BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots ... 842 0.0
gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorgh... 577 e-162
gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorgh... 577 e-162
gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation... 418 e-115
gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum m... 398 e-109
gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation... 349 6e-094
gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorgh... 345 1e-092
gb|CW262736.1|CW262736 104_730_11230244_116_35224_072 Sorgh... 341 2e-091
gb|CW262737.1|CW262737 104_730_11230244_148_35220_072 Sorgh... 341 2e-091
gb|CW400388.1|CW400388 fsbb001f090k19f0 Sorghum methylation... 341 2e-091
gb|CW457045.1|CW457045 fsbb001f202l01f0 Sorghum methylation... 337 2e-090
gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation... 317 2e-084
gb|CW469126.1|CW469126 fsbb001f221l01f0 Sorghum methylation... 315 9e-084
gb|CW498973.1|CW498973 fsbb001f293i01f0 Sorghum methylation... 281 1e-073
gb|CW050896.1|CW050896 104_291_10514924_114_30192 Sorghum m... 256 7e-066
gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorgh... 248 2e-063
gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorgh... 248 2e-063
gb|CW156831.1|CW156831 104_560_11146901_148_36380_031 Sorgh... 246 7e-063
gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorgh... 230 4e-058
gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorgh... 230 4e-058
gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation... 230 4e-058
gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation... 230 4e-058
gb|CW449571.1|CW449571 fsbb001f183m13k0 Sorghum methylation... 224 3e-056
gb|CW156830.1|CW156830 104_560_11146901_116_36379_031 Sorgh... 218 2e-054
gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorgh... 216 6e-054
gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation... 216 6e-054
gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/c... 214 2e-053
gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum m... 210 4e-052
gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/ce... 210 4e-052
gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/ce... 206 6e-051
gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/c... 206 6e-051
gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient se... 206 6e-051
gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkal... 206 6e-051
gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient se... 198 1e-048
gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedl... 196 6e-048
gb|CW022071.1|CW022071 104_161_10431625_1_30006 Sorghum met... 190 3e-046
gb|CW022072.1|CW022072 104_161_10431625_5_30007 Sorghum met... 190 3e-046
gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2... 188 1e-045
gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/ce... 188 1e-045
gb|CW073779.1|CW073779 104_339_10781480_114_31371_344 Sorgh... 184 2e-044
gb|CX618822.1|CX618822 GABR1_41_H05.g1_A002 GA- or brassino... 178 1e-042
gb|CL181797.1|CL181797 104_392_10896983_116_31926_359 Sorgh... 161 3e-037
gb|CW042642.1|CW042642 104_276_10507205_114_30482 Sorghum m... 161 3e-037
gb|CW050897.1|CW050897 104_291_10514924_115_30196 Sorghum m... 161 3e-037
gb|CW065109.1|CW065109 104_311_10522954_114_30122 Sorghum m... 161 3e-037
gb|CW385193.1|CW385193 fsbb001f068j07f0 Sorghum methylation... 161 3e-037
gb|CW385194.1|CW385194 fsbb001f068j07k0 Sorghum methylation... 161 3e-037
gb|CW427480.1|CW427480 fsbb001f139i05k0 Sorghum methylation... 161 3e-037
gb|CW023223.1|CW023223 104_163_10432326_1_30001 Sorghum met... 157 5e-036
gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced ... 155 2e-035
gb|CN135740.1|CN135740 OX1_38_E07.g1_A002 Oxidatively-stres... 155 2e-035
gb|CW265997.1|CW265997 104_735_11232189_116_35271_087 Sorgh... 147 5e-033
gb|CF484409.1|CF484409 POL1_25_D08.b1_A002 Pollen Sorghum b... 147 5e-033
gb|CW162564.1|CW162564 104_569_11151007_148_36439_018 Sorgh... 143 7e-032
gb|CW194596.1|CW194596 104_617_11180180_148_36790_066 Sorgh... 143 7e-032
gb|CW199055.1|CW199055 104_624_11183306_148_36855_015 Sorgh... 143 7e-032
gb|CF480551.1|CF480551 POL1_66_A09.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF480720.1|CF480720 POL1_67_B04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF480721.1|CF480721 POL1_67_B05.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF481221.1|CF481221 POL1_70_E03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF481558.1|CF481558 POL1_72_E04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF482541.1|CF482541 POL1_7_C12.g1_A002 Pollen Sorghum bi... 143 7e-032
gb|CF483034.1|CF483034 POL1_10_G04.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483368.1|CF483368 POL1_21_F08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483384.1|CF483384 POL1_21_H05.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF483505.1|CF483505 POL1_22_E10.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF484492.1|CF484492 POL1_25_D08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF485659.1|CF485659 POL1_32_G08.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486075.1|CF486075 POL1_35_C03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486748.1|CF486748 POL1_39_B11.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF486935.1|CF486935 POL1_40_F03.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF487273.1|CF487273 POL1_42_F11.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF488213.1|CF488213 POL1_48_A10.g1_A002 Pollen Sorghum b... 143 7e-032
gb|CF480611.1|CF480611 POL1_66_G02.g1_A002 Pollen Sorghum b... 135 2e-029
gb|CD204267.1|CD204267 HS1_4_A06.g1_A012 Heat-shocked seedl... 125 2e-026
gb|CW298321.1|CW298321 104_780_11462518_116_35647_081 Sorgh... 119 1e-024
gb|CW394782.1|CW394782 fsbb001f082i17f0 Sorghum methylation... 119 1e-024
gb|CF483263.1|CF483263 POL1_21_B02.b1_A002 Pollen Sorghum b... 115 2e-023
gb|CC059780.1|CC059780 ii28f12.b1 WGS-SbicolorF (DH5a methy... 113 7e-023
gb|CW164970.1|CW164970 104_573_11152260_148_36476_046 Sorgh... 113 7e-023
gb|CW265998.1|CW265998 104_735_11232189_148_35267_087 Sorgh... 113 7e-023
gb|CF483326.1|CF483326 POL1_21_B02.g1_A002 Pollen Sorghum b... 113 7e-023
gb|CF485817.1|CF485817 POL1_33_G12.g1_A002 Pollen Sorghum b... 109 1e-021
gb|CF485961.1|CF485961 POL1_34_G06.g1_A002 Pollen Sorghum b... 107 4e-021
gb|CW100262.1|CW100262 104_467_11004005_116_34388_021 Sorgh... 105 2e-020
gb|CL154537.1|CL154537 104_339_10781480_116_31372_344 Sorgh... 92 2e-016
gb|CW199054.1|CW199054 104_624_11183306_116_36856_015 Sorgh... 92 2e-016
gb|CN127791.1|CN127791 RHOH1_25_C09.b1_A002 Acid- and alkal... 86 1e-014
gb|CW107380.1|CW107380 104_477_11096552_116_34475_022 Sorgh... 84 6e-014
gb|CW225943.1|CW225943 104_663_11204625_148_37212_035 Sorgh... 84 6e-014
gb|CW269967.1|CW269967 104_741_11402135_148_35326_090 Sorgh... 84 6e-014
gb|CW283796.1|CW283796 104_760_11409436_116_35484_010 Sorgh... 84 6e-014
gb|CW283797.1|CW283797 104_760_11409436_148_35488_010 Sorgh... 84 6e-014
gb|CW415441.1|CW415441 fsbb001f115i18f0 Sorghum methylation... 84 6e-014
gb|CW097767.1|CW097767 104_464_11002644_116_34363_048 Sorgh... 82 2e-013
gb|CW198338.1|CW198338 104_623_11182923_116_36845_016 Sorgh... 82 2e-013
gb|CW200271.1|CW200271 104_625_11183974_116_36860_083 Sorgh... 82 2e-013
gb|CW244061.1|CW244061 104_704_11220385_116_37577_001 Sorgh... 82 2e-013
gb|CW311778.1|CW311778 104_801_11470408_116_36284_058 Sorgh... 82 2e-013
gb|CW500596.1|CW500596 fsbb001f295p19f0 Sorghum methylation... 82 2e-013
gb|CW500597.1|CW500597 fsbb001f295p19k0 Sorghum methylation... 82 2e-013
gb|CW070613.1|CW070613 104_321_10526871_1_30090 Sorghum met... 80 9e-013
gb|CW025295.1|CW025295 104_226_10488107_114_30497 Sorghum m... 78 4e-012
gb|CW130478.1|CW130478 104_513_11115136_116_34781_064 Sorgh... 78 4e-012
gb|CW498599.1|CW498599 fsbb001f291o14f0 Sorghum methylation... 78 4e-012
gb|CD204160.1|CD204160 HS1_4_A06.b1_A012 Heat-shocked seedl... 78 4e-012
gb|CD204280.1|CD204280 HS1_7_F03.b1_A012 Heat-shocked seedl... 78 4e-012
gb|CF770834.1|CF770834 DSBF1_10_C07.g1_A010 Drought-stresse... 78 4e-012
gb|CX607759.1|CX607759 ANR1_30_C08.g1_A002 Anaerobic roots ... 78 4e-012
gb|BH245821.1|BH245821 pSB1394.2 S. bicolor BTx623 PstI-dig... 76 1e-011
gb|CL159655.1|CL159655 104_349_10804417_114_31381_241 Sorgh... 76 1e-011
gb|CW070614.1|CW070614 104_321_10526871_5_30098 Sorghum met... 76 1e-011
gb|CW130479.1|CW130479 104_513_11115136_148_34777_064 Sorgh... 76 1e-011
gb|CW370574.1|CW370574 fsbb001f045j06f0 Sorghum methylation... 76 1e-011
gb|CW498600.1|CW498600 fsbb001f291o14k0 Sorghum methylation... 76 1e-011
gb|CF489464.1|CF489464 POL1_57_F01.g1_A002 Pollen Sorghum b... 76 1e-011
gb|CW051351.1|CW051351 104_291_10515200_115_30196 Sorghum m... 74 6e-011
gb|CL172973.1|CL172973 104_376_10890553_116_31795_073 Sorgh... 72 2e-010
gb|CL172974.1|CL172974 104_376_10890553_148_31794_073 Sorgh... 72 2e-010
gb|CL176293.1|CL176293 104_382_10893039_116_31763_255 Sorgh... 72 2e-010
gb|CL176294.1|CL176294 104_382_10893039_148_31762_255 Sorgh... 72 2e-010
gb|CW163223.1|CW163223 104_570_11151351_116_36449_052 Sorgh... 72 2e-010
