BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455862.2.1
(712 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI724073.1|AI724073 RHIZ1_26_F10.y1_A001 Rhizome1 (RHIZ1... 210 1e-052
gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2... 210 1e-052
gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2... 210 1e-052
gb|AW282744.1|AW282744 LG1_292_B12.g1_A002 Light Grown 1 (L... 202 3e-050
gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (L... 202 3e-050
gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 ... 202 3e-050
gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1... 202 3e-050
gb|BE917851.1|BE917851 OV1_7_H07.g1_A002 Ovary 1 (OV1) Sorg... 202 3e-050
gb|CF760782.1|CF760782 DSAF1_66_E10.b1_A011 Drought-stresse... 202 3e-050
gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stresse... 202 3e-050
gb|CW257134.1|CW257134 104_722_11227174_116_35151_087 Sorgh... 196 2e-048
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 194 8e-048
gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sor... 194 8e-048
gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 ... 192 3e-047
gb|AI723941.1|AI723941 RHIZ1_36_A09.y1_A001 Rhizome1 (RHIZ1... 172 3e-041
gb|AI724105.1|AI724105 RHIZ1_6_A09.y2_A001 Rhizome1 (RHIZ1)... 172 3e-041
gb|AI724391.1|AI724391 RHIZ1_36_A09.y2_A001 Rhizome1 (RHIZ1... 172 3e-041
gb|BM317458.1|BM317458 LG1_261_B10.g9_A002 Light Grown 1 (L... 170 1e-040
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 163 3e-038
gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorgh... 135 6e-030
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 135 6e-030
gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation... 135 6e-030
gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1... 135 6e-030
gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1... 135 6e-030
gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed see... 135 6e-030
gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated... 135 6e-030
gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-defic... 135 6e-030
gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-defic... 135 6e-030
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 135 6e-030
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 135 6e-030
gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves... 135 6e-030
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 135 6e-030
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 135 6e-030
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 135 6e-030
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 135 6e-030
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 129 4e-028
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 127 2e-027
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 127 2e-027
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 127 2e-027
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 127 2e-027
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 127 2e-027
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 127 2e-027
gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1... 127 2e-027
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 127 2e-027
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 127 2e-027
gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2... 125 6e-027
gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) So... 125 6e-027
gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-defic... 125 6e-027
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 125 6e-027
gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassino... 119 4e-025
gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methy... 113 2e-023
gb|CW120757.1|CW120757 104_498_11109515_148_34653_042 Sorgh... 111 9e-023
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 111 9e-023
gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stres... 111 9e-023
gb|BF422202.1|BF422202 FM1_13_B11.g1_A003 Floral-Induced Me... 109 4e-022
gb|CD226629.1|CD226629 CCC1_47_H10.b1_A007 Callus culture/c... 109 4e-022
gb|BG559633.1|BG559633 RHIZ2_71_E10.g1_A003 Rhizome2 (RHIZ2... 103 2e-020
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 92 8e-017
gb|CW120756.1|CW120756 104_498_11109515_116_34649_042 Sorgh... 88 1e-015
gb|BI099395.1|BI099395 IP1_41_F02.g1_A002 Immature pannicle... 88 1e-015
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 86 5e-015
gb|CW415288.1|CW415288 fsbb001f115f07f0 Sorghum methylation... 84 2e-014
gb|AW285926.2|AW285926 LG1_255_A06.b1_A002 Light Grown 1 (L... 82 8e-014
gb|BE362870.2|BE362870 DG1_90_E11.b1_A002 Dark Grown 1 (DG1... 82 8e-014
gb|CD228440.1|CD228440 CCC1_7_F10.g1_A007 Callus culture/ce... 82 8e-014
gb|CF429486.1|CF429486 PH1_22_C12.b1_A002 Phosphorous-defic... 80 3e-013
gb|CF432176.1|CF432176 NIT1_14_A05.g1_A002 Nitrogen-deficie... 80 3e-013
gb|AI724199.1|AI724199 RHIZ1_8_E06.y2_A001 Rhizome1 (RHIZ1)... 76 5e-012
gb|CF428603.1|CF428603 PH1_9_D02.b1_A002 Phosphorous-defici... 76 5e-012
gb|AW923729.1|AW923729 DG1_58_G02.g1_A002 Dark Grown 1 (DG1... 68 1e-009
gb|CL148239.1|CL148239 104_328_10592951_148_31782_075 Sorgh... 64 2e-008
gb|CW301138.1|CW301138 104_784_11464043_148_36254_034 Sorgh... 64 2e-008
gb|CW451376.1|CW451376 fsbb001f191g19k0 Sorghum methylation... 64 2e-008
