BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE125295.1|BE125295 DG1_18_G10.b1_A002 Dark Grown 1 (DG1... 609 e-172
gb|AW922715.1|AW922715 DG1_45_H05.b1_A002 Dark Grown 1 (DG1... 587 e-166
gb|BE125490.1|BE125490 DG1_26_G10.b1_A002 Dark Grown 1 (DG1... 476 e-132
gb|CW355969.1|CW355969 fsbb001f020n09k0 Sorghum methylation... 353 2e-095
gb|AW747227.1|AW747227 WS1_66_D06.g1_A002 Water-stressed 1 ... 353 2e-095
gb|AW922557.1|AW922557 DG1_45_H05.g1_A002 Dark Grown 1 (DG1... 333 2e-089
gb|BE355413.1|BE355413 DG1_114_G11.b2_A002 Dark Grown 1 (DG... 315 4e-084
gb|BE355480.1|BE355480 DG1_114_G11.g1_A002 Dark Grown 1 (DG... 315 4e-084
gb|BE359180.1|BE359180 DG1_39_F10.b1_A002 Dark Grown 1 (DG1... 315 4e-084
gb|BE359248.1|BE359248 DG1_39_F10.g1_A002 Dark Grown 1 (DG1... 315 4e-084
gb|CD204363.1|CD204363 HS1_7_G03.g1_A012 Heat-shocked seedl... 315 4e-084
gb|CX606604.1|CX606604 ANR1_4_A10.b1_A002 Anaerobic roots S... 315 4e-084
gb|CX606694.1|CX606694 ANR1_4_A10.g1_A002 Anaerobic roots S... 315 4e-084
gb|BE355335.1|BE355335 DG1_114_G11.b1_A002 Dark Grown 1 (DG... 307 9e-082
gb|BM326768.1|BM326768 PIC1_2_E09.g1_A002 Pathogen-infected... 307 9e-082
gb|CW385839.1|CW385839 fsbb001f069h15f0 Sorghum methylation... 303 1e-080
gb|CX611602.1|CX611602 ANR1_25_D06.g1_A002 Anaerobic roots ... 299 2e-079
gb|BG241112.1|BG241112 OV1_38_D01.b1_A002 Ovary 1 (OV1) Sor... 281 5e-074
gb|CX611519.1|CX611519 ANR1_25_D06.b1_A002 Anaerobic roots ... 276 3e-072
gb|BG047679.1|BG047679 OV1_25_C08.b1_A002 Ovary 1 (OV1) Sor... 274 1e-071
gb|BG239817.1|BG239817 OV1_29_D06.g1_A002 Ovary 1 (OV1) Sor... 274 1e-071
gb|BG273284.1|BG273284 OV2_25_C09.g1_A002 Ovary 2 (OV2) Sor... 274 1e-071
gb|BG412657.1|BG412657 OV2_33_B08.b1_A002 Ovary 2 (OV2) Sor... 274 1e-071
gb|BG605799.1|BG605799 RHIZ2_81_F02.g1_A003 Rhizome2 (RHIZ2... 274 1e-071
gb|CX611289.1|CX611289 ANR1_23_G01.g1_A002 Anaerobic roots ... 274 1e-071
gb|AW563280.1|AW563280 LG1_228_H02.g1_A002 Light Grown 1 (L... 272 5e-071
gb|CD231055.1|CD231055 SS1_7_F04.g1_A012 Salt-stressed seed... 272 5e-071
gb|BF421738.1|BF421738 FM1_16_A07.g1_A003 Floral-Induced Me... 270 2e-070
gb|BG273378.1|BG273378 OV2_28_H11.g1_A002 Ovary 2 (OV2) Sor... 268 8e-070
gb|BG240377.1|BG240377 OV1_29_C06.b1_A002 Ovary 1 (OV1) Sor... 266 3e-069
gb|BG412373.1|BG412373 OV2_33_B08.g1_A002 Ovary 2 (OV2) Sor... 266 3e-069
gb|BG241106.1|BG241106 OV1_38_C05.b1_A002 Ovary 1 (OV1) Sor... 262 5e-068
gb|BE125654.1|BE125654 DG1_54_E12.b1_A002 Dark Grown 1 (DG1... 258 8e-067
gb|BE362770.1|BE362770 DG1_89_D05.b1_A002 Dark Grown 1 (DG1... 258 8e-067
gb|BG239807.1|BG239807 OV1_29_C06.g1_A002 Ovary 1 (OV1) Sor... 258 8e-067
gb|CW046386.1|CW046386 104_283_10510161_114_30137 Sorghum m... 256 3e-066
gb|BE359579.1|BE359579 DG1_54_E12.g2_A002 Dark Grown 1 (DG1... 256 3e-066
gb|BE362832.1|BE362832 DG1_89_D05.g2_A002 Dark Grown 1 (DG1... 256 3e-066
gb|BG240387.1|BG240387 OV1_29_D06.b1_A002 Ovary 1 (OV1) Sor... 256 3e-066
gb|CW060299.1|CW060299 104_303_10519777_1_30041 Sorghum met... 254 1e-065
gb|CW060389.1|CW060389 104_303_10519825_1_30042 Sorghum met... 254 1e-065
gb|CW418806.1|CW418806 fsbb001f123g10f0 Sorghum methylation... 254 1e-065
gb|CW460985.1|CW460985 fsbb001f208h03k0 Sorghum methylation... 254 1e-065
gb|AW681166.1|AW681166 WS1_9_E11.g1_A002 Water-stressed 1 (... 250 2e-064
gb|BF317912.1|BF317912 OV1_9_C08.b1_A002 Ovary 1 (OV1) Sorg... 250 2e-064
gb|BF421188.1|BF421188 FM1_6_E07.b1_A003 Floral-Induced Mer... 250 2e-064
gb|BG240788.1|BG240788 OV1_38_C05.g1_A002 Ovary 1 (OV1) Sor... 250 2e-064
gb|AW287442.2|AW287442 LG1_228_A03.b1_A002 Light Grown 1 (L... 236 3e-060
gb|AW287488.2|AW287488 LG1_228_F02.b1_A002 Light Grown 1 (L... 236 3e-060
gb|AW564126.1|AW564126 LG1_282_E07.b1_A002 Light Grown 1 (L... 236 3e-060
gb|CX611213.1|CX611213 ANR1_23_G01.b1_A002 Anaerobic roots ... 234 1e-059
gb|BG048918.1|BG048918 OV1_24_G11.b1_A002 Ovary 1 (OV1) Sor... 232 4e-059
gb|BG273405.1|BG273405 OV2_25_C09.b1_A002 Ovary 2 (OV2) Sor... 226 3e-057
gb|BG273701.1|BG273701 OV2_28_H11.b1_A002 Ovary 2 (OV2) Sor... 226 3e-057
gb|CW248743.1|CW248743 104_710_11222463_148_35033_060 Sorgh... 224 1e-056
gb|AW922375.1|AW922375 DG1_18_G10.g1_A002 Dark Grown 1 (DG1... 222 4e-056
gb|BE125721.1|BE125721 DG1_54_E12.g1_A002 Dark Grown 1 (DG1... 222 4e-056
gb|AW923034.1|AW923034 DG1_48_B09.g1_A002 Dark Grown 1 (DG1... 216 3e-054
gb|CN128228.1|CN128228 RHOH1_28_A09.b1_A002 Acid- and alkal... 216 3e-054
gb|BF421113.1|BF421113 FM1_6_E07.g1_A003 Floral-Induced Mer... 210 2e-052
gb|CF073898.1|CF073898 FE1_9_H09.b1_A002 Iron-deficient see... 208 6e-052
gb|AW922990.1|AW922990 DG1_48_B09.b1_A002 Dark Grown 1 (DG1... 206 3e-051
gb|BF585848.1|BF585848 FM1_25_C04.g1_A003 Floral-Induced Me... 206 3e-051
gb|BG049201.1|BG049201 OV1_24_G11.g1_A002 Ovary 1 (OV1) Sor... 206 3e-051
gb|BF317858.1|BF317858 OV1_10_E11.g1_A002 Ovary 1 (OV1) Sor... 192 4e-047
gb|BM322282.1|BM322282 PIC1_2_E09.b1_A002 Pathogen-infected... 188 6e-046
gb|BF481069.1|BF481069 FM1_16_A07.b1_A003 Floral-Induced Me... 184 9e-045
gb|AW563311.1|AW563311 LG1_228_B09.g1_A002 Light Grown 1 (L... 168 6e-040
gb|BF318001.1|BF318001 OV1_10_E11.b1_A002 Ovary 1 (OV1) Sor... 163 3e-038
gb|BF585929.1|BF585929 FM1_25_C04.b1_A003 Floral-Induced Me... 159 5e-037
gb|CW304566.1|CW304566 104_789_11465849_116_35703_071 Sorgh... 153 3e-035
gb|CX609162.1|CX609162 ANR1_11_B12.b1_A002 Anaerobic roots ... 153 3e-035
gb|CX609246.1|CX609246 ANR1_11_B12.g1_A002 Anaerobic roots ... 153 3e-035
gb|CW043694.1|CW043694 104_279_10508524_114_30274 Sorghum m... 147 2e-033
gb|CW407180.1|CW407180 fsbb001f100i16f0 Sorghum methylation... 147 2e-033
gb|CW434624.1|CW434624 fsbb001f150g17k0 Sorghum methylation... 147 2e-033
gb|CW259226.1|CW259226 104_725_11228308_148_35179_008 Sorgh... 143 3e-032
gb|BF317996.1|BF317996 OV1_10_E06.b1_A002 Ovary 1 (OV1) Sor... 141 1e-031
gb|CW304567.1|CW304567 104_789_11465849_148_35707_071 Sorgh... 139 5e-031
gb|BG047908.1|BG047908 OV1_25_C08.g1_A002 Ovary 1 (OV1) Sor... 139 5e-031
gb|AW283924.1|AW283924 LG1_282_E07.g1_A002 Light Grown 1 (L... 137 2e-030
gb|BG050715.1|BG050715 FM1_72_B01.g1_A003 Floral-Induced Me... 137 2e-030
gb|BG050431.1|BG050431 FM1_69_B02.g1_A003 Floral-Induced Me... 133 3e-029
gb|BG050243.1|BG050243 FM1_68_E02.b1_A003 Floral-Induced Me... 129 5e-028
gb|CF481385.1|CF481385 POL1_71_D12.g1_A002 Pollen Sorghum b... 125 7e-027
gb|CW046387.1|CW046387 104_283_10510161_115_30138 Sorghum m... 113 3e-023
gb|CW257765.1|CW257765 104_723_11227512_148_35155_090 Sorgh... 113 3e-023
gb|BG240795.1|BG240795 OV1_38_D01.g1_A002 Ovary 1 (OV1) Sor... 113 3e-023
gb|AW285856.2|AW285856 LG1_251_A02.b1_A002 Light Grown 1 (L... 105 7e-021
gb|AW563481.1|AW563481 LG1_235_D10.b1_A002 Light Grown 1 (L... 105 7e-021
gb|AW678231.1|AW678231 WS1_14_E12.b1_A002 Water-stressed 1 ... 105 7e-021
gb|AW680225.1|AW680225 WS1_50_G10.g1_A002 Water-stressed 1 ... 105 7e-021
gb|BE355851.1|BE355851 DG1_11_E06.b1_A002 Dark Grown 1 (DG1... 105 7e-021
gb|BE355899.1|BE355899 DG1_11_E06.g1_A002 Dark Grown 1 (DG1... 105 7e-021
gb|BE359335.1|BE359335 DG1_40_E09.b1_A002 Dark Grown 1 (DG1... 105 7e-021
gb|BE359367.1|BE359367 DG1_40_E09.g1_A002 Dark Grown 1 (DG1... 105 7e-021
gb|BE363859.1|BE363859 PI1_10_C08.b1_A002 Pathogen induced ... 105 7e-021
gb|BE592295.1|BE592295 WS1_90_H08.g1_A002 Water-stressed 1 ... 105 7e-021
gb|BE592827.1|BE592827 WS1_90_H08.b1_A002 Water-stressed 1 ... 105 7e-021
gb|BF176746.1|BF176746 EM1_4_F06.g1_A002 Embryo 1 (EM1) Sor... 105 7e-021
gb|BF176941.1|BF176941 EM1_4_F06.b1_A002 Embryo 1 (EM1) Sor... 105 7e-021
gb|BG047767.1|BG047767 OV1_27_E09.b1_A002 Ovary 1 (OV1) Sor... 105 7e-021
gb|BG048092.1|BG048092 OV1_27_E09.g1_A002 Ovary 1 (OV1) Sor... 105 7e-021
gb|BG240575.1|BG240575 OV1_31_F03.b1_A002 Ovary 1 (OV1) Sor... 105 7e-021
gb|BG322703.1|BG322703 EM1_13_C05.b1_A002 Embryo 1 (EM1) So... 105 7e-021
gb|BG322964.1|BG322964 EM1_13_C05.g1_A002 Embryo 1 (EM1) So... 105 7e-021
gb|CD429227.1|CD429227 ETH1_3_A04.b1_A002 Ethylene-treated ... 105 7e-021
gb|CD429280.1|CD429280 ETH1_3_A04.g1_A002 Ethylene-treated ... 105 7e-021
