BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.1
(892 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN149106.1|CN149106 WOUND1_60_F07.g1_A002 Wounded leaves... 912 0.0
gb|CN129625.1|CN129625 RHOH1_36_A11.g1_A002 Acid- and alkal... 858 0.0
gb|CN148636.1|CN148636 WOUND1_57_G10.g1_A002 Wounded leaves... 837 0.0
gb|CF430327.1|CF430327 PH1_27_B12.g1_A002 Phosphorous-defic... 787 0.0
gb|CN142104.1|CN142104 WOUND1_3_H04.g1_A002 Wounded leaves ... 779 0.0
gb|CX613679.1|CX613679 GABR1_9_C08.g1_A002 GA- or brassinol... 737 0.0
gb|CN137957.1|CN137957 OX1_60_G12.g1_A002 Oxidatively-stres... 724 0.0
gb|CX617402.1|CX617402 GABR1_33_C02.g1_A002 GA- or brassino... 680 0.0
gb|CN131232.1|CN131232 RHOH1_46_E06.g1_A002 Acid- and alkal... 678 0.0
gb|CD226105.1|CD226105 CCC1_43_G05.g1_A007 Callus culture/c... 567 e-160
gb|CD220667.1|CD220667 CCC1_68_F10.g1_A007 Callus culture/c... 561 e-158
gb|CX613188.1|CX613188 GABR1_6_F07.g1_A002 GA- or brassinol... 559 e-157
gb|CD234026.1|CD234026 SS1_5_G11.g1_A012 Salt-stressed seed... 553 e-156
gb|CD226008.1|CD226008 CCC1_42_A11.g1_A007 Callus culture/c... 547 e-154
gb|AW923031.1|AW923031 DG1_48_C02.g1_A002 Dark Grown 1 (DG1... 541 e-152
gb|CD235912.1|CD235912 SS1_24_H02.g1_A012 Salt-stressed see... 529 e-148
gb|CD463446.1|CD463446 ETH1_44_D10.g1_A002 Ethylene-treated... 529 e-148
gb|CN141779.1|CN141779 WOUND1_1_F11.g1_A002 Wounded leaves ... 513 e-144
gb|BM324713.1|BM324713 PIC1_34_F09.b1_A002 Pathogen-infecte... 492 e-137
gb|CN131146.1|CN131146 RHOH1_46_E06.b1_A002 Acid- and alkal... 476 e-132
gb|CD462440.1|CD462440 ETH1_37_B04.g1_A002 Ethylene-treated... 454 e-126
gb|CD213845.1|CD213845 HS1_53_C04.g1_A012 Heat-shocked seed... 440 e-121
gb|CD429669.1|CD429669 ETH1_14_A06.g1_A002 Ethylene-treated... 432 e-119
gb|CN129539.1|CN129539 RHOH1_36_A11.b3_A002 Acid- and alkal... 428 e-118
gb|CX617322.1|CX617322 GABR1_33_C02.b1_A002 GA- or brassino... 428 e-118
gb|CN151516.1|CN151516 WOUND1_75_H12.g1_A002 Wounded leaves... 422 e-116
gb|CX613100.1|CX613100 GABR1_6_F07.b1_A002 GA- or brassinol... 422 e-116
gb|CN151429.1|CN151429 WOUND1_75_H12.b1_A002 Wounded leaves... 418 e-115
gb|CN137887.1|CN137887 OX1_60_G12.b1_A002 Oxidatively-stres... 414 e-114
gb|CN150766.1|CN150766 WOUND1_71_G06.b1_A002 Wounded leaves... 414 e-114
gb|CN150427.1|CN150427 WOUND1_69_C11.b1_A002 Wounded leaves... 400 e-110
gb|CN148554.1|CN148554 WOUND1_57_G10.b1_A002 Wounded leaves... 389 e-106
gb|CD463397.1|CD463397 ETH1_44_D10.b1_A002 Ethylene-treated... 383 e-104
gb|BG102937.1|BG102937 RHIZ2_35_B10.b1_A003 Rhizome2 (RHIZ2... 377 e-102
gb|CW477551.1|CW477551 fsbb001f234o22k0 Sorghum methylation... 335 4e-090
gb|CD428654.1|CD428654 ETH1_33_H04.g1_A002 Ethylene-treated... 331 6e-089
gb|BG241943.1|BG241943 RHIZ2_17_E12.b2_A003 Rhizome2 (RHIZ2... 325 4e-087
gb|BE363909.1|BE363909 PI1_10_F01.b1_A002 Pathogen induced ... 321 6e-086
gb|CF430274.1|CF430274 PH1_27_B12.b1_A002 Phosphorous-defic... 315 4e-084
gb|BF588044.1|BF588044 FM1_37_A08.b1_A003 Floral-Induced Me... 307 9e-082
gb|BE357096.1|BE357096 DG1_146_E08.g1_A002 Dark Grown 1 (DG... 303 1e-080
gb|CD232477.1|CD232477 SS1_45_H01.g1_A012 Salt-stressed see... 297 9e-079
gb|CL187620.1|CL187620 104_403_10901014_116_32464_089 Sorgh... 258 8e-067
gb|CW055478.1|CW055478 104_296_10517125_114_30174 Sorghum m... 258 8e-067
gb|CD429643.1|CD429643 ETH1_14_A05.g1_A002 Ethylene-treated... 258 8e-067
gb|CD432779.1|CD432779 ETH1_33_H04.b1_A002 Ethylene-treated... 248 8e-064
gb|BG241601.1|BG241601 RHIZ2_17_E12.g1_A003 Rhizome2 (RHIZ2... 240 2e-061
gb|CN142021.1|CN142021 WOUND1_3_H04.b1_A002 Wounded leaves ... 238 7e-061
gb|BI075324.1|BI075324 IP1_19_B08.b1_A002 Immature pannicle... 232 4e-059
gb|AW922986.1|AW922986 DG1_48_C02.b1_A002 Dark Grown 1 (DG1... 228 7e-058
gb|CD233929.1|CD233929 SS1_5_G11.b1_A012 Salt-stressed seed... 218 7e-055
gb|BG102615.1|BG102615 RHIZ2_35_B10.g1_A003 Rhizome2 (RHIZ2... 216 3e-054
gb|BE598537.1|BE598537 PI1_83_C11.g1_A002 Pathogen induced ... 206 3e-051
gb|BE593813.1|BE593813 WS1_102_F04.g1_A002 Water-stressed 1... 200 2e-049
gb|BG465488.1|BG465488 RHIZ2_45_C01.b1_A003 Rhizome2 (RHIZ2... 200 2e-049
gb|CD429535.1|CD429535 ETH1_14_A06.b1_A002 Ethylene-treated... 196 2e-048
gb|CW033867.1|CW033867 104_263_10502201_114_30359 Sorghum m... 163 3e-038
gb|CW215166.1|CW215166 104_647_11194398_148_37463_025 Sorgh... 163 3e-038
gb|CW398846.1|CW398846 fsbb001f088h10k0 Sorghum methylation... 163 3e-038
gb|BE357017.1|BE357017 DG1_146_E08.b1_A002 Dark Grown 1 (DG... 163 3e-038
gb|BG273414.1|BG273414 OV2_25_D08.b1_A002 Ovary 2 (OV2) Sor... 163 3e-038
gb|BG558396.1|BG558396 RHIZ2_66_H04.b1_A003 Rhizome2 (RHIZ2... 163 3e-038
gb|CF431193.1|CF431193 NIT1_6_C12.g1_A002 Nitrogen-deficien... 163 3e-038
gb|CN150500.1|CN150500 WOUND1_69_C11.g1_A002 Wounded leaves... 163 3e-038
gb|AI723942.1|AI723942 RHIZ1_36_A11.y1_A001 Rhizome1 (RHIZ1... 161 1e-037
gb|BF587487.1|BF587487 FM1_37_A08.g1_A003 Floral-Induced Me... 161 1e-037
gb|BG158700.1|BG158700 RHIZ2_44_B03.g1_A003 Rhizome2 (RHIZ2... 161 1e-037
gb|CD213751.1|CD213751 HS1_53_C04.b1_A012 Heat-shocked seed... 161 1e-037
gb|CD225900.1|CD225900 CCC1_42_A11.b1_A007 Callus culture/c... 161 1e-037
gb|CD226023.1|CD226023 CCC1_43_G05.b1_A007 Callus culture/c... 161 1e-037
gb|CD232377.1|CD232377 SS1_45_H01.b1_A012 Salt-stressed see... 161 1e-037
gb|BE594128.1|BE594128 WS1_102_F04.b1_A002 Water-stressed 1... 155 8e-036
gb|CW055479.1|CW055479 104_296_10517125_115_30175 Sorghum m... 153 3e-035
gb|CW196923.1|CW196923 104_621_11181420_148_36819_046 Sorgh... 153 3e-035
gb|CW308396.1|CW308396 104_796_11468645_116_35730_017 Sorgh... 153 3e-035
gb|CW308397.1|CW308397 104_796_11468645_148_35738_017 Sorgh... 153 3e-035
gb|BE363987.1|BE363987 PI1_10_F01.g1_A002 Pathogen induced ... 153 3e-035
gb|BG273294.1|BG273294 OV2_25_D08.g1_A002 Ovary 2 (OV2) Sor... 153 3e-035
gb|BG465840.1|BG465840 RHIZ2_45_C01.g1_A003 Rhizome2 (RHIZ2... 153 3e-035
gb|BM329200.1|BM329200 PIC1_34_F09.g1_A002 Pathogen-infecte... 153 3e-035
gb|CD429589.1|CD429589 ETH1_14_A05.b1_A002 Ethylene-treated... 153 3e-035
gb|CD462399.1|CD462399 ETH1_37_B04.b1_A002 Ethylene-treated... 153 3e-035
gb|CF429758.1|CF429758 PH1_24_G12.b1_A002 Phosphorous-defic... 153 3e-035
gb|CF431110.1|CF431110 NIT1_6_C12.b1_A002 Nitrogen-deficien... 153 3e-035
gb|CN141697.1|CN141697 WOUND1_1_F11.b1_A002 Wounded leaves ... 153 3e-035
gb|CX613596.1|CX613596 GABR1_9_C08.b1_A002 GA- or brassinol... 153 3e-035
gb|CX623160.1|CX623160 GABR1_68_C07.b1_A002 GA- or brassino... 153 3e-035
gb|CX623250.1|CX623250 GABR1_68_C07.g1_A002 GA- or brassino... 147 2e-033
gb|CN149020.1|CN149020 WOUND1_60_F07.b1_A002 Wounded leaves... 145 8e-033
gb|CW481168.1|CW481168 fsbb001f240j14f0 Sorghum methylation... 133 3e-029
gb|BI075165.1|BI075165 IP1_19_B08.g1_A002 Immature pannicle... 131 1e-028
gb|CW215165.1|CW215165 104_647_11194398_116_37464_025 Sorgh... 129 5e-028
gb|CW413851.1|CW413851 fsbb001f113d12k0 Sorghum methylation... 123 3e-026
gb|CN150848.1|CN150848 WOUND1_71_G06.g1_A002 Wounded leaves... 107 2e-021
gb|BG241652.1|BG241652 RHIZ2_49_C01.b1_A003 Rhizome2 (RHIZ2... 100 4e-019
gb|CW033868.1|CW033868 104_263_10502201_115_30360 Sorghum m... 90 4e-016
gb|AI724106.1|AI724106 RHIZ1_6_A11.y2_A001 Rhizome1 (RHIZ1)... 86 6e-015
gb|CL189662.1|CL189662 104_407_10905528_116_32480_094 Sorgh... 42 0.086
gb|CW254995.1|CW254995 104_719_11225983_148_35128_026 Sorgh... 42 0.086
gb|AI724645.1|AI724645 RHIZ1_11_B12.y2_A001 Rhizome1 (RHIZ1... 42 0.086
gb|AW922618.1|AW922618 DG1_46_C02.b1_A002 Dark Grown 1 (DG1... 42 0.086
gb|BG241440.1|BG241440 RHIZ2_49_C01.g1_A003 Rhizome2 (RHIZ2... 42 0.086
gb|CD427401.1|CD427401 SA1_30_H03.b1_A002 Salicylic acid-tr... 42 0.086
gb|CD427426.1|CD427426 SA1_30_H03.g1_A002 Salicylic acid-tr... 42 0.086
gb|CF071776.1|CF071776 FE1_18_E12.g1_A002 Iron-deficient se... 42 0.086
gb|CF480373.1|CF480373 POL1_65_H09.b1_A002 Pollen Sorghum b... 42 0.086
gb|CF480460.1|CF480460 POL1_65_H09.g1_A002 Pollen Sorghum b... 42 0.086
gb|CF481134.1|CF481134 POL1_70_E04.b1_A002 Pollen Sorghum b... 42 0.086
gb|CF481222.1|CF481222 POL1_70_E04.g1_A002 Pollen Sorghum b... 42 0.086
gb|CF486896.1|CF486896 POL1_40_B05.g1_A002 Pollen Sorghum b... 42 0.086
gb|CL182273.1|CL182273 104_393_10897318_116_31922_310 Sorgh... 40 0.34
gb|CW100859.1|CW100859 104_468_11004330_116_34399_073 Sorgh... 40 0.34
gb|CW101455.1|CW101455 104_469_11004656_116_34407_028 Sorgh... 40 0.34
gb|CW153760.1|CW153760 104_555_11145221_116_36339_021 Sorgh... 40 0.34
>gb|CN149106.1|CN149106 WOUND1_60_F07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_60_F07_A002 5', mRNA sequence
Length = 903
Score = 912 bits (460), Expect = 0.0
Identities = 597/642 (92%), Gaps = 3/642 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 229 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 288
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 289 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 348
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 349 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 408
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 409 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 468
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 469 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 528
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 529 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 588
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 589 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcatcccat 648