gb|CF431009.1|CF431009 NIT1_4_H09.b1_A002 Nitrogen-deficien... 64 2e-008
gb|CF761780.1|CF761780 DSAF1_80_G11.g1_A011 Drought-stresse... 64 2e-008
gb|BG558625.1|BG558625 RHIZ2_58_C08.g1_A003 Rhizome2 (RHIZ2... 56 5e-006
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 50 3e-004
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 48 0.001
gb|CW118138.1|CW118138 104_494_11108040_148_34621_088 Sorgh... 48 0.001
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 48 0.001
gb|AW922582.1|AW922582 DG1_45_E11.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BE356646.1|BE356646 DG1_126_C05.g1_A002 Dark Grown 1 (DG... 48 0.001
gb|BE357653.1|BE357653 DG1_21_E10.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BE357851.1|BE357851 DG1_22_E09.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BG052635.1|BG052635 RHIZ2_27_D08.g1_A003 Rhizome2 (RHIZ2... 48 0.001
gb|BG052636.1|BG052636 RHIZ2_27_D09.g1_A003 Rhizome2 (RHIZ2... 48 0.001
gb|BG947040.1|BG947040 IP1_2_G11.g1_A002 Immature pannicle ... 48 0.001
gb|BI075604.1|BI075604 IP1_22_G09.g1_A002 Immature pannicle... 48 0.001
gb|BI211637.1|BI211637 IP1_60_A09.g1_A002 Immature pannicle... 48 0.001
gb|CD206211.1|CD206211 HS1_21_H12.b1_A012 Heat-shocked seed... 48 0.001
gb|CD211738.1|CD211738 HS1_64_D02.b1_A012 Heat-shocked seed... 48 0.001
gb|CD213475.1|CD213475 HS1_41_D06.b1_A012 Heat-shocked seed... 48 0.001
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 48 0.001
gb|BG487912.1|BG487912 RHIZ2_60_H06.g1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|BG558117.1|BG558117 RHIZ2_67_A09.g1_A003 Rhizome2 (RHIZ2... 46 0.004
gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum h... 46 0.004
gb|BG050374.1|BG050374 FM1_53_C07.g1_A003 Floral-Induced Me... 44 0.017
gb|BZ696058.1|BZ696058 SP__Ba0072P04.f SP__Ba Sorghum propi... 40 0.27
gb|CL187790.1|CL187790 104_403_10901133_116_32465_085 Sorgh... 40 0.27
>gb|AI724073.1|AI724073 RHIZ1_26_F10.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 317
Score = 210 bits (106), Expect = 1e-052
Identities = 151/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 40 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 99
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 100 tggggcaccgtcgcgtgggccaagaagaactacatgcactacaactactgcgacgatggg 159
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 160 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 205
>gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 549
Score = 210 bits (106), Expect = 1e-052
Identities = 151/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 230 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 289
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 290 tggggcaccgtcgcgtgggccaagaagaactacatgcactacaactactgcgacgatggg 349
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 350 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 395
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 116
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 117 ccacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 176
Query: 137 gcggctactccgccgacgcctg 158
| || ||| |||||||||||||
Sbjct: 177 gagggtacaccgccgacgcctg 198
>gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 210 bits (106), Expect = 1e-052
Identities = 151/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 219 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 278
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 279 tggggcaccgtcgcgtgggccaagaagaactacatgcactacaactactgcgacgatggg 338
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 339 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 384
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 105
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 106 ccacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 165
Query: 137 gcggctactccgccgacgcctg 158
| || ||| |||||||||||||
Sbjct: 166 gagggtacaccgccgacgcctg 187
>gb|AW282744.1|AW282744 LG1_292_B12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 71 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 130
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 131 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 190
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 191 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 236
Score = 44.1 bits (22), Expect = 0.017
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 121 ttcgccgtctcctaccgcggctactccgccgacgcctg 158
|||| |||||| ||||| |||||| |||||||||||||
Sbjct: 2 ttcgtcgtctcgtaccgaggctacaccgccgacgcctg 39
>gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 233 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 292
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 293 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 352
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 353 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 398
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 119
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 120 caacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 179
Query: 137 gcggctactccgccgacgcctg 158
| |||||| |||||||||||||
Sbjct: 180 gaggctacaccgccgacgcctg 201
>gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 194 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 253
