777_095 Sorgh... 46 0.008
gb|CW193241.1|CW193241 104_616_11179461_148_36778_095 Sorgh... 46 0.008
gb|CW227072.1|CW227072 104_665_11205221_148_37224_025 Sorgh... 46 0.008
gb|CW239438.1|CW239438 104_697_11217657_148_37506_035 Sorgh... 46 0.008
gb|CW321460.1|CW321460 104_814_11475564_148_35937_034 Sorgh... 46 0.008
gb|CW448205.1|CW448205 fsbb001f181l08k0 Sorghum methylation... 46 0.008
gb|CW460735.1|CW460735 fsbb001f208a24k0 Sorghum methylation... 46 0.008
gb|CW472523.1|CW472523 fsbb001f227i01f0 Sorghum methylation... 46 0.008
gb|BG158811.1|BG158811 RHIZ2_44_F08.b1_A003 Rhizome2 (RHIZ2... 46 0.008
gb|CD229616.1|CD229616 CCC1_17_B03.g1_A007 Callus culture/c... 46 0.008
gb|CF487483.1|CF487483 POL1_44_C07.b1_A002 Pollen Sorghum b... 46 0.008
gb|CF488063.1|CF488063 POL1_47_C06.g1_A002 Pollen Sorghum b... 46 0.008
gb|BZ339740.1|BZ339740 ic34d08.g1 WGS-SbicolorF (JM107 adap... 44 0.030
gb|BZ346354.1|BZ346354 ht64h09.b1 WGS-SbicolorF (JM107 adap... 44 0.030
gb|BZ349712.1|BZ349712 hr44g08.g1 WGS-SbicolorF (JM107 adap... 44 0.030
gb|CL161024.1|CL161024 104_352_10805426_114_31826_098 Sorgh... 44 0.030
gb|CL171995.1|CL171995 104_374_10889835_116_31775_123 Sorgh... 44 0.030
gb|CW122318.1|CW122318 104_501_11110590_116_34680_029 Sorgh... 44 0.030
gb|CW198650.1|CW198650 104_623_11183087_116_36845_090 Sorgh... 44 0.030
gb|CW279865.1|CW279865 104_754_11407309_116_35433_049 Sorgh... 44 0.030
gb|CW293400.1|CW293400 104_773_11414634_116_35588_065 Sorgh... 44 0.030
gb|CW355108.1|CW355108 fsbb001f019j18f0 Sorghum methylation... 44 0.030
gb|AW285672.1|AW285672 LG1_319_H11.g1_A002 Light Grown 1 (L... 44 0.030
gb|BE355798.1|BE355798 DG1_11_C04.b1_A002 Dark Grown 1 (DG1... 44 0.030
gb|BG557304.1|BG557304 EM1_42_C05.b1_A002 Embryo 1 (EM1) So... 44 0.030
gb|CD206522.1|CD206522 HS1_23_H04.b1_A012 Heat-shocked seed... 44 0.030
gb|CN124096.1|CN124096 RHOH1_2_D05.g1_A002 Acid- and alkali... 44 0.030
gb|BZ331638.1|BZ331638 hw10g09.b1 WGS-SbicolorF (JM107 adap... 42 0.12
gb|CL154161.1|CL154161 104_339_10781206_114_31371_070 Sorgh... 42 0.12
gb|CL155478.1|CL155478 104_341_10782171_114_31471_267 Sorgh... 42 0.12
gb|CL155479.1|CL155479 104_341_10782171_116_31472_267 Sorgh... 42 0.12
gb|CL159316.1|CL159316 104_348_10804164_114_31379_372 Sorgh... 42 0.12
gb|CL181680.1|CL181680 104_392_10896906_116_31926_282 Sorgh... 42 0.12
gb|CW044274.1|CW044274 104_280_10508857_114_30268 Sorghum m... 42 0.12
gb|CW051407.1|CW051407 104_291_10515230_114_30192 Sorghum m... 42 0.12
gb|CW068491.1|CW068491 104_317_10525153_1_30096 Sorghum met... 42 0.12
gb|CW155824.1|CW155824 104_558_11146345_116_36367_007 Sorgh... 42 0.12
gb|CW262073.1|CW262073 104_729_11229855_148_35203_056 Sorgh... 42 0.12
gb|CW262685.1|CW262685 104_730_11230215_148_35221_058 Sorgh... 42 0.12
gb|CW331464.1|CW331464 104_828_11480915_116_36023_036 Sorgh... 42 0.12
gb|CW372345.1|CW372345 fsbb001f048d09k0 Sorghum methylation... 42 0.12
gb|CW479180.1|CW479180 fsbb001f237h21f0 Sorghum methylation... 42 0.12
gb|CW486898.1|CW486898 fsbb001f252h01f0 Sorghum methylation... 42 0.12
gb|BG465007.1|BG465007 EM1_35_A05.b1_A002 Embryo 1 (EM1) So... 42 0.12
gb|CD206130.1|CD206130 HS1_20_D01.g1_A012 Heat-shocked seed... 42 0.12
gb|CD220361.1|CD220361 CCC1_66_B11.g1_A007 Callus culture/c... 42 0.12
gb|CD223164.1|CD223164 CCC1_26_F02.g1_A007 Callus culture/c... 42 0.12
gb|CD224192.1|CD224192 CCC1_32_D04.g1_A007 Callus culture/c... 42 0.12
gb|CD224695.1|CD224695 CCC1_35_G05.g1_A007 Callus culture/c... 42 0.12
gb|CD224719.1|CD224719 CCC1_35_E10.g1_A007 Callus culture/c... 42 0.12
gb|CD463521.1|CD463521 ETH1_45_H08.b1_A002 Ethylene-treated... 42 0.12
gb|CD463594.1|CD463594 ETH1_45_H08.g1_A002 Ethylene-treated... 42 0.12
gb|CF426969.1|CF426969 PH1_2_B09.g1_A002 Phosphorous-defici... 42 0.12
gb|CF430133.1|CF430133 PH1_26_F08.g1_A002 Phosphorous-defic... 42 0.12
gb|CF433034.1|CF433034 NIT1_20_C12.g1_A002 Nitrogen-deficie... 42 0.12
gb|CF489238.1|CF489238 POL1_55_E11.g1_A002 Pollen Sorghum b... 42 0.12
gb|CN131209.1|CN131209 RHOH1_46_B12.g1_A002 Acid- and alkal... 42 0.12
gb|CN137038.1|CN137038 OX1_54_G05.g1_A002 Oxidatively-stres... 42 0.12
gb|CX611475.1|CX611475 ANR1_24_H03.g1_A002 Anaerobic roots ... 42 0.12
gb|BH840756.1|BH840756 pSB-0063 pSB Sorghum bicolor genomic... 40 0.47
gb|CL158103.1|CL158103 104_346_10803308_114_31375_284 Sorgh... 40 0.47
gb|CL158104.1|CL158104 104_346_10803308_116_31376_284 Sorgh... 40 0.47
gb|CL163599.1|CL163599 104_357_10807257_114_31812_009 Sorgh... 40 0.47
gb|CL169812.1|CL169812 104_370_10813305_148_31788_009 Sorgh... 40 0.47
gb|CL181870.1|CL181870 104_393_10897036_148_31921_028 Sorgh... 40 0.47
gb|CL189276.1|CL189276 104_406_10902183_114_32469_058 Sorgh... 40 0.47
gb|CL189956.1|CL189956 104_407_10905741_114_32477_085 Sorgh... 40 0.47
gb|CL192021.1|CL192021 104_414_10939949_114_32247_023 Sorgh... 40 0.47
gb|CW025952.1|CW025952 104_227_10488488_114_30508 Sorghum m... 40 0.47
gb|CW025953.1|CW025953 104_227_10488488_116_30504 Sorghum m... 40 0.47
gb|CW030639.1|CW030639 104_258_10500345_114_30403 Sorghum m... 40 0.47
gb|CW064222.1|CW064222 104_310_10522443_115_30146 Sorghum m... 40 0.47
gb|CW093680.1|CW093680 104_457_10999924_116_37476_016 Sorgh... 40 0.47
gb|CW110985.1|CW110985 104_484_11104045_148_34525_061 Sorgh... 40 0.47
gb|CW145743.1|CW145743 104_538_11138627_116_34978_042 Sorgh... 40 0.47
gb|CW198352.1|CW198352 104_623_11182930_116_36848_047 Sorgh... 40 0.47
gb|CW208336.1|CW208336 104_637_11188619_116_37465_034 Sorgh... 40 0.47
gb|CW208337.1|CW208337 104_637_11188619_148_37466_034 Sorgh... 40 0.47
gb|CW252555.1|CW252555 104_715_11224574_116_35095_051 Sorgh... 40 0.47
gb|CW252556.1|CW252556 104_715_11224574_148_35091_051 Sorgh... 40 0.47
gb|CW306589.1|CW306589 104_792_11466923_116_35709_042 Sorgh... 40 0.47
gb|CW306590.1|CW306590 104_792_11466923_148_35713_042 Sorgh... 40 0.47
gb|CW315989.1|CW315989 104_807_11472655_148_35846_028 Sorgh... 40 0.47
gb|CW355655.1|CW355655 fsbb001f020g05f0 Sorghum methylation... 40 0.47
gb|CW372197.1|CW372197 fsbb001f048a03f0 Sorghum methylation... 40 0.47
gb|CW372934.1|CW372934 fsbb001f049b03f0 Sorghum methylation... 40 0.47
gb|CW385894.1|CW385894 fsbb001f069i20f0 Sorghum methylation... 40 0.47
gb|CW387377.1|CW387377 fsbb001f071l02f0 Sorghum methylation... 40 0.47
gb|CW390008.1|CW390008 fsbb001f075h16f0 Sorghum methylation... 40 0.47
gb|CW404969.1|CW404969 fsbb001f097f13k0 Sorghum methylation... 40 0.47
gb|CW458570.1|CW458570 fsbb001f204o18f0 Sorghum methylation... 40 0.47
gb|CW467050.1|CW467050 fsbb001f218j06k0 Sorghum methylation... 40 0.47
gb|CW493463.1|CW493463 fsbb001f284d22k0 Sorghum methylation... 40 0.47
gb|AW287235.2|AW287235 LG1_268_C08.b1_A002 Light Grown 1 (L... 40 0.47
gb|BE918189.1|BE918189 OV1_3_A04.b1_A002 Ovary 1 (OV1) Sorg... 40 0.47
gb|BF705088.1|BF705088 RHIZ2_1_C07.b1_A003 Rhizome2 (RHIZ2)... 40 0.47
gb|BG557407.1|BG557407 EM1_43_F06.b1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BG739457.1|BG739457 EM1_81_B06.b1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BI074757.1|BI074757 IP1_15_D11.b1_A002 Immature pannicle... 40 0.47
gb|BI211817.1|BI211817 IP1_61_E02.b1_A002 Immature pannicle... 40 0.47
gb|CB927319.1|CB927319 ABA1_14_E02.g1_A012 Abscisic acid-tr... 40 0.47
gb|CD203877.1|CD203877 HS1_2_C07.g1_A012 Heat-shocked seedl... 40 0.47
gb|CD233379.1|CD233379 SS1_13_C07.g1_A012 Salt-stressed see... 40 0.47
gb|CF072759.1|CF072759 FE1_25_G11.g1_A002 Iron-deficient se... 40 0.47
gb|CF429400.1|CF429400 PH1_21_C09.g1_A002 Phosphorous-defic... 40 0.47
gb|CF432315.1|CF432315 NIT1_15_G08.g1_A002 Nitrogen-deficie... 40 0.47
gb|CN139228.1|CN139228 OX1_16_G04.g1_A002 Oxidatively-stres... 40 0.47
gb|CN150305.1|CN150305 WOUND1_68_G03.b1_A002 Wounded leaves... 40 0.47
>gb|BG559243.1|BG559243 RHIZ2_52_D10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 561
Score = 890 bits (449), Expect = 0.0
Identities = 524/549 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 13 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 72
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 132
Query: 253 cctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccac 312
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 133 cctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgac 192
Query: 313 gtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccacca 372
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 193 gtcagaagagctgagcatcggcaggatcaagttcaaggcgttcgacctcgggggccacca 252
Query: 373 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 312
Query: 433 ggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgc 492
||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 313 ggatgctgttgacaaggaacggtttgccgagtcaaagaaagagcttgatgctcttctagc 372
Query: 493 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 432
Query: 553 cgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcacaaccgggaa 612
|||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||
Sbjct: 433 cgcggcttcagaggaggaactgcggtactaccttggcctgagcaacttcacaacggggaa 492
Query: 613 gggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcatgtgcagtgt 672
|||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||
Sbjct: 493 gggcaacgtgaacttggctgactccaacgttcgccccctggagatcttcatgtgcagtgt 552
Query: 673 ggtgcgcaa 681
|||||||||
Sbjct: 553 ggtgcgcaa 561
>gb|CF488544.1|CF488544 POL1_50_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_50_D11_A002 5', mRNA sequence
Length = 613
Score = 815 bits (411), Expect = 0.0
Identities = 525/559 (93%), Gaps = 3/559 (0%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 58 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 117