gb|CW174586.1|CW174586 104_586_11157486_116_36565_019 Sorgh... 72 2e-010
gb|CW198339.1|CW198339 104_623_11182923_148_37057_016 Sorgh... 72 2e-010
gb|CW305209.1|CW305209 104_790_11466195_116_35700_008 Sorgh... 72 2e-010
gb|CF483429.1|CF483429 POL1_22_E10.b1_A002 Pollen Sorghum b... 72 2e-010
gb|CW107381.1|CW107381 104_477_11096552_148_34471_022 Sorgh... 70 9e-010
gb|CW269966.1|CW269966 104_741_11402135_116_35322_090 Sorgh... 70 9e-010
gb|CW300032.1|CW300032 104_783_11463432_148_36247_092 Sorgh... 70 9e-010
gb|BE595751.1|BE595751 PI1_54_D08.g1_A002 Pathogen induced ... 70 9e-010
gb|BG465260.1|BG465260 EM1_74_A05.g1_A002 Embryo 1 (EM1) So... 70 9e-010
gb|CD222171.1|CD222171 CCC1_2_E04.b1_A007 Callus culture/ce... 70 9e-010
gb|CD222173.1|CD222173 CCC1_2_D02.b1_A007 Callus culture/ce... 70 9e-010
gb|CD227690.1|CD227690 CCC1_53_F01.b1_A007 Callus culture/c... 70 9e-010
gb|CD227870.1|CD227870 CCC1_56_A03.b1_A007 Callus culture/c... 70 9e-010
gb|CF071235.1|CF071235 FE1_16_A06.b1_A002 Iron-deficient se... 70 9e-010
gb|CN135656.1|CN135656 OX1_38_E07.b1_A002 Oxidatively-stres... 70 9e-010
gb|CX607675.1|CX607675 ANR1_30_C08.b1_A002 Anaerobic roots ... 70 9e-010
gb|CX618736.1|CX618736 GABR1_41_H05.b1_A002 GA- or brassino... 70 9e-010
gb|BZ781398.1|BZ781398 ii28f12.g1 WGS-SbicolorF (DH5a methy... 68 3e-009
gb|CW172359.1|CW172359 104_583_11156250_116_36540_071 Sorgh... 66 1e-008
gb|CW176524.1|CW176524 104_589_11158533_148_36583_087 Sorgh... 66 1e-008
gb|CW221655.1|CW221655 104_656_11198025_148_37167_033 Sorgh... 66 1e-008
gb|CB925835.1|CB925835 ABA1_23_E07.g1_A012 Abscisic acid-tr... 66 1e-008
gb|CD226421.1|CD226421 CCC1_45_B12.g1_A007 Callus culture/c... 66 1e-008
gb|CD425117.1|CD425117 SA1_10_D06.g1_A002 Salicylic acid-tr... 66 1e-008
gb|CF073131.1|CF073131 FE1_28_G09.b1_A002 Iron-deficient se... 66 1e-008
gb|CN132843.1|CN132843 OX1_8_C05.g1_A002 Oxidatively-stress... 66 1e-008
gb|CX615540.1|CX615540 GABR1_20_F03.g1_A002 GA- or brassino... 66 1e-008
gb|CW200491.1|CW200491 104_626_11184087_116_36869_064 Sorgh... 64 5e-008
gb|CW257600.1|CW257600 104_723_11227424_148_35157_030 Sorgh... 64 5e-008
gb|CW394783.1|CW394783 fsbb001f082i17k0 Sorghum methylation... 64 5e-008
gb|CW479546.1|CW479546 fsbb001f238c01k0 Sorghum methylation... 64 5e-008
gb|CD228008.1|CD228008 CCC1_5_A09.b1_A007 Callus culture/ce... 62 2e-007
gb|CL196964.1|CL196964 104_423_10943421_114_32327_087 Sorgh... 60 8e-007
gb|CW024038.1|CW024038 104_164_10434722_1_30002 Sorghum met... 60 8e-007
gb|CW084528.1|CW084528 104_427_10945847_116_32509_090 Sorgh... 60 8e-007
gb|CW157593.1|CW157593 104_561_11147606_116_36394_063 Sorgh... 60 8e-007
gb|CW200492.1|CW200492 104_626_11184087_148_36870_064 Sorgh... 60 8e-007
gb|CW342649.1|CW342649 104_844_11486992_116_36176_054 Sorgh... 60 8e-007
gb|CW342650.1|CW342650 104_844_11486992_148_36175_054 Sorgh... 60 8e-007
gb|CW384314.1|CW384314 fsbb001f067e16k0 Sorghum methylation... 60 8e-007
gb|CW423655.1|CW423655 fsbb001f133j04f0 Sorghum methylation... 60 8e-007
gb|CW451016.1|CW451016 fsbb001f189o15f0 Sorghum methylation... 60 8e-007
gb|CD220374.1|CD220374 CCC1_66_C08.g1_A007 Callus culture/c... 58 3e-006
gb|CX616053.1|CX616053 GABR1_25_C07.g1_A002 GA- or brassino... 58 3e-006
gb|CW298322.1|CW298322 104_780_11462518_148_35651_081 Sorgh... 56 1e-005
gb|CW352129.1|CW352129 fsbb001f014e01f0 Sorghum methylation... 56 1e-005
gb|CW492384.1|CW492384 fsbb001f282k08f0 Sorghum methylation... 54 5e-005
gb|BE361549.1|BE361549 DG1_81_H04.b1_A002 Dark Grown 1 (DG1... 54 5e-005
gb|BG559635.1|BG559635 RHIZ2_71_F04.g1_A003 Rhizome2 (RHIZ2... 54 5e-005
gb|CW046110.1|CW046110 104_283_10509970_114_30137 Sorghum m... 52 2e-004
gb|CW367113.1|CW367113 fsbb001f040g23f0 Sorghum methylation... 52 2e-004
gb|BZ349897.1|BZ349897 hr47a12.g1 WGS-SbicolorF (JM107 adap... 48 0.003
gb|CL151746.1|CL151746 104_334_10779469_114_31361_253 Sorgh... 48 0.003
gb|CL151747.1|CL151747 104_334_10779469_116_31362_253 Sorgh... 48 0.003
gb|CL165107.1|CL165107 104_359_10808361_114_31816_345 Sorgh... 48 0.003
gb|CW025299.1|CW025299 104_226_10488109_116_30526 Sorghum m... 48 0.003
gb|CW294614.1|CW294614 104_775_11415280_148_35609_054 Sorgh... 48 0.003
gb|CW473333.1|CW473333 fsbb001f228k15k0 Sorghum methylation... 48 0.003
gb|AI724130.1|AI724130 RHIZ1_7_B04.y2_A001 Rhizome1 (RHIZ1)... 48 0.003
gb|BF422253.1|BF422253 FM1_13_B02.b1_A003 Floral-Induced Me... 48 0.003
gb|BG558451.1|BG558451 RHIZ2_67_F11.b1_A003 Rhizome2 (RHIZ2... 48 0.003
gb|CF480707.1|CF480707 POL1_67_A02.g1_A002 Pollen Sorghum b... 48 0.003
gb|CW108548.1|CW108548 104_480_11097587_116_34495_044 Sorgh... 46 0.013
gb|CW108549.1|CW108549 104_480_11097587_148_34499_044 Sorgh... 46 0.013
gb|CW117841.1|CW117841 104_494_11107877_116_34682_029 Sorgh... 46 0.013
gb|CW162181.1|CW162181 104_569_11150809_116_36440_009 Sorgh... 46 0.013
gb|CW162182.1|CW162182 104_569_11150809_148_36439_009 Sorgh... 46 0.013
gb|CW162685.1|CW162685 104_570_11151068_116_36452_080 Sorgh... 46 0.013
gb|CW169907.1|CW169907 104_580_11154918_148_36511_029 Sorgh... 46 0.013
gb|CW257599.1|CW257599 104_723_11227424_116_35161_030 Sorgh... 46 0.013
gb|CW273339.1|CW273339 104_745_11403844_148_35359_002 Sorgh... 46 0.013
gb|CW273340.1|CW273340 104_745_11403844_148_35717_002 Sorgh... 46 0.013
gb|CW274995.1|CW274995 104_748_11404723_148_35382_078 Sorgh... 46 0.013
gb|CW311562.1|CW311562 104_801_11470297_116_36281_013 Sorgh... 46 0.013
gb|CW407993.1|CW407993 fsbb001f101l05f0 Sorghum methylation... 46 0.013
gb|CW453451.1|CW453451 fsbb001f197h09f0 Sorghum methylation... 46 0.013
gb|CW476975.1|CW476975 fsbb001f234b10f0 Sorghum methylation... 46 0.013
gb|CW494425.1|CW494425 fsbb001f285l05k0 Sorghum methylation... 46 0.013
gb|AW286079.2|AW286079 LG1_261_B06.b1_A002 Light Grown 1 (L... 46 0.013
gb|CW068267.1|CW068267 104_317_10525032_115_30116 Sorghum m... 44 0.050
gb|CW221654.1|CW221654 104_656_11198025_116_37168_033 Sorgh... 44 0.050
gb|CW449283.1|CW449283 fsbb001f183f13k0 Sorghum methylation... 44 0.050
gb|CL181180.1|CL181180 104_391_10896560_148_31927_320 Sorgh... 42 0.20
gb|CW042089.1|CW042089 104_275_10506931_115_30285 Sorghum m... 42 0.20
gb|CW056289.1|CW056289 104_298_10517604_114_30156 Sorghum m... 42 0.20
gb|CW262446.1|CW262446 104_730_11230070_116_35227_063 Sorgh... 42 0.20
gb|CW311563.1|CW311563 104_801_11470297_148_36282_013 Sorgh... 42 0.20
>gb|CX611907.1|CX611907 ANR1_27_H10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H10_A002 3', mRNA sequence
Length = 834
Score = 842 bits (425), Expect = 0.0
Identities = 640/713 (89%), Gaps = 9/713 (1%)
Strand = Plus / Plus
Query: 1102 gccaaaggctgggctggaatccaggccattccaaggacggtgtggctggaccccagcggg 1161
|||||||| ||||| || || ||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2 gccaaagggtgggccgggattcaggcgattccgaggacggtgtggctggaccccagcggg 61
Query: 1162 aagcagctgttgcagtggcctatcgaggaggtggaggcgctgagagcaaagtcggtcact 1221
||||||||| |||||||||| |||||||||| |||||||| |||| ||| ||||||||
Sbjct: 62 aagcagctgctgcagtggcccgtcgaggaggtagaggcgctcagaggcaaggcggtcact 121
Query: 1222 ctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgaccgggatacagacggca 1281
||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||
Sbjct: 122 ctcaagaacagggtaatcaagccaggacagcacgtcgaggtgaccgggatacaaacagca 181
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
|||||||||||||||||||||||||||| |||||||||||||||||| || || ||| |
Sbjct: 182 caggctgacgtggaggtgagcttcgaggcgtcgccgtcggccctggcgggagcggagcgg 241
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 242 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 301
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 302 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagaga 361
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccgg---------cgacaagcccgtg 1512
||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 362 accgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaacaagcccgtc 421
Query: 1513 gtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtaccgcccgaca 1572
|||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||
Sbjct: 422 gtgctcatgtgcaccgaccctaccaagtcgtctctgaacccaaacctgtaccgcccgaca 481
Query: 1573 tttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgagaagcctgatc 1632
||||| || ||||| ||||||||||| || || || |||||||| ||||||||| |||||
Sbjct: 482 tttgccggttttgttgacacggacatttcaaatgggaagatatcgctgagaagcttgatc 541
Query: 1633 gaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccagggtc 1692
||||| ||||| || |||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 542 gaccgctcggtggtggagagctttggagccgggggcaagacgtgcatcctgtccagggtc 601
Query: 1693 tacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggagggcg 1752
||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 602 tacccgtcgctcgccatcggcaacaacgcgcgcctctacgtgttcaacaacgggaaggcg 661
Query: 1753 cacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaa 1805
|||||| ||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 662 gacgtcagggtgtcccgtctcactgcatgggagatgaagaagccactcatgaa 714
>gb|CL159656.1|CL159656 104_349_10804417_116_31382_241 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804417, DNA
sequence
Length = 659
Score = 577 bits (291), Expect = e-162
Identities = 422/467 (90%), Gaps = 9/467 (1%)