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 254 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 313
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 314 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 359
Score = 180 bits (91), Expect = 1e-043
Identities = 131/143 (91%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 17 cgtacccgggcggg-aagcccatgtcggtgcacgccacgctgtgggacggcagctactgg 75
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 cgtaccccggcgggnaagcccatgtcggtgcacgccacgctgtgggacggcagctactgg 79
Query: 76 gccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctac 135
|| ||||||||||||||||||||||||||||||||| |||| |||| |||||| |||
Sbjct: 80 gcaacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtac 139
Query: 136 cgcggctactccgccgacgcctg 158
|| |||||| |||||||||||||
Sbjct: 140 cgaggctacaccgccgacgcctg 162
>gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 197 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 256
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 257 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 316
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 317 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 362
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 83
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 84 caacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 143
Query: 137 gcggctactccgccgacgcctg 158
| |||||| |||||||||||||
Sbjct: 144 gaggctacaccgccgacgcctg 165
>gb|BE917851.1|BE917851 OV1_7_H07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 278
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 43 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 102
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 103 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 162
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 163 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 208
>gb|CF760782.1|CF760782 DSAF1_66_E10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_66_E10_A011 5', mRNA sequence
Length = 434
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 102 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 161
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 162 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 221
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 222 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 267
Score = 67.9 bits (34), Expect = 1e-009
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 89 ggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctaccgcggctactccg 148
||||||||||||||||||||||| |||| |||| |||||| ||||| |||||| |||
Sbjct: 1 ggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtaccgaggctacaccg 60
Query: 149 ccgacgcctg 158
||||||||||
Sbjct: 61 ccgacgcctg 70
>gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_15_F05_A010 3', mRNA sequence
Length = 500
Score = 202 bits (102), Expect = 3e-050
Identities = 150/166 (90%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 175 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 234
Query: 241 tggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggc 300
|||||||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||
Sbjct: 235 tggggcaccgtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatggg 294
Query: 301 tggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 295 tggaggttcccgcagggattccccgccgagtgctcccgaaactgat 340
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 60
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 61 caacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 120
Query: 137 gcggctactccgccgacgcctg 158
| |||||| |||||||||||||
Sbjct: 121 gaggctacaccgccgacgcctg 142
>gb|CW257134.1|CW257134 104_722_11227174_116_35151_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227174, DNA
sequence
Length = 650
Score = 196 bits (99), Expect = 2e-048
Identities = 196/227 (86%), Gaps = 6/227 (2%)
Strand = Plus / Plus
Query: 126 cgtctcctaccgcggctactccgccgacgcctgcgtgc---ccgacggcga---cggccg 179
|||||||||||| || ||| ||||||||||||| || | ||| |||||| ||||
Sbjct: 1 cgtctcctaccgagggtacaccgccgacgcctgtgtccccaccggcggcgacgtcggcac 60
Query: 180 cccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccga 239
|||||| || |||| ||| || || ||||| ||||||| |||||||||||||||||||||
Sbjct: 61 cccgctgtcgtgcctcgctgggacggaccggtggatgaaccgccagctcgacgccgccga 120
Query: 240 gtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcgacgacgg 299
||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 121 gtggggcaccgtcgcgtgggccaagaagaactacatgcactacaactactgcgacgatgg 180
Query: 300 ctggcgattcccgcagggcttccccgccgagtgctcccgcaactgat 346
||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 181 gtggaggttcccgcagggattccccgccgagtgctcccgaaactgat 227
>gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 401
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 402 caacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 461
Query: 137 gcggctactccgccgacgcctg 158
| |||||| |||||||||||||
Sbjct: 462 gaggctacaccgccgacgcctg 483
>gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 305
Score = 194 bits (98), Expect = 8e-048
Identities = 131/142 (92%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 120
