BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493976.2.1
(1294 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 757 0.0
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 557 e-157
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 557 e-157
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 557 e-157
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 521 e-146
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 504 e-140
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 464 e-128
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 448 e-124
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 448 e-124
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 448 e-124
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 434 e-120
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 404 e-111
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 349 4e-094
gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) So... 335 6e-090
gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) So... 287 1e-075
gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorgh... 280 3e-073
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 218 1e-054
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 210 2e-052
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 210 2e-052
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 210 2e-052
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 204 1e-050
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 204 1e-050
gb|CW325049.1|CW325049 104_819_11477484_148_35911_034 Sorgh... 202 6e-050
gb|BG322950.1|BG322950 EM1_13_B01.g1_A002 Embryo 1 (EM1) So... 202 6e-050
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 202 6e-050
gb|CW214761.1|CW214761 104_646_11194182_148_37053_017 Sorgh... 170 2e-040
gb|CW482454.1|CW482454 fsbb001f242i21k0 Sorghum methylation... 170 2e-040
gb|BG556478.1|BG556478 EM1_37_F06.g1_A002 Embryo 1 (EM1) So... 170 2e-040
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 168 8e-040
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 161 2e-037
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 161 2e-037
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 161 2e-037
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 161 2e-037
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 161 2e-037
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 161 2e-037
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 161 2e-037
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 161 2e-037
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 161 2e-037
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 161 2e-037
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 161 2e-037
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 161 2e-037
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 161 2e-037
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 161 2e-037
gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassino... 161 2e-037
gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stress... 157 3e-036
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 157 3e-036
gb|CW416233.1|CW416233 fsbb001f116l03k0 Sorghum methylation... 155 1e-035
gb|BG557821.1|BG557821 EM1_53_G02.b1_A002 Embryo 1 (EM1) So... 153 5e-035
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 153 5e-035
gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG... 147 3e-033
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 131 2e-028
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 131 2e-028
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 131 2e-028
gb|CD229817.1|CD229817 CCC1_19_G03.g1_A007 Callus culture/c... 131 2e-028
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 131 2e-028
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 131 2e-028
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 129 7e-028
gb|BG357140.1|BG357140 OV2_10_D01.b1_A002 Ovary 2 (OV2) Sor... 129 7e-028
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 129 7e-028
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 129 7e-028
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 129 7e-028
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 125 1e-026
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 125 1e-026
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 125 1e-026
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 125 1e-026
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 125 1e-026
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 121 2e-025
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 121 2e-025
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 121 2e-025
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 121 2e-025
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 121 2e-025
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 121 2e-025
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 121 2e-025
gb|CW320911.1|CW320911 104_814_11475263_148_35938_096 Sorgh... 121 2e-025
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 121 2e-025
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 121 2e-025
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 121 2e-025
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 121 2e-025
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 121 2e-025
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 113 4e-023
gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorg... 113 4e-023
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 113 4e-023
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 111 2e-022
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 109 6e-022
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 105 1e-020
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 105 1e-020
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 105 1e-020
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 105 1e-020
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 105 1e-020
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 105 1e-020
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 105 1e-020
gb|BE596166.1|BE596166 PI1_50_D05.b1_A002 Pathogen induced ... 103 4e-020
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 103 4e-020
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 101 2e-019
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 101 2e-019
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 101 2e-019
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 101 2e-019
gb|BI351300.1|BI351300 IP1_69_H01.b1_A002 Immature pannicle... 100 6e-019
gb|CW392761.1|CW392761 fsbb001f079i10k0 Sorghum methylation... 98 2e-018
gb|BI075536.1|BI075536 IP1_21_G05.g1_A002 Immature pannicle... 98 2e-018
gb|CW320910.1|CW320910 104_814_11475263_116_35934_096 Sorgh... 90 6e-016
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 86 9e-015
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 86 9e-015
gb|CN135093.1|CN135093 OX1_30_C01.g1_A002 Oxidatively-stres... 84 4e-014
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 84 4e-014
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 82 1e-013
gb|CW071439.1|CW071439 104_323_10591520_114_30474 Sorghum m... 80 6e-013
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 80 6e-013
gb|CW171728.1|CW171728 104_582_11155897_116_36529_005 Sorgh... 80 6e-013
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 80 6e-013
gb|CD462412.1|CD462412 ETH1_37_C09.g1_A002 Ethylene-treated... 78 2e-012
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 76 9e-012
gb|BE125768.1|BE125768 DG1_57_A08.b1_A002 Dark Grown 1 (DG1... 76 9e-012
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 74 4e-011
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 70 6e-010
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 68 2e-009
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 68 2e-009
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 68 2e-009