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 649 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 708
Query: 604 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaac 663
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 709 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgac 768
Query: 664 ctgcttgcaggcactctccagaaggatccactatgggaagtttgtggcagaggccaagtt 723
|||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 769 ctgcttgcaggcactctctaaaaggatccactatgggatgtttgtggcagaggccaagtt 828
Query: 724 tcaagagtcccctgaagcttacacgccagccataatagccca 765
||| ||| |||||||| |||||| ||||||||||||||||||
Sbjct: 829 tcaggaggcccctgaatcttacatgccagccataatagccca 870
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 42 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 101
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 102 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 161
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 162 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 219
>gb|CN129625.1|CN129625 RHOH1_36_A11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_A11_A002 5', mRNA sequence
Length = 709
Score = 858 bits (433), Expect = 0.0
Identities = 602/657 (91%), Gaps = 6/657 (0%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcggcg---tcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 52 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 111
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 112 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgttgccttcg 171
Query: 168 gaccagc---gcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccatag 224
||||||| | |||||| | | ||||| ||||||||||||||||||| |||||||| |
Sbjct: 172 gaccagcagcgtccaggacccacgggctacgcgcggccaacaactccgtcacgcccatgg 231
Query: 225 ctaaggtagagagggttgatcgaagtgacatattgacattggatagcatcagacaagttt 284
| |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 232 ccaaggaagagagggttgatcgaagtgaaacattgacattggatagcattagacaagttt 291
Query: 285 tgattagactagaagacagcatcatatttggccttttggagagagcacagttttgttaca 344
|||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 292 tgattagacttgaagacagcatcatattcggcctcttggagagagcccagttttgttaca 351
Query: 345 atgctgatacatatgatagcaatgctttccacatggatggttttggaggatctttggttg 404
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 352 atgctgagacatatgatagcaatgctttccacatggatggttttgaaggatctttggttg 411
Query: 405 aatatatagttagagaaactgaaaagctccatgcacaggttgggagatacaagagcccag 464
||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 412 aatatatggtcagagaaactgaaaagctccatgcacaggttgggagatacaatagcccag 471
Query: 465 atgagcaccctttcttttccaaggatctgcctgagccccggttgccacctatgcaatacc 524
||||| ||||||||||| | ||||||||||||||||||| ||||||||||| |||||||
Sbjct: 472 atgagtaccctttctttcctgaggatctgcctgagccccgcttgccacctatacaatacc 531
Query: 525 caagggttttgcatcccattgctgattctatcaatatcaacaaagagatttggaaaatgt 584
||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 532 caatggtgttgcatcccattgctgattcgataaatatcaacaaagagatttggaaaatgt 591
Query: 585 attttgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatcca 644
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atttccatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatcca 651
Query: 645 gtgctctttgtgacacaacctgcttgcaggcactctccagaaggatccactatggga 701
||||| |||||||||| ||||||||||| |||||||| | |||||||||||||||||
Sbjct: 652 gtgctgtttgtgacacgacctgcttgcacgcactctctaaaaggatccactatggga 708
>gb|CN148636.1|CN148636 WOUND1_57_G10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_57_G10_A002 5', mRNA sequence
Length = 812
Score = 837 bits (422), Expect = 0.0
Identities = 547/588 (93%), Gaps = 3/588 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 225 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 284
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 285 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 344
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 345 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 404
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 405 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 464
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 465 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 524
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 525 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 584
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 585 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcatcccat 644
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 645 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 704
Query: 604 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaac 663
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 705 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgac 764
Query: 664 ctgcttgcaggcactctccagaaggatccactatgggaagtttgtggc 711
|||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 765 ctgcttgcaggcactctctaaaaggatccactatgggatgtttgtggc 812
Score = 119 bits (60), Expect = 5e-025
Identities = 142/168 (84%), Gaps = 6/168 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 38 ggtggttggtggcgatggccttcaagctgggcaccatggccgcggcggcagcgtcgcccg 97
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| ||||| | | | ||||
Sbjct: 98 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagcttcttcggcttcc 157
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccg 212
||| ||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 158 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccg 205
>gb|CF430327.1|CF430327 PH1_27_B12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_B12_A002 5', mRNA sequence
Length = 689
Score = 787 bits (397), Expect = 0.0
Identities = 522/563 (92%), Gaps = 3/563 (0%)
Strand = Plus / Plus
Query: 137 gggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaacaaggggctc 193
|||||| |||| ||||||||||||||||||||||||| | ||||| | |||||||
Sbjct: 127 gggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggtcccaggggcta 186
Query: 194 cgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttgatcgaagtgac 253
||||||||||||||||||| |||||||| || |||| |||||||||||||||||||||
Sbjct: 187 cgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttgatcgaagtgaa 246
Query: 254 atattgacattggatagcatcagacaagttttgattagactagaagacagcatcatattt 313
| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 247 acattgacactggatagcattagacaagttttgattagacttgaagacagcatcatattc 306
Query: 314 ggccttttggagagagcacagttttgttacaatgctgatacatatgatagcaatgctttc 373
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 307 ggcctcttggagagagcccagttttgttacaatgctgagacatatgatagcaatgctttc 366
Query: 374 cacatggatggttttggaggatctttggttgaatatatagttagagaaactgaaaagctc 433
|||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 367 cacatggatggttttgaaggatctttggttgaatatatggtcagagaaactgaaaagctc 426
Query: 434 catgcacaggttgggagatacaagagcccagatgagcaccctttcttttccaaggatctg 493
||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||
Sbjct: 427 catgcacaggttgggagatacaatagcccagatgagtaccctttctttcctgaggatctg 486
Query: 494 cctgagccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattct 553
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 487 cctgagccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattct 546
Query: 554 atcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtg 613
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 547 ataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttccaagattggtg 606
Query: 614 aaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcag 673
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 607 aaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcag 666
Query: 674 gcactctccagaaggatccacta 696
|||||||| | ||||||||||||
Sbjct: 667 gcactctctaaaaggatccacta 689
Score = 67.9 bits (34), Expect = 2e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggc 96
|||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 69 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggc 114
>gb|CN142104.1|CN142104 WOUND1_3_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_H04_A002 5', mRNA sequence
Length = 803
Score = 779 bits (393), Expect = 0.0
Identities = 512/551 (92%), Gaps = 3/551 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 253 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 312
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 313 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 372
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 373 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 432
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 433 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 492
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 493 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 552
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 553 tgaaaagctccatgcacaggttgggagatacagtagcccagatgagtaccctttctttcc 612
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 613 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcatcccat 672
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 673 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 732
Query: 604 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaac 663
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 733 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgac 792
Query: 664 ctgcttgcagg 674
|||||||||||
Sbjct: 793 ctgcttgcagg 803
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 66 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 125
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 126 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 185
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 186 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 243