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 118 gctgtggc-gaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 176
Query: 253 cctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccac 312
||||||||||||||| | ||||||||||||||| |||||||||||| ||||| ||
Sbjct: 177 cctcctccacatgctca-ggacgagcggctcgtgcagcaccagccgttttt-tacccgac 234
Query: 313 gtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccacca 372
|||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 235 gtcagaagagctgagcatcggcaggatcaagttcaaggccttcgacctcgggggccacca 294
Query: 373 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 354
Query: 433 ggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgc 492
||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 355 ggatgctgttgacaaggaacggtttgccgagtcaaagaaagagcttgatgcgcttctagc 414
Query: 493 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 415 agatgactcccttgcaaacgttcctttcctcatgctgggcaacaagattgacatcccata 474
Query: 553 cgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcacaaccgggaa 612
|||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||
Sbjct: 475 cgcggcttcagaggaggaactgcggtactaccttggcctgagcaacttcacaacggggaa 534
Query: 613 gggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcatgtgcagtgt 672
|||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||
Sbjct: 535 gggcaacgtgaacttggctgattccaatgttcgccccctggagatcttcatgtgcagtgt 594
Query: 673 ggtgcgcaagatgggctat 691
|||||||||||||||||||
Sbjct: 595 ggtgcgcaagatgggctat 613
>gb|CF770146.1|CF770146 DSBF1_6_A09.b1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_6_A09_A010 5', mRNA sequence
Length = 503
Score = 775 bits (391), Expect = 0.0
Identities = 451/471 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 33 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 92
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 93 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 152
Query: 253 cctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccac 312
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 153 cctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgac 212
Query: 313 gtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccacca 372
|||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 213 gtcagaagagctgagcatcggcaggatcaagttcaaggctttcgacctcgggggccacca 272
Query: 373 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 332
Query: 433 ggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgc 492
||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 333 ggatgctgttgacaaggaacggtttgccgagtcaaagaaagagcttgatgcgcttctagc 392
Query: 493 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 452
Query: 553 cgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcac 603
|||||||||||||||||| ||| |||||||||| |||||||||||||||||
Sbjct: 453 cgcggcttcagaggaggaactgcggtactaccttggcctgagcaacttcac 503
>gb|BG560491.1|BG560491 RHIZ2_75_B03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 481
Score = 771 bits (389), Expect = 0.0
Identities = 449/469 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 13 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 72
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 132
Query: 253 cctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccac 312
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 133 cctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgac 192
Query: 313 gtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccacca 372
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 193 gtcagaagagctgagcatcggcaggatcaagttcaaggcgttcgacctcgggggccacca 252
Query: 373 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggt 312
Query: 433 ggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgc 492
||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 313 ggatgctgttgacaaggaacggtttgccgagtcaaagaaagagcttgatgctcttctagc 372
Query: 493 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agatgactcccttgcaaacgttcctttcctcatactgggcaacaagattgacatcccata 432
Query: 553 cgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttc 601
|||||||||||||||||| ||| |||||||||| |||||||||||||||
Sbjct: 433 cgcggcttcagaggaggaactgcggtactaccttggcctgagcaacttc 481
>gb|BM328253.1|BM328253 PIC1_22_H06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 649
Score = 611 bits (308), Expect = e-173
Identities = 362/380 (95%)
Strand = Plus / Plus
Query: 385 cgtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttga 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttga 60
Query: 445 caaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccct 504
||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 61 caaggaacggtttgccgagtcaaagaaagagcttgatgcgcttctagcagatgactccct 120
Query: 505 tgcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcaga 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcaga 180
Query: 565 ggaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaa 624
|||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 181 ggaggaactgcggtactaccttggcctgagcaacttcacaacggggaagggcaacgtgaa 240
Query: 625 cttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagat 684
|||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttggctgattccaatgttcgccccctggagatcttcatgtgcagtgtggtgcgcaagat 300
Query: 685 gggctatggcgaaggcttcaaatggatgtctcagtacatcaagtgagtcgctgctgtcct 744
||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 301 gggctatggtgaaggcttcaaatggatgtctcagtacatcaagtgaggcactgtcgtcct 360
Query: 745 cttttgtccatggcgctgct 764
||||||||||||||||||||
Sbjct: 361 cttttgtccatggcgctgct 380
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 432 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 491
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 492 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 547
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 548 ggtggtctaaacggttc 564
Score = 50.1 bits (25), Expect = 5e-004
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaag-cagcgcattgttc 1003
||||||||||||||||||||||| ||| |||||||||
Sbjct: 608 ttatgtaatcacgttacatgaagccagtgcattgttc 644
>gb|BG558927.1|BG558927 RHIZ2_52_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 583
Score = 587 bits (296), Expect = e-166
Identities = 353/372 (94%)
Strand = Plus / Plus
Query: 396 actactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtt 455
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 actactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacggt 60
Query: 456 ttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttc 515
|||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 61 ttgccgagtcaaagaaagagcttgatgctcttctagcagatgactcccttgcaaacgttc 120
Query: 516 ctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagctga 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 ctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggaactgc 180
Query: 576 ggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgact 635
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 181 ggtactaccttggcctgagcaacttcacaacggggaagggcaacgtgaacttggctgact 240
Query: 636 ccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcg 695
|||| || || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 ccaacgttcgccccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtg 300
Query: 696 aaggcttcaaatggatgtctcagtacatcaagtgagtcgctgctgtcctcttttgtccat 755
|||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 301 aaggcttcaaatggatgtctcagtacatcaagtgaggccctgtcgtcctcttttgtccat 360
Query: 756 ggcgctgctgct 767
||||||||||||
Sbjct: 361 ggcgctgctgct 372
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 424 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 483
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 484 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 539
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 540 ggtggtctaaacggttc 556
>gb|CW316112.1|CW316112 104_807_11472721_148_35844_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472721, DNA
sequence
Length = 701
Score = 565 bits (285), Expect = e-159
Identities = 339/357 (94%)
Strand = Plus / Minus
Query: 408 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcga 467
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 686 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacggtttgccgagtcaa 627
Query: 468 agaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatac 527
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 626 agaaagagcttgatgcgcttctagcagatgactcccttgcaaacgttcctttcctcatac 567
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 566 tgggcaacaagattgacatcccatacgcggcttcagaggaggaactgcggtactaccttg 507
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || |
Sbjct: 506 gcctgagcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgcc 447
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 446 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaat 387
Query: 708 ggatgtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 386 ggatgtctcagtacatcaagtgaggcactgtcgtcctcttttgtccatggcgctgct 330
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Minus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 278 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 219
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 218 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 163
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 162 ggtggtctaaacggttc 146
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttc 1003
|||||||||||||||||||||||||| |||||||||
Sbjct: 102 ttatgtaatcacgttacatgaagcagtgcattgttc 67
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1033 tcggtaatggtgagcttgcggtttctaaaa 1062
