BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441542.2.1
(3782 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 1001 0.0
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 898 0.0
gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2... 894 0.0
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 886 0.0
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 844 0.0
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 831 0.0
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 827 0.0
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 787 0.0
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 781 0.0
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 769 0.0
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 753 0.0
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 751 0.0
gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2... 749 0.0
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 722 0.0
gb|CN134244.1|CN134244 OX1_25_E01.b1_A002 Oxidatively-stres... 714 0.0
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 680 0.0
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 676 0.0
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 640 0.0
gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sor... 620 e-175
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 567 e-159
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 519 e-145
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 513 e-143
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 496 e-138
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 492 e-136
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 470 e-130
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 432 e-118
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 418 e-114
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 371 e-100
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 371 e-100
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 371 e-100
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 365 2e-098
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 361 3e-097
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 361 3e-097
gb|BG241798.1|BG241798 RHIZ2_50_D01.b1_A003 Rhizome2 (RHIZ2... 361 3e-097
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 359 1e-096
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 355 2e-095
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 331 3e-088
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 323 7e-086
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 323 7e-086
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 321 3e-085
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 321 3e-085
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 295 2e-077
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 291 2e-076
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 281 2e-073
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 280 9e-073
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 262 2e-067
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 262 2e-067
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 262 2e-067
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 246 1e-062
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 242 2e-061
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 242 2e-061
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 232 2e-058
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 230 8e-058
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 222 2e-055
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 216 1e-053
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 214 5e-053
gb|BG947539.1|BG947539 IP1_5_G03.g1_A002 Immature pannicle ... 212 2e-052
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 210 7e-052
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 210 7e-052
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 202 2e-049
gb|CD233283.1|CD233283 SS1_13_H10.b1_A012 Salt-stressed see... 194 4e-047
gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorgh... 192 2e-046
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 186 1e-044
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 186 1e-044
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 182 2e-043
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 180 6e-043
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 178 2e-042
gb|BI076320.1|BI076320 IP1_25_G03.g1_A002 Immature pannicle... 176 1e-041
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 172 2e-040
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 172 2e-040
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 172 2e-040
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 170 6e-040
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 170 6e-040
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 170 6e-040
gb|CW366545.1|CW366545 fsbb001f039j12k0 Sorghum methylation... 168 2e-039
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 168 2e-039
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 168 2e-039
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 165 4e-038
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 165 4e-038
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 163 1e-037
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 161 6e-037
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 157 9e-036
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 149 2e-033
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 149 2e-033
gb|BG273290.1|BG273290 OV2_25_D04.g1_A002 Ovary 2 (OV2) Sor... 149 2e-033
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 149 2e-033
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 147 9e-033
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 147 9e-033
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 147 9e-033
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 143 1e-031
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 141 5e-031
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 139 2e-030
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 139 2e-030
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 133 1e-028
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 133 1e-028