gb|CW248742.1|CW248742 104_710_11222463_116_35037_060 Sorgh... 100 4e-019
gb|BF587404.1|BF587404 FM1_36_A04.b1_A003 Floral-Induced Me... 90 4e-016
gb|CW302202.1|CW302202 104_786_11464598_148_35669_059 Sorgh... 84 3e-014
gb|CW072213.1|CW072213 104_325_10592134_114_30538 Sorghum m... 80 4e-013
gb|CW379559.1|CW379559 fsbb001f058o04k0 Sorghum methylation... 80 4e-013
gb|CW385840.1|CW385840 fsbb001f069h15k0 Sorghum methylation... 80 4e-013
gb|CL150668.1|CL150668 104_332_10778695_114_31357_247 Sorgh... 76 6e-012
gb|CL150669.1|CL150669 104_332_10778695_116_31358_247 Sorgh... 76 6e-012
gb|CL166055.1|CL166055 104_361_10809096_116_31821_312 Sorgh... 76 6e-012
gb|CW097759.1|CW097759 104_464_11002640_116_34363_032 Sorgh... 76 6e-012
gb|CW241483.1|CW241483 104_700_11218796_116_37544_070 Sorgh... 76 6e-012
gb|CW414765.1|CW414765 fsbb001f114j08f0 Sorghum methylation... 76 6e-012
gb|CW414766.1|CW414766 fsbb001f114j08k0 Sorghum methylation... 76 6e-012
gb|CW418215.1|CW418215 fsbb001f121j08f0 Sorghum methylation... 76 6e-012
gb|DR831451.2|DR831451 MM20 Sorghum bicolor greenbug-respon... 76 6e-012
gb|BF657617.1|BF657617 OV2_17_D10.g1_A002 Ovary 2 (OV2) Sor... 74 2e-011
gb|BZ334418.1|BZ334418 hx79c08.b1 WGS-SbicolorF (JM107 adap... 68 2e-009
gb|CW033771.1|CW033771 104_263_10502148_114_30359 Sorghum m... 68 2e-009
gb|AW924145.1|AW924145 WS1_50_G10.b1_A002 Water-stressed 1 ... 68 2e-009
gb|BG158966.1|BG158966 RHIZ2_41_A03.b1_A003 Rhizome2 (RHIZ2... 68 2e-009
gb|CF758372.1|CF758372 DSAF1_31_A03.g1_A011 Drought-stresse... 68 2e-009
gb|CN142349.1|CN142349 WOUND1_9_A09.g1_A002 Wounded leaves ... 68 2e-009
gb|CW182268.1|CW182268 104_597_11163977_148_36660_069 Sorgh... 66 6e-009
gb|CW394165.1|CW394165 fsbb001f081j14f0 Sorghum methylation... 66 6e-009
gb|CW088493.1|CW088493 104_433_10948188_114_32573_040 Sorgh... 60 4e-007
gb|CW091342.1|CW091342 104_453_10998493_114_33028_059 Sorgh... 60 4e-007
gb|CW091343.1|CW091343 104_453_10998493_116_33032_059 Sorgh... 60 4e-007
gb|CW309170.1|CW309170 104_797_11469055_148_35725_018 Sorgh... 60 4e-007
gb|CW241484.1|CW241484 104_700_11218796_148_37543_070 Sorgh... 56 6e-006
gb|CW419626.1|CW419626 fsbb001f124j02k0 Sorghum methylation... 56 6e-006
gb|CW430078.1|CW430078 fsbb001f143k02f0 Sorghum methylation... 52 9e-005
gb|CW033772.1|CW033772 104_263_10502148_115_30360 Sorghum m... 50 4e-004
gb|CW103854.1|CW103854 104_472_11012113_148_34434_003 Sorgh... 50 4e-004
gb|CW346070.1|CW346070 104_849_11488830_116_36220_025 Sorgh... 50 4e-004
gb|CW346071.1|CW346071 104_849_11488830_148_36219_025 Sorgh... 50 4e-004
gb|CW352586.1|CW352586 fsbb001f014p03f0 Sorghum methylation... 50 4e-004
gb|CW417587.1|CW417587 fsbb001f120k17k0 Sorghum methylation... 50 4e-004
gb|BE597257.1|BE597257 PI1_70_A09.g1_A002 Pathogen induced ... 50 4e-004
gb|CN142278.1|CN142278 WOUND1_9_A09.b1_A002 Wounded leaves ... 50 4e-004
gb|CW057927.1|CW057927 104_300_10518476_5_30082 Sorghum met... 48 0.001
gb|CW198525.1|CW198525 104_623_11183020_148_36847_012 Sorgh... 48 0.001
gb|CW432189.1|CW432189 fsbb001f146m08f0 Sorghum methylation... 48 0.001
gb|CX614033.1|CX614033 GABR1_11_D12.g1_A002 GA- or brassino... 48 0.001
gb|CN125761.1|CN125761 RHOH1_13_D05.b1_A002 Acid- and alkal... 46 0.006
gb|CN125836.1|CN125836 RHOH1_13_D05.g1_A002 Acid- and alkal... 46 0.006
gb|BG050567.1|BG050567 FM1_69_B02.b1_A003 Floral-Induced Me... 44 0.022
gb|BG048658.1|BG048658 OV1_21_D07.b1_A002 Ovary 1 (OV1) Sor... 42 0.086
gb|CW097760.1|CW097760 104_464_11002640_148_34367_032 Sorgh... 40 0.34
gb|CW241184.1|CW241184 104_700_11218627_148_37540_076 Sorgh... 40 0.34
>gb|BE125295.1|BE125295 DG1_18_G10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 609 bits (307), Expect = e-172
Identities = 364/383 (95%)
Strand = Plus / Plus
Query: 81 gccggagcaaaggtggtgaagaaggccgcggcggggcgtcgcggcgggggcggccccaag 140
||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 8 gccggagcaaaggtgccgaagaaggccgcggcagggcgtcgcggcggcggcggcccgaag 67
Query: 141 aagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcggc 200
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 68 aagaagccggtctctcgctccgtgaaggccggcctccagttccccgtcggccgtatcggc 127
Query: 201 cgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacctc 260
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 128 cgctacctcaagcagggtcgctacgcccagcgtatcggcaccggcgcccccgtctacctc 187
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 188 gccgccgtcctcgagtacctcgccgccgaggtcctcgagttggcggggaacgcagcgcgg 247
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatgag 380
||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 248 gacaacaagaaaaaccggatcatcccgcggcacgtactgctggcgatccgcatcgacgag 307
Query: 381 gagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacatc 440
|||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 308 gagctcgggaagctgctggccggcgtcaccatcgcgcatggcggggttctgcccaacatc 367
Query: 441 aaccctgtgctgctccccaagaa 463
||||||||| ||||||| |||||
Sbjct: 368 aaccctgtgttgctcccaaagaa 390
>gb|AW922715.1|AW922715 DG1_45_H05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 587 bits (296), Expect = e-166
Identities = 344/360 (95%)
Strand = Plus / Plus
Query: 56 cacgggggcttgatcgaagatggatgccggagcaaaggtggtgaagaaggccgcggcggg 115
||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 28 cacgggggctttatcggagatggatgccggagcaaaggtgccgaagaaggccgcggcagg 87
Query: 116 gcgtcgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcct 175
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gcgtcgcggcggcggcggcccgaagaagaagccggtctctcgctccgtgaaggccggcct 147
Query: 176 ccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgt 235
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 148 ccagttccccgtcggccgtatcggccgctacctcaagcagggtcgctacgcccagcgtat 207
Query: 236 cggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcct 295
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 208 cggcaccggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtcct 267
Query: 296 cgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgt 355
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 268 cgagttggcggggaacgcagcgcgggacaacaagaaaaaccggatcatcccgcggcacgt 327
Query: 356 actgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgc 415
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 328 actgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgc 387
>gb|BE125490.1|BE125490 DG1_26_G10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 301
Score = 476 bits (240), Expect = e-132
Identities = 279/292 (95%)
Strand = Plus / Plus
Query: 81 gccggagcaaaggtggtgaagaaggccgcggcggggcgtcgcggcgggggcggccccaag 140
||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 8 gccggagcaaaggtgccgaagaaggccgcggcagggcgtcgcggcggcggcggcccgaag 67
Query: 141 aagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcggc 200
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 68 aagaagccggtctctcgctccgtgaaggccggcctccagttccccgtcggccgtatcggc 127
Query: 201 cgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacctc 260
|||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||
Sbjct: 128 cgctacctcaagcagggtcgctacgcccagcgtatcggcaccggcgcccccgtgtacctc 187
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 188 gccgccgtcctcgagtacctcgccgccgaggtcctcgagttggcggggaacgcagcgcgg 247
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgca 372
||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 248 gacaacaagaaaaaccggatcatcccgcggcacgtactgctggcgatccgca 299
>gb|CW355969.1|CW355969 fsbb001f020n09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f020n09, DNA
sequence
Length = 715
Score = 353 bits (178), Expect = 2e-095
Identities = 234/252 (92%), Gaps = 3/252 (1%)
Strand = Plus / Minus
Query: 292 tcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgac 351
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 616 tcctcgagttggcggggaacgcagcgcgggacaacaagaaaaaccggatcatcccgcggc 557
Query: 352 acgtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcacca 411
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 556 acgtactgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcacca 497
Query: 412 tcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccgctg 471