Strand = Plus / Minus
Query: 828 gcgcgcggggctcgagacgtccgtgccgcccggcccaagggtgaagcacgtgctcaagaa 887
||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 544 gcgcgtggggctcgagacgtccgtgccgtcgggcgcaagggtgaagcacgtgctcaagaa 485
Query: 888 cagcctcgacctccggcggtacgactactacaccgtgggcacgtaccacccgagggccga 947
|||||||||||| ||||||||||||||||||||||| ||||||||| ||| | |||||
Sbjct: 484 cagcctcgacctgcggcggtacgactactacaccgtcggcacgtacgaccgggacgccga 425
Query: 948 gcggtacgtgccggacgaccccgccggcgacga---------gcaccgcctgcgctacga 998
||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 424 gcggtacgtgccggacgaccccgccggcgacgacgacggcgagcgccgcctgcggtacga 365
Query: 999 ctacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcatcct 1058
|||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 364 ctacggcaacttctacgcgtccaagacgttctacgacccggcgaagcggcggcggatcct 305
Query: 1059 gtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggctgg 1118
|||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 304 gtggggctgggccaacgagtccgacaccgccgccgacgatgtcgccaaagggtgggccgg 245
Query: 1119 aatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtg 1178
|| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 244 gattcaggcgattccgaggacggtgtggctggaccccagcgggaagcagctgctgcagtg 185
Query: 1179 gcctatcgaggaggtggaggcgctgagagcaaagtcggtcactctcaagaacagggtaat 1238
||| |||||||||| |||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 184 gcccgtcgaggaggtagaggcgctcagaggcaaggcggtcactctcaagaacagggtaat 125
Query: 1239 caaggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|||| ||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 124 caagccaggacagcacgtcgaggtgaccgggatacaaacagcacagg 78
Score = 137 bits (69), Expect = 5e-030
Identities = 87/93 (93%)
Strand = Plus / Minus
Query: 722 gccgcgacttccggcggtggaggcgggtgcggcggccgctgcactcggcgcccacgggga 781
||||||||||| ||||||||| |||||| ||||||||||||||||||||| | |||||||
Sbjct: 659 gccgcgacttcaggcggtggacgcgggtccggcggccgctgcactcggcggcgacgggga 600
Query: 782 tgtgggagtgccccgacttctacccggtgagca 814
||||||||||||| |||||||||||||||||||
Sbjct: 599 tgtgggagtgcccggacttctacccggtgagca 567
>gb|CW276976.1|CW276976 104_750_11405776_148_35399_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 530
Score = 577 bits (291), Expect = e-162
Identities = 422/467 (90%), Gaps = 9/467 (1%)
Strand = Plus / Minus
Query: 828 gcgcgcggggctcgagacgtccgtgccgcccggcccaagggtgaagcacgtgctcaagaa 887
||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 480 gcgcgtggggctcgagacgtccgtgccgtcgggcgcaagggtgaagcacgtgctcaagaa 421
Query: 888 cagcctcgacctccggcggtacgactactacaccgtgggcacgtaccacccgagggccga 947
|||||||||||| ||||||||||||||||||||||| ||||||||| ||| | |||||
Sbjct: 420 cagcctcgacctgcggcggtacgactactacaccgtcggcacgtacgaccgggacgccga 361
Query: 948 gcggtacgtgccggacgaccccgccggcgacga---------gcaccgcctgcgctacga 998
||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 360 gcggtacgtgccggacgaccccgccggcgacgacgacggcgagcgccgcctgcggtacga 301
Query: 999 ctacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcatcct 1058
|||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 300 ctacggcaacttctacgcgtccaagacgttctacgacccggcgaagcggcggcggatcct 241
Query: 1059 gtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggctgg 1118
|||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 240 gtggggctgggccaacgagtccgacaccgccgccgacgatgtcgccaaagggtgggccgg 181
Query: 1119 aatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtg 1178
|| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 gattcaggcgattccgaggacggtgtggctggaccccagcgggaagcagctgctgcagtg 121
Query: 1179 gcctatcgaggaggtggaggcgctgagagcaaagtcggtcactctcaagaacagggtaat 1238
||| |||||||||| |||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 120 gcccgtcgaggaggtagaggcgctcagaggcaaggcggtcactctcaagaacagggtaat 61
Query: 1239 caaggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|||| ||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 60 caagccaggacagcacgtcgaggtgaccgggatacaaacagcacagg 14
Score = 48.1 bits (24), Expect = 0.003
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 787 gagtgccccgacttctacccggtgagca 814
|||||||| |||||||||||||||||||
Sbjct: 530 gagtgcccggacttctacccggtgagca 503
>gb|CW439175.1|CW439175 fsbb001f157d01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f157d01, DNA
sequence
Length = 456
Score = 418 bits (211), Expect = e-115
Identities = 336/379 (88%), Gaps = 9/379 (2%)
Strand = Plus / Minus
Query: 916 tacaccgtgggcacgtaccacccgagggccgagcggtacgtgccggacgaccccgccggc 975
|||||||| ||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct: 456 tacaccgtcggcacgtacgaccgggacgccgagcggtacgtgccggacgaccccgccggc 397
Query: 976 gacga---------gcaccgcctgcgctacgactacggcaacttctacgcgtccaagacg 1026
||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 gacgacgacggcgagcgccgcctgcggtacgactacggcaacttctacgcgtccaagacg 337
Query: 1027 ttctacgacccggccaagcggcgccgcatcctgtggggctgggctaacgagtccgacacc 1086
|||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 336 ttctacgacccggcgaagcggcggcggatcctgtggggctgggccaacgagtccgacacc 277
Query: 1087 gccgccgacgatgtggccaaaggctgggctggaatccaggccattccaaggacggtgtgg 1146
|||||||||||||| |||||||| ||||| || || |||| | | | ||||||||||||
Sbjct: 276 gccgccgacgatgtcgccaaagggtgggccgggattcaggagaatacgaggacggtgtgg 217
Query: 1147 ctggaccccagcgggaagcagctgttgcagtggcctatcgaggaggtggaggcgctgaga 1206
|||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||
Sbjct: 216 ctggaccccagcgggaagcagctgctgcagtggcccgtcgaggaggtagaggcgctcaga 157
Query: 1207 gcaaagtcggtcactctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgacc 1266
| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 156 ggcaaggcggtcactctcaagaacagggtaatcaagccaggacagcacgtcgaggtgacc 97
Query: 1267 gggatacagacggcacagg 1285
|||||||| || |||||||
Sbjct: 96 gggatacaaacagcacagg 78
>gb|CW033209.1|CW033209 104_262_10501822_115_30362 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501822, DNA
sequence
Length = 424
Score = 398 bits (201), Expect = e-109
Identities = 299/333 (89%), Gaps = 9/333 (2%)
Strand = Plus / Plus
Query: 828 gcgcgcggggctcgagacgtccgtgccgcccggcccaagggtgaagcacgtgctcaagaa 887
||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 92 gcgcgtggggctcgagacgtccgtgccgtcgggcgcaagggtgaagcacgtgctcaagaa 151
Query: 888 cagcctcgacctccggcggtacgactactacaccgtgggcacgtaccacccgagggccga 947
|||||||||||| ||||||||||||||||||||||| ||||||||| ||| | |||||
Sbjct: 152 cagcctcgacctgcggcggtacgactactacaccgtcggcacgtacgaccgggacgccga 211
Query: 948 gcggtacgtgccggacgaccccgccggcgacga---------gcaccgcctgcgctacga 998
||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 212 gcggtacgtgccggacgaccccgccggcgacgacgacggcgagcgccgcctgcggtacga 271
Query: 999 ctacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcatcct 1058
|||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 272 ctacggcaacttctacgcgtccaagacgttctacgacccggcgaagcggcggcggatcct 331
Query: 1059 gtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggctgg 1118
|||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 332 gtggggctgggccaacgagtccgacaccgccgccgacgatgtcgccaaagggtgggccgt 391
Query: 1119 aatccaggccattccaaggacggtgtggctgga 1151
|| ||||| ||||| |||||||||||||||||
Sbjct: 392 gattcaggcgattccgaggacggtgtggctgga 424
Score = 91.7 bits (46), Expect = 2e-016
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgacttctacccggtgagca 814
||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||
Sbjct: 12 ccgctgcactcggcggcgacggggatgtgggagtgcccggacttctacccggtgagca 69
>gb|CW457841.1|CW457841 fsbb001f203n07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203n07, DNA
sequence
Length = 700
Score = 349 bits (176), Expect = 6e-094
Identities = 330/379 (87%), Gaps = 3/379 (0%)
Strand = Plus / Minus
Query: 254 tgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggg 313
|||||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||
Sbjct: 379 tgtactacaaggggtggtaccacatcttctaccaatacaaccccaaaggcgccgtgtggg 320
Query: 314 gcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagc 373
||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 319 gcaacatcgtgtggggccactcggtgtcgcgagacctcatcaactgggtggccctgaagc 260
Query: 374 cggcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcggcgacgg 433
||||| || || ||||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 259 cggcgatcgagcccagcatcccgtccgacaagtacggctgctggtcagggtcggcgacca 200
Query: 434 tgctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccggacatca 493
||| ||||||||| || |||| ||||||||||||||||||| ||| || ||| | |
Sbjct: 199 cgctccccgacggc-acg--ccggcgatcatgtacacgggcgtgaaccgtcccgacgtga 143
Query: 494 actaccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagt 553
|||||||||| |||||| | |||||||| |||| |||||||||||||||||||||||
Sbjct: 142 actaccaggtgcagaacatcgcgtaccctcggaacaagtcggacccgctgctccgggagt 83
Query: 554 gggtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcgacgcagt 613
|||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||
Sbjct: 82 gggtgaagccctcgcacaacccgatcatcgtccccaaggccggcgtcaacgcgacgcagt 23
Query: 614 tccgcgacccgaccacggc 632
|||| ||||| ||||||||
Sbjct: 22 tccgggaccccaccacggc 4
>gb|CW276975.1|CW276975 104_750_11405776_116_35395_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405776, DNA
sequence
Length = 599