||||| ||||||| ||||||||||||||||
Sbjct: 41 tcggtgatggtgaccttgcggtttctaaaa 12
>gb|CW398305.1|CW398305 fsbb001f087k23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087k23, DNA
sequence
Length = 703
Score = 565 bits (285), Expect = e-159
Identities = 339/357 (94%)
Strand = Plus / Plus
Query: 408 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcga 467
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 20 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacggtttgccgagtcaa 79
Query: 468 agaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatac 527
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80 agaaagagcttgatgcgcttctagcagatgactcccttgcaaacgttcctttcctcatac 139
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 140 tgggcaacaagattgacatcccatacgcggcttcagaggaggaactgcggtactaccttg 199
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || |
Sbjct: 200 gcctgagcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgcc 259
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaat 319
Query: 708 ggatgtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 320 ggatgtctcagtacatcaagtgaggcactgtcgtcctcttttgtccatggcgctgct 376
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 428 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 487
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 488 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 543
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 544 ggtggtctaaacggttc 560
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttc 1003
|||||||||||||||||||||||||| |||||||||
Sbjct: 604 ttatgtaatcacgttacatgaagcagtgcattgttc 639
Score = 44.1 bits (22), Expect = 0.030
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1033 tcggtaatggtgagcttgcggtttctaaaa 1062
||||| ||||||| ||||||||||||||||
Sbjct: 665 tcggtgatggtgaccttgcggtttctaaaa 694
>gb|CF770226.1|CF770226 DSBF1_6_A09.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_6_A09_A010 3', mRNA sequence
Length = 625
Score = 557 bits (281), Expect = e-157
Identities = 338/357 (94%)
Strand = Plus / Plus
Query: 408 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcga 467
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1 aggttgatgctgttgtgtacttggtggatgctgttgacaaggaacggtttgccgagtcaa 60
Query: 468 agaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatac 527
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaagagcttgatgcgcttctagcagatgactcccttgcaaacgttcctttcctcatac 120
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 121 tgggcaacaagattgacatcccatacgcggcttcagaggaggaactgcggtactaccttg 180
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
||||||||||||||||||| ||||||||||||||||||||||| || |||||||| || |
Sbjct: 181 gcctgagcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgcc 240
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaat 300
Query: 708 ggatgtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||
Sbjct: 301 ggatgtctcagtacatcaagtgaggcactgtcgtcctctttcgtccatggcgctgct 357
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 409 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 468
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct: 469 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttc--gg 524
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 525 ggtggtctaaacggttc 541
Score = 54.0 bits (27), Expect = 3e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcat 998
|||||||||||||||||||||||||| ||||
Sbjct: 589 ttatgtaatcacgttacatgaagcagtgcat 619
>gb|CF488464.1|CF488464 POL1_50_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_50_D11_A002 3', mRNA sequence
Length = 618
Score = 545 bits (275), Expect = e-153
Identities = 332/351 (94%)
Strand = Plus / Plus
Query: 414 atgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaagg 473
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 1 atgctgttgtgtacttggtggatgctgttgacaaggaacggtttgccgagtcaaagaaag 60
Query: 474 agctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggca 533
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 agcttgatgcgcttctagcagatgactcccttgcaaacgttcctttcctcatgctgggca 120
Query: 534 acaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcggcctga 593
||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||
Sbjct: 121 acaagattgacatcccatacgcggcttcagaggaggaactgcggtactaccttggcctga 180
Query: 594 gcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccctgg 653
||||||||||||| ||||||||||||||||||||||| || |||||||| || |||||||
Sbjct: 181 gcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgccccctgg 240
Query: 654 agatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgt 713
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 agatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaatggatgt 300
Query: 714 ctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 301 ctcagtacatcaagtgaggcactgtcgtcctcttttgtccatggcgctgct 351
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 403 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 462
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 463 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 518
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 519 ggtggtctaaacggttc 535
Score = 63.9 bits (32), Expect = 3e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttc 1003
|||||||||||||||||||||||||| |||||||||
Sbjct: 579 ttatgtaatcacgttacatgaagcagtgcattgttc 614
>gb|BF318007.1|BF318007 OV1_10_F06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 399
Score = 482 bits (243), Expect = e-134
Identities = 279/291 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 109 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 168
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 169 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 228
Query: 253 cctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgcagtaccccac 312
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 229 cctcctccacatgctcaaggacgagcggctcgtgcagcaccagccgacgcagtacccgac 288
Query: 313 gtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccacca 372
|||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 289 gtcagaagagctgagcatcggcaggatcaagttcaaggccttcgacctcgggggccacca 348
Query: 373 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgt 423
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgt 399
>gb|BG559904.1|BG559904 RHIZ2_75_B03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 522
Score = 470 bits (237), Expect = e-130
Identities = 291/309 (94%)
Strand = Plus / Plus
Query: 459 ccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctt 518
||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 1 ccgagtcaaagaaagagcttgatgctcttctagcagatgactcccttgcaaacgttcctt 60
Query: 519 tcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggt 578
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 61 tcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggaactgcggt 120
Query: 579 actacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactcca 638
||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 121 actaccttggcctgagcaacttcacaacggggaagggcaacgtgaacttggctgactcca 180
Query: 639 atgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaag 698
| || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 acgttcgccccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaag 240
Query: 699 gcttcaaatggatgtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggc 758
||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 241 gcttcaaatggatgtctcagtacatcaagtgaggccctgtcgtcctcttttgtccatggc 300
Query: 759 gctgctgct 767
|||||||||
Sbjct: 301 gctgctgct 309
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 361 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 420
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 421 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 476
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 477 ggtggtctaaacggttc 493
>gb|CN128660.1|CN128660 RHOH1_30_G10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_G10_A002 5', mRNA sequence
Length = 877
Score = 464 bits (234), Expect = e-129
Identities = 495/582 (85%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| || |||||||| || || || |||||||||||||
Sbjct: 253 agatgttcctgtgggactggttctacggagtgctggcctccctcggcctgtggcagaagg 312
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 313 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 372
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 373 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 432
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 433 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 492
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 493 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 552
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| || || || |||||||||||||| || || | ||||| ||| | |
Sbjct: 553 aggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttgg 612
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| || ||||| || ||||| || |||||||||||||| |||||||| || || || || |
Sbjct: 613 ccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaag 672
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
||||||| |||| |||| ||||| |||||||||||||||||||||||||| || |||
Sbjct: 673 aggagctacggtatcacctaggccttagcaacttcacaaccgggaagggcaaggtcaacc 732
Query: 627 tggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgg 686
| | ||||||||||||||||| || ||| | |||||||||||||| || ||||||||||
Sbjct: 733 ttggtgactccaatgtccggccacttgaggttttcatgtgcagtgttgttcgcaagatgg 792
Query: 687 gctatggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|||| || || || ||||| ||| | || |||||||||||||