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 133 1e-028
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 131 5e-028
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 131 5e-028
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 127 8e-027
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 127 8e-027
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 127 8e-027
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 125 3e-026
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 125 3e-026
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 125 3e-026
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 123 1e-025
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 121 5e-025
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 117 8e-024
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 117 8e-024
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 115 3e-023
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 115 3e-023
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 107 8e-021
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 107 8e-021
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 105 3e-020
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 105 3e-020
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 103 1e-019
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 103 1e-019
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 103 1e-019
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 103 1e-019
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 103 1e-019
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 103 1e-019
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 103 1e-019
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 101 5e-019
gb|BQ656197.1|BQ656197 pSHR0113.2 Sorghum halepense rhizome... 101 5e-019
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 98 7e-018
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 98 7e-018
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 98 7e-018
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 96 3e-017
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 96 3e-017
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 92 4e-016
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 92 4e-016
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 92 4e-016
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 90 2e-015
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 90 2e-015
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 90 2e-015
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 90 2e-015
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 88 7e-015
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 88 7e-015
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 88 7e-015
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 88 7e-015
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 88 7e-015
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 88 7e-015
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 88 7e-015
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 86 3e-014
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 86 3e-014
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 84 1e-013
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 84 1e-013
gb|BE125071.1|BE125071 DG1_15_D04.b1_A002 Dark Grown 1 (DG1... 82 4e-013
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 82 4e-013
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 82 4e-013
gb|CW024405.1|CW024405 104_164_10434936_5_30003 Sorghum met... 80 2e-012
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 76 3e-011
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 76 3e-011
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 76 3e-011
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 72 4e-010
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 72 4e-010
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 72 4e-010
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 70 2e-009
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 70 2e-009
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 70 2e-009
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 68 7e-009
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 68 7e-009
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 66 3e-008
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 66 3e-008
gb|AW284365.1|AW284365 LG1_275_F04.g1_A002 Light Grown 1 (L... 66 3e-008
gb|BF655807.1|BF655807 FM1_41_F02.g1_A003 Floral-Induced Me... 66 3e-008
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 66 3e-008
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 66 3e-008
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 66 3e-008
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 66 3e-008
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 66 3e-008
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 64 1e-007
gb|CW282760.1|CW282760 104_759_11408886_116_35478_031 Sorgh... 64 1e-007
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 64 1e-007
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 64 1e-007
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 64 1e-007
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 64 1e-007
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 62 4e-007
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 62 4e-007
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 62 4e-007
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 62 4e-007
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 62 4e-007
gb|BI099373.1|BI099373 IP1_41_C08.g1_A002 Immature pannicle... 62 4e-007
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 62 4e-007
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 62 4e-007
gb|CW213541.1|CW213541 104_645_11191609_116_37038_013 Sorgh... 60 2e-006
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 60 2e-006
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 60 2e-006
gb|CW071795.1|CW071795 104_324_10591777_116_30462 Sorghum m... 58 6e-006
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 58 6e-006
gb|CW361556.1|CW361556 fsbb001f030d05k0 Sorghum methylation... 58 6e-006
gb|BE357266.1|BE357266 DG1_148_D12.b1_A002 Dark Grown 1 (DG... 58 6e-006