>gb|CX613679.1|CX613679 GABR1_9_C08.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_C08_A002 5', mRNA sequence
Length = 756
Score = 737 bits (372), Expect = 0.0
Identities = 488/526 (92%), Gaps = 3/526 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggacca---gcgcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 229 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccatcagcgtccaggac 288
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 289 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 348
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 349 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 408
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 409 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 468
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 469 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 528
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 529 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 588
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 589 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcgtcccat 648
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 649 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacatcttcc 708
Query: 604 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgct 649
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aagattggtgaaagaaggaagtgatggtaatgctggatccagtgct 754
Score = 147 bits (74), Expect = 2e-033
Identities = 153/178 (85%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| ||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 42 ggtggttggtggcgatggccttcaagccgggcaccaaggccgcggcggcggcgtcgcccg 101
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | ||||
Sbjct: 102 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttca 161
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 162 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 219
>gb|CN137957.1|CN137957 OX1_60_G12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_G12_A002 5', mRNA sequence
Length = 746
Score = 724 bits (365), Expect = 0.0
Identities = 481/519 (92%), Gaps = 3/519 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 228 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 287
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 288 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 347
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 348 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 407
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 408 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 467
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 468 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 527
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 528 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 587
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 588 tgaggatctgcctgagccccgcttgccacctatataatacccaagggttttgcatcccat 647
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 648 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 707
Query: 604 aagattggtgaaagaaggaagtgatggtaatgctggatc 642
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 708 aagattggtgaaagaagggagtgatggtaatgctggatc 746
Score = 155 bits (78), Expect = 8e-036
Identities = 154/178 (86%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcgg---cggcgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 41 ggtggttggtggcgatggccttcaagctgggcaccatggccgcggcggcggcgtcgcccg 100
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 101 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 160
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 161 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 218
>gb|CX617402.1|CX617402 GABR1_33_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_C02_A002 5', mRNA sequence
Length = 733
Score = 680 bits (343), Expect = 0.0
Identities = 456/493 (92%), Gaps = 3/493 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 241 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 300
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 301 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 360
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 361 tcgaagtgaagcattgacattggatagcattagacaagttttgattagacttgaagacag 420
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 421 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 480
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 481 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 540
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 541 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 600
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcatcccat 660
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 720
Query: 604 aagattggtgaaa 616
|||||||||||||
Sbjct: 721 aagattggtgaaa 733
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 54 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 113
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 114 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 173
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 174 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 231
>gb|CN131232.1|CN131232 RHOH1_46_E06.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_E06_A002 5', mRNA sequence
Length = 731
Score = 678 bits (342), Expect = 0.0
Identities = 455/492 (92%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggacca---gcgcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 240 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccaccagcgtccaggac 299
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 300 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 359
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 360 tcgaagtgaaacattgacattggatagcattagacaagttttgattaggcttgaagacag 419
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 420 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 479
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 480 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 539
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 540 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 599
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 600 tgaggatctgcctgagccccgcttgccacctatacaatacccaagggttttgcatcccat 659
Query: 544 tgctgattctatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttcc 603
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 660 tgctgattctataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttcc 719
Query: 604 aagattggtgaa 615
||||||||||||
Sbjct: 720 aagattggtgaa 731
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcgg---cggcgtcgcccg 107
|||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 53 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 112
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 113 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 172
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 173 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 230
>gb|CD226105.1|CD226105 CCC1_43_G05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_43_G05_A007 5', mRNA sequence
Length = 668
Score = 567 bits (286), Expect = e-160
Identities = 386/419 (92%), Gaps = 3/419 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 550 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 609
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatccca 542
||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 610 tgaggatctgcctgagccccgcttgccacctatacnatacccaagggttttgcatccca 668
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|CD220667.1|CD220667 CCC1_68_F10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_68_F10_A007 5', mRNA sequence
Length = 665
Score = 561 bits (283), Expect = e-158
Identities = 383/416 (92%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 550 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 609
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatc 539
||||||||||||||||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 610 tgaggatctgcctgagccccgcttgccacctatacnatacccaagggttttgcatc 665
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|CX613188.1|CX613188 GABR1_6_F07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_F07_A002 5', mRNA sequence
Length = 673
Score = 559 bits (282), Expect = e-157
Identities = 395/432 (91%), Gaps = 3/432 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||| ||||||| | ||||||
Sbjct: 241 tctcgcccgcgggccgcagggcgcgagccgcgttgccttctgaccagcatcgtccaggac 300
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 301 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 360
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 361 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 420
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 421 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 480
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 481 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 540
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
|||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 541 tgaagagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 600
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcccat 543
||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct: 601 tgaggatctgcctgagccccgcttgccacctatacgatacccaagggttttgcatcccat 660
Query: 544 tgctgattctat 555
||||||||||||
Sbjct: 661 tgctgattctat 672
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 54 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 113