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 66 9e-009
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 66 9e-009
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 66 9e-009
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 66 9e-009
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 66 9e-009
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 66 9e-009
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 64 3e-008
gb|CW406236.1|CW406236 fsbb001f099c15k0 Sorghum methylation... 64 3e-008
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 64 3e-008
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 64 3e-008
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 64 3e-008
gb|CW408700.1|CW408700 fsbb001f102l07f0 Sorghum methylation... 62 1e-007
gb|CW032534.1|CW032534 104_261_10501433_115_30364 Sorghum m... 60 5e-007
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 60 5e-007
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 60 5e-007
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 60 5e-007
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 60 5e-007
gb|CW369378.1|CW369378 fsbb001f043m05f0 Sorghum methylation... 60 5e-007
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 60 5e-007
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 60 5e-007
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 58 2e-006
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 58 2e-006
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 58 2e-006
gb|CW294637.1|CW294637 104_775_11415292_116_36233_006 Sorgh... 58 2e-006
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 58 2e-006
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 58 2e-006
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 58 2e-006
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 58 2e-006
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 58 2e-006
gb|CW032533.1|CW032533 104_261_10501433_114_30363 Sorghum m... 56 8e-006
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 56 8e-006
gb|CW379039.1|CW379039 fsbb001f058b16k0 Sorghum methylation... 56 8e-006
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 56 8e-006
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 56 8e-006
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 56 8e-006
gb|BZ351153.1|BZ351153 hv19c03.g1 WGS-SbicolorF (JM107 adap... 54 3e-005
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 54 3e-005
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 54 3e-005
gb|CW061554.1|CW061554 104_305_10520462_114_30152 Sorghum m... 54 3e-005
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 54 3e-005
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 54 3e-005
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 52 1e-004
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 52 1e-004
gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) So... 52 1e-004
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 50 5e-004
gb|CL171844.1|CL171844 104_374_10889716_148_31774_004 Sorgh... 50 5e-004
gb|CW059831.1|CW059831 104_303_10519536_1_30042 Sorghum met... 50 5e-004
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 50 5e-004
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 50 5e-004
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 50 5e-004
gb|CW126000.1|CW126000 104_506_11112648_116_34721_088 Sorgh... 50 5e-004
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 50 5e-004
gb|CW204511.1|CW204511 104_632_11186581_148_36922_055 Sorgh... 50 5e-004
gb|CW221658.1|CW221658 104_656_11198028_116_37169_034 Sorgh... 50 5e-004
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 50 5e-004
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 50 5e-004
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 50 5e-004
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 50 5e-004
gb|BG322908.1|BG322908 EM1_15_F03.b1_A002 Embryo 1 (EM1) So... 50 5e-004
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 50 5e-004
gb|CN129116.1|CN129116 RHOH1_33_D01.g1_A002 Acid- and alkal... 50 5e-004
gb|CN146015.1|CN146015 WOUND1_36_G11.g1_A002 Wounded leaves... 50 5e-004
gb|BG357287.1|BG357287 OV2_12_A12.b1_A002 Ovary 2 (OV2) Sor... 48 0.002
gb|BZ413005.1|BZ413005 203a3_20 Subclones from BAC clones m... 46 0.008
gb|CL174842.1|CL174842 104_379_10891942_116_31769_310 Sorgh... 46 0.008
gb|CL189564.1|CL189564 104_406_10902382_116_32474_081 Sorgh... 46 0.008
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 46 0.008
gb|CW230207.1|CW230207 104_671_11207725_148_37263_049 Sorgh... 46 0.008
gb|CW267474.1|CW267474 104_737_11400757_116_35291_051 Sorgh... 46 0.008
gb|CW349738.1|CW349738 fsbb001f010l15k0 Sorghum methylation... 46 0.008
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 44 0.032
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 44 0.032
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 44 0.032
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 44 0.032
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 44 0.032
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 44 0.032
gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorgh... 42 0.13
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 42 0.13
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 42 0.13
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 42 0.13
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 42 0.13
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 42 0.13
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 42 0.13
gb|CW317087.1|CW317087 104_808_11473229_148_35857_019 Sorgh... 42 0.13
gb|CW348414.1|CW348414 fsbb001f008m13f0 Sorghum methylation... 42 0.13
gb|CW384654.1|CW384654 fsbb001f067m11f0 Sorghum methylation... 42 0.13
gb|CW406941.1|CW406941 fsbb001f100d03k0 Sorghum methylation... 42 0.13
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 42 0.13
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 42 0.13
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 42 0.13
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 40 0.50
gb|CW038470.1|CW038470 104_270_10504944_114_30385 Sorghum m... 40 0.50
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 40 0.50
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 40 0.50
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 40 0.50
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 40 0.50
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 40 0.50
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 40 0.50
gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation... 40 0.50
gb|CW496145.1|CW496145 fsbb001f288d19f0 Sorghum methylation... 40 0.50
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 40 0.50
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 40 0.50
gb|BG557596.1|BG557596 EM1_53_G02.g1_A002 Embryo 1 (EM1) So... 40 0.50
gb|BE362862.2|BE362862 DG1_90_B09.b1_A002 Dark Grown 1 (DG1... 40 0.50
gb|CD210072.1|CD210072 HS1_56_D03.g1_A012 Heat-shocked seed... 40 0.50
gb|CD211158.1|CD211158 HS1_61_B02.g1_A012 Heat-shocked seed... 40 0.50
gb|CD222562.1|CD222562 CCC1_22_G10.g1_A007 Callus culture/c... 40 0.50
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 757 bits (382), Expect = 0.0
Identities = 420/433 (96%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 75
Query: 214 cggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 cggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 135
Query: 274 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcag 333
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacagcggcctcag 195
Query: 334 ctgcggcgcctgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtct 393
|||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||
Sbjct: 196 ctgcggcgcctgcttcgaggtgcgctgcgacgcggcgggcggcgggagccactcgtgcct 255
Query: 394 gccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntc 453
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 256 gccgggctccgtcgtggtgacggccaccaacttctgccctcccaacaacgcgctcccctc 315