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 121 caacgcagcaggggaaggtgaaggtggactggtccaattcgccgttcgtcgtctcgtacc 180
Query: 137 gcggctactccgccgacgcctg 158
| |||||| |||||||||||||
Sbjct: 181 gaggctacaccgccgacgcctg 202
Score = 85.7 bits (43), Expect = 5e-015
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 181 ccgctctcctgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgag 240
||||| || ||||||||||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 234 ccgctgtcgtgccccgccgggacggaccggtggatgaaccgccagctcgacgccgccgag 293
Query: 241 tggggca 247
|||||||
Sbjct: 294 tggggca 300
>gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 436
Score = 192 bits (97), Expect = 3e-047
Identities = 142/157 (90%)
Strand = Plus / Plus
Query: 190 tgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgagtggggcacc 249
||||||||||| || ||||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct: 136 tgccccgccgggacggaccggtggatgaaccgccagcttgacgccgccgagtggggcacc 195
Query: 250 gtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggctggcgattc 309
||||| ||||| | | ||||||||||||||||||||||||||||||| || ||| | |||
Sbjct: 196 gtcgcgtgggcaaagaagaactacatgcactacaactactgcgacgatgggtggaggttc 255
Query: 310 ccgcagggcttccccgccgagtgctcccgcaactgat 346
|||||||| |||||||||||||||||||| |||||||
Sbjct: 256 ccgcagggattccccgccgagtgctcccgaaactgat 292
Score = 101 bits (51), Expect = 9e-020
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 64 ggcagctactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttc 123
|||||||| ||||| ||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 1 ggcagctattgggcaacgcagcaggggaaggtgaaggtggactggtccaattcgccgttc 60
Query: 124 gccgtctcctaccgcggctactccgccgacgcctg 158
| |||||| ||||| |||||| |||||||||||||
Sbjct: 61 gtcgtctcgtaccgaggctacaccgccgacgcctg 95
>gb|AI723941.1|AI723941 RHIZ1_36_A09.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 238
Score = 172 bits (87), Expect = 3e-041
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 220 cgccagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcac 279
||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||
Sbjct: 8 cgccagctcgacgccgccgagtggggcaccgtcgcgtgggcaaagaagaactacatgcac 67
Query: 280 tacaactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgc 339
||||||||||||||||| || ||| | ||||||||||| ||||||||||||||||||||
Sbjct: 68 tacaactactgcgacgatgggtggaggttcccgcagggattccccgccgagtgctcccga 127
Query: 340 aactgat 346
|||||||
Sbjct: 128 aactgat 134
>gb|AI724105.1|AI724105 RHIZ1_6_A09.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 238
Score = 172 bits (87), Expect = 3e-041
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 220 cgccagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcac 279
||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||
Sbjct: 8 cgccagctcgacgccgccgagtggggcaccgtcgcgtgggcaaagaagaactacatgcac 67
Query: 280 tacaactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgc 339
||||||||||||||||| || ||| | ||||||||||| ||||||||||||||||||||
Sbjct: 68 tacaactactgcgacgatgggtggaggttcccgcagggattccccgccgagtgctcccga 127
Query: 340 aactgat 346
|||||||
Sbjct: 128 aactgat 134
>gb|AI724391.1|AI724391 RHIZ1_36_A09.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 238
Score = 172 bits (87), Expect = 3e-041
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 220 cgccagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcac 279
||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||
Sbjct: 8 cgccagctcgacgccgccgagtggggcaccgtcgcgtgggcaaagaagaactacatgcac 67
Query: 280 tacaactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgc 339
||||||||||||||||| || ||| | ||||||||||| ||||||||||||||||||||
Sbjct: 68 tacaactactgcgacgatgggtggaggttcccgcagggattccccgccgagtgctcccga 127
Query: 340 aactgat 346
|||||||
Sbjct: 128 aactgat 134
>gb|BM317458.1|BM317458 LG1_261_B10.g9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 277
Score = 170 bits (86), Expect = 1e-040
Identities = 140/158 (88%)
Strand = Plus / Plus
Query: 190 tgccccgccggcaccgaccgctggatgagccgccagctcgacgccgccgagtggggcacc 249
||||||||||| || ||||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct: 1 tgccccgccgggacggaccggtggatgaaccgccagcttgacgccgccgagtggggcacc 60
Query: 250 gtcgcctgggccaggcagaactacatgcactacaactactgcgacgacggctggcgattc 309
||||| ||||| | | |||||||||||||||||| |||||||| ||| || ||| | |||
Sbjct: 61 gtcgcgtgggcaaagaagaactacatgcactacagctactgcggcgatgggtggaggttc 120
Query: 310 ccgcagggcttccccgccgagtgctcccgcaactgatt 347
|||||||| |||||||||||||||||||| | ||||||
Sbjct: 121 ccgcagggattccccgccgagtgctcccgaacctgatt 158
>gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592951, DNA
sequence
Length = 325
Score = 163 bits (82), Expect = 3e-038
Identities = 127/142 (89%)
Strand = Plus / Plus
Query: 17 cgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 76
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cgtaccccggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagctactggg 228
Query: 77 ccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtctcctacc 136
| ||||| |||||||||||||| |||||||||||| |||| |||| || ||| ||||
Sbjct: 229 caacgcaccaggggaaggtgaacgtggactggtccaattcgcctttcgtcgactcgtacc 288
Query: 137 gcggctactccgccgacgcctg 158
| |||||| || ||||||||||
Sbjct: 289 gaggctacaccaccgacgcctg 310
>gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412305, DNA
sequence
Length = 426