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 114 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 173
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 174 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 231
>gb|CD234026.1|CD234026 SS1_5_G11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_5_G11_A012 5', mRNA sequence
Length = 661
Score = 553 bits (279), Expect = e-156
Identities = 379/412 (91%), Gaps = 3/412 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 550 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 609
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttg 535
||||||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 610 tgaggatctgcctgagccccgcttgccacctatacnatacccaagggttttg 661
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|CD226008.1|CD226008 CCC1_42_A11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_A11_A007 5', mRNA sequence
Length = 662
Score = 547 bits (276), Expect = e-154
Identities = 379/413 (91%), Gaps = 3/413 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| || |||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgggccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 550 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 609
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgc 536
||||||||||||||||||| ||||||||||| | |||||||||||||||||
Sbjct: 610 tgaggatctgcctgagccccgcttgccacctatacnatacccaagggttttgc 662
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggc---ggcgtcgcccgctgctgctcacc 119
|||||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcagcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|AW923031.1|AW923031 DG1_48_C02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 750
Score = 541 bits (273), Expect = e-152
Identities = 347/369 (94%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 398 ttggttgaatatatagttagagaaactgaaaagctcc-atgcacaggttgggagatacaa 456
|||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 ttggttgaatatatggtcagagaaactgaaa-gctcccatgcacaggttgggagatacaa 59
Query: 457 gagcccagatgagcaccctttcttttccaaggatctgcctgagccccggttgccacctat 516
|||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 60 tagcccagatgagtaccctttctttcctgaggatctgcctgagccccgcttgccacctat 119
Query: 517 gcaatacccaagggttttgcatcccattgctgattctatcaatatcaacaaagagatttg 576
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 120 acaatacccaagggttttgcatcccattgctgattctataaatatcaacaaagagatttg 179
Query: 577 gaaaatgtattttgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgc 636
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaaaatgtatttcgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgc 239
Query: 637 tggatccagtgctctttgtgacacaacctgcttgcaggcactctccagaaggatccacta 696
||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 240 tggatccagtgctgtttgtgacacgacctgcttgcaggcactctctaaaaggatccacta 299
Query: 697 tgggaagtttgtggcagaggccaagtttcaagagtcccctgaagcttacacgccagccat 756
||||| |||||||||||||||||||||||| ||| |||||||| |||||| |||||||||
Sbjct: 300 tgggatgtttgtggcagaggccaagtttcaggaggcccctgaatcttacatgccagccat 359
Query: 757 aatagccca 765
|||||||||
Sbjct: 360 aatagccca 368
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 432 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 491
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 492 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 540
>gb|CD235912.1|CD235912 SS1_24_H02.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_24_H02_A012 5', mRNA sequence
Length = 643
Score = 529 bits (267), Expect = e-148
Identities = 362/393 (92%), Gaps = 3/393 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 550 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 609
Query: 484 caaggatctgcctgagccccggttgccacctat 516
||||||||||||||||||| |||||||||||
Sbjct: 610 tgaggatctgcctgagccccgcttgccacctat 642
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|CD463446.1|CD463446 ETH1_44_D10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_D10_A002 5', mRNA sequence
Length = 760
Score = 529 bits (267), Expect = e-148
Identities = 373/408 (91%), Gaps = 3/408 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 245 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 304
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 305 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 364
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 365 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 424
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 425 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 484
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 485 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 544
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 545 tgaaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttctttcc 604
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggt 531
||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 605 tgaggatctgcctgagccccgcttgccacctatacnatacccaagggt 652
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 58 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 117
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 118 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 177
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 178 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 235
>gb|CN141779.1|CN141779 WOUND1_1_F11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_1_F11_A002 5', mRNA sequence
Length = 669
Score = 513 bits (259), Expect = e-144
Identities = 378/417 (90%), Gaps = 3/417 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 253 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 312
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| | ||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 313 ccaagggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 372
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 373 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 432
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 433 catcatattccgcctcttggagagagcccagttttgttacaatgctgagacatatgatag 492
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 493 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 552
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
|||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 553 tgaaaagctccatgcacaagttgggagatacaatagcccagatgagtaccctttctttcc 612
Query: 484 caaggatctgcctgagccccggttgccacctatgcaatacccaagggttttgcatcc 540
| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 613 tgatgatctgcctgagccccgcttgccacctatactatacccaagggttttgcatcc 669
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 66 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 125
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 126 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 185
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 186 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 243
>gb|BM324713.1|BM324713 PIC1_34_F09.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 622
Score = 492 bits (248), Expect = e-137
Identities = 348/381 (91%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 242 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 301
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 302 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 361
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 362 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 421
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 422 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 481
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 482 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 541
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttttc 483
| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 542 tngaaagctccatgcacaggttgggagatacaatagcccagatgagtaccctttcttttc 601
Query: 484 caaggatctgcctgagccccg 504
|||||||||||||||||||
Sbjct: 602 tgaggatctgcctgagccccg 622
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccg 107
|||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 55 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 114
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 115 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 174
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 175 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 232
>gb|CN131146.1|CN131146 RHOH1_46_E06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_E06_A002 3', mRNA sequence
Length = 816
Score = 476 bits (240), Expect = e-132
Identities = 291/308 (94%)
Strand = Plus / Plus
Query: 458 agcccagatgagcaccctttcttttccaaggatctgcctgagccccggttgccacctatg 517
|||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 2 agcccagatgagtaccctttctttcctgaggatctgcctgagccccgcttgccacctata 61
Query: 518 caatacccaagggttttgcatcccattgctgattctatcaatatcaacaaagagatttgg 577
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 caatacccaagggttttgcatcccattgctgattctataaatatcaacaaagagatttgg 121
Query: 578 aaaatgtattttgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgct 637
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaaatgtatttcgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgct 181
Query: 638 ggatccagtgctctttgtgacacaacctgcttgcaggcactctccagaaggatccactat 697
|||||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||
Sbjct: 182 ggatccagtgctgtttgtgacacgacctgcttgcaggcactctctaaaaggatccactat 241
Query: 698 gggaagtttgtggcagaggccaagtttcaagagtcccctgaagcttacacgccagccata 757
|||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct: 242 gggatgtttgtggcagaggccaagtttcaggaggcccctgaatcttacatgccagccata 301
Query: 758 atagccca 765
||||||||