Query: 454 cgacgacggcggctggtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgtt 513
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 316 cgacgacggcggctggtgcaacccgccccgcgcccacttcgacatgtcgcagcccgtgtt 375
Query: 514 ccagcgcatcgcgctctacagggccggcattgttcccgtctcctaccgcagggttgcgtg 573
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 376 ccagcgcatcgcgctctacagggccggcattgtccccgtctcctaccgcagggtcgcgtg 435
Query: 574 caacaagaagggc 586
|||||||||||||
Sbjct: 436 caacaagaagggc 448
>gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899353, DNA
sequence
Length = 645
Score = 557 bits (281), Expect = e-157
Identities = 313/324 (96%)
Strand = Plus / Minus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 318
Query: 302 ctgagcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgc 361
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 317 ctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgaggtgcgctgc 258
Query: 362 gacgcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccacc 421
||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 257 gacgcggcgggcggcgggagccactcgtgcctgccgggctccgtcgtggtgacggccacc 198
Query: 422 aacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccg 481
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 197 aacttctgccctcccaacaacgcgctcccctccgacgacggcggctggtgcaacccgccc 138
Query: 482 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 78
Query: 542 attgttcccgtctcctaccgcagg 565
||||| ||||||||||||||||||
Sbjct: 77 attgtccccgtctcctaccgcagg 54
Score = 170 bits (86), Expect = 2e-040
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 507
Query: 214 cggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||||||||||||||||
Sbjct: 506 cggcggcggcgacgcgtccggcaccatggg 477
>gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i10, DNA
sequence
Length = 564
Score = 557 bits (281), Expect = e-157
Identities = 313/324 (96%)
Strand = Plus / Plus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 68
Query: 302 ctgagcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgc 361
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 69 ctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgaggtgcgctgc 128
Query: 362 gacgcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccacc 421
||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 129 gacgcggcgggcggcgggagccactcgtgcctgccgggctccgtcgtggtgacggccacc 188
Query: 422 aacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccg 481
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 189 aacttctgccctcccaacaacgcgctcccctccgacgacggcggctggtgcaacccgccc 248
Query: 482 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 308
Query: 542 attgttcccgtctcctaccgcagg 565
||||| ||||||||||||||||||
Sbjct: 309 attgtccccgtctcctaccgcagg 332
Score = 125 bits (63), Expect = 1e-026
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 471 gcagggtcgcgtgcaacaagaagggcggcatccggttcacaatcaacggccattcctact 530
Query: 621 tcaacctggtactggtgaccaacgtgg 647
|||||||||| ||||||||||||||||
Sbjct: 531 tcaacctggtgctggtgaccaacgtgg 557
>gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192l01, DNA
sequence
Length = 507
Score = 557 bits (281), Expect = e-157
Identities = 313/324 (96%)
Strand = Plus / Minus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 295
Query: 302 ctgagcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgc 361
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 294 ctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgaggtgcgctgc 235
Query: 362 gacgcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccacc 421
||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 234 gacgcggcgggcggcgggagccactcgtgcctgccgggctccgtcgtggtgacggccacc 175
Query: 422 aacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgccg 481
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 174 aacttctgccctcccaacaacgcgctcccctccgacgacggcggctggtgcaacccgccc 115
Query: 482 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctctacagggccggc 55
Query: 542 attgttcccgtctcctaccgcagg 565
||||| ||||||||||||||||||
Sbjct: 54 attgtccccgtctcctaccgcagg 31
Score = 91.7 bits (46), Expect = 2e-016
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 190 gtcctcggctcacgccaccttctacggcggcggcgatgcgtccggcaccatggg 243
||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 507 gtcctcggctcaccccaccttctacggcggcggcgacgcgtccggcaccatggg 454
>gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 550
Score = 521 bits (263), Expect = e-146
Identities = 292/302 (96%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 308
Query: 214 cggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 368
Query: 274 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcag 333
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 369 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacagcggcctcag 428
Query: 334 ctgcggcgcctgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtct 393
|||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||
Sbjct: 429 ctgcggcgcctgcttcgaggtgcgctgcgacgcggcgggcggcgggagccactcgtgcct 488
Query: 394 gccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntc 453
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 489 gccgggctccgtcgtggtgacggccaccaacttctgccctcccaacaacgcgctcccctc 548
Query: 454 cg 455
||
Sbjct: 549 cg 550
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 88 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 147
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 148 gccctctctcgcgggctg 165
>gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 504 bits (254), Expect = e-140
Identities = 290/301 (96%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 302
Query: 214 cggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 362
Query: 274 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcag 333
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 363 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacagcggcctcag 422
Query: 334 ctgcggcgcctgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtct 393
|||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||
Sbjct: 423 ctgcggcgcctgcttcgaggtgcgctgcgacgcggcgggcggcgggagccactcgtgcct 482
Query: 394 gccgggctccgtcgtggtgacggccaccaacttctgcccgcccaacaacgcgctcccntc 453
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 483 gccgggctccgtcgtggtgacggccaccaacttctgccc-tccaacaacgcgctcccctc 541
Query: 454 c 454
|
Sbjct: 542 c 542
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 82 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 141
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 142 gccctctctcgcgggctg 159
>gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 514
Score = 464 bits (234), Expect = e-128
Identities = 258/266 (96%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 308
Query: 214 cggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 368
Query: 274 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcag 333
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 369 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacagcggcctcag 428
Query: 334 ctgcggcgcctgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtct 393
|||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||
Sbjct: 429 ctgcggcgcctgcttcgaggtgcgctgcgacgcggcgggcggcgggagccactcgtgcct 488
Query: 394 gccgggctccgtcgtggtgacggcca 419
||||||||||||||||||||||||||
Sbjct: 489 gccgggctccgtcgtggtgacggcca 514
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 88 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 147
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 148 gccctctctcgcgggctg 165
>gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894229, DNA
sequence
Length = 704
Score = 448 bits (226), Expect = e-124
Identities = 295/318 (92%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 137 gcagggtcgcgtgcaacaagaagggcggcatccggttcacaatcaacggccattcctact 196
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 197 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 256