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 423 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 364
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 363 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 304
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 303 tcctacaaaggctactccgccgacgcctgcgt 272
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 214 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 155
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 154 cgacggctggaggttcccgcaggg 131
>gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 623
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 395 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 336
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 335 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 276
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 275 tcctacaaaggctactccgccgacgcctgcgt 244
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 186 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 127
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 126 cgacggctggaggttcccgcaggg 103
>gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217i24, DNA
sequence
Length = 386
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 19 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 78
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 79 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 138
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 139 tcctacaaaggctactccgccgacgcctgcgt 170
Score = 71.9 bits (36), Expect = 8e-011
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||| ||||||||||
Sbjct: 228 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctaccactactgcga 287
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 288 cgacggctggaggttcccgcaggg 311
>gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 54 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 113
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 114 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 173
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 174 tcctacaaaggctactccgccgacgcctgcgt 205
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 263 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 322
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 323 cgacggctggaggttcccgcaggg 346
>gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 375
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 27 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 86
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 87 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 146
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 147 tcctacaaaggctactccgccgacgcctgcgt 178
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 236 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 295
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 296 cgacggctggaggttcccgcaggg 319
>gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_C10_A012 3', mRNA sequence
Length = 597
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 6 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 65
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 66 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 125
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 126 tcctacaaaggctactccgccgacgcctgcgt 157
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 215 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 274
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 275 cgacggctggaggttcccgcaggg 298
>gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_H05_A002 3', mRNA sequence
Length = 599
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 63 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 122
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 123 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 182
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 183 tcctacaaaggctactccgccgacgcctgcgt 214
Score = 75.8 bits (38), Expect = 5e-012
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 268 aactacatgcactacaactactgcgacgacggctggcgattcccgcaggg 317
|||||||||| ||||||||||||||||||||||||| | |||||||||||
Sbjct: 306 aactacatgcgctacaactactgcgacgacggctggaggttcccgcaggg 355
>gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_F08_A002 5', mRNA sequence
Length = 623
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 561 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 502
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 501 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 442
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 441 tcctacaaaggctactccgccgacgcctgcgt 410
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 352 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 293
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 292 cgacggctggaggttcccgcaggg 269
>gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F09_A002 3', mRNA sequence
Length = 604
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 45 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 104
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 105 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 164
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 165 tcctacaaaggctactccgccgacgcctgcgt 196