Score = 345 bits (174), Expect = 1e-092
Identities = 334/385 (86%), Gaps = 3/385 (0%)
Strand = Plus / Plus
Query: 256 tactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggc 315
|||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 57 tactacaaggggtggtaccatttcttctaccagtacaaccccaaaggcgctgtatggggc 116
Query: 316 aacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagccg 375
|||||||| |||||||||||||| || || ||||||||||||||| |||| ||||||||
Sbjct: 117 aacatcgtatgggcgcactcggtctcacgcgacctcatcaactggatggcattagagccg 176
Query: 376 gcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcggcgacggtg 435
||| ||| || |||||||| ||||| ||||||||||||||| || |||||||||
Sbjct: 177 gcgatcaagcccagcatcccctccgacaagtacggctgctggtcgggctcggcgacgacc 236
Query: 436 ctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccggacatcaac 495
||||||||||| || ||||||||||||||||| ||| | |||| ||| ||| ||||
Sbjct: 237 atgcccgacggca-cg--ccggtgatcatgtacaccggcatcgaccgccccaacaccaac 293
Query: 496 taccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtgg 555
||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||||
Sbjct: 294 taccaggtccagaacgtcgcctaccctcggaacaagtccgacccgctgctccgggagtgg 353
Query: 556 gtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcgacgcagttc 615
|||||||| || ||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct: 354 gtgaagccgtcctacaacccggtcatcgtgccggaaggcggcatcaacgcgacgcagttc 413
Query: 616 cgcgacccgaccacggcctggcgcg 640
|||||||||||||||||||||||||
Sbjct: 414 cgcgacccgaccacggcctggcgcg 438
Score = 111 bits (56), Expect = 3e-022
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 692 cgccccgcggcgtggcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgc 751
||||||| ||||||||||| |||||||| |||||||||||| ||||||||| |||||| |
Sbjct: 517 cgccccggggcgtggcgtatgtgtaccggagccgcgacttcaggcggtggacgcgggtcc 576
Query: 752 ggcggccgctgcactcggcg 771
||||||||||||||||||||
Sbjct: 577 ggcggccgctgcactcggcg 596
>gb|CW262736.1|CW262736 104_730_11230244_116_35224_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230244, DNA
sequence
Length = 654
Score = 341 bits (172), Expect = 2e-091
Identities = 243/268 (90%), Gaps = 9/268 (3%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 301 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 360
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 361 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 420
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 421 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagaga 480
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccgg---------cgacaagcccgtg 1512
||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 481 accgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaacaagcccgtc 540
Query: 1513 gtgctcatgtgcaccgaccctaccaagt 1540
||||||||||||||||||||||||||||
Sbjct: 541 gtgctcatgtgcaccgaccctaccaagt 568
>gb|CW262737.1|CW262737 104_730_11230244_148_35220_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230244, DNA
sequence
Length = 638
Score = 341 bits (172), Expect = 2e-091
Identities = 243/268 (90%), Gaps = 9/268 (3%)
Strand = Plus / Minus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 518 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 459
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 458 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 399
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 398 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagaga 339
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccgg---------cgacaagcccgtg 1512
||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 338 accgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaacaagcccgtc 279
Query: 1513 gtgctcatgtgcaccgaccctaccaagt 1540
||||||||||||||||||||||||||||
Sbjct: 278 gtgctcatgtgcaccgaccctaccaagt 251
Score = 87.7 bits (44), Expect = 4e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 1539 gtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacat 1598
|||||| | |||||| ||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 155 gtcgtctctgaacccaaacctgtaccgcccgacatttgccggttttgttgacacggacat 96
Query: 1599 ctcgaacggcaagatatccctgagaagc 1626
|| || || |||||||| |||||||||
Sbjct: 95 ttcaaatgggaagatatcgctgagaagc 68
>gb|CW400388.1|CW400388 fsbb001f090k19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090k19, DNA
sequence
Length = 663
Score = 341 bits (172), Expect = 2e-091
Identities = 243/268 (90%), Gaps = 9/268 (3%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 252 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 311
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 312 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 371
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 372 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagaga 431
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccgg---------cgacaagcccgtg 1512
||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 432 accgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaacaagcccgtc 491
Query: 1513 gtgctcatgtgcaccgaccctaccaagt 1540
||||||||||||||||||||||||||||
Sbjct: 492 gtgctcatgtgcaccgaccctaccaagt 519
Score = 56.0 bits (28), Expect = 1e-005
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1539 gtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgt 1586
|||||| | |||||| ||||||||||||||||||||||| || |||||
Sbjct: 615 gtcgtctctgaacccaaacctgtaccgcccgacatttgccggttttgt 662
>gb|CW457045.1|CW457045 fsbb001f202l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202l01, DNA
sequence
Length = 288
Score = 337 bits (170), Expect = 2e-090
Identities = 241/265 (90%), Gaps = 6/265 (2%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 6 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 65
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 66 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 125
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 126 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagagg 185
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccg------gcgacaagcccgtggtg 1515
||||||||||||||||||||||||||| ||||||||| || |||||| ||| |||
Sbjct: 186 accgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaagcacgtcgtg 245
Query: 1516 ctcatgtgcaccgaccctaccaagt 1540
|||||||||||||||||||||||||
Sbjct: 246 ctcatgtgcaccgaccctaccaagt 270
>gb|CW449570.1|CW449570 fsbb001f183m13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f183m13, DNA
sequence
Length = 602
Score = 317 bits (160), Expect = 2e-084
Identities = 323/375 (86%), Gaps = 3/375 (0%)
Strand = Plus / Plus
Query: 256 tactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggc 315
|||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 231 tactacaaggggtggtaccatttcttctaccagtacaaccccaaaggcgctgtatggggc 290
Query: 316 aacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagccg 375
|||||||| |||||||||||||| || || ||||||||||||||| |||| ||||||||
Sbjct: 291 aacatcgtatgggcgcactcggtctcacgcgacctcatcaactggatggcattagagccg 350
Query: 376 gcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcggcgacggtg 435
||| ||| || |||||||| ||||| ||||||||||||||| || |||||||||
Sbjct: 351 gcgatcaagcccagcatcccctccgacaagtacggctgctggtcgggctcggcgacgacc 410
Query: 436 ctgcccgacggcggcggcccggtgatcatgtacacgggcgtggaccacccggacatcaac 495
||||||||||| || ||||||||||||||||| ||| | |||| ||| ||| ||||
Sbjct: 411 atgcccgacggc-acg--ccggtgatcatgtacaccggcatcgaccgccccaacaccaac 467
Query: 496 taccaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtgg 555
||||||||||||||||| || ||||| |||| ||| ||||||||||||||||||||
Sbjct: 468 taccaggtccagaacgtcgcctaccctcggaacaagtccgacccgctgctccgggagtgt 527
Query: 556 gtgaagccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcgacgcagttc 615
|||||||| || ||||||| |||||||| || || ||||||||||||||||||||||||
Sbjct: 528 gtgaagccgtcctacaacccggtcatcgtgccggaaggcggcatcaacgcgacgcagttc 587
Query: 616 cgcgacccgaccacg 630
|||||||||||||||
Sbjct: 588 cgcgacccgaccacg 602
>gb|CW469126.1|CW469126 fsbb001f221l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221l01, DNA
sequence
Length = 270
Score = 315 bits (159), Expect = 9e-084
Identities = 204/219 (93%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 18 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 77
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 78 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 137
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagaga 1461
| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 138 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaaggagagg 197
Query: 1462 accgcggtgttcttcagggtgttcaagcccgccgccggc 1500
||||||||||||||||||||||||||| |||||||||||
Sbjct: 198 accgcggtgttcttcagggtgttcaaggccgccgccggc 236
>gb|CW498973.1|CW498973 fsbb001f293i01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i01, DNA
sequence
Length = 595
Score = 281 bits (142), Expect = 1e-073
Identities = 213/237 (89%), Gaps = 6/237 (2%)
Strand = Plus / Plus
Query: 1310 tgtcgccgtcggccctggccggtgccgagacgctggacccggcgctggcctacgacgcgg 1369
||||||||||||||||||| || || ||| ||||||||||||||| ||| ||||||| |
Sbjct: 1 tgtcgccgtcggccctggcgggagcggagcggctggacccggcgctcgccgacgacgccg 60
Query: 1370 agaggctgtgcggcgtgaagcgcgcggacgtgaggggcggcgtggggccgttcgggctgt 1429
|||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||