Sbjct: 302 atagccca 309
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 373 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 432
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 433 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 481
>gb|CD462440.1|CD462440 ETH1_37_B04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_B04_A002 5', mRNA sequence
Length = 606
Score = 454 bits (229), Expect = e-126
Identities = 326/358 (91%), Gaps = 3/358 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 245 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 304
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 305 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 364
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 365 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 424
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| ||| |||||||| ||||||| |||||||||||
Sbjct: 425 catcatattcggcctcttggagagagcccagntttgttaccatgctgagacatatgatag 484
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 485 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 544
Query: 424 tgaaaagctccatgcacaggttgggagatacaagagcccagatgagcaccctttcttt 481
||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 545 tgaaaagctccatgcacaggttgggagatacaatagcccatatgagtaccctttcttt 602
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 58 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 117
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 118 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 177
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 178 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 235
>gb|CD213845.1|CD213845 HS1_53_C04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_53_C04_A012 5', mRNA sequence
Length = 577
Score = 440 bits (222), Expect = e-121
Identities = 302/328 (92%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 250 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 309
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| |||||||||||
Sbjct: 310 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaggagagggttga 369
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 370 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 429
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 430 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 489
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 490 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 549
Query: 424 tgaaaagctccatgcacaggttgggaga 451
||||||||||||||||||||||||||||
Sbjct: 550 tgaaaagctccatgcacaggttgggaga 577
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct: 75 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 134
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 135 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 194
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 195 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 240
>gb|CD429669.1|CD429669 ETH1_14_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_A06_A002 5', mRNA sequence
Length = 572
Score = 432 bits (218), Expect = e-119
Identities = 301/328 (91%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 245 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 304
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 305 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 364
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 365 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 424
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 425 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 484
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatatagttagagaaac 423
|||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 485 caatgctttccacatggatggttttgaaggatctttggttgaatatatggtcagagaaac 544
Query: 424 tgaaaagctccatgcacaggttgggaga 451
||||||||||||||||||||||||||||
Sbjct: 545 tgaaaagctccatgcacaggttgggaga 572
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 58 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 117
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 118 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 177
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 178 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 235
>gb|CN129539.1|CN129539 RHOH1_36_A11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_A11_A002 3', mRNA sequence
Length = 808
Score = 428 bits (216), Expect = e-118
Identities = 255/268 (95%)
Strand = Plus / Plus
Query: 498 agccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattctatca 557
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 agccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattctataa 60
Query: 558 atatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaag 617
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 atatcaacaaagagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaag 120
Query: 618 aaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggcac 677
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 121 aaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggcac 180
Query: 678 tctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccctg 737
|||| | ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||
Sbjct: 181 tctctaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccctg 240
Query: 738 aagcttacacgccagccataatagccca 765
|| |||||| ||||||||||||||||||
Sbjct: 241 aatcttacatgccagccataatagccca 268
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 332 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 391
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 392 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 440
>gb|CX617322.1|CX617322 GABR1_33_C02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_C02_A002 3', mRNA sequence
Length = 818
Score = 428 bits (216), Expect = e-118
Identities = 255/268 (95%)
Strand = Plus / Plus
Query: 498 agccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattctatca 557
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 agccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattctataa 60
Query: 558 atatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaag 617
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 atatcaacaaagagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaag 120
Query: 618 aaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggcac 677
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 121 aaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggcac 180
Query: 678 tctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccctg 737
|||| | ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||
Sbjct: 181 tctctaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccctg 240
Query: 738 aagcttacacgccagccataatagccca 765
|| |||||| ||||||||||||||||||
Sbjct: 241 aatcttacatgccagccataatagccca 268
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 332 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 391
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 392 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 440
>gb|CN151516.1|CN151516 WOUND1_75_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_H12_A002 5', mRNA sequence
Length = 433
Score = 422 bits (213), Expect = e-116
Identities = 340/381 (89%), Gaps = 6/381 (1%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcggcg---tcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 53 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 112
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| ||||||| ||||||||||
Sbjct: 113 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgtgttgccttcg 172
Query: 168 gaccagc---gcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccatag 224
||||||| | |||||| | ||||||| ||||||| ||||||||||| |||||||| |
Sbjct: 173 gaccagcagcgtccaggacccaggggctacgcgcggtcaacaactccgtcacgcccatgg 232
Query: 225 ctaaggtagagagggttgatcgaagtgacatattgacattggatagcatcagacaagttt 284
| |||| |||| |||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 233 ccaaggaagagggggttgatcgaagtgaaacattgacattggatagcattagacaagttt 292
Query: 285 tgattagactagaagacagcatcatatttggccttttggagagagcacagttttgttaca 344
|||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 293 tgattagacttgaagacagcatcatattcggcctcttggagagagcccagttttgttaca 352
Query: 345 atgctgatacatatgatagcaatgctttccacatggatggttttggaggatctttggttg 404
||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 353 atgctgagacatatgatagcaatgctttccaggtggatggttttgaaggatctttggttg 412
Query: 405 aatatatagttagagaaactg 425
||||||| || ||||||||||
Sbjct: 413 aatatatggtcagagaaactg 433
>gb|CX613100.1|CX613100 GABR1_6_F07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_6_F07_A002 3', mRNA sequence
Length = 809
Score = 422 bits (213), Expect = e-116
Identities = 255/269 (94%)
Strand = Plus / Plus
Query: 497 gagccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattctatc 556
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattctata 60
Query: 557 aatatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaa 616
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 aatatcagcaaagagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaa 120
Query: 617 gaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggca 676
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 121 gaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggca 180
Query: 677 ctctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccct 736
||||| | ||||||||||||||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 181 ctctctaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccct 240
Query: 737 gaagcttacacgccagccataatagccca 765