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
||| ||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 257 agggcgagcgctccgcggggtggcaggcgctgtcgcgcaactggggccagaactggcaga 316
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|||||||||||||||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 317 gcaacacgctcctggacgggcaagcgctctcgttccgcgtcaccaccagcgacggccgct 376
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||| |
Sbjct: 377 ccgtggtctccaacaacgccgccccccgcggctgggccttcggccagaccttcagcggcg 436
Query: 861 cccagttcaactgaacac 878
||||||||||||||||||
Sbjct: 437 cccagttcaactgaacac 454
Score = 121 bits (61), Expect = 2e-025
Identities = 107/119 (89%), Gaps = 5/119 (4%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 550 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 607
Query: 994 ttgctcctgggaattaccagtag-tttaggcctagtaatagcgcgggttttatcgtgct 1051
| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 608 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgct 666
>gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477484, DNA
sequence
Length = 612
Score = 448 bits (226), Expect = e-124
Identities = 295/318 (92%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 44 gcagggtcgcgtgcaacaagaagggcggcatccggttcacaatcaacggccattcctact 103
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 104 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 163
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
||| ||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 164 agggcgagcgctccgcggggtggcaggcgctgtcgcgcaactggggccagaactggcaga 223
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|||||||||||||||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 224 gcaacacgctcctggacgggcaagcgctctcgttccgcgtcaccaccagcgacggccgct 283
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||| |
Sbjct: 284 ccgtggtctccaacaacgccgccccccgcggctgggccttcggccagaccttcagcggcg 343
Query: 861 cccagttcaactgaacac 878
||||||||||||||||||
Sbjct: 344 cccagttcaactgaacac 361
Score = 121 bits (61), Expect = 2e-025
Identities = 107/119 (89%), Gaps = 5/119 (4%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 457 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 514
Query: 994 ttgctcctgggaattaccagtag-tttaggcctagtaatagcgcgggttttatcgtgct 1051
| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 515 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgct 573
>gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137o10, DNA
sequence
Length = 727
Score = 448 bits (226), Expect = e-124
Identities = 295/318 (92%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 31 gcagggtcgcgtgcaacaagaagggcggcatccggttcacaatcaacggccattcctact 90
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcggttgccgtga 680
|||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 91 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcggtggccgtga 150
Query: 681 aggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggcaga 740
||| ||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 151 agggcgagcgctccgcggggtggcaggcgctgtcgcgcaactggggccagaactggcaga 210
Query: 741 gcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggccgct 800
|||||||||||||||||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 211 gcaacacgctcctggacgggcaagcgctctcgttccgcgtcaccaccagcgacggccgct 270
Query: 801 ccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcggtg 860
||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||| |
Sbjct: 271 ccgtggtctccaacaacgccgccccccgcggctgggccttcggccagaccttcagcggcg 330
Query: 861 cccagttcaactgaacac 878
||||||||||||||||||
Sbjct: 331 cccagttcaactgaacac 348
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 444 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 501
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 502 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 561
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 562 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 615
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 616 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 675
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 676 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 722
>gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 425
Score = 434 bits (219), Expect = e-120
Identities = 243/251 (96%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 234
Query: 214 cggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtacggcaacctctacag 294
Query: 274 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacaacggcctcag 333
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 295 ccaggggtacggcaccaacacggcggcgctgagcacggcgctcttcaacagcggcctcag 354
Query: 334 ctgcggcgcctgcttcgaggtgcggtgcgacgcggcggggggcggcggccgctcgtgtct 393
|||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||| ||
Sbjct: 355 ctgcggcgcctgcttcgaggtgcgctgcgacgcggcgggcggcgggagccactcgtgcct 414
Query: 394 gccgggctccg 404
|||||||||||
Sbjct: 415 gccgggctccg 425
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 14 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 73
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 74 gccctctctcgcgggctg 91
>gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096492, DNA
sequence
Length = 308
Score = 404 bits (204), Expect = e-111
Identities = 230/239 (96%)
Strand = Plus / Minus
Query: 242 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcg 182
Query: 302 ctgagcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgc 361
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 181 ctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgaggtgcgctgc 122
Query: 362 gacgcggcggggggcggcggccgctcgtgtctgccgggctccgtcgtggtgacggccacc 421
||||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 121 gacgcggcgggcggcgggagccactcgtgcctgccgggctccgtcgtggtgacggccacc 62
Query: 422 aacttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccgcc 480
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 aacttctgccctcccaacaacgcgctcccctccgacgacggcggctggtgcaacccgcc 3
>gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194182, DNA
sequence
Length = 551
Score = 349 bits (176), Expect = 4e-094
Identities = 291/326 (89%), Gaps = 4/326 (1%)
Strand = Plus / Minus
Query: 244 cggggcgtgtgggtacggcaacctctacagccaggggtacggcaccaacacggcggcgct 303
||||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 445 cggggcgtgtgcgtacggcaacctttacaaccaggcatacggcaccaacacggcggcgct 386
Query: 304 gagcacggcgctcttcaacaacggcctcagctgcggcgcctgcttcgaggtgcggtgcga 363
|||||||||||| ||||||| ||||||||| |||||||| |||||||||||||| |||||
Sbjct: 385 gagcacggcgctattcaacagcggcctcagatgcggcgcgtgcttcgaggtgcgctgcga 326
Query: 364 cgcggcggggggcggcggccgctc-gtgtctgccgggctccgtcgtggtgacggccacca 422
|||||||| ||||| || || ||| || ||||||||||||||||||||||||||||
Sbjct: 325 cgcggcggccggcgggacccactgagtgcctcccgggctccgtcgtggtgacggccacca 266
Query: 423 acttctgcccgcccaacaacgcgctcccntccgacgacggcggctggtgcaacccg--cc 480
|||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||| |
Sbjct: 265 acttatgccctgacaacaacgcgctcccgtccgaggacggcggctggtgcaacccgacac 206
Query: 481 gcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcg-ctctacagggccg 539
||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 205 ccgcgcccacttagacatgtcgcagcccgtgttccagcgcatcgcgactgtacagggccg 146
Query: 540 gcattgttcccgtctcctaccgcagg 565
||||||| |||||||||||||||||
Sbjct: 145 gcattgtctccgtctcctaccgcagg 120
>gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 335 bits (169), Expect = 6e-090
Identities = 214/229 (93%)
Strand = Plus / Plus
Query: 650 ggcgccggcgacgtgcacgcggttgccgtgaaggccgaccgctcccccgggtggcaggcc 709
||||||||||||||||||||||| |||||||||| ||| |||||| | |||||||||||
Sbjct: 9 ggcgccggcgacgtgcacgcggtggccgtgaagggcgagcgctccgcggggtggcaggcg 68
Query: 710 ctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcaggccctg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 69 ctgtcgcgcaactggggccagaactggcagagcaacacgctcctggacgggcaagcgctc 128
Query: 770 tccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgc 829