Sbjct: 61 agaggctgtgcggcgtcaagcgcgccgacgtgaagggcggcgtgggtccgttcgggctgt 120
Query: 1430 gggtgctggcctccgccaaccgcaaggagagaaccgcggtgttcttcagggtgttcaagc 1489
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 121 gggtgctggcctccgccaacctcaaggagaggaccgcggtgttcttcagggtgttcaagg 180
Query: 1490 ccgccgccg------gcgacaagcccgtggtgctcatgtgcaccgaccctaccaagt 1540
||||||||| || |||||| ||| ||||||||||||||||||||||||||||
Sbjct: 181 ccgccgccggcagcagcaacaagcacgtcgtgctcatgtgcaccgaccctaccaagt 237
Score = 83.8 bits (42), Expect = 6e-014
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1539 gtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacat 1598
|||||| | |||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 419 gtcgtctctgaacccaaacctgtaccgcccgacgtttgcaggttttgttgacacggacat 478
Query: 1599 ctcgaacggcaagatatccctgagaa 1624
|| || || |||||||| |||||||
Sbjct: 479 ttcaaatgggaagatatcgctgagaa 504
>gb|CW050896.1|CW050896 104_291_10514924_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514924, DNA
sequence
Length = 308
Score = 256 bits (129), Expect = 7e-066
Identities = 174/189 (92%)
Strand = Plus / Plus
Query: 875 acgtgctcaagaacagcctcgacctccggcggtacgactactacaccgtgggcacgtacc 934
||||||| ||||||||||| ||||| ||||||||||||||||||||| | |||||||||
Sbjct: 120 acgtgctgaagaacagcctggacctgcggcggtacgactactacaccatcggcacgtacg 179
Query: 935 acccgagggccgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgct 994
||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||| |
Sbjct: 180 acccggcggcggagcggtacgtgccggacgaccccgccggcgacgagcgccacctgcggt 239
Query: 995 acgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgca 1054
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 240 acgactacggcaacttctacgcgtccaagacgttctacgacccggcgaagcggcggcgga 299
Query: 1055 tcctgtggg 1063
|||||||||
Sbjct: 300 tcctgtggg 308
Score = 54.0 bits (27), Expect = 5e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 777 ggggatgtgggagtgccccgacttctacccg 807
|||||||||||||||||| ||||||||||||
Sbjct: 1 ggggatgtgggagtgcccggacttctacccg 31
>gb|CL181798.1|CL181798 104_392_10896983_148_31925_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896983, DNA
sequence
Length = 684
Score = 248 bits (125), Expect = 2e-063
Identities = 164/177 (92%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 277 gatcgaccggtcggttgttgagagctttggagccgggggcaagacgtgcatcctctccag 218
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 217 ggtctacccgtcgctcgccatcggcaagaacgcccgcctctacgtgttcaacaacgggaa 158
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaa 1805
|||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 157 ggcggacgtcaaggtgtccagtctcaccgcatgggagatgaagaagccactcatgaa 101
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 1550 acccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggca 1609
||||||||||||||| ||||| |||||||| ||||| | ||| ||||| || |||||||
Sbjct: 466 acccgaacctgtaccagccgacgtttgcaggttttgtggtcacagacatttctaacggca 407
Query: 1610 agatatccctgagaagc 1626
|||| || |||||||||
Sbjct: 406 agatctctctgagaagc 390
>gb|CW306883.1|CW306883 104_792_11467079_148_35713_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467079, DNA
sequence
Length = 624
Score = 248 bits (125), Expect = 2e-063
Identities = 164/177 (92%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 108 gatcgaccggtcggttgttgagagctttggagccgggggcaagacgtgcatcctctccag 167
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 168 ggtctacccgtcgctcgccatcggcaagaacgcccgcctctacgtgttcaacaacgggaa 227
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaa 1805
|||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 228 ggcggacgtcaaggtgtccagtctcaccgcatgggagatgaagaagccactcatgaa 284
>gb|CW156831.1|CW156831 104_560_11146901_148_36380_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146901, DNA
sequence
Length = 712
Score = 246 bits (124), Expect = 7e-063
Identities = 163/176 (92%)
Strand = Plus / Minus
Query: 1282 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggccggtgccgagacg 1341
||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |
Sbjct: 176 caggctgacgtggaggtgagcttcgaggtgtcgccgtcggccctggcgggagcggagcgg 117
Query: 1342 ctggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtg 1401
|||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 116 ctggacccggcgctcgccgacgacgccgagaggctgtgcggcgtcaagcgcgccgacgtg 57
Query: 1402 aggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaagga 1457
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56 aagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaagga 1
Score = 65.9 bits (33), Expect = 1e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 1237 atcaaggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
|||||| ||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 712 atcaagccaggacagcacgtcgaggtgaccgggatacaaacagcacagg 664
>gb|CW231621.1|CW231621 104_681_11211220_116_37346_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 633
Score = 230 bits (116), Expect = 4e-058
Identities = 167/184 (90%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 342 gatcgacaggtcggttgttgagagctttggagctggaggcaaaacgtgcatcctctccag 283
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 282 ggtgtacccgtcgcttgccatcggcaacaaggctcacctctacgtgttcaacaacgggag 223
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaacgg 1808
|||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 222 ggcggacgtcaaggtgtcccgtctcatcgcatgggagatgaagaagccggtcatgaacgg 163
Query: 1809 ggcc 1812
||||
Sbjct: 162 ggcc 159
Score = 83.8 bits (42), Expect = 6e-014
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 1539 gtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacat 1598
|||||| | |||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 532 gtcgtctctgaacccaaacctgtaccgcccgacgtttgcaggttttgttgacacggacat 473
Query: 1599 ctcgaacggcaagatatccctgagaa 1624
|| || || |||||||| |||||||
Sbjct: 472 ttcaaatgggaagatatcgctgagaa 447
>gb|CW231622.1|CW231622 104_681_11211220_148_37350_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211220, DNA
sequence
Length = 688
Score = 230 bits (116), Expect = 4e-058
Identities = 167/184 (90%)
Strand = Plus / Plus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 370 gatcgacaggtcggttgttgagagctttggagctggaggcaaaacgtgcatcctctccag 429
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 430 ggtgtacccgtcgcttgccatcggcaacaaggctcacctctacgtgttcaacaacgggag 489
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaacgg 1808
|||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 490 ggcggacgtcaaggtgtcccgtctcatcgcatgggagatgaagaagccggtcatgaacgg 549
Query: 1809 ggcc 1812
||||
Sbjct: 550 ggcc 553
Score = 83.8 bits (42), Expect = 6e-014
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1539 gtcgtcccagaacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacat 1598
|||||| | |||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 180 gtcgtctctgaacccaaacctgtaccgcccgacgtttgcaggttttgttgacacggacat 239
Query: 1599 ctcgaacggcaagatatccctgagaa 1624
|| || || |||||||| |||||||
Sbjct: 240 ttcaaatgggaagatatcgctgagaa 265
>gb|CW457046.1|CW457046 fsbb001f202l01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f202l01, DNA
sequence
Length = 775
Score = 230 bits (116), Expect = 4e-058
Identities = 167/184 (90%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 613 gatcgacaggtcggttgttgagagctttggagctggaggcaaaacgtgcatcctctccag 554
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 553 ggtgtacccgtcgcttgccatcggcaacaaggctcacctctacgtgttcaacaacgggag 494
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaacgg 1808
|||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 493 ggcggacgtcaaggtgtcccgtctcatcgcatgggagatgaagaagccggtcatgaacgg 434
Query: 1809 ggcc 1812
||||
Sbjct: 433 ggcc 430
>gb|CW498974.1|CW498974 fsbb001f293i01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f293i01, DNA
sequence
Length = 659
Score = 230 bits (116), Expect = 4e-058
Identities = 167/184 (90%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||| | ||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 527 gatcgacaggtcggttgttgagagctttggagctggaggcaaaacgtgcatcctctccag 468
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||| ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 467 ggtgtacccgtcgcttgccatcggcaacaaggctcacctctacgtgttcaacaacgggag 408
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaacgg 1808
|||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 407 ggcggacgtcaaggtgtcccgtctcatcgcatgggagatgaagaagccggtcatgaacgg 348
Query: 1809 ggcc 1812
||||
Sbjct: 347 ggcc 344
>gb|CW449571.1|CW449571 fsbb001f183m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f183m13, DNA
sequence
Length = 499
Score = 224 bits (113), Expect = 3e-056
Identities = 170/189 (89%)
Strand = Plus / Minus
Query: 1097 atgtggccaaaggctgggctggaatccaggccattccaaggacggtgtggctggacccca 1156
|||| |||||||| ||||| || || ||||| ||||| ||||||||||||||||||||||
Sbjct: 499 atgtcgccaaagggtgggccgggattcaggcgattccgaggacggtgtggctggacccca 440
Query: 1157 gcgggaagcagctgttgcagtggcctatcgaggaggtggaggcgctgagagcaaagtcgg 1216
|||||||||||||| |||||||||| |||||||||| |||||||| |||| ||| |||
Sbjct: 439 gcgggaagcagctgctgcagtggcccgtcgaggaggtagaggcgctcagaggcaaggcgg 380