||| |||||| ||||||||||||||||||
Sbjct: 241 gaatcttacatgccagccataatagccca 269
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 333 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 392
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 393 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 441
>gb|CN151429.1|CN151429 WOUND1_75_H12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_75_H12_A002 3', mRNA sequence
Length = 760
Score = 418 bits (211), Expect = e-115
Identities = 253/267 (94%)
Strand = Plus / Plus
Query: 499 gccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattctatcaa 558
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 gccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattctataaa 60
Query: 559 tatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaaga 618
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 tatcaacaaagagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaaga 120
Query: 619 aggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggcact 678
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 121 aggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggcact 180
Query: 679 ctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccctga 738
| | | ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct: 181 ccctaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccctga 240
Query: 739 agcttacacgccagccataatagccca 765
| |||||| ||||||||||||||||||
Sbjct: 241 atcttacatgccagccataatagccca 267
Score = 145 bits (73), Expect = 8e-033
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 331 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 390
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || |||||||||||||||| |||||||||
Sbjct: 391 cagcccaccggtttacaagatgaggccgagcttggtcgttgagctgtac 439
>gb|CN137887.1|CN137887 OX1_60_G12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_G12_A002 3', mRNA sequence
Length = 647
Score = 414 bits (209), Expect = e-114
Identities = 257/273 (94%)
Strand = Plus / Plus
Query: 493 gcctgagccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattc 552
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctgagccccgcttgccacctatataatacccaagggttttgcatcccattgctgattc 60
Query: 553 tatcaatatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggt 612
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tataaatatcaacaaagagatttggaaaatgtatttcgatgaacttcttccaagattggt 120
Query: 613 gaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgca 672
||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 121 gaaagaagggagtgatggtaatgctggatccagtgctgtttgtgacacgccctgcttgca 180
Query: 673 ggcactctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtc 732
||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||| |
Sbjct: 181 ggcactctctaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggc 240
Query: 733 ccctgaagcttacacgccagccataatagccca 765
||||||| |||||| ||||||||||||||||||
Sbjct: 241 ccctgaatcttacatgccagccataatagccca 273
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 337 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 396
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 397 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 445
>gb|CN150766.1|CN150766 WOUND1_71_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_71_G06_A002 3', mRNA sequence
Length = 757
Score = 414 bits (209), Expect = e-114
Identities = 254/269 (94%)
Strand = Plus / Plus
Query: 497 gagccccggttgccacctatgcaatacccaagggttttgcatcccattgctgattctatc 556
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccccgcttgccacctatacaatacccaagggttttgcatcccattgctgattctata 60
Query: 557 aatatcaacaaagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaa 616
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 aatttcaacaaagagatttggaaaatgtatttggatgaacttcttccaagattggtgaaa 120
Query: 617 gaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggca 676
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 121 gaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggca 180
Query: 677 ctctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccct 736
|||| | ||||||||||||||||| |||||||||||||||||||||||| ||| |||||
Sbjct: 181 ctctgtaaaaggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccct 240
Query: 737 gaagcttacacgccagccataatagccca 765
||| |||||| ||||||||||||||||||
Sbjct: 241 gaatcttacatgccagccataatagccca 269
Score = 137 bits (69), Expect = 2e-030
Identities = 99/109 (90%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||| ||||||||||||||||| |||||| |||||| |||
Sbjct: 333 ggtggaagccaaagccaagatcttggggcaagaggtgaacatcggtgctgaggacagcgg 392
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || |||||||| |||||||| |||||||||
Sbjct: 393 cagcccaccggtttacaagatgaggccgagtttggtcgctgagctgtac 441
>gb|CN150427.1|CN150427 WOUND1_69_C11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_C11_A002 3', mRNA sequence
Length = 751
Score = 400 bits (202), Expect = e-110
Identities = 244/258 (94%)
Strand = Plus / Plus
Query: 508 gccacctatgcaatacccaagggttttgcatcccattgctgattctatcaatatcaacaa 567
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gccacctatacaatacccaagggttttgcatcccattgctgattctataaatatcaacaa 60
Query: 568 agagatttggaaaatgtattttgatgaacttcttccaagattggtgaaagaaggaagtga 627
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaagaaggaagtga 120
Query: 628 tggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggcactctccagaag 687
|||||||||||||||||||||| |||||||||| ||||| |||||||||||||| | |||
Sbjct: 121 tggtaatgctggatccagtgctgtttgtgacacgacctgtttgcaggcactctctaaaag 180
Query: 688 gatccactatgggaagtttgtggcagaggccaagtttcaagagtcccctgaagcttacac 747
|||||| ||||||| |||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 181 gatccattatgggatgtttgtggcagaggccaagtttcaggaggcccctgaatcttacat 240
Query: 748 gccagccataatagccca 765
||||||||||||||||||
Sbjct: 241 gccagccataatagccca 258
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 322 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 381
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 382 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 430
>gb|CN148554.1|CN148554 WOUND1_57_G10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_57_G10_A002 3', mRNA sequence
Length = 737
Score = 389 bits (196), Expect = e-106
Identities = 232/244 (95%)
Strand = Plus / Plus
Query: 522 acccaagggttttgcatcccattgctgattctatcaatatcaacaaagagatttggaaaa 581
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 acccaagggttttgcatcccattgctgattctataaatatcaacaaagagatttggaaaa 60
Query: 582 tgtattttgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggat 641
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtatttcgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggat 120
Query: 642 ccagtgctctttgtgacacaacctgcttgcaggcactctccagaaggatccactatggga 701
|||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 121 ccagtgctgtttgtgacacgacctgcttgcaggcactctttaaaaggatccactatggga 180
Query: 702 agtttgtggcagaggccaagtttcaagagtcccctgaagcttacacgccagccataatag 761
|||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||
Sbjct: 181 tgtttgtggcagaggccaagtttcaggaggcccctgaatcttacatgccagccataatag 240
Query: 762 ccca 765
||||
Sbjct: 241 ccca 244
Score = 145 bits (73), Expect = 8e-033
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 308 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 367
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || |||||||||||||||| |||||||||
Sbjct: 368 cagcccaccggtttacaagatgaggccgagcttggtcgttgagctgtac 416
>gb|CD463397.1|CD463397 ETH1_44_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_D10_A002 3', mRNA sequence
Length = 798
Score = 383 bits (193), Expect = e-104
Identities = 226/237 (95%)
Strand = Plus / Plus
Query: 529 ggttttgcatcccattgctgattctatcaatatcaacaaagagatttggaaaatgtattt 588
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 54 ggttttgcatcccattgctgattctataaatatcaacaaagagatttggaaaatgtattt 113
Query: 589 tgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 173
Query: 649 tctttgtgacacaacctgcttgcaggcactctccagaaggatccactatgggaagtttgt 708
| |||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 174 tgtttgtgacacgacctgcttgcaggcactctctaaaaggatccactatgggatgtttgt 233
Query: 709 ggcagaggccaagtttcaagagtcccctgaagcttacacgccagccataatagccca 765
|||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||
Sbjct: 234 ggcagaggccaagtttcaggaggcccctgaatcttacatgccagccataatagccca 290
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 354 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 413
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 414 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 462
>gb|BG102937.1|BG102937 RHIZ2_35_B10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 534
Score = 377 bits (190), Expect = e-102
Identities = 264/288 (91%), Gaps = 3/288 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 247 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 306
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 307 caaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 366
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 367 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 426
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 427 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 486
Query: 364 caatgctttccacatggatggttttggaggatctttggttgaatatat 411
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 487 caatgctttccacatggatggttttgaaggatctttggttgaatatat 534
Score = 163 bits (82), Expect = 3e-038
Identities = 146/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcggcg---tcgcccgctgctgctcacc 119