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 129 tcgttccgcgtcaccaccagcgacggccgctccgtggtctccaacaacgccgccccccgc 188
Query: 830 ggctggtctttcggccagactttcagcggtgcccagttcaactgaacac 878
|||||| | ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 189 ggctgggccttcggccagaccttcagcggcgcccagttcaactgaacac 237
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 333 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 390
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 391 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 450
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 451 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 504
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 505 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 564
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 565 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 611
>gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 287 bits (145), Expect = 1e-075
Identities = 187/201 (93%)
Strand = Plus / Plus
Query: 678 tgaaggccgaccgctcccccgggtggcaggccctgtcgcgcaactggggccagaactggc 737
|||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tgaagggcgagcgctccgcggggtggcaggcgctgtcgcgcaactggggccagaactggc 60
Query: 738 agagcaacacgctcctggacgggcaggccctgtccttccgcgtcaccaccagcgacggcc 797
||||||||||||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 61 agagcaacacgctcctggacgggcaagcgctctcgttccgcgtcaccaccagcgacggcc 120
Query: 798 gctccgtgctctccaacaacgccgccccccgcggctggtctttcggccagactttcagcg 857
|||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 121 gctccgtggtctccaacaacgccgccccccgcggctgggccttcggccagaccttcagcg 180
Query: 858 gtgcccagttcaactgaacac 878
| |||||||||||||||||||
Sbjct: 181 gcgcccagttcaactgaacac 201
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 297 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 354
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 355 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 414
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 415 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 468
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 469 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 528
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 529 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 575
>gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894229, DNA
sequence
Length = 731
Score = 280 bits (141), Expect = 3e-073
Identities = 171/181 (94%)
Strand = Plus / Minus
Query: 698 gggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctggac 757
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gggtggcaggcgctgtcgcgcaactggggccagaactggcagagcaacacgctcctggac 668
Query: 758 gggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgtgctctccaacaac 817
||||| || || || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 667 gggcaagcgctctcgttccgcgtcaccaccagcgacggccgctccgtggtctccaacaac 608
Query: 818 gccgccccccgcggctggtctttcggccagactttcagcggtgcccagttcaactgaaca 877
|||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 607 gccgccccccgcggctgggccttcggccagaccttcagcggcgcccagttcaactgaaca 548
Query: 878 c 878
|
Sbjct: 547 c 547
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Minus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 451 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 394
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 393 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 334
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 333 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 280
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 279 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 220
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 219 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 173
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 218 bits (110), Expect = 1e-054
Identities = 220/257 (85%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 379 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 438
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | |||||||||||| ||||||| | |||| | |||||||
Sbjct: 439 tgcaacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcag 498
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 499 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcggg 558
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaa 649
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 atccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggcc 618
Query: 650 ggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 619 ggcgccggggacgtgca 635
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 178 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 237
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 238 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 297
Query: 320 aacaacggc 328
||| |||||
Sbjct: 298 aacgacggc 306
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || |||| || ||||||||||||||||||||||||||| ||||||| |
Sbjct: 662 ccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctcctcg 721
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgt 804
|||| ||| ||| ||||||| |||||| |||||||||||||| ||||
Sbjct: 722 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgt 770
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 210 bits (106), Expect = 2e-052
Identities = 219/257 (85%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 383 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 442
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | |||||||||||| ||||||| | |||| | |||||||
Sbjct: 443 tgcaacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcag 502
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 503 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcggg 562
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaa 649
|| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 563 atccggttcaccatcaacggccactcctacatcaacctggtgctggtgaccaacgtggcc 622
Query: 650 ggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 623 ggcgccggggacgtgca 639
Score = 153 bits (77), Expect = 5e-035
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 182 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgtgtgtgggtac 241
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 242 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 301
Query: 320 aacaacggc 328
||| |||||
Sbjct: 302 aacgacggc 310
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 210 bits (106), Expect = 2e-052
Identities = 219/257 (85%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 44 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 103
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | ||||| |||||| ||||||| | |||| | |||||||
Sbjct: 104 tgcaacccgccgcgcccgcacttggacatggcgcagccggccttcctccagatcgcgcag 163
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 164 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcggg 223
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaa 649
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 224 atccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggcc 283
Query: 650 ggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 284 ggcgccggggacgtgca 300
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || |||| || ||||||||||||||||||||||||||| ||||||| |
Sbjct: 327 ccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctcctcg 386
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgt 804
|||| ||| ||| ||||||| |||||| |||||||||||||| ||||
Sbjct: 387 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgt 435
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 210 bits (106), Expect = 2e-052
Identities = 219/257 (85%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 366 gtgacggccaccaacttttgcccgcccaactacggcctccccagcgacgacggcggctgg 425
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | |||||||||||| ||||||| | |||| | |||||||
Sbjct: 426 tgcaacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcag 485