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 254 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 313
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 314 cgacggctggaggttcccgcaggg 337
>gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 3', mRNA sequence
Length = 682
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 147 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 206
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 207 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 266
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 267 tcctacaaaggctactccgccgacgcctgcgt 298
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 356 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 415
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 416 cgacggctggaggttcccgcaggg 439
>gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 5', mRNA sequence
Length = 804
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 614 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 673
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 674 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 733
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 734 tcctacaaaggctactccgccgacgcctgcgt 765
>gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_77_E10_A002 3', mRNA sequence
Length = 565
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 67 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 126
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 127 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 186
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 187 tcctacaaaggctactccgccgacgcctgcgt 218
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 276 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 335
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 336 cgacggctggaggttcccgcaggg 359
>gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 3', mRNA sequence
Length = 665
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 87 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 146
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 147 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 206
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 207 tcctacaaaggctactccgccgacgcctgcgt 238
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 296 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 355
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 356 cgacggctggaggttcccgcaggg 379
>gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 5', mRNA sequence
Length = 810
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 599 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 658
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 659 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 718
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 719 tcctacaaaggctactccgccgacgcctgcgt 750
>gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 3', mRNA sequence
Length = 684
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 102 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 161
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 162 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 221
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 222 tcctacaaaggctactccgccgacgcctgcgt 253
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 311 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 370
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 371 cgacggctggaggttcccgcaggg 394
>gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 5', mRNA sequence
Length = 826
Score = 135 bits (68), Expect = 6e-030
Identities = 131/152 (86%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 615 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 674
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 675 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 734
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 735 tcctacaaaggctactccgccgacgcctgcgt 766
>gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 5', mRNA sequence
Length = 800
Score = 129 bits (65), Expect = 4e-028
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 575 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 634
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 635 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 694
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 695 tcctaccgcagctacgccgccnacgcctgcgt 726
Score = 40.1 bits (20), Expect = 0.27
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccg 250
||||||||| |||||||||||||||||
Sbjct: 773 cagctcgacaacgccgagtggggcaccg 800
>gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 670
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 266 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 325
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 326 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 385
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 386 tcctaccgcagctacgccgccaacgcctgcgt 417
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 464 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 523
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 524 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 583