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 58 6e-006
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 58 6e-006
gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adap... 56 2e-005
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 56 2e-005
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 56 2e-005
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 54 1e-004
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 54 1e-004
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 54 1e-004
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 54 1e-004
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 54 1e-004
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 54 1e-004
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 52 4e-004
gb|CW496562.1|CW496562 fsbb001f288o02k0 Sorghum methylation... 52 4e-004
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 52 4e-004
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 52 4e-004
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 52 4e-004
gb|CL172260.1|CL172260 104_374_10890023_148_31774_311 Sorgh... 50 0.002
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 50 0.002
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 50 0.002
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 50 0.002
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 48 0.006
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 48 0.006
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 48 0.006
gb|CW039030.1|CW039030 104_271_10505258_114_30387 Sorghum m... 48 0.006
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 48 0.006
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 48 0.006
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 48 0.006
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 48 0.006
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 48 0.006
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 48 0.006
gb|BE363036.1|BE363036 DG1_9_B09.b1_A002 Dark Grown 1 (DG1)... 48 0.006
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 48 0.006
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 48 0.006
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 48 0.006
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 46 0.024
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 46 0.024
gb|CW244204.1|CW244204 104_705_11220467_116_37589_048 Sorgh... 46 0.024
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 46 0.024
gb|CW481818.1|CW481818 fsbb001f241j14f0 Sorghum methylation... 46 0.024
gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Me... 46 0.024
gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Me... 46 0.024
gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient se... 46 0.024
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 46 0.024
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 44 0.094
gb|CL161383.1|CL161383 104_352_10805682_114_31826_354 Sorgh... 44 0.094
gb|CW187969.1|CW187969 104_607_11172768_116_36728_088 Sorgh... 44 0.094
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 44 0.094
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 44 0.094
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 44 0.094
gb|CW420003.1|CW420003 fsbb001f126b21k0 Sorghum methylation... 44 0.094
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 44 0.094
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 44 0.094
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 44 0.094
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 44 0.094
gb|CL172259.1|CL172259 104_374_10890023_116_31775_311 Sorgh... 42 0.37
gb|CW033353.1|CW033353 104_262_10501907_114_30361 Sorghum m... 42 0.37
gb|CW036233.1|CW036233 104_267_10503639_114_30374 Sorghum m... 42 0.37
gb|CW194025.1|CW194025 104_617_11179878_116_36786_029 Sorgh... 42 0.37
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 42 0.37
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 42 0.37
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 42 0.37
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 42 0.37
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 42 0.37
gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle... 42 0.37
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 42 0.37
gb|CD230859.1|CD230859 SS1_9_B03.g1_A012 Salt-stressed seed... 42 0.37
gb|CD234577.1|CD234577 SS1_14_B08.g1_A012 Salt-stressed see... 42 0.37
>gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_31_H09_A002 5', mRNA sequence
Length = 654
Score = 1001 bits (505), Expect = 0.0
Identities = 617/653 (94%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 2979 tgaatgattcatatagggaaatggggcgcgcctgccaatgttcccagtaggagacatcat 3038
||||||||||| |||||||||||| |||||| |||||||||||||||| || ||||||||
Sbjct: 653 tgaatgattcacatagggaaatggagcgcgcttgccaatgttcccagttggggacatcat 594
Query: 3039 atgatggtcaggggaagcaccagggatttctcccgaaatctggctgttagtgactgacgg 3098
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 593 atgatggtcaggggaagcaccagggatttctcccgagatctggctgttagtgactgacgg 534
Query: 3099 gatgtatccccgagggatctcaccactgtcgtacttggtaagcccgatctcaccactgtc 3158
||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 533 gatgtatcctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtc 474
Query: 3159 atacttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcgcatcct 3218
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 473 atacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcct 414
Query: 3219 gtcagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgctagc 3278
|||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 413 gtcagcaatcttctgcttatggtcatcatcgccagatgcagggtagttgaagtcgctagc 354
Query: 3279 atcatcggcatcagtatcgtctccttcctcccctcggatcgctggactccccttgtggcg 3338
||||||||||||||| || |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 353 atcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtggcg 294
Query: 3339 cttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtactcgta 3398
|||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 293 cttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgta 234
Query: 3399 gcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctccctccgc 3458
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 233 gcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgc 174