|||| || |||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 496 tcgcgcatggcggggttctgcccaacatcaaccctgtgttgctcccaaagaagaccgctg 437
Query: 472 tcgctgctgccaaggaaggcaaagagaagaagtcacccaagaaggccgccgccgccaagt 531
||| || |||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 436 ccgccgccgccaaggagggcaaagagaagaagtcacccaagaaggccgccacc---aagt 380
Query: 532 cgcccaaaaagg 543
||||||| ||||
Sbjct: 379 cgcccaagaagg 368
Score = 250 bits (126), Expect = 2e-064
Identities = 239/272 (87%), Gaps = 6/272 (2%)
Strand = Plus / Minus
Query: 587 ctctgtcctctctgaactgaaacgctcctagctgtcgttgtcggtcatggtcgttgttgt 646
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 313 ctctgtccgctctgaactgaaacgctcctagctgtcgttgtcggtcaaggtcgttgttgc 254
Query: 647 ttgatgcgcttttattgtggttgttcgtgtgtaattgcttgcctttcgcccatttggcat 706
||||| || ||| |||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 253 ttgat--gcatttgttgtggttgttcgtgtgtaattgcgcgcctttcgcccaatccgcat 196
Query: 707 gcactgtgtagggtcacactggtctaggttttcaatctgggaaacaccggtttagattca 766
| |||||||||| | |||||||| |||| |||| ||||| ||||| | ||||||||||||
Sbjct: 195 gtactgtgtaggttgacactggtttagg-tttcgatctgtgaaacgctggtttagattca 137
Query: 767 agga--gcgtgaactgtgaa-ggcaggtgagagggtgggatctgtgaatcactaggtgct 823
|||| | |||| ||||||| |||||| || ||||||||||||||||||| ||| ||||
Sbjct: 136 aggagtgtgtgagctgtgaagggcaggggatggggtgggatctgtgaatcattagatgct 77
Query: 824 gtttgtaataagattgcaaagatgtgtaaaat 855
||||||||||| ||||| ||||||||||||||
Sbjct: 76 gtttgtaataatattgcgaagatgtgtaaaat 45
>gb|AW747227.1|AW747227 WS1_66_D06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 601
Score = 353 bits (178), Expect = 2e-095
Identities = 234/252 (92%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 292 tcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgac 351
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 15 tcctcgagttggcggggaacgcagcgcgggacaacaagaaaaaccggatcatcccgcggc 74
Query: 352 acgtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcacca 411
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 75 acgtactgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcacca 134
Query: 412 tcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccgctg 471
|||| || |||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 135 tcgcgcatggcggggttctgcccaacatcaaccctgtgttgctcccaaagaagaccgctg 194
Query: 472 tcgctgctgccaaggaaggcaaagagaagaagtcacccaagaaggccgccgccgccaagt 531
||| || |||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 195 ccgccgccgccaaggagggcaaagagaagaagtcacccaagaaggccgccacc---aagt 251
Query: 532 cgcccaaaaagg 543
||||||| ||||
Sbjct: 252 cgcccaagaagg 263
Score = 258 bits (130), Expect = 8e-067
Identities = 249/284 (87%), Gaps = 6/284 (2%)
Strand = Plus / Plus
Query: 587 ctctgtcctctctgaactgaaacgctcctagctgtcgttgtcggtcatggtcgttgttgt 646
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 318 ctctgtccgctctgaactgaaacgctcctagctgtcgttgtcggtcaaggtcgttgttgc 377
Query: 647 ttgatgcgcttttattgtggttgttcgtgtgtaattgcttgcctttcgcccatttggcat 706
||||| || ||| |||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 378 ttgat--gcatttgttgtggttgttcgtgtgtaattgcgcgcctttcgcccaatccgcat 435
Query: 707 gcactgtgtagggtcacactggtctaggttttcaatctgggaaacaccggtttagattca 766
| |||||||||| | |||||||| |||| |||| ||||| ||||| | ||||||||||||
Sbjct: 436 gtactgtgtaggttgacactggtttagg-tttcgatctgtgaaacgctggtttagattca 494
Query: 767 agga--gcgtgaactgtgaa-ggcaggtgagagggtgggatctgtgaatcactaggtgct 823
|||| | |||| ||||||| |||||| || ||||||||||||||||||| ||| ||||
Sbjct: 495 aggagtgtgtgagctgtgaagggcaggggatggggtgggatctgtgaatcattagatgct 554
Query: 824 gtttgtaataagattgcaaagatgtgtaaaatttgttttgtgct 867
||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 555 gtttgtaataatattgcgaagatgtgtaaaatccgttttgtgct 598
>gb|AW922557.1|AW922557 DG1_45_H05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 333 bits (168), Expect = 2e-089
Identities = 224/242 (92%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 302 ggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgct 361
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1 ggcggggaacgcagcgcgggacaacaagaaaaaccggatcatcccgcggcacgtactgct 60
Query: 362 ggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacgg 421
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 61 ggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcatgg 120
Query: 422 cggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccgctgtcgctgctgc 481
|||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||| || ||
Sbjct: 121 cggggttctgcccaacatcaaccctgtgttgctcccaaagaagaccgctgccgccgccgc 180
Query: 482 caaggaaggcaaagagaagaagtcacccaagaaggccgccgccgccaagtcgcccaaaaa 541
|||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 181 caaggagggcaaagagaagaagtcacccaagaaggccgccacc---aagtcgcccaagaa 237
Query: 542 gg 543
||
Sbjct: 238 gg 239
Score = 240 bits (121), Expect = 2e-061
Identities = 236/271 (87%), Gaps = 5/271 (1%)
Strand = Plus / Plus
Query: 587 ctctgtcctctctgaactgaaacgctcctagctgtcgttgtcggtcatggtcgttgttgt 646
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 294 ctctgtccgctctgaactgaaacgctcctagctgtcgttgtcggtcaaggtcgttgttgc 353
Query: 647 ttgatgcgcttttattgtggttgttcgtgtgtaattgcttgcctttcgcccatttggcat 706
||||| || ||| |||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 354 ttgat--gcatttgttgtggttgttcgtgtgtaattgcgcgcctttcgcccaatccgcat 411
Query: 707 gcactgtgtagggtcacactggtctaggttttcaatctgggaaacaccggtttagattca 766
| |||||||||| | |||||||| |||| |||| ||||| ||||| | ||||||||||||
Sbjct: 412 gtactgtgtaggttgacactggtttagg-tttcgatctgtgaaacgctggtttagattca 470
Query: 767 agga--gcgtgaactgtgaaggcaggtgagagggtgggatctgtgaatcactaggtgctg 824
|||| | |||| |||| | |||||| || ||||||||||||||||||| ||| |||||
Sbjct: 471 aggagtgtgtgagctgtaagggcaggggatggggtgggatctgtgaatcattagatgctg 530
Query: 825 tttgtaataagattgcaaagatgtgtaaaat 855
|||||||||| ||||| |||| |||||||||
Sbjct: 531 tttgtaataatattgcgaagaagtgtaaaat 561
>gb|BE355413.1|BE355413 DG1_114_G11.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 129 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 188
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 189 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 248
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 249 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 308
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 309 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 368
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 369 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 428
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 429 ctccccaacatcaacccggtgctcctgcccaagaa 463
>gb|BE355480.1|BE355480 DG1_114_G11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 120 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 179
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 180 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 239
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 240 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 299
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 300 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 359
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 360 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 419
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 420 ctccccaacatcaacccggtgctcctgcccaagaa 454
>gb|BE359180.1|BE359180 DG1_39_F10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 469
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 129 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 188
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 189 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 248
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 249 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 308
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 309 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 368
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 369 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 428
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 429 ctccccaacatcaacccggtgctcctgcccaagaa 463
>gb|BE359248.1|BE359248 DG1_39_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 607