Sbjct: 793 gctacggtgatggtttcaagtgggtctcccagtacatcaagt 834
>gb|BG556861.1|BG556861 EM1_39_E11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 416 bits (210), Expect = e-114
Identities = 426/498 (85%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 12 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 71
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 72 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 131
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 132 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 191
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 192 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 251
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 252 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 311
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| || || || |||||||||||||| || || | ||||| ||| | |
Sbjct: 312 aggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttgg 371
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| || ||||| || ||||| || |||||||||||||| |||||||| || || || || |
Sbjct: 372 ccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaag 431
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
||||||| |||| |||| ||||| |||||||||||||||||||||||||| || |||
Sbjct: 432 aggagctacggtatcacctaggccttagcaacttcacaaccgggaagggcaaggtcaacc 491
Query: 627 tggccgactccaatgtcc 644
| | |||||||||||||
Sbjct: 492 ttggtgactccaatgtcc 509
>gb|CD430682.1|CD430682 ETH1_20_C10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_C10_A002 5', mRNA sequence
Length = 624
Score = 391 bits (197), Expect = e-106
Identities = 395/461 (85%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 164 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 223
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 224 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 283
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 284 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 343
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 344 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 403
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 404 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 463
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| || || || |||||||||||||| || || | ||||| ||| | |
Sbjct: 464 aggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttgg 523
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| || ||||| || ||||| || |||||||||||||| |||||||| || || || || |
Sbjct: 524 ccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaag 583
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaacc 607
||||||| |||| |||| ||||| |||||||||||||||
Sbjct: 584 aggagctacggtatcacctaggccttagcaacttcacaacc 624
>gb|CD463150.1|CD463150 ETH1_42_A11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_A11_A002 5', mRNA sequence
Length = 608
Score = 371 bits (187), Expect = e-100
Identities = 367/427 (85%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 163 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 222
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 223 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 282
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 283 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 342
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 343 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 402
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 403 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 462
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| || || || |||||||||||||| || || | ||||| ||| | |
Sbjct: 463 aggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttgg 522
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| || ||||| || ||||| || |||||||||||||| |||||||| || || || || |
Sbjct: 523 ccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaag 582
Query: 567 aggagct 573
|||||||
Sbjct: 583 aggagct 589
>gb|CD463125.1|CD463125 ETH1_42_A11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_A11_A002 3', mRNA sequence
Length = 680
Score = 367 bits (185), Expect = 2e-099
Identities = 419/497 (84%)
Strand = Plus / Plus
Query: 232 cgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagca 291
||||||||||||||||||||| || ||||||||||| |||||||||||| | || |||||
Sbjct: 1 cgacaacgccggcaagaccacgctgctccacatgctcaaggacgagcggttggtgcagca 60
Query: 292 ccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggc 351
||||||||||||| |||| ||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 61 ccagccgacgcagcacccgacgtcggaagagctcagcatcggcaagatcaagttcaaggc 120
Query: 352 gttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggt 411
|||||||| || |||||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 121 cttcgacctcggcggccaccagatcgctcgccgcgtctggaaggattattacgcaaaggt 180
Query: 412 tgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaa 471
||||||||| || ||| |||| ||||| ||||||||| || ||||| || || || ||
Sbjct: 181 tgatgctgtagtatacctggtagatgcatatgacaaggagcgatttgcagaatcaaaaaa 240
Query: 472 ggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactggg 531
|||||||||||| || || | ||||| ||| | || || ||||| || ||||| || ||
Sbjct: 241 ggagctcgatgctctcctgtctgatgattccttggccaatgttccatttctcatccttgg 300
Query: 532 caacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcggcct 591
|||||||||||| |||||||| || || || || |||||||| |||| |||| |||||
Sbjct: 301 caacaagattgatatcccatatgctgcctctgaagaggagctacggtatcacctaggcct 360
Query: 592 gagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccct 651
|||||||||||||||||||||||||| || ||| | | ||||||||||||||||| ||
Sbjct: 361 tagcaacttcacaaccgggaagggcaaggtcaaccttggtgactccaatgtccggccact 420
Query: 652 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggat 711
||| | |||||||||||||| || |||||||||||||| || || || ||||| ||| |
Sbjct: 421 tgaggttttcatgtgcagtgttgttcgcaagatgggctacggtgatggtttcaagtgggt 480
Query: 712 gtctcagtacatcaagt 728
|| |||||||||||||
Sbjct: 481 ctcccagtacatcaagt 497
>gb|CN128569.1|CN128569 RHOH1_30_G10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_G10_A002 3', mRNA sequence
Length = 747
Score = 367 bits (185), Expect = 2e-099
Identities = 419/497 (84%)
Strand = Plus / Plus
Query: 232 cgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagca 291
||||||||||||||||||||| || ||||||||||| |||||||||||| | || |||||
Sbjct: 1 cgacaacgccggcaagaccacgctgctccacatgctcaaggacgagcggttggtgcagca 60
Query: 292 ccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggc 351
||||||||||||| |||| ||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 61 ccagccgacgcagcacccgacgtcggaagagctcagcatcggcaagatcaagttcaaggc 120
Query: 352 gttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggt 411
|||||||| || |||||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 121 cttcgacctcggcggccaccagatcgctcgccgcgtctggaaggattattacgcaaaggt 180
Query: 412 tgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaa 471
||||||||| || ||| |||| ||||| ||||||||| || ||||| || || || ||
Sbjct: 181 tgatgctgtagtatacctggtagatgcatatgacaaggagcgatttgcagaatcaaaaaa 240
Query: 472 ggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactggg 531
|||||||||||| || || | ||||| ||| | || || ||||| || ||||| || ||
Sbjct: 241 ggagctcgatgctctcctgtctgatgattccttggccaatgttccatttctcatccttgg 300
Query: 532 caacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcggcct 591
|||||||||||| |||||||| || || || || |||||||| |||| |||| |||||
Sbjct: 301 caacaagattgatatcccatatgctgcctctgaagaggagctacggtatcacctaggcct 360
Query: 592 gagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccct 651
|||||||||||||||||||||||||| || ||| | | ||||||||||||||||| ||
Sbjct: 361 tagcaacttcacaaccgggaagggcaaggtcaaccttggtgactccaatgtccggccact 420
Query: 652 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggat 711
||| | |||||||||||||| || |||||||||||||| || || || ||||| ||| |
Sbjct: 421 tgaggttttcatgtgcagtgttgttcgcaagatgggctacggtgatggtttcaagtgggt 480
Query: 712 gtctcagtacatcaagt 728
|| |||||||||||||
Sbjct: 481 ctcccagtacatcaagt 497
>gb|CN128667.1|CN128667 RHOH1_30_H05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_H05_A002 5', mRNA sequence
Length = 841
Score = 349 bits (176), Expect = 4e-094
Identities = 479/580 (82%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 129 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 188
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 189 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 248
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 249 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 308
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 309 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 368
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| |||||||| ||||| || || ||| | |||||||| |||||
Sbjct: 369 tttggaaggattactatgccaaggtggatgcagtggtctaccttgtggatgcctatgaca 428
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 429 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 488
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 489 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 548
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
|||| || | || || | || |||||||||||||| || || |||||||| || |||
Sbjct: 549 aggaactccgttatcacatggggctgagcaacttcaccactggcaagggcaaggttaacc 608
Query: 627 tggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgg 686
||| ||| || || ||||| ||||||||| | ||||||||||| || || ||||||||||
Sbjct: 609 tgggcgagtctaacgtccgccccctggaggtgttcatgtgcagcgttgttcgcaagatgg 668
Query: 687 gctatggcgaaggcttcaaatggatgtctcagtacatcaa 726
| || ||||| || || || ||| |||| |||||||||||
Sbjct: 669 ggtacggcgatgggtttaagtgggtgtcacagtacatcaa 708