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 486 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcggg 545
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaa 649
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 546 atccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggcc 605
Query: 650 ggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 606 ggcgccggggacgtgca 622
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 165 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 224
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 225 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 284
Query: 320 aacaacggc 328
||| |||||
Sbjct: 285 aacgacggc 293
Score = 73.8 bits (37), Expect = 4e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcc 752
||||||||||| || |||| || ||||||||||||||||||||||||||| ||||||
Sbjct: 649 ccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctcc 705
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 204 bits (103), Expect = 1e-050
Identities = 204/238 (85%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 388 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 447
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | |||||||||||| ||||||| | |||| | |||||||
Sbjct: 448 tgcaacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcag 507
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 508 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcggg 567
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtgg 647
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 568 atccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtgg 625
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 187 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 246
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 247 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 306
Query: 320 aacaacggc 328
||| |||||
Sbjct: 307 aacgacggc 315
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 204 bits (103), Expect = 1e-050
Identities = 220/258 (85%), Gaps = 1/258 (0%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacgg-cggctg 468
|||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||
Sbjct: 382 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacgggcggctg 441
Query: 469 gtgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgct 528
|||||||||||||||| | |||||||||||| ||||||| | |||| | |||||||
Sbjct: 442 gtgcaacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgca 501
Query: 529 ctacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcgg 588
||| | |||||||| || |||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 502 gtaccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgg 561
Query: 589 catacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtgga 648
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 562 gatccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggc 621
Query: 649 aggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 622 cggcgccggggacgtgca 639
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 181 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 240
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 241 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 300
Query: 320 aacaacggc 328
||| |||||
Sbjct: 301 aacgacggc 309
Score = 105 bits (53), Expect = 1e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || |||| || ||||||||||||||||||||||||||| ||||||| |
Sbjct: 666 ccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctcctcg 725
Query: 756 acgggcaggccctgtccttccgcgtcaccaccagcgacggccgctccgt 804
|||| ||| ||| ||||||| |||||| |||||||||||||| ||||
Sbjct: 726 acggccagagcctctccttccaggtcaccgccagcgacggccgcaccgt 774
>gb|CW325049.1|CW325049 104_819_11477484_148_35911_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477484, DNA
sequence
Length = 672
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Minus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 577 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 520
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 519 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 460
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 459 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 406
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 405 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 346
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 345 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 299
>gb|BG322950.1|BG322950 EM1_13_B01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 518
Score = 202 bits (102), Expect = 6e-050
Identities = 247/287 (86%), Gaps = 15/287 (5%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 205 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 262
Query: 994 ttgctcctgggaattaccagtagttt-aggcctagtaatagcgcgggttttatcgtgctt 1052
| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||
Sbjct: 263 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgctg 322
Query: 1053 gcgttagcatggtgttt--tagtgttccttggttgtatccggcttggaaattggaggtgg 1110
| ||||||||| | | | |||||| |||||| || ||||||| ||||||| ||||
Sbjct: 323 g-----gcatggtgtgtgttggcgttcctgggttgtttc-ggcttgggaattggaagtgg 376
Query: 1111 tggtaa-ggctggtctgcagataaacggaggcaggctgccttgtatcacccgccaattat 1169
|||||| |||||| || |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 377 tggtaaaggctggcttggagattaacggaggcaggccgccttgtatcacccgccaattaa 436
Query: 1170 gcgtttagggcctcatggtgatgg-ctccttcgagatgagatgtttt 1215
|||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 437 gcgttttgggcctcatggtgatggcctcttttgagaagagatgtttt 483
Score = 170 bits (86), Expect = 2e-040
Identities = 101/106 (95%)
Strand = Plus / Plus
Query: 773 ttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgcggc 832
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 ttccgcgtcaccaccagcgacggccgctccgtggtctccaacaacgccgccccccgcggc 63
Query: 833 tggtctttcggccagactttcagcggtgcccagttcaactgaacac 878
||| | ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 64 tgggccttcggccagaccttcagcggcgcccagttcaactgaacac 109
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 202 bits (102), Expect = 6e-050
Identities = 218/257 (84%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 251 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 310
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
||||||||||||||| | |||||||||||| |||| || | |||| | |||||||
Sbjct: 311 tgcaacccgccgcgcccgcacttcgacatggcgcaaccggccttcctccagatcgcgcag 370
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||||| | ||||| | ||| |||||||||||
Sbjct: 371 taccgcgccggcatcgtgcccgtcgcctacaggagggtgccatgcgtgaagaagggcggg 430
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgtggaa 649
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 431 atccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggcc 490
Query: 650 ggcgccggcgacgtgca 666
|||||||| ||||||||
Sbjct: 491 ggcgccggggacgtgca 507
Score = 109 bits (55), Expect = 6e-022
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 155 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 214
Query: 260 ggcaacctctacagccaggggtacggcacca 290
|| ||| | |||||| ||||||||||||||
Sbjct: 215 gggaacatgtacagcacggggtacggcacca 245
Score = 79.8 bits (40), Expect = 6e-013
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 696 ccgggtggcaggccctgtcgcgcaactggggccagaactggcagagcaacacgctcctgg 755
||||||||||| || |||| || ||||||||||||||||||||||||||| ||||||| |
Sbjct: 534 ccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgctcctcg 593
Query: 756 acgg 759
||||
Sbjct: 594 acgg 597
>gb|CW214761.1|CW214761 104_646_11194182_148_37053_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194182, DNA
sequence
Length = 650
Score = 170 bits (86), Expect = 2e-040
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 522
Query: 214 cggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||||||||||||||||
Sbjct: 523 cggcggcggcgacgcgtccggcaccatggg 552
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 302 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 361