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 129 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 188
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 189 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 248
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 249 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 308
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 309 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 368
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 369 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 428
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 429 ctccccaacatcaacccggtgctcctgcccaagaa 463
>gb|CD204363.1|CD204363 HS1_7_G03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_G03_A012 5', mRNA sequence
Length = 538
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 152 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 211
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 212 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 271
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 272 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 331
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 332 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 391
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 392 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 451
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 452 ctccccaacatcaacccggtgctcctgcccaagaa 486
>gb|CX606604.1|CX606604 ANR1_4_A10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_A10_A002 3', mRNA sequence
Length = 669
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 113 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 172
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 173 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 232
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 233 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 292
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 293 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 352
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 353 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 412
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 413 ctccccaacatcaacccggtgctcctgcccaagaa 447
>gb|CX606694.1|CX606694 ANR1_4_A10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_A10_A002 5', mRNA sequence
Length = 713
Score = 315 bits (159), Expect = 4e-084
Identities = 291/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 137 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 196
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 197 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 256
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 257 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 316
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 317 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 376
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 377 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 436
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||||| || ||||||||
Sbjct: 437 ctccccaacatcaacccggtgctcctgcccaagaa 471
>gb|BE355335.1|BE355335 DG1_114_G11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 307 bits (155), Expect = 9e-082
Identities = 281/323 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 129 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 188
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 189 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 248
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 249 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 308
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 309 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 368
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 369 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 428
Query: 429 ctgcccaacatcaaccctgtgct 451
|| |||||||||||||| |||||
Sbjct: 429 ctccccaacatcaacccggtgct 451
>gb|BM326768.1|BM326768 PIC1_2_E09.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 537
Score = 307 bits (155), Expect = 9e-082
Identities = 287/331 (86%)
Strand = Plus / Plus
Query: 133 gccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggcc 192
|||||| ||||||| |||| || || ||||| |||||||| || ||||||||||| ||||
Sbjct: 1 gccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtcggcc 60
Query: 193 gtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccg 252
| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||||||
Sbjct: 61 gcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcccccg 120
Query: 253 tctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacg 312
|||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||||||
Sbjct: 121 tctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccgggaacg 180
Query: 313 cagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgca 372
| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||||||
Sbjct: 181 cggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatccgca 240
Query: 373 acgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgc 432
|||| ||||||||||||||||| |||||||||||||||||||| |||||||| || || |
Sbjct: 241 acgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtcctcc 300
Query: 433 ccaacatcaaccctgtgctgctccccaagaa 463
||||||||||||| ||||| || ||||||||
Sbjct: 301 ccaacatcaacccggtgctcctgcccaagaa 331
>gb|CW385839.1|CW385839 fsbb001f069h15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f069h15, DNA
sequence
Length = 723
Score = 303 bits (153), Expect = 1e-080
Identities = 276/317 (87%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 407 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 466
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 467 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 526
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 527 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 586
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 587 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 646
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 647 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 706
Query: 429 ctgcccaacatcaaccc 445
|| ||||||||||||||
Sbjct: 707 ctccccaacatcaaccc 723
>gb|CX611602.1|CX611602 ANR1_25_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_D06_A002 5', mRNA sequence
Length = 692
Score = 299 bits (151), Expect = 2e-079
Identities = 289/335 (86%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| | || || || ||||| |||||||| || |||||||||||
Sbjct: 136 ggcggccccaggaagaagtccgtgtcgcggtccgtcaaggccgggctgcagttccccgtc 195
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 196 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 255
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
|||||||||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 256 cccgtctacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 315
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 316 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatc 375
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 376 cgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggcgtc 435
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||| |||| ||||| || ||||||||
Sbjct: 436 ctccccaacatcgacccggtgctcctgcccaagaa 470
>gb|BG241112.1|BG241112 OV1_38_D01.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 399
Score = 281 bits (142), Expect = 5e-074
Identities = 265/306 (86%)
Strand = Plus / Plus
Query: 138 aagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatc 197
|||||||||||||| || || ||||| |||||||| || |||||||| || ||||| |||
Sbjct: 91 aagaagaagccggtgtcgcggtccgtcaaggccgggctgcagttcccggtgggccgcatc 150
Query: 198 ggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctac 257
|| || ||||| ||| ||||||| ||| | ||||| || ||||| ||||| |||||||||
Sbjct: 151 gggcggtacctgaagaagggtcggtacgcgcagcgcgtgggcacgggcgcgcccgtctac 210
Query: 258 ctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcg 317
||||| ||||||||||||||||||||||||||| |||| ||| ||||||| ||||| |||