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 72 cgatggccttcaagctgggcaccaaggccgcggcggcggcctcgcccgcggctgctcacc 131
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 132 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 191
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 192 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 237
>gb|CW477551.1|CW477551 fsbb001f234o22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f234o22, DNA
sequence
Length = 727
Score = 335 bits (169), Expect = 4e-090
Identities = 202/213 (94%)
Strand = Plus / Minus
Query: 232 agagagggttgatcgaagtgacatattgacattggatagcatcagacaagttttgattag 291
||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 305 agagagggttgatcgaagtgaaacattgacattggatagcattagacaagttttgattag 246
Query: 292 actagaagacagcatcatatttggccttttggagagagcacagttttgttacaatgctga 351
||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 245 acttgaagacagcatcatattcggcctcttggagagagcccagttttgttacaatgctga 186
Query: 352 tacatatgatagcaatgctttccacatggatggttttggaggatctttggttgaatatat 411
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 185 gacatatgatagcaatgctttccacatggatggttttgaaggatctttggttgaatatat 126
Query: 412 agttagagaaactgaaaagctccatgcacaggt 444
|| |||||||||||||||||||||||||||||
Sbjct: 125 ggtcagagaaactgaaaagctccatgcacaggt 93
>gb|CD428654.1|CD428654 ETH1_33_H04.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_H04_A002 5', mRNA sequence
Length = 519
Score = 331 bits (167), Expect = 6e-089
Identities = 251/277 (90%), Gaps = 4/277 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 243 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 302
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 303 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 362
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 363 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 422
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgct-gatacatatgata 362
||||||||| ||||| ||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 423 catcatattcggcctcttggagagagcccagttttgttacaatgctggagacatatgata 482
Query: 363 gcaatgctttccacatggatggttttggaggatcttt 399
||||||||||||||||||||||||||| |||||||||
Sbjct: 483 gcaatgctttccacatggatggttttgaaggatcttt 519
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggc---ggcgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 56 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 115
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 116 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 175
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 176 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 233
>gb|BG241943.1|BG241943 RHIZ2_17_E12.b2_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 503
Score = 325 bits (164), Expect = 4e-087
Identities = 235/258 (91%), Gaps = 3/258 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 246 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 305
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 306 caaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 365
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 366 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 425
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 426 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 485
Query: 364 caatgctttccacatgga 381
||||||||||||||||||
Sbjct: 486 caatgctttccacatgga 503
Score = 163 bits (82), Expect = 3e-038
Identities = 146/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcggcg---tcgcccgctgctgctcacc 119
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 71 cgatggccttcaagctgggcaccaaggccgcggcggcggcctcgcccgcggctgctcacc 130
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 131 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 190
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 191 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 236
>gb|BE363909.1|BE363909 PI1_10_F01.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 501
Score = 321 bits (162), Expect = 6e-086
Identities = 236/260 (90%), Gaps = 3/260 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 242 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 301
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 302 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 361
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 362 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 421
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 422 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 481
Query: 364 caatgctttccacatggatg 383
||||||||||||||||||||
Sbjct: 482 caatgctttccacatggatg 501
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccg 107
|||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 55 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 114
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 115 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 174
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 175 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 232
>gb|CF430274.1|CF430274 PH1_27_B12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_B12_A002 3', mRNA sequence
Length = 707
Score = 315 bits (159), Expect = 4e-084
Identities = 189/199 (94%)
Strand = Plus / Plus
Query: 567 aagagatttggaaaatgtattttgatgaacttcttccaagattggtgaaagaaggaagtg 626
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagatttggaaaatgtatttcgatgaacttcttccaagattggtgaaagaaggaagtg 60
Query: 627 atggtaatgctggatccagtgctctttgtgacacaacctgcttgcaggcactctccagaa 686
||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | ||
Sbjct: 61 atggtaatgctggatccagtgctgtttgtgacacgacctgcttgcaggcactctctaaaa 120
Query: 687 ggatccactatgggaagtttgtggcagaggccaagtttcaagagtcccctgaagcttaca 746
||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 121 ggatccactatgggatgtttgtggcagaggccaagtttcaggaggcccctgaatcttaca 180
Query: 747 cgccagccataatagccca 765
||||||||||||||||||
Sbjct: 181 tgccagccataatagccca 199
Score = 145 bits (73), Expect = 8e-033
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | |
Sbjct: 263 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcag 322
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 323 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 371
>gb|BF588044.1|BF588044 FM1_37_A08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 497
Score = 307 bits (155), Expect = 9e-082
Identities = 229/253 (90%), Gaps = 3/253 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | || |||
Sbjct: 245 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccgggac 304
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 305 caaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 364
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 365 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 424
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 425 catcatattcggcctcttggagagagcccagttttgttacaatgctgagacatatgatag 484
Query: 364 caatgctttccac 376
|||||||||||||
Sbjct: 485 caatgctttccac 497
Score = 163 bits (82), Expect = 3e-038
Identities = 146/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcggcggcg---tcgcccgctgctgctcacc 119
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 70 cgatggccttcaagctgggcaccaaggccgcggcggcggcctcgcccgcggctgctcacc 129
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 130 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 189
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 190 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 235
>gb|BE357096.1|BE357096 DG1_146_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 681
Score = 303 bits (153), Expect = 1e-080
Identities = 183/193 (94%)
Strand = Plus / Plus
Query: 573 tttggaaaatgtattttgatgaacttcttccaagattggtgaaagaaggaagtgatggta 632
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggaaaatgtatttcgatgaacttcttccaagattggtgaaagaaggaagtgatggta 60
Query: 633 atgctggatccagtgctctttgtgacacaacctgcttgcaggcactctccagaaggatcc 692
||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 61 atgctggatccagtgctgtttgtgacacgacctgcttgcaggcactctctaaaaggatcc 120
Query: 693 actatgggaagtttgtggcagaggccaagtttcaagagtcccctgaagcttacacgccag 752
||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| |||||
Sbjct: 121 actatgggatgtttgtggcagaggccaagtttcaggaggcccctgaatcttacatgccag 180
Query: 753 ccataatagccca 765
|||||||||||||
Sbjct: 181 ccataatagccca 193
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 257 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 316
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 317 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 365
>gb|CD232477.1|CD232477 SS1_45_H01.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_H01_A012 5', mRNA sequence
Length = 495
Score = 297 bits (150), Expect = 9e-079
Identities = 221/244 (90%), Gaps = 3/244 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 252 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 311
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
||||||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 312 caaggggctacgcgcggccaacaactccgccacgcccatggccaaggaagagagggttga 371
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 372 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 431
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatgctgatacatatgatag 363
||||||||| ||||| ||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 432 catcatattcggcctcttggagagagcccacttttgttacaatgctgagacatatgatag 491
Query: 364 caat 367
||||
Sbjct: 492 caat 495
Score = 155 bits (78), Expect = 8e-036
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Plus
Query: 63 cgatggccttcaagctggccaccaaggccgcgg---cggcgtcgcccgctgctgctcacc 119