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 362 gccctctctcgcgggctg 379
>gb|CW482454.1|CW482454 fsbb001f242i21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242i21, DNA
sequence
Length = 316
Score = 170 bits (86), Expect = 2e-040
Identities = 89/90 (98%)
Strand = Plus / Minus
Query: 154 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gccgcacggccacgcaccgctcggaggtggcgcgtggtcctcggctcacgccaccttcta 37
Query: 214 cggcggcggcgatgcgtccggcaccatggg 243
|||||||||||| |||||||||||||||||
Sbjct: 36 cggcggcggcgacgcgtccggcaccatggg 7
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 41 ccaatggcgcctcgccaagccgtcctcgcggtcgtggtcctcgccgcgctgctcccgttc 100
|||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| ||
Sbjct: 257 ccaatggcgcctcgccaagccgtcctggcggccgtggtcctcgccgcgctgttcccgctc 198
Query: 101 gccctctctcgcgggctg 118
||||||||||||||||||
Sbjct: 197 gccctctctcgcgggctg 180
>gb|BG556478.1|BG556478 EM1_37_F06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 357
Score = 170 bits (86), Expect = 2e-040
Identities = 101/106 (95%)
Strand = Plus / Plus
Query: 773 ttccgcgtcaccaccagcgacggccgctccgtgctctccaacaacgccgccccccgcggc 832
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 14 ttccgcgtcaccaccagcgacggccgctccgtggtctccaacaacgccgccccccgcggc 73
Query: 833 tggtctttcggccagactttcagcggtgcccagttcaactgaacac 878
||| | ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 74 tgggccttcggccagaccttcagcggcgcccagttcaactgaacac 119
Score = 121 bits (61), Expect = 2e-025
Identities = 107/119 (89%), Gaps = 5/119 (4%)
Strand = Plus / Plus
Query: 936 ccccgattggagcctgccgagag--gcgccatggttttatgaatggtctgcacctcgcat 993
|||| |||||||| ||||||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 215 ccccaattggagcttgccgagagaggcgccatggttttatgagtggt--gcatctcgcat 272
Query: 994 ttgctcctgggaattaccagtag-tttaggcctagtaatagcgcgggttttatcgtgct 1051
| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 273 tggctcctgggaattaccagtagttttaggcctagtattagcgcaggttttatcgtgct 331
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 168 bits (85), Expect = 8e-040
Identities = 198/236 (83%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 411 gtgacggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctgg 470
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
|||||||||||||| | |||||||||||| | |||||| |||| | ||||||||
Sbjct: 471 tgcaacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcag 530
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||| | | || || ||||| ||||||||||||
Sbjct: 531 taccgcgccggcatcgtgcccgtcgccttcaggagagtgccgtgcgtgaagaagggcggc 590
Query: 590 atacgtttcaccatcaacggccactcctacttcaacctggtactggtgaccaacgt 645
|| || |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 591 atccggttcaccatcaacgggcactcctacttcaacctggtgctggtgaccaacgt 646
Score = 147 bits (74), Expect = 3e-033
Identities = 117/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 209 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 268
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgag-cacggcgctctt 318
|||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 269 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagncacggcgctgtt 328
Query: 319 caacaacggc 328
|||| |||||
Sbjct: 329 caacgacggc 338
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 172 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 231
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 232 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 291
Query: 320 aacaacggc 328
||| |||||
Sbjct: 292 aacgacggc 300
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 373 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 432
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 433 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 470
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 211 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 270
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 271 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 330
Query: 320 aacaacggc 328
||| |||||
Sbjct: 331 aacgacggc 339
Score = 101 bits (51), Expect = 2e-019
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 412 gtgacggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctgg 471
Query: 470 tgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||| | ||||||||||||
Sbjct: 472 tgcaacccgccgcggccgcacttcgacatg 501
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 165 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 224
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 225 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 284
Query: 320 aacaacggc 328
||| |||||
Sbjct: 285 aacgacggc 293
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 366 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 425
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 426 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 463
>gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 437
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 208 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 267
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 268 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 327
Query: 320 aacaacggc 328
||| |||||
Sbjct: 328 aacgacggc 336
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaa 438
||||||||||||||||||||||| |||||
Sbjct: 409 gtgacggccaccaacttctgccctcccaa 437
>gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 411
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 169 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 228
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 229 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 288
Query: 320 aacaacggc 328
||| |||||
Sbjct: 289 aacgacggc 297
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaac 439
||||||||||||||||||||||||||||||
Sbjct: 370 gtgacggccaccaacttctgcccgcccaac 399
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 168 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 227
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 228 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 287
Query: 320 aacaacggc 328
||| |||||
Sbjct: 288 aacgacggc 296
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 369 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 428
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 429 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 466
>gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 202 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 261
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 262 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 321
Query: 320 aacaacggc 328
||| |||||
Sbjct: 322 aacgacggc 330
Score = 101 bits (51), Expect = 2e-019
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 403 gtgacggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctgg 462
Query: 470 tgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||| | ||||||||||||
Sbjct: 463 tgcaacccgccgcggccgcacttcgacatg 492
>gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 444
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 202 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 261
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 262 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 321
Query: 320 aacaacggc 328
||| |||||
Sbjct: 322 aacgacggc 330
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaac 439
||||||||||||||||||||||| ||||||
Sbjct: 403 gtgacggccaccaacttctgccctcccaac 432
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 179 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 238
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 239 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 298
Query: 320 aacaacggc 328
||| |||||
Sbjct: 299 aacgacggc 307
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 380 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 439
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 440 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 477
>gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_A06_A002 5', mRNA sequence
Length = 520
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 186 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 245
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 246 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 305
Query: 320 aacaacggc 328
||| |||||
Sbjct: 306 aacgacggc 314
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 387 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 446
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 447 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 484
>gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_23_G06_A002 5', mRNA sequence
Length = 443
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 199 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 258
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 259 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 318
Query: 320 aacaacggc 328
||| |||||
Sbjct: 319 aacgacggc 327
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaac 439
||||||||||||||||||||||||||||||
Sbjct: 400 gtgacggccaccaacttctgcccgcccaac 429
>gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D09_A002 5', mRNA sequence
Length = 779
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 486 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 545
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 546 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 605
Query: 320 aacaacggc 328
||| |||||
Sbjct: 606 aacgacggc 614
Score = 117 bits (59), Expect = 3e-024
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 687 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 746
Query: 470 tgcaacccgccgcgcgcccacttcgacatg 499
||||||||||||||| | ||||||||||||
Sbjct: 747 tgcaacccgccgcgcccgcacttcgacatg 776
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 211 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 270
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 271 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 330
Query: 320 aacaacggc 328
||| |||||
Sbjct: 331 aacgacggc 339
Score = 97.6 bits (49), Expect = 2e-018
Identities = 159/196 (81%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||||||||| |||||| ||| ||||| |||| |||||||||||
Sbjct: 412 gtgacggccaccaacttctgccctcccaactacggcctccccagcgacaacggcggctgg 471
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcccgtgttccagcgcatcgcgctc 529
|||||||||||||| | |||||||||||| | |||||| |||| | ||||||||
Sbjct: 472 tgcaacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcag 531
Query: 530 tacagggccggcattgttcccgtctcctaccgcagggttgcgtgcaacaagaagggcggc 589
||| | |||||||| || |||||| ||| | | || || ||||| ||||||||||||
Sbjct: 532 taccgcgccggcatcgtgcccgtcgccttcaggagagtgccgtgcgtgaagaagggcggc 591
Query: 590 atacgtttcaccatca 605
|| || ||||||||||
Sbjct: 592 atccggttcaccatca 607
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 201 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 260
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 261 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 320
Query: 320 aacaacggc 328
||| |||||
Sbjct: 321 aacgacggc 329
Score = 101 bits (51), Expect = 2e-019
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 402 gtgacggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctgg 461
Query: 470 tgcaacccgccgcgcgcccacttcgacatg 499
|||||||||||||| | ||||||||||||
Sbjct: 462 tgcaacccgccgcggccgcacttcgacatg 491
>gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F03_A002 5', mRNA sequence
Length = 322
Score = 161 bits (81), Expect = 2e-037
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 174 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 233
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 234 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 293
Query: 320 aacaacggc 328
||| |||||
Sbjct: 294 aacgacggc 302
>gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_E09_A002 5', mRNA sequence
Length = 675
Score = 157 bits (79), Expect = 3e-036
Identities = 112/123 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 515 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 574
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 575 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 634
Query: 320 aac 322
|||
Sbjct: 635 aac 637
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 157 bits (79), Expect = 3e-036
Identities = 112/123 (91%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 167 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 226
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 227 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggcgctgttc 286
Query: 320 aac 322
|||
Sbjct: 287 aac 289
Score = 125 bits (63), Expect = 1e-026
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 410 gtgacggccaccaacttctgcccgcccaacaacgcgctcccntccgacgacggcggctgg 469
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 368 gtgacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 427
Query: 470 tgcaacccgccgcgcgcccacttcgacatgtcgcagcc 507
||||||||||||||| | |||||||||||| |||||||
Sbjct: 428 tgcaacccgccgcgcccgcacttcgacatggcgcagcc 465
>gb|CW416233.1|CW416233 fsbb001f116l03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f116l03, DNA
sequence
Length = 215
Score = 155 bits (78), Expect = 1e-035
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 561 gcagggttgcgtgcaacaagaagggcggcatacgtttcaccatcaacggccactcctact 620
||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct: 106 gcagggtcgcgtgcaacaagaagggcggcatccggttcacaatcaacggccattcctact 165
Query: 621 tcaacctggtactggtgaccaacgtggaaggcgccggcgacgtgcacgcg 670
|||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 166 tcaacctggtgctggtgaccaacgtgggcggcgccggcgacgtgcacgcg 215
>gb|BG557821.1|BG557821 EM1_53_G02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 319
Score = 153 bits (77), Expect = 5e-035
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 199 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcgggtac 258
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 259 ggcaacctgtacagcaccgggtacggcacgaacacggcggcgctgagcacggcgctgttc 318
Query: 320 a 320
|
Sbjct: 319 a 319
>gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_19_A02_A012 5', mRNA sequence
Length = 372
Score = 153 bits (77), Expect = 5e-035
Identities = 116/129 (89%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 174 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 233
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacggcgctcttc 319
|| ||| | |||||| |||||||||||| ||||| |||||||||||||||||||| |||
Sbjct: 234 gggaacatgtacagcacggggtacggcacgaacactgcggcgctgagcacggcgctgttc 293
Query: 320 aacaacggc 328
||| |||||
Sbjct: 294 aacgacggc 302
>gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 387
Score = 147 bits (74), Expect = 3e-033
Identities = 117/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 200 cacgccaccttctacggcggcggcgatgcgtccggcaccatgggcggggcgtgtgggtac 259
|||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 177 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 236
Query: 260 ggcaacctctacagccaggggtacggcaccaacacggcggcgctgagcacgg-cgctctt 318
|| ||| | |||||| |||||||||||| |||||||||||||||||||||| |||| ||
Sbjct: 237 gggaacatgtacagcacggggtacggcacgaacacggcggcgctgagcacggtcgctgtt 296
Query: 319 caacaacggc 328
|||| |||||
Sbjct: 297 caacgacggc 306
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 446,839
Number of Sequences: 832831
Number of extensions: 446839
Number of successful extensions: 123267
Number of sequences better than 0.5: 225
Number of HSP's better than 0.5 without gapping: 224
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 122653
Number of HSP's gapped (non-prelim): 561
length of query: 1294
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1274
effective length of database: 474,703,049
effective search space: 604771684426
effective search space used: 604771684426
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)