Sbjct: 211 ctcgccgccgtcctcgagtacctcgccgccgaggtccttgagctggcgggcaacgcggcg 270
Query: 318 cgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgat 377
|| ||||||||||||||||| ||||||||||| ||||| || || || |||||||||||
Sbjct: 271 cgcgacaacaagaagaaccgcatcatcccgcgccacgtcctcctcgccatccgcaacgac 330
Query: 378 gaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaac 437
||||||||||| ||||| ||||| |||||||||||||| |||||||| || || ||||||
Sbjct: 331 gaggagctcggcaagctgctggcgggcgtcaccatcgcccacggcggcgtgctccccaac 390
Query: 438 atcaac 443
||||||
Sbjct: 391 atcaac 396
>gb|CX611519.1|CX611519 ANR1_25_D06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_D06_A002 3', mRNA sequence
Length = 668
Score = 276 bits (139), Expect = 3e-072
Identities = 286/335 (85%)
Strand = Plus / Plus
Query: 129 ggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgta 188
|||||||||| ||||||| |||| || || ||||| |||||||| || |||||||||||
Sbjct: 111 ggcggccccaggaagaagtcggtgtcgcggtccgtcaaggccgggctgcagttccccgtc 170
Query: 189 ggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcc 248
||||| ||||| || ||||||||| |||| || ||| | ||||| || ||||||||||||
Sbjct: 171 ggccgcatcggtcggtacctcaagaagggccggtacgcgcagcgcgtgggcaccggcgcc 230
Query: 249 cccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgggg 308
||||| |||||||| |||||||| |||||||||||||||||| | || ||| |||| |||
Sbjct: 231 cccgtttacctcgcagccgtcctggagtacctcgccgccgaggtgctggagctggccggg 290
Query: 309 aacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatc 368
||||| ||| ||||||||||||||| || ||||||||||| ||||| | ||||| |||
Sbjct: 291 aacgcggcgagggacaacaagaagacgcgcatcatcccgcgccacgtgttcctggccatc 350
Query: 369 cgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggtt 428
|||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| || ||
Sbjct: 351 cgcaacgacgaggagctcgggaagctgctggccggggtcaccatcgcgcacgggggcgtc 410
Query: 429 ctgcccaacatcaaccctgtgctgctccccaagaa 463
|| |||||||||||||| ||| | || ||||||||
Sbjct: 411 ctccccaacatcaacccggtgttcctgcccaagaa 445
>gb|BG047679.1|BG047679 OV1_25_C08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 167 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 226
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 227 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 286
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 287 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 346
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 347 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 406
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 407 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 466
Query: 462 aa 463
||
Sbjct: 467 aa 468
>gb|BG239817.1|BG239817 OV1_29_D06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 26 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 85
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 86 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 145
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 146 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 205
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 206 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 265
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 266 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 325
Query: 462 aa 463
||
Sbjct: 326 aa 327
>gb|BG273284.1|BG273284 OV2_25_C09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 528
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 25 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 84
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 85 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 144
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 145 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 204
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 205 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 264
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 265 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 324
Query: 462 aa 463
||
Sbjct: 325 aa 326
>gb|BG412657.1|BG412657 OV2_33_B08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 162 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 221
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 222 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 281
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 282 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 341
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 342 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 401
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 402 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 461
Query: 462 aa 463
||
Sbjct: 462 aa 463
>gb|BG605799.1|BG605799 RHIZ2_81_F02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 524
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 26 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 85
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 86 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 145
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 146 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 205
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 206 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 265
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 266 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 325
Query: 462 aa 463
||
Sbjct: 326 aa 327
>gb|CX611289.1|CX611289 ANR1_23_G01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_G01_A002 5', mRNA sequence
Length = 646
Score = 274 bits (138), Expect = 1e-071
Identities = 261/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 174 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 233
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 234 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 293
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 294 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 353
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 354 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 413
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 414 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 473
Query: 462 aa 463
||
Sbjct: 474 aa 475
>gb|AW563280.1|AW563280 LG1_228_H02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 633
Score = 272 bits (137), Expect = 5e-071
Identities = 263/305 (86%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || |||||||| || ||||| ||||| || ||||| ||| |||||
Sbjct: 8 tccgtcaaggccgggctgcagttcccggtgggccgcatcgggcggtacctgaagaagggt 67
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 68 cggtacgcgcagcgcgtgggcacgggcgcgcccgtctacctcgccgccgtcctcgagtac 127
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| |||| ||| ||||||| ||||| ||||| |||||||||||||||||
Sbjct: 128 ctcgccgccgaggtccttgagctggcgggcaacgcggcgcgcgacaacaagaagaaccgc 187
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || || || ||||||||||| ||||||||||| ||||| |||
Sbjct: 188 atcatcccgcgccacgtcctcctcgccatccgcaacgacgaggagctcggcaagctgctg 247
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
|| |||||||||||||| |||||||| || || |||||||||||| | || || ||||||
Sbjct: 248 gcgggcgtcaccatcgcccacggcggcgtgctccccaacatcaactccgtcctcctcccc 307
Query: 459 aagaa 463
|||||
Sbjct: 308 aagaa 312
Score = 67.9 bits (34), Expect = 2e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 501 aagtcacccaagaaggccgccgccgccaagtcgcccaa 538
||||| ||||||||||||||||||||||||||||||||
Sbjct: 350 aagtcgcccaagaaggccgccgccgccaagtcgcccaa 387
>gb|CD231055.1|CD231055 SS1_7_F04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_F04_A012 5', mRNA sequence
Length = 612
Score = 272 bits (137), Expect = 5e-071
Identities = 263/305 (86%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| |||||||||||||| ||||| ||||| |||||||| ||| ||||
Sbjct: 170 tccgttaaggccgggctccagttccccgtcggccgcatcgggcgctaccttaagaagggc 229
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 230 cggtacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtac 289
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||| ||| | || ||| | || |||||||| || ||||||||||||||| ||
Sbjct: 290 ctcgccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgc 349