Query: 343 tgat 346
||||
Sbjct: 584 tgat 587
>gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521981, DNA
sequence
Length = 654
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 516 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 457
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 456 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 397
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 396 tcctaccgcagctacgccgccaacgcctgcgt 365
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Minus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 318 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 259
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 258 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 199
Query: 343 tgat 346
||||
Sbjct: 198 tgat 195
>gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 655
Score = 127 bits (64), Expect = 2e-027
Identities = 131/152 (86%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 443 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 502
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | |||||||||| ||||||||||| ||||
Sbjct: 503 tactgggccaccgagaagggcaaggtgcccatcgactggtccggcgcgcccttcgtcgtc 562
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||| | |||||||||||||||||||||||
Sbjct: 563 tccta-caaggctactccgccgacgcctgcgt 593
>gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464043, DNA
sequence
Length = 655
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 112 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 171
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 172 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 231
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 232 tcctaccgcagctacgccgccaacgcctgcgt 263
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 310 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 369
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 370 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 429
Query: 343 tgat 346
||||
Sbjct: 430 tgat 433
>gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11467109, DNA
sequence
Length = 702
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 546 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 605
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 606 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 665
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 666 tcctaccgcagctacgccgccaacgcctgcgt 697
>gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 624
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 244 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 303
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 304 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 363
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 364 tcctaccgcagctacgccgccaacgcctgcgt 395
Score = 50.1 bits (25), Expect = 3e-004
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 442 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 501
Query: 283 aactactgc 291
|||||||||
Sbjct: 502 aactactgc 510
>gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 26 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 85
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 86 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 145
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| ||||| ||||| ||||||||||
Sbjct: 146 tcctaccgcagctacgccgccaacgcctgcgt 177
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 224 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 283
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 284 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 343
Query: 343 tgat 346
||||
Sbjct: 344 tgat 347
>gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 3', mRNA sequence
Length = 600
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 92 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 151
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | | |||||||| ||||||||||| ||||
Sbjct: 152 tactgggccaccgagaagggcaaggtgcccatcggctggtccggcgcgcccttcgtcgtc 211
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 212 tcctacaaaggctactccgccgacgcctgcgt 243
Score = 79.8 bits (40), Expect = 3e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 234 cgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactacaactactgcga 293
||||||||||||||||||| |||||| | |||||||||| |||||||||||||||
Sbjct: 301 cgccgagtggggcaccgtcaagtgggccgagagcaactacatgcgctacaactactgcga 360
Query: 294 cgacggctggcgattcccgcaggg 317
|||||||||| | |||||||||||
Sbjct: 361 cgacggctggaggttcccgcaggg 384
>gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 5', mRNA sequence
Length = 806
Score = 127 bits (64), Expect = 2e-027
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 617 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 676
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
||||||||||| || |||| |||||| | | |||||||| ||||||||||| ||||
Sbjct: 677 tactgggccaccgagaagggcaaggtgcccatcggctggtccggcgcgcccttcgtcgtc 736
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
|||||| |||||||||||||||||||||||
Sbjct: 737 tcctacaaaggctactccgccgacgcctgcgt 768
>gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 557
Score = 125 bits (63), Expect = 6e-027
Identities = 114/131 (87%)
Strand = Plus / Plus