Query: 1217 tcactctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgaccgggatacaga 1276
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
Sbjct: 379 tcactctcaagaacagggtaatcaagccaggacagcacgtcgaggtgaccgggatacaaa 320
Query: 1277 cggcacagg 1285
| |||||||
Sbjct: 319 cagcacagg 311
>gb|CW156830.1|CW156830 104_560_11146901_116_36379_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146901, DNA
sequence
Length = 693
Score = 218 bits (110), Expect = 2e-054
Identities = 176/198 (88%)
Strand = Plus / Plus
Query: 1088 ccgccgacgatgtggccaaaggctgggctggaatccaggccattccaaggacggtgtggc 1147
||||||||||||| ||| || | ||||| || || ||||| ||||| |||||||||||||
Sbjct: 1 ccgccgacgatgtcgcccaatggtgggccgggattcaggcgattccgaggacggtgtggc 60
Query: 1148 tggaccccagcgggaagcagctgttgcagtggcctatcgaggaggtggaggcgctgagag 1207
||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||
Sbjct: 61 tggaccccagcgggaagcagctgctgcagtggcccgtcgaggaggtagaggcgctcagag 120
Query: 1208 caaagtcggtcactctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgaccg 1267
||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||
Sbjct: 121 gcaaggcggtcactctcaagaacagggtaatcaagccaggacagcacgtctaggtgaccg 180
Query: 1268 ggatacagacggcacagg 1285
||||||| || |||||||
Sbjct: 181 ggatacaaacagcacagg 198
>gb|CW151042.1|CW151042 104_551_11143730_148_36309_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143730, DNA
sequence
Length = 554
Score = 216 bits (109), Expect = 6e-054
Identities = 160/177 (90%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 378 gatcgaccgctcggtggtggagagctttggagccgggggcaagacgtgcatcctgtccag 319
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 318 ggtctacccgtcgctcgccatcggcaacaacgcgcgcctctacgtgttcaacaacgggaa 259
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaa 1805
|||| |||||| ||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 258 ggcggacgtcagggtgtcccgtctcactgcatgggagatgaagaagccactcatgaa 202
Score = 83.8 bits (42), Expect = 6e-014
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 1549 aacccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggc 1608
||||| ||||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 554 aacccaaacctgtaccgcccgacatttgccggttttgttgacacggacatttcaaatggg 495
Query: 1609 aagatatccctgagaagc 1626
|||||||| |||||||||
Sbjct: 494 aagatatcgctgagaagc 477
>gb|CW400389.1|CW400389 fsbb001f090k19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f090k19, DNA
sequence
Length = 753
Score = 216 bits (109), Expect = 6e-054
Identities = 160/177 (90%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 628 gatcgaccgctcggtggtggagagctttggagccgggggcaagacgtgcatcctgtccag 569
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacgggag 1748
||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 568 ggtctacccgtcgctcgccatcggcaacaacgcgcgcctctacgtgttcaacaacgggaa 509
Query: 1749 ggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccggtcatgaa 1805
|||| |||||| ||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 508 ggcggacgtcagggtgtcccgtctcactgcatgggagatgaagaagccactcatgaa 452
>gb|CD227732.1|CD227732 CCC1_53_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_H10_A007 5', mRNA sequence
Length = 640
Score = 214 bits (108), Expect = 2e-053
Identities = 328/399 (82%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 186 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccaccaat 245
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 246 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 305
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 306 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 365
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 366 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 425
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 426 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 482
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 483 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 542
Query: 525 gaacgtgtcggacccgctgctccgggagtgggtgaagcc 563
||||| |||||||||||||||||||||||||| ||||||
Sbjct: 543 gaacgcgtcggacccgctgctccgggagtgggagaagcc 581
Score = 58.0 bits (29), Expect = 3e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 591 gggcggcatcaacgcgacgcagttccgcg 619
|||||||||||||||||||||||||||||
Sbjct: 612 gggcggcatcaacgcgacgcagttccgcg 640
>gb|CW065110.1|CW065110 104_311_10522954_115_30121 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522954, DNA
sequence
Length = 583
Score = 210 bits (106), Expect = 4e-052
Identities = 136/146 (93%)
Strand = Plus / Minus
Query: 1660 gccgggggcaagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggac 1719
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 583 gccgggggcaagacgtgcatcctctccagggtctacccgtcgctcgccatcggcaagaac 524
Query: 1720 gctcgcctctacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcg 1779
|| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 523 gcccgcctctacgtgttcaacaacgggaaggcggacgtcaaggtgtccagtctcaccgca 464
Query: 1780 tgggagatgaagaagccggtcatgaa 1805
||||||||||||||||| |||||||
Sbjct: 463 tgggagatgaagaagccactcatgaa 438
>gb|CD228117.1|CD228117 CCC1_5_A09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_A09_A007 5', mRNA sequence
Length = 608
Score = 210 bits (106), Expect = 4e-052
Identities = 320/389 (82%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 175 tccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaagaactggatc 234
||||| |||| ||||||||||||||| |||||||| |||||||| || | ||||||||||
Sbjct: 15 tccattgtcagccccctgctcaggacagggtaccatttccagccaccaatgaactggatc 74
Query: 235 aatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaat 294
|| || |||||||| || |||||||||||||| ||||| || | |||||||| |||||
Sbjct: 75 aacgaccccaacgctccgatgtactacaagggatggtatcacctgttctaccagtacaac 134
Query: 295 cccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatc 354
||||||||||| ||||||||||||||||||||||| ||||| | || || |||||||||
Sbjct: 135 cccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacgcgacctcatc 194
Query: 355 aactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacaggtacggctgc 414
|||||| | ||||| ||||| || || || |||||||| |||| ||||||||||
Sbjct: 195 aactggatcgcgctggagcccgccatctacccgagcatcccctccgaccagtacggctgc 254
Query: 415 tggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcatgtacacgggc 474
||||| || ||||||||| |||||| |||||| || |||| |||| | ||||| ||
Sbjct: 255 tggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcctctacactggg 311
Query: 475 gtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcg 534
| ||| ||||||||||||||||||||| ||| | || | ||| ||||||| ||||
Sbjct: 312 atcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaagaacgcgtcg 371
Query: 535 gacccgctgctccgggagtgggtgaagcc 563
|||||||||||||||||||||| ||||||
Sbjct: 372 gacccgctgctccgggagtgggagaagcc 400
Score = 75.8 bits (38), Expect = 1e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 591 gggcggcatcaacgcgacgcagttccgcgacccgaccacggc 632
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 gggcggcatcaacgcgacgcagttccgcgacccgacgacggc 472
>gb|CD222254.1|CD222254 CCC1_2_E04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E04_A007 5', mRNA sequence
Length = 626
Score = 206 bits (104), Expect = 6e-051
Identities = 327/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 183 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccaccaat 242
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 243 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 302
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| |||| |||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 303 ccagtacaaccccaggggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 362
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 363 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 422
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 423 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 479
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 480 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 539
Query: 525 gaacgtgtcggacccgctgctccgggagtgggtgaagcc 563
||||| |||||||||||||||||||||||||| ||||||
Sbjct: 540 gaacgcgtcggacccgctgctccgggagtgggagaagcc 578
>gb|CD227907.1|CD227907 CCC1_56_C12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_C12_A007 5', mRNA sequence
Length = 640
Score = 206 bits (104), Expect = 6e-051
Identities = 327/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 186 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccaccaat 245
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 246 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 305
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||| ||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 306 ccagtacaaccccgagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 365
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 366 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 425
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 426 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 482
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 483 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 542
Query: 525 gaacgtgtcggacccgctgctccgggagtgggtgaagcc 563
||||| |||||||||||||||||||||||||| ||||||
Sbjct: 543 gaacgcgtcggacccgctgctccgggagtgggagaagcc 581