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
|||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 350 atcatcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctg 409
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
|||| ||||||||||| |||||||| || |||||||||||||||| || ||||| |||
Sbjct: 410 tccggtgtcaccatcgcccacggcggtgtgttgcccaacatcaacccggttctgctgccc 469
Query: 459 aagaa 463
|||||
Sbjct: 470 aagaa 474
>gb|BF421738.1|BF421738 FM1_16_A07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 442
Score = 270 bits (136), Expect = 2e-070
Identities = 258/299 (86%)
Strand = Plus / Plus
Query: 165 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 224
|||||||| || |||||||| || ||||| ||||| || ||||||||| ||| || |||
Sbjct: 15 aaggccgggctgcagttccctgtcggccgcatcggtcggtacctcaagaaggnccggtac 74
Query: 225 tcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgcc 284
| ||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 75 gcgcagcgcgtgggcaccggcgcccccgtctacctcgccgccgtcctggagtacctcgcc 134
Query: 285 gccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatc 344
|| ||| | || ||| |||| |||||||| ||| ||||||||||||||| || ||||||
Sbjct: 135 gcagaggtgctggagctggctgggaacgcggcgagggacaacaagaagacgcgcatcatc 194
Query: 345 ccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggc 404
||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 195 ccgcgccacgtgctcctggccatccgcaacgacgaggagctcgggaagctgctggccggc 254
Query: 405 gtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaa 463
||||||||||| |||||||| || || |||||||||||||| ||||| || ||||||||
Sbjct: 255 gtcaccatcgcgcacggcggcgtcctccccaacatcaacccggtgctcctgcccaagaa 313
>gb|BG273378.1|BG273378 OV2_28_H11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 268 bits (135), Expect = 8e-070
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
|||||| |||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 27 gtgaagnccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 86
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 87 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 146
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 147 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 206
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 207 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 266
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 267 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 326
Query: 462 aa 463
||
Sbjct: 327 aa 328
>gb|BG240377.1|BG240377 OV1_29_C06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 469
Score = 266 bits (134), Expect = 3e-069
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 159 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 218
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 219 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtgctcgagtacctc 278
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 279 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 338
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 339 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 398
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 399 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 458
Query: 462 aa 463
||
Sbjct: 459 aa 460
>gb|BG412373.1|BG412373 OV2_33_B08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 629
Score = 266 bits (134), Expect = 3e-069
Identities = 260/302 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 54 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 113
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 114 tacgcgcagcgcgtcggcaccggcgctcccgtgtacctcgccgccgtcctcgagtacctc 173
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 174 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 233
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 234 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 293
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 294 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 353
Query: 462 aa 463
||
Sbjct: 354 aa 355
>gb|BG241106.1|BG241106 OV1_38_C05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 451
Score = 262 bits (132), Expect = 5e-068
Identities = 246/284 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 165 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 224
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 225 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 284
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 285 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 344
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 345 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 404
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccc 445
|| |||||||| || |||||||| || ||||||||||||||||
Sbjct: 405 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaaccc 448
>gb|BE125654.1|BE125654 DG1_54_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 465
Score = 258 bits (130), Expect = 8e-067
Identities = 262/306 (85%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 160 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 219
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 220 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 279
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 280 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 339
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 340 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 399
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
||||||||||||||||| |||||||| || || ||||||||| || |||||| || |||
Sbjct: 400 gccggcgtcaccatcgcccacggcggcgtcctccccaacatccacagtgtgctcctgccc 459
Query: 459 aagaaa 464
||||||
Sbjct: 460 aagaaa 465
>gb|BE362770.1|BE362770 DG1_89_D05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 471
Score = 258 bits (130), Expect = 8e-067
Identities = 262/306 (85%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 165 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 224
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 225 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 284
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 285 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 344
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 345 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 404
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
||||||||||||||||| |||||||| || || ||||||||| || |||||| || |||
Sbjct: 405 gccggcgtcaccatcgcccacggcggcgtcctccccaacatccacagtgtgctcctgccc 464
Query: 459 aagaaa 464
||||||
Sbjct: 465 aagaaa 470
>gb|BG239807.1|BG239807 OV1_29_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 258 bits (130), Expect = 8e-067
Identities = 259/302 (85%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 26 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 85
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 86 tacgcgcagcgcgtcggcaccggcgctcccgtgtacctcgccgccgtcctcgagtacctc 145
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
|||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 146 gccgatgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 205
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 206 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 265
Query: 402 ggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaag 461
|| |||||||| || |||||||| || |||||||||||||||| || ||||| ||||||
Sbjct: 266 ggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaag 325
Query: 462 aa 463
||
Sbjct: 326 aa 327
>gb|CW046386.1|CW046386 104_283_10510161_114_30137 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10510161, DNA
sequence
Length = 616
Score = 256 bits (129), Expect = 3e-066
Identities = 261/305 (85%)
Strand = Plus / Minus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 490 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 431
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 430 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 371
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 370 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 311
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 310 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 251