|||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||
Sbjct: 77 cgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcctgcggctgctcacc 136
Query: 120 gcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcggac---cagcgc 176
| || ||||||||||| |||||| |||| |||||||||| |||||||||| |||||
Sbjct: 137 ggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgccttcggaccagcagcgt 196
Query: 177 ccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
|||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 197 ccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 242
>gb|CL187620.1|CL187620 104_403_10901014_116_32464_089 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901014, DNA
sequence
Length = 659
Score = 258 bits (130), Expect = 8e-067
Identities = 142/146 (97%)
Strand = Plus / Minus
Query: 529 ggttttgcatcccattgctgattctatcaatatcaacaaagagatttggaaaatgtattt 588
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 ggttttgcatcccattgctgattctataaatatcaacaaagagatttggaaaatgtattt 259
Query: 589 tgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 199
Query: 649 tctttgtgacacaacctgcttgcagg 674
| |||||||||| |||||||||||||
Sbjct: 198 tgtttgtgacacgacctgcttgcagg 173
>gb|CW055478.1|CW055478 104_296_10517125_114_30174 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517125, DNA
sequence
Length = 611
Score = 258 bits (130), Expect = 8e-067
Identities = 142/146 (97%)
Strand = Plus / Plus
Query: 529 ggttttgcatcccattgctgattctatcaatatcaacaaagagatttggaaaatgtattt 588
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 208 ggttttgcatcccattgctgattctataaatatcaacaaagagatttggaaaatgtattt 267
Query: 589 tgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cgatgaacttcttccaagattggtgaaagaaggaagtgatggtaatgctggatccagtgc 327
Query: 649 tctttgtgacacaacctgcttgcagg 674
| |||||||||| |||||||||||||
Sbjct: 328 tgtttgtgacacgacctgcttgcagg 353
>gb|CD429643.1|CD429643 ETH1_14_A05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_14_A05_A002 5', mRNA sequence
Length = 476
Score = 258 bits (130), Expect = 8e-067
Identities = 201/224 (89%), Gaps = 3/224 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 253 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 312
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 313 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 372
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 373 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 432
Query: 304 catcatatttggccttttggagagagcacagttttgttacaatg 347
||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 433 catcatattcggcctcttggagagagcccagttttgttacaatg 476
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 66 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 125
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 126 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 185
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 186 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 243
>gb|CD432779.1|CD432779 ETH1_33_H04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_H04_A002 3', mRNA sequence
Length = 679
Score = 248 bits (125), Expect = 7e-064
Identities = 152/161 (94%)
Strand = Plus / Plus
Query: 605 agattggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacc 664
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1 agattggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacc 60
Query: 665 tgcttgcaggcactctccagaaggatccactatgggaagtttgtggcagaggccaagttt 724
||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 tgcttgcaggcactctctaaaaggatccactatgggatgtttgtggcagaggccaagttt 120
Query: 725 caagagtcccctgaagcttacacgccagccataatagccca 765
|| ||| |||||||| |||||| ||||||||||||||||||
Sbjct: 121 caggaggcccctgaatcttacatgccagccataatagccca 161
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 225 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 284
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 285 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 333
>gb|BG241601.1|BG241601 RHIZ2_17_E12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 240 bits (121), Expect = 2e-061
Identities = 151/161 (93%)
Strand = Plus / Plus
Query: 605 agattggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacc 664
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1 agattggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacc 60
Query: 665 tgcttgcaggcactctccagaaggatccactatgggaagtttgtggcagaggccaagttt 724
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 tgcttgcaggcactctttaaaaggatccactatgggatgtttgtggcagaggccaagttt 120
Query: 725 caagagtcccctgaagcttacacgccagccataatagccca 765
|| ||| |||||||| |||||| ||||||||||||||||||
Sbjct: 121 caggaggcccctgaatcttacatgccagccataatagccca 161
Score = 161 bits (81), Expect = 1e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 225 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 284
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 285 cagcccaccggtttacaagatgaggccgagcttggtcgccgagctgtac 333
>gb|CN142021.1|CN142021 WOUND1_3_H04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_3_H04_A002 3', mRNA sequence
Length = 664
Score = 238 bits (120), Expect = 7e-061
Identities = 147/156 (94%)
Strand = Plus / Plus
Query: 610 ggtgaaagaaggaagtgatggtaatgctggatccagtgctctttgtgacacaacctgctt 669
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1 ggtgaaagaaggaagtgatggtaatgctggatccagtgctgtttgtgacacgacctgctt 60
Query: 670 gcaggcactctccagaaggatccactatgggaagtttgtggcagaggccaagtttcaaga 729
|||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 61 gcaggcactctctaaaaggatccactatgggatgtttgtggcagaggccaagtttcagga 120
Query: 730 gtcccctgaagcttacacgccagccataatagccca 765
| |||||||| |||||| ||||||||||||||||||
Sbjct: 121 ggcccctgaatcttacatgccagccataatagccca 156
Score = 153 bits (77), Expect = 3e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 767 ggtggaggccaaagccaagatcttcgggcaagaggtgaacattggtgctaaggacaacgg 826
|||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||
Sbjct: 220 ggtggaagccaaagccaagatcttcgggcaagaggtgaacatcggtgctgaggacagcgg 279
Query: 827 cagcccaccggtctacaaaatcaggccgagcttggtcgccgagctgtac 875
|||||||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 280 cagcccaccggtttacaagatgaggccgagcttggtcgctgagctgtac 328
>gb|BI075324.1|BI075324 IP1_19_B08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 451
Score = 232 bits (117), Expect = 4e-059
Identities = 185/207 (89%), Gaps = 3/207 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 245 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 304
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 305 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 364
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 365 tcgaagtgaaacattgacattggatagcattagacaagttttgattagacttgaagacag 424
Query: 304 catcatatttggccttttggagagagc 330
||||||||| ||||| |||||||||||
Sbjct: 425 catcatattcggcctcttggagagagc 451
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcgg---cgtcgcccg 107
|||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 58 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 117
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 118 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 177
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 178 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 235
>gb|AW922986.1|AW922986 DG1_48_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 464
Score = 228 bits (115), Expect = 7e-058
Identities = 192/217 (88%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 127 tctcgcccgggggccggagggtacgagccgcgttgccttcggaccagc---gcccaggaa 183
||||||||| |||||| |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 242 tctcgcccgcgggccgcagggcgcgagccgcgttgccttcggaccagcagcgtccaggac 301
Query: 184 caaggggctccgcgcggccaacaactccgcaacgcccatagctaaggtagagagggttga 243
| ||||||| ||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 302 ccaggggctacgcgcggccaacaactccgtcacgcccatggccaaggaagagagggttga 361
Query: 244 tcgaagtgacatattgacattggatagcatcagacaagttttgattagactagaagacag 303
||||||||| | |||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 362 tcgaagtgaaacattgacattggatagcattagacaagttttgattaaacttgaagacag 421
Query: 304 catcatatttggccttttggagagagcacagttttgt 340
||||||||| ||||| ||||||||||| ||| |||||
Sbjct: 422 catcatattcggcctcttggagagagcccaggtttgt 458
Score = 163 bits (82), Expect = 3e-038
Identities = 155/178 (87%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 51 ggtggtaggtgtcgatggccttcaagctggccaccaaggccgcggcg---gcgtcgcccg 107
|||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 55 ggtggttggtggcgatggccttcaagctgggcaccaaggccgcggcggcggcgtcgcccg 114
Query: 108 ctgctgctcaccgcgggggtctcgcccgggggccggagggtacgagccgcgttgccttcg 167
| ||||||||||| || ||||||||||| |||||| |||| |||||||||| | |||||
Sbjct: 115 cggctgctcaccggggaggtctcgcccgcgggccgcagggcgcgagccgcgtcgtcttcg 174
Query: 168 gac---cagcgcccaggaacaaggggctccgcgcggccaacaactccgcaacgcccat 222
||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct: 175 gaccagcagcgtccaggaccaaggggctgcgcgcggccaacaactccgtcacgcccat 232
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 265,371
Number of Sequences: 832831
Number of extensions: 265371
Number of successful extensions: 76533
Number of sequences better than 0.5: 114
Number of HSP's better than 0.5 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76169
Number of HSP's gapped (non-prelim): 240
length of query: 892
length of database: 491,359,669
effective HSP length: 20
effective length of query: 872
effective length of database: 474,703,049
effective search space: 413941058728
effective search space used: 413941058728
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)