Query: 3459 cgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccgcgcctccccga 3518
||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 173 cgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccga 114
Query: 3519 cttcacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac-aaggag 3577
||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 113 cttcacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggag 54
Query: 3578 ctggcctaggcagagccgaagcgacacaagtcggcaccactcccgagatccga 3630
|| |||| || |||||||| |||||| || ||||||||||||||||||||||
Sbjct: 53 ctagcctgggtagagccgagccgacacgagccggcaccactcccgagatccga 1
>gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 5', mRNA sequence
Length = 639
Score = 898 bits (453), Expect = 0.0
Identities = 591/637 (92%)
Strand = Plus / Minus
Query: 826 aggatacccgtggcgaagatcgagatgaagagagagatgaaccagatactagcgaagttg 885
|||||||| ||||| || || || || |||||||| |||||||| |||||||||||||||
Sbjct: 637 aggataccagtggcaaaaattgaaataaagagagaaatgaaccaaatactagcgaagttg 578
Query: 886 ctgatctctgggatgatgaacttccccgtgagcaggcagatggcaggcaggatacagtaa 945
|| |||||||| |||||||| || || |||||||| |||||||||||||| ||||| |||
Sbjct: 577 ctaatctctggaatgatgaattttccagtgagcagacagatggcaggcagaatacaataa 518
Query: 946 atgaggagcgggagggacgtgagcgggtagatggtggtgttgatgtaggcgaatctctcc 1005
||||| || |||| || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 517 atgagaagtgggatagatgtgagcgggtaaatggtggtgttgatgtaagcaaatctctcc 458
Query: 1006 aagaacttcaggcgtcctccgtagccgtaccatagggggcaatgccggctgaaaaggatt 1065
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 457 aagaacttcaggcgtcctccatagccgtaccataaggggcaatgccggctgaaaagaatt 398
Query: 1066 tccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatggga 1125
||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 397 tccacagaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatggga 338
Query: 1126 gccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgtgcg 1185
|| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 gcagatcccttgaaagctggccgcttaggcatgcagtaaatcgaccgccagcctcgtgcg 278
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatctca 1245
||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 277 tgcatcttgaatccagtaagaatatcttctgtcacagaaccatagatccacccaatctca 218
Query: 1246 gttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttcaga 1305
|||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 217 gttccccattcagtcttgtcctcatagccacaacttataacatggatagcttctttcaga 158
Query: 1306 agagattccggagtcgcagactgaggaacaccaccatattccatcagagtggacgcaaca 1365
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 157 agagattccggagttgcagactgaggaacaccaccatattccatcagagtggaggcaaca 98
Query: 1366 aaagctgcagattggccaaatctcttctccaagctcatttgagacataagaagtgatttc 1425
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aaagctgcggattgaccaaatctcttctccaagctcatttgagacataagaagtgatttc 38
Query: 1426 tcatcatcaaatccagcgccttcaactccctcctcta 1462
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 tcatcatcaaatccagcgccttcaactccctcctcta 1
>gb|BG465505.1|BG465505 RHIZ2_45_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 551
Score = 894 bits (451), Expect = 0.0
Identities = 520/543 (95%)
Strand = Plus / Minus
Query: 2761 gatagaggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgat 2820
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 551 gatagaggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgat 492
Query: 2821 gcatcaatatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatg 2880
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 491 gcatcaatatcaccaacaccccgaccctcagagggagcaatgcttgtgccatttgtcatg 432
Query: 2881 ggaattgttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaaca 2940
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaattgttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaaca 372
Query: 2941 ttcccaacgctaccagagaattccctcgacggatttgatgaatgattcatatagggaaat 3000
||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||
Sbjct: 371 ttcccaatgctaccagagaattcccttgacggatttggtgaatgattcacatagggaaat 312
Query: 3001 ggggcgcgcctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcacca 3060
|| || ||| |||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 311 ggagcacgcttgccaatgttcccagttggggacatcatatgatggtcaggggaagcacca 252
Query: 3061 gggatttctcccgaaatctggctgttagtgactgacgggatgtatccccgagggatctca 3120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gggatttctcccgagatctggctgttagtgactgacgggatgtatccccgagggatctca 192
Query: 3121 ccactgtcgtacttggtaagcccgatctcaccactgtcatacttggggcggccaacatcc 3180
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 191 ccactgtcatacttggtaagcccgatctcgccactgtcatacttggggcggccaacatcc 132
Query: 3181 ccgctgcccccagcattcatgcgccagctgcgcatcctgtcagcaatcttctgcttctgg 3240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctgg 72
Query: 3241 tcgtcattgccagatgcagggtagttgaagtcgctagcatcatcggcatcagtatcgtct 3300
|| || ||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 71 tcatcgttgccagatgcagggtagttgaagtcgctagcatcatcggcatcagtttcatct 12
Query: 3301 cct 3303
|||
Sbjct: 11 cct 9
>gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_13_G11_A012 5', mRNA sequence
Length = 610
Score = 886 bits (447), Expect = 0.0
Identities = 570/610 (93%), Gaps = 7/610 (1%)
Strand = Plus / Minus
Query: 3084 gttagtgactgacgggatgtatccccgagggatctcaccactgtcgtacttggtaagccc 3143
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 610 gttagtgactgacgggatgtatccccgagggatctcaccactgtcatacttagtaagccc 551
Query: 3144 gatctcaccactgtcatacttggggcggccaacatccccgctgcccccagcattcatgcg 3203
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 550 gatctcgccactgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcg 491
Query: 3204 ccagctgcgcatcctgtcagcaatcttctgcttctggtcgtcattgccagatgcagggta 3263
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 490 ccagctgcgcatcctgtcagcaatcttatgcttctggtcatcattgccagatgcagggta 431
Query: 3264 gttgaagtcgctagcatcatcggcatcagtatcgtctccttcctcccctcggatcgctgg 3323
|||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||
Sbjct: 430 gttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccacggatcgccgg 371
Query: 3324 actccccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtcctt 3383
|||||||||||||||||||||||| | ||||||||||||||||| || |||||||||||
Sbjct: 370 gctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcctt 311