>gb|BG560132.1|BG560132 RHIZ2_69_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 251
Score = 345 bits (174), Expect = 6e-093
Identities = 223/237 (94%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 13 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 72
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 132
Query: 253 cctcctccacatgc-tgaa--ggacgagcggctcgtacagcaccagccgacgcagtaccc 309
|||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 133 cctcctccacatgcgtcaaggggacgagcggctcgtgcagcaccagccgacgcagtaccc 192
Query: 310 cacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttggggg 366
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 gacgtcagaagagctgagcatcggcaggatcaagttcaaggcgttcgacctcggggg 249
>gb|AW677370.1|AW677370 DG1_6_G12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 343 bits (173), Expect = 2e-092
Identities = 297/337 (88%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 207 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 266
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 267 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 326
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 327 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 386
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 387 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 446
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 447 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 506
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgc 483
|||| || ||||| || || || ||||||||||||||
Sbjct: 507 aggagcgatttgcagaatc-aaaaaggagctcgatgc 542
>gb|CN141236.1|CN141236 OX1_50_E01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_E01_A002 3', mRNA sequence
Length = 721
Score = 343 bits (173), Expect = 2e-092
Identities = 407/485 (83%)
Strand = Plus / Plus
Query: 244 caagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacgca 303
||||||||| || ||||||||||| |||||||||||| | || |||||||||||||||||
Sbjct: 1 caagaccacgctgctccacatgctcaaggacgagcggttggtgcagcaccagccgacgca 60
Query: 304 gtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgaccttgg 363
| |||| ||||| |||||| | |||||||||| ||||||||||||||| |||||||| ||
Sbjct: 61 gcacccgacgtcggaagagctcagcatcggcaagatcaagttcaaggccttcgacctcgg 120
Query: 364 gggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgt 423
|||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||
Sbjct: 121 cggccaccagatcgctcgccgcgtctggaaggattattacgcaaaggttgatgctgtagt 180
Query: 424 gtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgc 483
||| |||| ||||| ||||||||| || ||||| || || || ||||||||||||||
Sbjct: 181 atacctggtagatgcatatgacaaggagcgatttgcagaatcaaaaaaggagctcgatgc 240
Query: 484 gcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagattga 543
|| || | ||||| ||| | || || ||||| || ||||| || ||||||||||||||
Sbjct: 241 tctcctgtctgatgattccttggccaatgttccatttctcatccttggcaacaagattga 300
Query: 544 catcccatacgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcac 603
|||||||| || || || || |||||||| |||| |||| ||||| |||||||||||
Sbjct: 301 tatcccatatgctgcctctgaagaggagctacggtatcacctaggccttagcaacttcac 360
Query: 604 aaccgggaagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcat 663
||||||||||||||| || ||| | | ||||||||||||||||| || ||| | |||||
Sbjct: 361 aaccgggaagggcaaggtcaaccttggtgactccaatgtccggccacttgaggttttcat 420
Query: 664 gtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctcagtacat 723
||||||||| || |||||||||||||| || || || ||||| ||| | || ||||||||
Sbjct: 421 gtgcagtgttgttcgcaagatgggctacggtgatggtttcaagtgggtctcccagtacat 480
Query: 724 caagt 728
|||||
Sbjct: 481 caagt 485
>gb|CD432713.1|CD432713 ETH1_25_F07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_25_F07_A002 5', mRNA sequence
Length = 642
Score = 339 bits (171), Expect = 4e-091
Identities = 363/427 (85%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| ||||||| |||| ||||||||||| || || || |||||||||||||
Sbjct: 204 agatgttcctgtgggactggatctacggggtgctggcctccctcggcctgtggcagaagg 263
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||
Sbjct: 264 aggccaagatcctcttccatggcctcgacaacgccggcgagaccacgctgctccacatgc 323
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || ||||||| |||||||||| |||| ||||| |||||| | |
Sbjct: 324 tcaaggacgagcgggtggtgcagcacctgccgacgcagcacccgacgtcggaagagctca 383
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 384 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 443
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
|||||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||
Sbjct: 444 tctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgaca 503
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| || || || |||||||||||||| || || | ||||| ||| | |
Sbjct: 504 aggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttgg 563
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| || ||||| || ||||| || |||||||||||||| |||||||| || || || || |
Sbjct: 564 ccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaag 623
Query: 567 aggagct 573
|||||||
Sbjct: 624 aggagct 630
>gb|CN144473.1|CN144473 WOUND1_22_C06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_22_C06_A002 5', mRNA sequence
Length = 863
Score = 333 bits (168), Expect = 2e-089
Identities = 477/580 (82%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 134 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 193
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 194 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 253
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 254 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 313
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 314 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 373
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 374 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 433
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 434 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 493
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 494 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 553
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
|||| || | || || | || ||||||||||||| || || |||||||| || |||
Sbjct: 554 aggaactccgttatcacatggggttgagcaacttcaccactggcaagggcaaggttaacc 613
Query: 627 tggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgg 686
||| ||| || || ||||| ||||||||| | ||||||||||| || || ||||||||||
Sbjct: 614 tgggcgagtctaacgtccgccccctggaggtgttcatgtgcagcgttgttcgcaagatgg 673
Query: 687 gctatggcgaaggcttcaaatggatgtctcagtacatcaa 726
| || ||||| || || || ||| |||| |||||||||||
Sbjct: 674 ggtacggcgatgggtttaagtgggtgtcacagtacatcaa 713
>gb|CF488150.1|CF488150 POL1_48_C07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_48_C07_A002 3', mRNA sequence
Length = 627
Score = 329 bits (166), Expect = 4e-088
Identities = 247/274 (90%)
Strand = Plus / Minus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 276 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 217
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 216 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 157
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 156 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 97
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 96 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 37
Query: 387 tctggaaggactactacgccaaggttgatgctgt 420
|||||||||| || ||||| ||||||||||||||
Sbjct: 36 tctggaaggattattacgcaaaggttgatgctgt 3
>gb|BF317864.1|BF317864 OV1_10_F06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 321 bits (162), Expect = 9e-086
Identities = 201/214 (93%)
Strand = Plus / Plus
Query: 551 tacgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcacaaccggg 610
|||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||
Sbjct: 1 tacgcggcttcagaggaggaactgcggtactaccttggcctgagcaacttcacaacgggg 60
Query: 611 aagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcatgtgcagt 670
|||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 61 aagggcaacgtgaacttggctgattccaatgttcgccccctggagatcttcatgtgcagt 120
Query: 671 gtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctcagtacatcaagtga 730
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggtgcgcaagatgggctatggtgaaggcttcaaatggatgtctcagtacatcaagtga 180
Query: 731 gtcgctgctgtcctcttttgtccatggcgctgct 764
| | ||| |||||||||||||||||||||||||
Sbjct: 181 ggcactgtcgtcctcttttgtccatggcgctgct 214
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 266 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 325
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 326 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttct--g 381
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 382 ggtggtctaaacggttc 398
>gb|CF486265.1|CF486265 POL1_36_E11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_E11_A002 5', mRNA sequence
Length = 479
Score = 319 bits (161), Expect = 3e-085
Identities = 242/269 (89%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 211 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 270
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 271 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 330
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 331 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 390
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 391 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 450
Query: 387 tctggaaggactactacgccaaggttgat 415
|||||||||| || ||||| |||||||||
Sbjct: 451 tctggaaggattattacgcaaaggttgat 479
>gb|CF486181.1|CF486181 POL1_36_E11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_E11_A002 3', mRNA sequence