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
||||||||||||||||| |||||||| || || ||||||||| || |||||| || |||
Sbjct: 250 gccggcgtcaccatcgcccacggcggcgtcctccccaacatccacagtgtgctcctgccc 191
Query: 459 aagaa 463
|||||
Sbjct: 190 aagaa 186
>gb|BE359579.1|BE359579 DG1_54_E12.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 256 bits (129), Expect = 3e-066
Identities = 261/305 (85%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 25 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 84
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 85 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 144
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 145 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 204
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 205 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 264
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
||||||||||||||||| |||||||| || || ||||||||| || |||||| || |||
Sbjct: 265 gccggcgtcaccatcgcccacggcggcgtcctccccaacatccacagtgtgctcctgccc 324
Query: 459 aagaa 463
|||||
Sbjct: 325 aagaa 329
>gb|BE362832.1|BE362832 DG1_89_D05.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 691
Score = 256 bits (129), Expect = 3e-066
Identities = 261/305 (85%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 126 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 185
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 186 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 245
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 246 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 305
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 306 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 365
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctcccc 458
||||||||||||||||| |||||||| || || ||||||||| || |||||| || |||
Sbjct: 366 gccggcgtcaccatcgcccacggcggcgtcctccccaacatccacagtgtgctcctgccc 425
Query: 459 aagaa 463
|||||
Sbjct: 426 aagaa 430
>gb|BG240387.1|BG240387 OV1_29_D06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 459
Score = 256 bits (129), Expect = 3e-066
Identities = 259/301 (86%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 159 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 218
Query: 222 tactcc-cagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacct 280
||| | ||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 219 tacgacgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacct 278
Query: 281 cgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggat 340
|||||| ||| | || ||| | || |||||||| || ||||||||||||||| || ||
Sbjct: 279 cgccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcat 338
Query: 341 catcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggc 400
|||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| |
Sbjct: 339 catcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtc 398
Query: 401 cggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaa 460
||| |||||||| || |||||||| || |||||||||||||||| || ||||| |||||
Sbjct: 399 cggtgtcaccattgcccacggcggtgtgttgcccaacatcaacccggttctgctgcccaa 458
Query: 461 g 461
|
Sbjct: 459 g 459
>gb|CW060299.1|CW060299 104_303_10519777_1_30041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519777, DNA
sequence
Length = 638
Score = 254 bits (128), Expect = 1e-065
Identities = 275/324 (84%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 625 gaagaagtcggtgtcgcgttccgtcaaggccgggctgcagttccccgtcggccgtatcgg 566
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| ||||||||| |||| || ||| | ||||| |||||||| |||||||||||||||||
Sbjct: 565 gcggtacctcaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 506
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| ||||||||||||||||||||||||||| | || ||| | || || ||||| || |
Sbjct: 505 cgccgccgtcctcgagtacctcgccgccgaggtgctggagctcgccggcaacgcggccag 446
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 445 ggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatccgcaacgacga 386
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||| | |||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 385 ggagctcggcaagttgctggccggcgtcaccatcgcccacggcggcgtcctccccaacat 326
Query: 440 caaccctgtgctgctccccaagaa 463
|| ||||| |||||||||||
Sbjct: 325 tcacagcgtgcttctccccaagaa 302
>gb|CW060389.1|CW060389 104_303_10519825_1_30042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519825, DNA
sequence
Length = 634
Score = 254 bits (128), Expect = 1e-065
Identities = 275/324 (84%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 625 gaagaagtcggtgtcgcgttccgtcaaggccgggctgcagttccccgtcggccgtatcgg 566
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| ||||||||| |||| || ||| | ||||| |||||||| |||||||||||||||||
Sbjct: 565 gcggtacctcaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 506
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| ||||||||||||||||||||||||||| | || ||| | || || ||||| || |
Sbjct: 505 cgccgccgtcctcgagtacctcgccgccgaggtgctggagctcgccggcaacgcggccag 446
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 445 ggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatccgcaacgacga 386
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||| | |||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 385 ggagctcggcaagttgctggccggcgtcaccatcgcccacggcggcgtcctccccaacat 326
Query: 440 caaccctgtgctgctccccaagaa 463
|| ||||| |||||||||||
Sbjct: 325 tcacagcgtgcttctccccaagaa 302
>gb|CW418806.1|CW418806 fsbb001f123g10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f123g10, DNA
sequence
Length = 550
Score = 254 bits (128), Expect = 1e-065
Identities = 275/324 (84%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 168 gaagaagtcggtgtcgcgttccgtcaaggccgggctgcagttccccgtcggccgtatcgg 227
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| ||||||||| |||| || ||| | ||||| |||||||| |||||||||||||||||
Sbjct: 228 gcggtacctcaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 287
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| ||||||||||||||||||||||||||| | || ||| | || || ||||| || |
Sbjct: 288 cgccgccgtcctcgagtacctcgccgccgaggtgctggagctcgccggcaacgcggccag 347
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 348 ggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatccgcaacgacga 407
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||| | |||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 408 ggagctcggcaagttgctggccggcgtcaccatcgcccacggcggcgtcctccccaacat 467
Query: 440 caaccctgtgctgctccccaagaa 463
|| ||||| |||||||||||
Sbjct: 468 tcacagcgtgcttctccccaagaa 491
>gb|CW460985.1|CW460985 fsbb001f208h03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208h03, DNA
sequence
Length = 648
Score = 254 bits (128), Expect = 1e-065
Identities = 275/324 (84%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 442 gaagaagtcggtgtcgcgttccgtcaaggccgggctgcagttccccgtcggccgtatcgg 383
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| ||||||||| |||| || ||| | ||||| |||||||| |||||||||||||||||
Sbjct: 382 gcggtacctcaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacct 323
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| ||||||||||||||||||||||||||| | || ||| | || || ||||| || |
Sbjct: 322 cgccgccgtcctcgagtacctcgccgccgaggtgctggagctcgccggcaacgcggccag 263
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 262 ggacaacaagaagacgcgcatcatcccgcgccacgtgctcctggccatccgcaacgacga 203
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||| | |||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 202 ggagctcggcaagttgctggccggcgtcaccatcgcccacggcggcgtcctccccaacat 143
Query: 440 caaccctgtgctgctccccaagaa 463
|| ||||| |||||||||||
Sbjct: 142 tcacagcgtgcttctccccaagaa 119
>gb|AW681166.1|AW681166 WS1_9_E11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 250 bits (126), Expect = 2e-064
Identities = 239/272 (87%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 587 ctctgtcctctctgaactgaaacgctcctagctgtcgttgtcggtcatggtcgttgttgt 646
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 ctctgtccgctctgaactgaaacgctcctagctgtcgttgtcggtcaaggtcgttgttgc 177
Query: 647 ttgatgcgcttttattgtggttgttcgtgtgtaattgcttgcctttcgcccatttggcat 706