Score = 58.0 bits (29), Expect = 3e-006
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 591 gggcggcatcaacgcgacgcagttccgcg 619
|||||||||||||||||||||||||||||
Sbjct: 612 gggcggcatcaacgcgacgcagttccgcg 640
>gb|CF074446.1|CF074446 FE1_24_E03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_E03_A002 5', mRNA sequence
Length = 643
Score = 206 bits (104), Expect = 6e-051
Identities = 327/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 191 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccgccaat 250
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 251 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 310
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 311 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 370
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 371 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 430
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 431 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 487
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 488 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 547
Query: 525 gaacgtgtcggacccgctgctccgggagtgggtgaagcc 563
||||| ||| |||||||||||||||||||||| ||||||
Sbjct: 548 gaacgcgtctgacccgctgctccgggagtgggagaagcc 586
Score = 54.0 bits (27), Expect = 5e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 591 gggcggcatcaacgcgacgcagttccg 617
|||||||||||||||||||||||||||
Sbjct: 617 gggcggcatcaacgcgacgcagttccg 643
>gb|CN127871.1|CN127871 RHOH1_25_C09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_25_C09_A002 5', mRNA sequence
Length = 744
Score = 206 bits (104), Expect = 6e-051
Identities = 327/399 (81%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 164 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccgccaat 223
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 224 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 283
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||| | || ||
Sbjct: 284 ccagtacaaccccaagggcgcagtatggggcaacatcatgtgggctcactccatatcacg 343
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 344 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 403
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 404 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 460
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 461 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 520
Query: 525 gaacgtgtcggacccgctgctccgggagtgggtgaagcc 563
||||| |||||||||||||||||||||||||| ||||||
Sbjct: 521 gaacgcgtcggacccgctgctccgggagtgggagaagcc 559
Score = 75.8 bits (38), Expect = 1e-011
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 591 gggcggcatcaacgcgacgcagttccgcgacccgaccacggc 632
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 590 gggcggcatcaacgcgacgcagttccgcgacccgacgacggc 631
>gb|CF071286.1|CF071286 FE1_16_A06.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_A06_A002 5', mRNA sequence
Length = 579
Score = 198 bits (100), Expect = 1e-048
Identities = 317/387 (81%), Gaps = 3/387 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 196 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccgccaat 255
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 256 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 315
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 316 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 375
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 376 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 435
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 436 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 492
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 493 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 552
Query: 525 gaacgtgtcggacccgctgctccggga 551
||||| |||||||||||||||||||||
Sbjct: 553 gaacgcgtcggacccgctgctccggga 579
>gb|CD204377.1|CD204377 HS1_7_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_7_F03_A012 5', mRNA sequence
Length = 602
Score = 196 bits (99), Expect = 6e-048
Identities = 316/386 (81%), Gaps = 3/386 (0%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 220 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccaccaat 279
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 280 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 339
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 340 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 399
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 400 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 459
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgcccgacggcggcggcccggtgatcat 464
||||||||||||||| || ||||||||| |||||| |||||| || |||| |||| |
Sbjct: 460 gtacggctgctggtcgggctcggcgacgatgctgcaagacggc-acg--ccggcgatcct 516
Query: 465 gtacacgggcgtggaccacccggacatcaactaccaggtccagaacgtggcgtacccgaa 524
||||| || | ||| ||||||||||||||||||||| ||| | || | ||| ||
Sbjct: 517 ctacactgggatcaaccgcccggacatcaactaccaggtgcaggtgctcgccttccccaa 576
Query: 525 gaacgtgtcggacccgctgctccggg 550
||||| ||||||||||||||||||||
Sbjct: 577 gaacgcgtcggacccgctgctccggg 602
>gb|CW022071.1|CW022071 104_161_10431625_1_30006 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10431625, DNA sequence
Length = 365
Score = 190 bits (96), Expect = 3e-046
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 1106 aaggctgggctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagc 1165
|||| ||||| || || ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 4 aagggtgggccgggattcaggcgattccgaggacggtgtggctggaccccagcgggaagc 63
Query: 1166 agctgttgcagtggcctatcgaggaggtggaggcgctgagagcaaagtcggtcactctca 1225
||||| ||||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 64 agctgctgcagtggcctatcgaggaggtggaggcgctcagaagcaaggcggtcactctcg 123
Query: 1226 agaacagggtaatcaaggcaggacatcacgtcgaggtgaccgggatacagacggcacagg 1285
||| | | ||||||||||||| || || ||| |||||||||||||||||||||||||||
Sbjct: 124 ggaagacgataatcaaggcagggcaccatgtcaaggtgaccgggatacagacggcacagg 183
>gb|CW022072.1|CW022072 104_161_10431625_5_30007 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10431625, DNA sequence
Length = 405
Score = 190 bits (96), Expect = 3e-046
Identities = 137/151 (90%), Gaps = 6/151 (3%)
Strand = Plus / Minus
Query: 1396 gacgtgaggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaag 1455
||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 404 gacgtgaagggcggcgtgggtccgttcgggctgtgggtgctggcctccgccaacctcaag 345
Query: 1456 gagagaaccgcggtgttcttcagggtgttcaagcccgccgccg------gcgacaagccc 1509
||||| ||||||||||||||||||||||||||| ||||||||| || |||||| |
Sbjct: 344 gagaggaccgcggtgttcttcagggtgttcaaggccgccgccggcagcagcaacaagcac 285
Query: 1510 gtggtgctcatgtgcaccgaccctaccaagt 1540
|| ||||||||||||||||||||||||||||
Sbjct: 284 gtcgtgctcatgtgcaccgaccctaccaagt 254
>gb|BG560224.1|BG560224 RHIZ2_71_F04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 494
Score = 188 bits (95), Expect = 1e-045
Identities = 230/275 (83%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 172 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccgccaat 231
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 232 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 291
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 292 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 351
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 352 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 411
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgc 439
||||||||||||||| || ||||||||| ||||||
Sbjct: 412 gtacggctgctggtcgggctcggcgacgatgctgc 446
>gb|CD222241.1|CD222241 CCC1_2_D02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D02_A007 5', mRNA sequence
Length = 534
Score = 188 bits (95), Expect = 1e-045
Identities = 230/275 (83%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 170 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccaccaat 229
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 230 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 289
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 290 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 349
Query: 345 agacctcatcaactgggtggcgctagagccggcgctcagaccaagcatcccgggcgacag 404
||||||||||||||| | ||||| ||||| || || || |||||||| ||||
Sbjct: 350 cgacctcatcaactggatcgcgctggagcccgccatctacccgagcatcccctccgacca 409
Query: 405 gtacggctgctggtccgggtcggcgacggtgctgc 439
||||||||||||||| || ||||||||| ||||||
Sbjct: 410 gtacggctgctggtcgggctcggcgacgatgctgc 444
>gb|CW073779.1|CW073779 104_339_10781480_114_31371_344 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781480, DNA
sequence
Length = 699
Score = 184 bits (93), Expect = 2e-044
Identities = 156/177 (88%)
Strand = Plus / Minus
Query: 256 tactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggc 315
|||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 194 tactacaaggggtggtaccatttcttctaccagtacaaccccaaaggcgctgtatggggc 135
Query: 316 aacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagccg 375
|||||||| |||||||||||||| || || ||||||||||||||| |||| ||||||||
Sbjct: 134 aacatcgtatgggcgcactcggtctcacgcgacctcatcaactggatggcattagagccg 75
Query: 376 gcgctcagaccaagcatcccgggcgacaggtacggctgctggtccgggtcggcgacg 432
||| ||| || |||||||| ||||| ||||||||||||||| || |||||||||