Length = 720
Score = 317 bits (160), Expect = 1e-084
Identities = 385/460 (83%)
Strand = Plus / Plus
Query: 269 aaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagc 328
|||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |||
Sbjct: 2 aaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctcagc 61
Query: 329 atcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtc 388
||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 62 atcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcgtc 121
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
|||||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||||
Sbjct: 122 tggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgacaag 181
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
|| || ||||| || || || |||||||||||||| || || | ||||| ||| | ||
Sbjct: 182 gagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttggcc 241
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
|| ||||| || ||||| || |||||||||||||| |||||||| || || || || |||
Sbjct: 242 aatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaagag 301
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
||||| |||| |||| ||||| |||||||||||||||||||||||||| || ||| |
Sbjct: 302 gagctacggtatcacctaggccttagcaacttcacaaccgggaagggcaaggtcaacctt 361
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||||||||||||||| || ||| | |||||||||||||| || ||||||||||||
Sbjct: 362 ggtgactccaatgtccggccacttgaggttttcatgtgcagtgttgttcgcaagatgggc 421
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || || || ||||| ||| | || |||||||||||||
Sbjct: 422 tacggtgatggtttcaagtgggtctcccagtacatcaagt 461
>gb|BE597381.1|BE597381 PI1_72_G12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 685
Score = 309 bits (156), Expect = 3e-082
Identities = 384/460 (83%)
Strand = Plus / Plus
Query: 269 aaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagc 328
|||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |||
Sbjct: 4 aaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctcagc 63
Query: 329 atcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtc 388
||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||||
Sbjct: 64 atcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcgtc 123
Query: 389 tggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaag 448
|| ||||| || ||||| |||||||||||||| || ||| |||| ||||| |||||||
Sbjct: 124 tgtaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgacaag 183
Query: 449 gaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgca 508
|| || ||||| || || || |||||||||||||| || || | ||||| ||| | ||
Sbjct: 184 gagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttggcc 243
Query: 509 aacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggag 568
|| ||||| || ||||| || |||||||||||||| |||||||| || || || || |||
Sbjct: 244 aatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaagag 303
Query: 569 gagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaacttg 628
||||| |||| |||| ||||| |||||||||||||||||||||||||| || ||| |
Sbjct: 304 gagctacggtatcacctaggccttagcaacttcacaaccgggaagggcaaggtcaacctt 363
Query: 629 gccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggc 688
| ||||||||||||||||| || ||| | |||||||||||||| || ||||||||||||
Sbjct: 364 ggtgactccaatgtccggccacttgaggttttcatgtgcagtgttgttcgcaagatgggc 423
Query: 689 tatggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || || || ||||| ||| | || |||||||||||||
Sbjct: 424 tacggtgatggtttcaagtgggtctcccagtacatcaagt 463
>gb|BE361076.1|BE361076 DG1_69_B08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 584
Score = 303 bits (153), Expect = 2e-080
Identities = 420/509 (82%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 74 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 133
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 134 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 193
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 194 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 253
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 254 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 313
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 314 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 373
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 374 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 433
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 434 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 493
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
|||| || | || || | || |||||||||||||| || || |||||||| || |||
Sbjct: 494 aggaactccgttatcacatggggctgagcaacttcaccactggcaagggcaaggttaacc 553
Query: 627 tggccgactccaatgtccggcccctggag 655
||| ||| || || ||||| |||||||||
Sbjct: 554 tgggcgagtctaacgtccgccccctggag 582
>gb|CF485333.1|CF485333 POL1_30_H05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_30_H05_A002 5', mRNA sequence
Length = 520
Score = 299 bits (151), Expect = 3e-079
Identities = 232/259 (89%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 260 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 319
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 320 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgttccacatgc 379
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 380 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 439
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||||
Sbjct: 440 gcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcg 499
Query: 387 tctggaaggactactacgc 405
|||||||||| || |||||
Sbjct: 500 tctggaaggattattacgc 518
>gb|BG739586.1|BG739586 EM1_82_F12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 297 bits (150), Expect = 1e-078
Identities = 419/509 (82%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 98 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 157
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 158 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 217
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 218 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 277
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 278 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 337
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 338 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 397
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 398 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 457
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 458 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 517
Query: 567 aggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaact 626
|||| || | || || | || |||||||||||||| || || |||||||| || |||
Sbjct: 518 aggaactccgttatcacatggggctgagcaacttcaccactggcaagggcaaggttaacc 577
Query: 627 tggccgactccaatgtccggcccctggag 655
|| ||| || || ||||| |||||||||
Sbjct: 578 tgngcgagtctaacgtccgccccctggag 606
>gb|BE366220.1|BE366220 PI1_31_B08.b2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 595
Score = 293 bits (148), Expect = 2e-077
Identities = 355/424 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 93 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 152
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 153 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 212
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 213 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 272
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 273 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 332
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 333 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 392
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 393 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 452
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 453 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 512
Query: 567 agga 570
||||
Sbjct: 513 agga 516
>gb|BI074813.1|BI074813 IP1_16_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 567
Score = 293 bits (148), Expect = 2e-077
Identities = 355/424 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 97 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 156
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 157 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 216
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 217 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 276
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 277 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 336
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 337 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 396
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 397 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 456
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 457 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 516
Query: 567 agga 570
||||
Sbjct: 517 agga 520
>gb|BG411038.1|BG411038 EM1_25_A05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 287 bits (145), Expect = 1e-075
Identities = 352/421 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 98 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 157
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 158 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 217
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 218 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 277
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 278 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 337
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 338 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 397