||||| || ||| |||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 178 ttgat--gcatttgttgtggttgttcgtgtgtaattgcgcgcctttcgcccaatccgcat 235
Query: 707 gcactgtgtagggtcacactggtctaggttttcaatctgggaaacaccggtttagattca 766
| |||||||||| | |||||||| |||| |||| ||||| ||||| | ||||||||||||
Sbjct: 236 gtactgtgtaggttgacactggtttagg-tttcgatctgtgaaacgctggtttagattca 294
Query: 767 agga--gcgtgaactgtgaa-ggcaggtgagagggtgggatctgtgaatcactaggtgct 823
|||| | |||| ||||||| |||||| || ||||||||||||||||||| ||| ||||
Sbjct: 295 aggagtgtgtgagctgtgaagggcaggggatggggtgggatctgtgaatcattagatgct 354
Query: 824 gtttgtaataagattgcaaagatgtgtaaaat 855
||||||||||| ||||| ||||||||||||||
Sbjct: 355 gtttgtaataatattgcgaagatgtgtaaaat 386
Score = 75.8 bits (38), Expect = 6e-012
Identities = 58/64 (90%), Gaps = 3/64 (4%)
Strand = Plus / Plus
Query: 480 gccaaggaaggcaaagagaagaagtcacccaagaaggccgccgccgccaagtcgcccaaa 539
|||||||| ||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 3 gccaaggagggcaaagagaagaagtcacccaagaaggccgccacc---aagtcgcccaag 59
Query: 540 aagg 543
||||
Sbjct: 60 aagg 63
>gb|BF317912.1|BF317912 OV1_9_C08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 456
Score = 250 bits (126), Expect = 2e-064
Identities = 243/282 (86%)
Strand = Plus / Plus
Query: 159 tccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggt 218
||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 168 tccgtcaaggccgggctgcagttccccgtcggccgcatcgggcggtacctgaagaagggg 227
Query: 219 cgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtac 278
|| ||| | ||||| || ||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 228 cggtacgcgcagcgcgtgggcacgggcgccccggtctacctcgccgccgtcctcgagtac 287
Query: 279 ctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccgg 338
|||||||||||| | || ||| |||| |||||||| || ||||||||||||||| |||
Sbjct: 288 ctcgccgccgaggtgctggagctggccgggaacgcggccagggacaacaagaagacccgc 347
Query: 339 atcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactg 398
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 348 atcatcccgcgccacgtgctcctggccatccgcaacgacgaggagctcggcaagctgctg 407
Query: 399 gccggcgtcaccatcgcacacggcggggttctgcccaacatc 440
||||||||||||||||| |||||||| || || |||||||||
Sbjct: 408 gccggcgtcaccatcgcccacggcggcgtgctccccaacatc 449
>gb|BF421188.1|BF421188 FM1_6_E07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 426
Score = 250 bits (126), Expect = 2e-064
Identities = 228/262 (87%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 165 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 224
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 225 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 284
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 285 gccgctgaggttctggagctcgccgggaacgctgccagggacaacaagaagacgcgcatc 344
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 345 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 404
Query: 402 ggcgtcaccatcgcacacggcg 423
|| ||||||||||| |||||||
Sbjct: 405 ggtgtcaccatcgcccacggcg 426
>gb|BG240788.1|BG240788 OV1_38_C05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 482
Score = 250 bits (126), Expect = 2e-064
Identities = 246/286 (86%)
Strand = Plus / Plus
Query: 178 agttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcg 237
|||||||||| ||||| ||||| |||||||| ||| |||| |||||| | ||||| ||||
Sbjct: 1 agttccccgtcggccgcatcgggcgctacctgaagaagggccgctacgcgcagcgcgtcg 60
Query: 238 gcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcg 297
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||| | || |
Sbjct: 61 gcaccggcgctcccgtctacctcgccgccgtcctcgagtacctcgccgctgaggttctgg 120
Query: 298 agttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtac 357
|| | || |||||||| || ||||||||||||||| || |||||||| || ||||| |
Sbjct: 121 agctcgccgggaacgccgccagggacaacaagaagacgcgcatcatcccccgccacgtgc 180
Query: 358 tgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcac 417
|||| |||||||||||||| ||||||||||||||||| ||| |||| |||||||| || |
Sbjct: 181 tgctcgcgatccgcaacgacgaggagctcgggaagctgctgtccggtgtcaccattgccc 240
Query: 418 acggcggggttctgcccaacatcaaccctgtgctgctccccaagaa 463
||||||| || |||||||||||||||| || ||||| ||||||||
Sbjct: 241 acggcggtgtgttgcccaacatcaacccggttctgctgcccaagaa 286
>gb|AW287442.2|AW287442 LG1_228_A03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 236 bits (119), Expect = 3e-060
Identities = 227/263 (86%)
Strand = Plus / Plus
Query: 138 aagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatc 197
|||||||||||||| || || ||||| |||||||| || |||||||| || ||||| |||
Sbjct: 144 aagaagaagccggtgtcgcggtccgtcaaggccgggctgcagttcccggtgggccgcatc 203
Query: 198 ggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctac 257
|| || ||||| ||| ||||||| ||| | ||||| || ||||| ||||| |||||||||
Sbjct: 204 gggcggtacctgaagaagggtcggtacgcgcagcgcgtgggcacgggcgcgcccgtctac 263
Query: 258 ctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcg 317
||||| ||||||||||||||||||||||||||| |||| ||| ||||||| ||||| |||
Sbjct: 264 ctcgccgccgtcctcgagtacctcgccgccgaggtccttgagctggcgggcaacgcggcg 323
Query: 318 cgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgat 377
|| ||||||||||||||||| ||||||||||| ||||| || || || |||||||||||
Sbjct: 324 cgcgacaacaagaagaaccgcatcatcccgcgccacgtcctcctcgccatccgcaacgac 383
Query: 378 gaggagctcgggaagctactggc 400
||||||||||| ||||| |||||
Sbjct: 384 gaggagctcggcaagctgctggc 406
>gb|AW287488.2|AW287488 LG1_228_F02.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 410
Score = 236 bits (119), Expect = 3e-060
Identities = 227/263 (86%)
Strand = Plus / Plus
Query: 138 aagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatc 197
|||||||||||||| || || ||||| |||||||| || |||||||| || ||||| |||
Sbjct: 144 aagaagaagccggtgtcgcggtccgtcaaggccgggctgcagttcccggtgggccgcatc 203
Query: 198 ggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctac 257
|| || ||||| ||| ||||||| ||| | ||||| || ||||| ||||| |||||||||
Sbjct: 204 gggcggtacctgaagaagggtcggtacgcgcagcgcgtgggcacgggcgcgcccgtctac 263
Query: 258 ctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcg 317
||||| ||||||||||||||||||||||||||| |||| ||| ||||||| ||||| |||
Sbjct: 264 ctcgccgccgtcctcgagtacctcgccgccgaggtccttgagctggcgggcaacgcggcg 323
Query: 318 cgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgat 377
|| ||||||||||||||||| ||||||||||| ||||| || || || |||||||||||
Sbjct: 324 cgcgacaacaagaagaaccgcatcatcccgcgccacgtcctcctcgccatccgcaacgac 383
Query: 378 gaggagctcgggaagctactggc 400
||||||||||| ||||| |||||
Sbjct: 384 gaggagctcggcaagctgctggc 406
>gb|AW564126.1|AW564126 LG1_282_E07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 431
Score = 236 bits (119), Expect = 3e-060
Identities = 218/251 (86%)
Strand = Plus / Plus
Query: 162 gtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgc 221
||||||||||| |||||||||||||| ||||| ||||| |||||||| ||| |||| |||
Sbjct: 173 gtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctgaagaagggccgc 232
Query: 222 tactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctc 281
||| | ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 233 tacgcgcagcgcgtcggcaccggcgctcccgtctacctcgccgccgtcctcgagtacctc 292
Query: 282 gccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatc 341
||||| ||| | || ||| | || |||||||| || ||||||||||||||| || |||
Sbjct: 293 gccgctgaggttctggagctcgccgggaacgccgccagggacaacaagaagacgcgcatc 352
Query: 342 atcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggcc 401
||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 353 atcccccgccacgtgctgctcgcgatccgcaacgacgaggagctcgggaagctgctgtcc 412
Query: 402 ggcgtcaccat 412
|| ||||||||
Sbjct: 413 ggtgtcaccat 423
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 357,069
Number of Sequences: 832831
Number of extensions: 357069
Number of successful extensions: 133359
Number of sequences better than 0.5: 157
Number of HSP's better than 0.5 without gapping: 156
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 132707
Number of HSP's gapped (non-prelim): 568
length of query: 887
length of database: 491,359,669
effective HSP length: 20
effective length of query: 867
effective length of database: 474,703,049
effective search space: 411567543483
effective search space used: 411567543483
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)