Query: 31 aagcccatgtcggtgcacgccacgctgtgggacggcagctactgggccacgcagcagggg 90
||||||||| || |||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 33 aagcccatgacgctgcacgccacgctgtgggacggcagctactgggcgacggagaagggc 92
Query: 91 aaggtgaaggtggactggtccgccgcgcccttcgccgtctcctaccgcggctactccgcc 150
||| || | |||||||| | ||||||||||| ||||||||||||| |||||||||||
Sbjct: 93 aagatgcccatcgactggtctggcgcgcccttcgtcgtctcctaccgcagctactccgcc 152
Query: 151 gacgcctgcgt 161
||||||||||
Sbjct: 153 aacgcctgcgt 163
Score = 56.0 bits (28), Expect = 5e-006
Identities = 100/124 (80%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| |||||||||||| |||||| ||||| | |||||| ||||| ||||
Sbjct: 210 cagctcgacagcgccgagtggggaaccgtcaggtgggcggagaagaacttcatgcgctac 269
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 270 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 329
Query: 343 tgat 346
||||
Sbjct: 330 tgat 333
>gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 125 bits (63), Expect = 6e-027
Identities = 114/131 (87%)
Strand = Plus / Plus
Query: 31 aagcccatgtcggtgcacgccacgctgtgggacggcagctactgggccacgcagcagggg 90
||||||||| || |||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 19 aagcccatgacgctgcacgccacgctgtgggacggcagctactgggcgacggagaagggc 78
Query: 91 aaggtgaaggtggactggtccgccgcgcccttcgccgtctcctaccgcggctactccgcc 150
||| || | |||||||||| ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 79 aagatgcccatcgactggtccggcgcgcccttcgtcgtctcctaccgcagctacgccgcc 138
Query: 151 gacgcctgcgt 161
||||||||||
Sbjct: 139 aacgcctgcgt 149
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 196 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 255
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 256 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 315
Query: 343 tgat 346
||||
Sbjct: 316 tgat 319
>gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_D09_A002 3', mRNA sequence
Length = 547
Score = 125 bits (63), Expect = 6e-027
Identities = 114/131 (87%)
Strand = Plus / Plus
Query: 31 aagcccatgtcggtgcacgccacgctgtgggacggcagctactgggccacgcagcagggg 90
||||||||| || |||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 3 aagcccatgacgctgcacgccacgctgtgggacggcagctactgggcgacggagaagggc 62
Query: 91 aaggtgaaggtggactggtccgccgcgcccttcgccgtctcctaccgcggctactccgcc 150
||| || | |||||||||| ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 63 aagatgcccatcgactggtccggcgcgcccttcgtcgtctcctaccgcagctacgccgcc 122
Query: 151 gacgcctgcgt 161
||||||||||
Sbjct: 123 aacgcctgcgt 133
Score = 63.9 bits (32), Expect = 2e-008
Identities = 101/124 (81%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||||||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 180 cagctcgacaacgccgagtggggcaccgtcaggtgggcggagaagaacttcatgcgctac 239
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 240 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 299
Query: 343 tgat 346
||||
Sbjct: 300 tgat 303
>gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 5', mRNA sequence
Length = 725
Score = 125 bits (63), Expect = 6e-027
Identities = 129/151 (85%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 575 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 634
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 635 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 694
Query: 130 tcctaccgcggctactccgccgacgcctgcg 160
||||||||| ||||| ||||| |||||||||
Sbjct: 695 tcctaccgcagctacgccgccaacgcctgcg 725
>gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 3', mRNA sequence
Length = 587
Score = 119 bits (60), Expect = 4e-025
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 10 gacctggcgtacccgggcgggaagcccatgtcggtgcacgccacgctgtgggacggcagc 69
|||||||| |||||| || ||||||||| || ||||||||||||||||||||||||||
Sbjct: 54 gacctggcctacccgagctccaagcccatgacgctgcacgccacgctgtgggacggcagc 113
Query: 70 tactgggccacgcagcaggggaaggtgaaggtggactggtccgccgcgcccttcgccgtc 129
|||||||| ||| || |||| ||| || | |||||||||| ||||||||||| ||||
Sbjct: 114 tactgggcgacggagaagggcaagatgcccatcgactggtccggcgcgcccttcgtcgtc 173
Query: 130 tcctaccgcggctactccgccgacgcctgcgt 161
||||||||| | ||| ||||| ||||||||||
Sbjct: 174 tcctaccgcagttacgccgccaacgcctgcgt 205
Score = 56.0 bits (28), Expect = 5e-006
Identities = 100/124 (80%)
Strand = Plus / Plus
Query: 223 cagctcgacgccgccgagtggggcaccgtcgcctgggccaggcagaactacatgcactac 282
||||||||| ||||||| ||||||||||| ||||| | |||||| ||||| ||||
Sbjct: 252 cagctcgacaacgccgagcggggcaccgtcaggtgggcggagaagaacttcatgcgctac 311
Query: 283 aactactgcgacgacggctggcgattcccgcagggcttccccgccgagtgctcccgcaac 342
||||||||| | || || ||| | |||||||| || |||||||||||||| |||| ||
Sbjct: 312 aactactgccaggatgggtggaggttcccgcaaggactccccgccgagtgcagccgccac 371
Query: 343 tgat 346
||||
Sbjct: 372 tgat 375
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 234,950
Number of Sequences: 832831
Number of extensions: 234950
Number of successful extensions: 70995
Number of sequences better than 0.5: 99
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70645
Number of HSP's gapped (non-prelim): 285
length of query: 712
length of database: 491,359,669
effective HSP length: 20
effective length of query: 692
effective length of database: 474,703,049
effective search space: 328494509908
effective search space used: 328494509908
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)