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 398 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 457
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 458 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 517
Query: 567 a 567
|
Sbjct: 518 a 518
>gb|CD221256.1|CD221256 CCC1_74_E08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_74_E08_A007 5', mRNA sequence
Length = 614
Score = 285 bits (144), Expect = 5e-075
Identities = 354/424 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| || || ||||||||||||||||
Sbjct: 151 agatgtttctggtggactggttctacggggtgctggcgtctctggggctgtggcagaagg 210
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 211 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 270
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 271 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 330
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 331 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 390
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 391 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 450
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 451 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 510
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 511 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 570
Query: 567 agga 570
||||
Sbjct: 571 agga 574
>gb|AW745465.1|AW745465 WS1_35_G04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 564
Score = 278 bits (140), Expect = 1e-072
Identities = 352/423 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 142 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 201
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 261
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || | |||||| |||
Sbjct: 262 tcaaggatgagagattggtccagcatcagcctacacagtatccaactcctgaagagctga 321
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 322 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 381
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 382 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 441
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 442 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 501
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||| | |||||||| |||||||| || || ||||||||||
Sbjct: 502 ccactgtcccattcctgatcctgnggaacaagatcgacatcccttatgccgcttcagagg 561
Query: 567 agg 569
|||
Sbjct: 562 agg 564
>gb|BG556775.1|BG556775 EM1_38_D10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 585
Score = 270 bits (136), Expect = 3e-070
Identities = 352/424 (83%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 132 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 191
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 192 aggccaagatcctcttcctcggcctcgactacgccggcgagaccacgctcctccacatgc 251
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 252 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 311
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 312 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 371
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| | || ||| | |||||||| |||||
Sbjct: 372 tttggaaggattactatgctaaggtggatgcaggggtctaccttgtggatgcctatgaca 431
Query: 447 aggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttg 506
|||| || ||||| ||||| ||||||||||| |||||||| || ||||||||||||| |
Sbjct: 432 aggagcggtttgctgagtcaaagaaggagctagatgcgctcctatcagatgactccctgg 491
Query: 507 caaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagagg 566
| | || || ||||| || ||||| |||||||| |||||||| || || ||||||||||
Sbjct: 492 ccactgtcccattcctgatcctggggaacaagatcgacatcccttatgccgcttcagagg 551
Query: 567 agga 570
||||
Sbjct: 552 agga 555
>gb|CN124370.1|CN124370 RHOH1_4_G03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_4_G03_A002 3', mRNA sequence
Length = 607
Score = 260 bits (131), Expect = 3e-067
Identities = 335/403 (83%)
Strand = Plus / Plus
Query: 326 agcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgc 385
|||||||||| ||||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 2 agcatcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgc 61
Query: 386 gtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgac 445
||||||||||| || ||||| |||||||||||||| || ||| |||| ||||| ||||
Sbjct: 62 gtctggaaggattattacgcaaaggttgatgctgtagtatacctggtagatgcatatgac 121
Query: 446 aaggaacgttttgccgagtcgaagaaggagctcgatgcgcttcttgcagatgactccctt 505
||||| || ||||| || || || |||||||||||||| || || | ||||| ||| |
Sbjct: 122 aaggagcgatttgcagaatcaaaaaaggagctcgatgctctcctgtctgatgattccttg 181
Query: 506 gcaaacgttcctttcctcatactgggcaacaagattgacatcccatacgcggcttcagag 565
|| || ||||| || ||||| || |||||||||||||| |||||||| || || || ||
Sbjct: 182 gccaatgttccatttctcatccttggcaacaagattgatatcccatatgctgcctctgaa 241
Query: 566 gaggagctgaggtactacctcggcctgagcaacttcacaaccgggaagggcaacgtgaac 625
|||||||| |||| |||| ||||| |||||||||||||||||||||||||| || |||
Sbjct: 242 gaggagctacggtatcacctaggccttagcaacttcacaaccgggaagggcaaggtcaac 301
Query: 626 ttggccgactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatg 685
| | ||||||||||||||||| || ||| | |||||||||||||| || |||||||||
Sbjct: 302 cttggtgactccaatgtccggccacttgaggttttcatgtgcagtgttgttcgcaagatg 361
Query: 686 ggctatggcgaaggcttcaaatggatgtctcagtacatcaagt 728
||||| || || || ||||| ||| || |||||||||||||
Sbjct: 362 ggctacggtgatggtttcaagtgggactcccagtacatcaagt 404
>gb|BG240142.1|BG240142 OV1_18_D09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 258 bits (130), Expect = 1e-066
Identities = 193/214 (90%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||||||| |||||||||||| ||||||||||| || || || |||||||||||||
Sbjct: 209 agatgttcctgtgggactggttctacggggtgctggcctccctcggcctgtggcagaagg 268
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 269 aggccaagatcctcttccttggcctcgacaacgccggcaagaccacgctgctccacatgc 328
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| |||||||||||| | || |||||||||||||||||| |||| ||||| |||||| | |
Sbjct: 329 tcaaggacgagcggttggtgcagcaccagccgacgcagcacccgacgtcggaagagctca 388
Query: 327 gcatcggcaggatcaagttcaaggcgttcgacct 360
||||||||| ||||||||||||||| ||||||||
Sbjct: 389 gcatcggcaagatcaagttcaaggccttcgacct 422
>gb|CF756372.1|CF756372 DSAF1_5_E02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_E02_A011 5', mRNA sequence
Length = 459
Score = 256 bits (129), Expect = 4e-066
Identities = 162/173 (93%)
Strand = Plus / Plus
Query: 592 gagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccct 651
||||||||||||||| ||||||||||||||||||||||| || |||||||| || |||||
Sbjct: 1 gagcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgccccct 60
Query: 652 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggat 711
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaatggat 120
Query: 712 gtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||||| | ||| ||||||||| |||||||||||||||
Sbjct: 121 gtctcagtacatcaagtgaggcactgtcgtcctctttcgtccatggcgctgct 173
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 225 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 284
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct: 285 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttc--gg 340
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 341 ggtggtctaaacggttc 357
Score = 65.9 bits (33), Expect = 8e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttcg 1004
|||||||||||||||||||||||||| ||||||||||
Sbjct: 405 ttatgtaatcacgttacatgaagcagtgcattgttcg 441
>gb|CF756458.1|CF756458 DSAF1_5_E02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_E02_A011 3', mRNA sequence
Length = 456
Score = 256 bits (129), Expect = 4e-066
Identities = 162/173 (93%)
Strand = Plus / Plus
Query: 592 gagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccct 651
||||||||||||||| ||||||||||||||||||||||| || |||||||| || |||||
Sbjct: 1 gagcaacttcacaacggggaagggcaacgtgaacttggctgattccaatgttcgccccct 60
Query: 652 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggat 711
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 ggagatcttcatgtgcagtgtggtgcgcaagatgggctatggtgaaggcttcaaatggat 120
Query: 712 gtctcagtacatcaagtgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||||||||||||||||||| | ||| ||||||||| |||||||||||||||
Sbjct: 121 gtctcagtacatcaagtgaggcactgtcgtcctctttcgtccatggcgctgct 173
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 225 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 284
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct: 285 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttc--gg 340
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 341 ggtggtctaaacggttc 357
Score = 65.9 bits (33), Expect = 8e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttcg 1004
|||||||||||||||||||||||||| ||||||||||
Sbjct: 405 ttatgtaatcacgttacatgaagcagtgcattgttcg 441
>gb|CW183802.1|CW183802 104_599_11164809_148_36672_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164809, DNA
sequence
Length = 705
Score = 234 bits (118), Expect = 2e-059
Identities = 133/138 (96%)
Strand = Plus / Plus
Query: 276 agcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggca 335
|||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 508 agcggctcgtgcagcaccagccgacgcagtacccgacgtcagaagagctgagcatcggca 567
Query: 336 ggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaagg 395
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 568 ggatcaagttcaaggccttcgacctcgggggccaccagatcgcccgccgcgtctggaagg 627
Query: 396 actactacgccaaggttg 413
||||||||||||||||||
Sbjct: 628 actactacgccaaggttg 645
Score = 232 bits (117), Expect = 6e-059
Identities = 138/145 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 250 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 309