Sbjct: 74 gcgatcaagcccagcatcccctccgacaagtacggctgctggtcgggctcggcgacg 18
>gb|CX618822.1|CX618822 GABR1_41_H05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_41_H05_A002 5', mRNA sequence
Length = 411
Score = 178 bits (90), Expect = 1e-042
Identities = 180/210 (85%)
Strand = Plus / Plus
Query: 165 ggtgccgccgtccatcgtcaaccccctgctcaggacggggtaccacttccagccccccaa 224
||||||| | ||||| |||| ||||||||||||||| |||||||| |||||||| || |
Sbjct: 183 ggtgccggcctccattgtcagccccctgctcaggacagggtaccatttccagccgccaat 242
Query: 225 gaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtaccatttcttcta 284
|||||||||||| || |||||||| || |||||||||||||| ||||| || | |||||
Sbjct: 243 gaactggatcaacgaccccaacgctccgatgtactacaagggatggtatcacctgttcta 302
Query: 285 ccaatacaatcccaagggcgccgtatggggcaacatcgtgtgggcgcactcggtgtcgcg 344
||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| | || ||
Sbjct: 303 ccagtacaaccccaagggcgcagtatggggcaacatcgtgtgggctcactccatatcacg 362
Query: 345 agacctcatcaactgggtggcgctagagcc 374
||||||||||||||| | ||||| |||||
Sbjct: 363 cgacctcatcaactggatcgcgctggagcc 392
>gb|CL181797.1|CL181797 104_392_10896983_116_31926_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896983, DNA
sequence
Length = 649
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 278 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 337
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 338 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 397
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 398 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 457
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 458 tgcaccgaccc 468
Score = 60.0 bits (30), Expect = 8e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 218 caggctgacgtggaggtgagcttcgaggtg 247
>gb|CW042642.1|CW042642 104_276_10507205_114_30482 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10507205, DNA
sequence
Length = 611
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 305 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 364
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 365 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 424
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 425 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 484
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 485 tgcaccgaccc 495
Score = 60.0 bits (30), Expect = 8e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 245 caggctgacgtggaggtgagcttcgaggtg 274
>gb|CW050897.1|CW050897 104_291_10514924_115_30196 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514924, DNA
sequence
Length = 338
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 301 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 242
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 241 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 182
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 181 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 122
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 121 tgcaccgaccc 111
>gb|CW065109.1|CW065109 104_311_10522954_114_30122 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522954, DNA
sequence
Length = 388
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 93 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 152
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 153 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 212
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 213 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 272
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 273 tgcaccgaccc 283
Score = 60.0 bits (30), Expect = 8e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 33 caggctgacgtggaggtgagcttcgaggtg 62
>gb|CW385193.1|CW385193 fsbb001f068j07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068j07, DNA
sequence
Length = 710
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 283 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 342
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 343 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 402
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 403 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 462
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 463 tgcaccgaccc 473
Score = 60.0 bits (30), Expect = 8e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 223 caggctgacgtggaggtgagcttcgaggtg 252
>gb|CW385194.1|CW385194 fsbb001f068j07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068j07, DNA
sequence
Length = 706
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Minus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 682 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 623
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 622 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 563
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 562 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 503
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 502 tgcaccgaccc 492
Score = 119 bits (60), Expect = 1e-024
Identities = 79/84 (94%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 92 gatcgaccggtcggttgttgagagctt-ggagccgggggcaagacgtgcatcctctccag 34
Query: 1689 ggtctacccgtcgctggccatcgg 1712
||||||||||||||| ||||||||
Sbjct: 33 ggtctacccgtcgctcgccatcgg 10
Score = 79.8 bits (40), Expect = 9e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1550 acccgaacctgtaccgcccgacatttgcaggatttgtcgacacggacatctcgaacggca 1609
||||||||||||||| ||||| |||||||| ||||| ||||| ||||| || |||||||
Sbjct: 281 acccgaacctgtaccagccgacgtttgcaggttttgtggacacagacatttctaacggca 222
Query: 1610 agatatccctgagaagcctg 1629
|||| || ||||||||||||
Sbjct: 221 agatctctctgagaagcctg 202
>gb|CW427480.1|CW427480 fsbb001f139i05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f139i05, DNA
sequence
Length = 610
Score = 161 bits (81), Expect = 3e-037
Identities = 164/191 (85%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 1345 gacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtgagg 1404
||||||||||| ||| ||||||| || |||||||||||| | | |||| | |||| |
Sbjct: 149 gacccggcgctcgccggcgacgcgcagcggctgtgcggcgccaggggcgccgccgtggag 208
Query: 1405 ggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaacc 1464
|||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 209 ggcggcgtcggaccgttcgggctctgggtgctggcctccgccaaccgggaggagaggacc 268
Query: 1465 gcggtgttcttcagggtgttcaagcccgc---cgccggcgacaagcccgtggtgctcatg 1521
|| ||||||||||||||||||| |||||| || ||||| |||||| ||||||||||||
Sbjct: 269 gccgtgttcttcagggtgttcaggcccgcgcgcggcggcggcaagccggtggtgctcatg 328
Query: 1522 tgcaccgaccc 1532
|||||||||||
Sbjct: 329 tgcaccgaccc 339
Score = 60.0 bits (30), Expect = 8e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||||||
Sbjct: 89 caggctgacgtggaggtgagcttcgaggtg 118
>gb|CW023223.1|CW023223 104_163_10432326_1_30001 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10432326, DNA sequence
Length = 253
Score = 157 bits (79), Expect = 5e-036
Identities = 109/119 (91%)
Strand = Plus / Minus
Query: 1629 gatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctctccag 1688
||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 119 gatcgaccggtcggttgttgagagctttggagccgggggcaagacgtgcatcctctccag 60
Query: 1689 ggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaacggga 1747
||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 59 ggtctacccgtcgaaaaccatcggcaagaacgcccgcctctacgtgttcaacaacggga 1
>gb|BE595814.1|BE595814 PI1_54_D08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 474
Score = 155 bits (78), Expect = 2e-035
Identities = 186/222 (83%)
Strand = Plus / Plus
Query: 972 cggcgacgagcaccgcctgcgctacgactacggcaacttctacgcgtccaagacgttcta 1031
||||||| | ||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cggcgactaccaccggctccggtacgactacggcaacttctacgcgtccaagacgttcta 137
Query: 1032 cgacccggccaagcggcgccgcatcctgtggggctgggctaacgagtccgacaccgccgc 1091
|| ||||| |||||||| || | || || ||||||||||||||||||| || | |
Sbjct: 138 tgatccggcgaagcggcggcgggtgctcctcgggtgggctaacgagtccgacagcgtccc 197
Query: 1092 cgacgatgtggccaaaggctgggctggaatccaggccattccaaggacggtgtggctgga 1151
|||||| |||||| || ||||| || ||||| || || ||||||| | | ||||||||
Sbjct: 198 cgacgacaaggccaagggatgggccggcatccatgcgatcccaaggaagatctggctgga 257
Query: 1152 ccccagcgggaagcagctgttgcagtggcctatcgaggaggt 1193
|||||||||||||||||| |||||||||| |||||||||||
Sbjct: 258 tcccagcgggaagcagctgctgcagtggcccatcgaggaggt 299
Score = 46.1 bits (23), Expect = 0.013
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1282 caggctgacgtggaggtgagcttcgag 1308
|||||||| ||||||||||||||||||
Sbjct: 388 caggctgatgtggaggtgagcttcgag 414
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 661,449
Number of Sequences: 832831
Number of extensions: 661449
Number of successful extensions: 195304
Number of sequences better than 0.5: 209
Number of HSP's better than 0.5 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194620
Number of HSP's gapped (non-prelim): 658
length of query: 2027
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2007
effective length of database: 474,703,049
effective search space: 952729019343
effective search space used: 952729019343
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)