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 310 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 369
Query: 253 cctcctccacatgctgaaggacgag 277
||||||||||||||| |||||||||
Sbjct: 370 cctcctccacatgctcaaggacgag 394
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 gaggggaagaaatattcttcccgtcgaaa 34
|||||||||||||||||||||||||||||
Sbjct: 125 gaggggaagaaatattcttcccgtcgaaa 153
>gb|CW220477.1|CW220477 104_655_11197369_148_37158_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197369, DNA
sequence
Length = 681
Score = 234 bits (118), Expect = 2e-059
Identities = 133/138 (96%)
Strand = Plus / Plus
Query: 276 agcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggca 335
|||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 56 agcggctcgtgcagcaccagccgacgcagtacccgacgtcagaagagctgagcatcggca 115
Query: 336 ggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaagg 395
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 116 ggatcaagttcaaggccttcgacctcgggggccaccagatcgcccgccgcgtctggaagg 175
Query: 396 actactacgccaaggttg 413
||||||||||||||||||
Sbjct: 176 actactacgccaaggttg 193
>gb|CW260253.1|CW260253 104_726_11228863_148_35188_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228863, DNA
sequence
Length = 680
Score = 234 bits (118), Expect = 2e-059
Identities = 133/138 (96%)
Strand = Plus / Minus
Query: 276 agcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggca 335
|||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 286 agcggctcgtgcagcaccagccgacgcagtacccgacgtcagaagagctgagcatcggca 227
Query: 336 ggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaagg 395
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 226 ggatcaagttcaaggccttcgacctcgggggccaccagatcgcccgccgcgtctggaagg 167
Query: 396 actactacgccaaggttg 413
||||||||||||||||||
Sbjct: 166 actactacgccaaggttg 149
Score = 232 bits (117), Expect = 6e-059
Identities = 138/145 (95%)
Strand = Plus / Minus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 544 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 485
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 484 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 425
Query: 253 cctcctccacatgctgaaggacgag 277
||||||||||||||| |||||||||
Sbjct: 424 cctcctccacatgctcaaggacgag 400
Score = 61.9 bits (31), Expect = 1e-007
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 6 gaggggaagaaatattcttcccgtcgaaa--gacggagagaggaaaagggacaa 57
||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 669 gaggggaagaaatattcttcccgtcgaaaaccagagagagaggaaaagggacaa 616
>gb|CW172766.1|CW172766 104_584_11156467_148_36542_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156467, DNA
sequence
Length = 437
Score = 232 bits (117), Expect = 6e-059
Identities = 138/145 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 201 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 260
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 320
Query: 253 cctcctccacatgctgaaggacgag 277
||||||||||||||| |||||||||
Sbjct: 321 cctcctccacatgctcaaggacgag 345
Score = 58.0 bits (29), Expect = 2e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 gaggggaagaaatattcttcccgtcgaaa 34
|||||||||||||||||||||||||||||
Sbjct: 76 gaggggaagaaatattcttcccgtcgaaa 104
>gb|CW500362.1|CW500362 fsbb001f295k09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295k09, DNA
sequence
Length = 480
Score = 232 bits (117), Expect = 6e-059
Identities = 138/145 (95%)
Strand = Plus / Plus
Query: 133 cgccggagttgtaaagatgttcctggtggactggttctatggggtgctggcatcgcttgg 192
||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 44 cgccggagttgcagagatgttcctggtggactggttctacggggtgctggcgtcgcttgg 103
Query: 193 gctgtggcagaaggaggctaagatcctcttccttggcctcgacaacgccggcaagaccac 252
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 104 gctgtggcagaaggaggcgaagatcctcttcctcggcctcgacaacgccggcaagaccac 163
Query: 253 cctcctccacatgctgaaggacgag 277
||||||||||||||| |||||||||
Sbjct: 164 cctcctccacatgctcaaggacgag 188
Score = 226 bits (114), Expect = 4e-057
Identities = 132/138 (95%)
Strand = Plus / Plus
Query: 276 agcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggca 335
|||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 302 agcggctcgtgcagcaccagccgacgcagtacccgacgtcagaagagctgagcatcggca 361
Query: 336 ggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaagg 395
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 362 ggatcaagttcaaggccttcgacctcgggggccaccagatcgcccgccgcgtctggaagg 421
Query: 396 actactacgccaaggttg 413
||||||||||| ||||||
Sbjct: 422 actactacgcccaggttg 439
>gb|CF757800.1|CF757800 DSAF1_22_E01.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_22_E01_A011 3', mRNA sequence
Length = 441
Score = 232 bits (117), Expect = 6e-059
Identities = 147/157 (93%)
Strand = Plus / Plus
Query: 608 gggaagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcatgtgc 667
||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||
Sbjct: 2 gggaagggcaacgtgaacttggctgattccaatgttcgccccctggagatcttcatgtgc 61
Query: 668 agtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctcagtacatcaag 727
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 62 agtgtggtgcgcaagatgggctatggtgaaggcttcaaatggatgtctcagtacatcaag 121
Query: 728 tgagtcgctgctgtcctcttttgtccatggcgctgct 764
|||| | ||| ||||||||| |||||||||||||||
Sbjct: 122 tgaggcactgtcgtcctctttcgtccatggcgctgct 158
Score = 147 bits (74), Expect = 3e-033
Identities = 124/137 (90%), Gaps = 9/137 (6%)
Strand = Plus / Plus
Query: 801 acatggcagctgcatggaaaggtttatggtagctagtgataggcaaagcttgtaagtcgg 860
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 210 acatggcagctgcatgaaaaggtttatggtagctagtgacaggcaaagcttgtaagttgg 269
Query: 861 tg----ttaatcctagata-tgtgatgtggggtctactttctcttctgattgtttcttgg 915
|| ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||
Sbjct: 270 tgttaattaatcctagatattgtga--tggggtctgctttctcttctgattgtttc--gg 325
Query: 916 ggtggtctaaacggttc 932
|||||||||||||||||
Sbjct: 326 ggtggtctaaacggttc 342
Score = 65.9 bits (33), Expect = 8e-009
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 968 ttatgtaatcacgttacatgaagcagcgcattgttcg 1004
|||||||||||||||||||||||||| ||||||||||
Sbjct: 390 ttatgtaatcacgttacatgaagcagtgcattgttcg 426
>gb|AW678236.1|AW678236 WS1_14_H05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 435
Score = 224 bits (113), Expect = 2e-056
Identities = 263/313 (84%)
Strand = Plus / Plus
Query: 147 agatgttcctggtggactggttctatggggtgctggcatcgcttgggctgtggcagaagg 206
||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 121 agatgtttctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaagg 180
Query: 207 aggctaagatcctcttccttggcctcgacaacgccggcaagaccaccctcctccacatgc 266
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 aggccaagatcctcttcctcggcctcgacaacgccggcaagaccacgctcctccacatgc 240
Query: 267 tgaaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcagaagagttga 326
| ||||| ||| | | || ||||| ||||| || ||||| || || || |||||| |||
Sbjct: 241 tcaaggatgagagattggtccagcatcagcctacacagtatccaacttctgaagagctga 300
Query: 327 gcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcg 386
||||||| | ||||||||||||||| || || | || || || ||||| || ||||| |
Sbjct: 301 gcatcgggaagatcaagttcaaggcatttgatttaggaggacatcagattgctcgccgtg 360
Query: 387 tctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgctgttgaca 446
| |||||||| ||||| || ||||| ||||| || || ||| | |||||||| |||||
Sbjct: 361 tttggaaggattactatgctaaggtggatgcagtggtctaccttgtggatgcctatgaca 420
Query: 447 aggaacgttttgc 459
|||| || |||||
Sbjct: 421 aggagcggtttgc 433
>gb|BG557945.1|BG557945 EM1_39_E11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 441
Score = 224 bits (113), Expect = 2e-056
Identities = 302/365 (82%)
Strand = Plus / Plus
Query: 364 gggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgt 423
||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||
Sbjct: 4 gggccaccagatcgctcgccgcgtctggaaggattattacgcaaaggttgatgctgtagt 63
Query: 424 gtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgatgc 483
||| |||| ||||| ||||||||| || ||||| || || || ||||||||||||||
Sbjct: 64 atacctggtagatgcatatgacaaggagcgatttgcagaatcaaaaaaggagctcgatgc 123
Query: 484 gcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagattga 543
|| || | ||||| ||| | || || ||||| || ||||| || ||||||||||||||
Sbjct: 124 tctcctgtctgatgattccttggccaatgttccatttctcatccttggcaacaagattga 183
Query: 544 catcccatacgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttcac 603
|||||||| || || || || |||||||| |||| |||| ||||| |||||||||||
Sbjct: 184 tatcccatatgctgcctctgaagaggagctacggtatcacctaggccttagcaacttcac 243
Query: 604 aaccgggaagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttcat 663
||||||||||||||| || ||| | | ||||||||||||||||| || ||| | |||||
Sbjct: 244 aaccgggaagggcaaggtcaaccttggtgactccaatgtccggccacttgaggttttcat 303
Query: 664 gtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctcagtacat 723
||||||||| || |||||||||||||| || || || ||||| ||| | || ||||||||
Sbjct: 304 gtgcagtgttgttcgcaagatgggctacggtgatggtttcaagtgggtctcccagtacat 363
Query: 724 caagt 728
|||||
Sbjct: 364 caagt 368
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 346,394
Number of Sequences: 832831
Number of extensions: 346394
Number of successful extensions: 101923
Number of sequences better than 0.5: 225
Number of HSP's better than 0.5 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101050
Number of HSP's gapped (non-prelim): 581
length of query: 1231
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1211
effective length of database: 474,703,049
effective search space: 574865392339
effective search space used: 574865392339
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)