Query: 3384 gcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaa 3443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaa 251
Query: 3444 gacgtctccctccgccgtagtgcccacgccatcgccgcagatctggcacacctgccctcc 3503
|||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 250 gacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcc 191
Query: 3504 cccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcgagctcgccca 3563
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 190 cccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcacgcgagctcaccaa 131
Query: 3564 gaaccgac-aaggagctggcctaggcagagccgaagcgacacaagtcggcaccactcccg 3622
|||||||| | |||||| |||| || |||||||| |||||| || ||||||||||||||
Sbjct: 130 gaaccgacgagggagctagcctgggtagagccgagccgacacgagccggcaccactcccg 71
Query: 3623 agatccgagca------ggggcacggatcagcaccgcatctcccgctgcgagcgtggtgc 3676
||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 70 agatccgagcagggaggggggcacggatcagcaccgcatctcccgctgcgagagtgctgg 11
Query: 3677 tactagtagt 3686
||||||||||
Sbjct: 10 tactagtagt 1
>gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 585
Score = 844 bits (426), Expect = 0.0
Identities = 540/577 (93%), Gaps = 7/577 (1%)
Strand = Plus / Minus
Query: 3093 tgacgggatgtatccccgagggatctcaccactgtcgtacttggtaagcccgatctcacc 3152
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 585 tgacgggatgtatccccgagggatctcaccactgtcatacttggtaagcccgatctcgcc 526
Query: 3153 actgtcatacttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcg 3212
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 525 actgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcg 466
Query: 3213 catcctgtcagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtc 3272
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 465 catcctgtcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaagtc 406
Query: 3273 gctagcatcatcggcatcagtatcgtctccttcctcccctcggatcgctggactcccctt 3332
||||||||||||||||||||| || |||||||||||||| |||||||| || ||||||||
Sbjct: 405 gctagcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctcccctt 346
Query: 3333 gtggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgta 3392
|||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 345 gtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgta 286
Query: 3393 ctcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctcc 3452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 285 ctcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtcccc 226
Query: 3453 ctccgccgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccgcgcct 3512
|||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 225 gtccgccgtggtgcccacgccgtcgccacagatctggcacacctgcccgcccccacgcct 166
Query: 3513 ccccgacttcacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac- 3571
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 165 ccccgacttcacgccgtccgcgtcgccctccatgggaggcgagctcgccaagaaccgacg 106
Query: 3572 aaggagctggcctaggcagagccgaagcgacacaagtcggcaccactcccgagatccgag 3631
| |||||| |||| ||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 105 agggagctagcctgggcagagccgagccgacacgagccggcaccactcccgagatccgag 46
Query: 3632 ca------ggggcacggatcagcaccgcatctcccgc 3662
|| |||||||||||||||||||||||||||||
Sbjct: 45 cagggaggggggcacggatcagcaccgcatctcccgc 9
>gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 506
Score = 831 bits (419), Expect = 0.0
Identities = 480/499 (96%), Gaps = 6/499 (1%)
Strand = Plus / Minus
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 506 ccatagatccacccaatctcagttccccattcagtcttgtcctcatagccacaacttata 447
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatat 1344
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 446 acatggatagcttctttcagaagagattccggagttgcagactgaggaacaccaccatat 387
Query: 1345 tccatcagagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatt 1404
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 386 tccatcagagtggaggcaacaaaagctgcagattgaccaaatctcttctccaagctcatt 327
Query: 1405 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 267
Query: 1465 tcttcaagattgaatactggcacagaactgtccacatgcttctgtgactttttcttgtct 1524
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcttcgagattgaatactggcacagaactgtccacatgcttctgtgactttttcttgtct 207
Query: 1525 gagccc---ttctttgatttgcttcccttcttcctgccaccacatagtgatgacaagaaa 1581
|||||| |||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 206 gagcccttcttctttgatttgtttgtcttcttcctgccaccacatagtgatgacaagaaa 147
Query: 1582 ccacc---cttcttttgcttaattgggggctcataaccatatagagctgttctgttgaaa 1638
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ccacccttcttcttttgcttaattgggggctcataaccatatagagctgttctgttgaaa 87
Query: 1639 acacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaata 1698
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 acacaaccagttcccacataaactggtccttggatgccatcaagacctctcaagttaata 27
Query: 1699 tcgaaaaacacggtgttcc 1717
|| ||||||||||||||||
Sbjct: 26 tcaaaaaacacggtgttcc 8
>gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 5', mRNA sequence
Length = 552
Score = 827 bits (417), Expect = 0.0
Identities = 502/529 (94%), Gaps = 1/529 (0%)
Strand = Plus / Minus
Query: 3110 gagggatctcaccactgtcgtacttggtaagcccgatctcaccactgtcatacttggggc 3169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 552 gagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcatacttggggc 493
Query: 3170 ggccaacatccccgctgcccccagcattcatgcgccagctgcgcatcctgtcagcaatct 3229
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 492 ggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagcaatct 433
Query: 3230 tctgcttctggtcgtcattgccagatgcagggtagttgaagtcgctagcatcatcggcat 3289
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctgcttctggtcatcattgccagatgcagggtagttgaagtcgctagcatcatcggcat 373
Query: 3290 cagtatcgtctccttcctcccctcggatcgctggactccccttgtggcgcttgtacttgt 3349
|||| || |||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 372 cagtttcatctccttcctccccacggatcgccgggctccccttgtggcgcttgtacttgg 313
Query: 3350 ttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtactcgtagcaggggcggc 3409
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagcaggggcggc 253
Query: 3410 acaccgggaacccgcagacgtcgcaggcggtgaagacgtctccctccgccgtagtgccca 3469
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 252 acaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgccgtggtgccca 193
Query: 3470 cgccatcgccgcagatctggcacacctgccctcccccgcgcctccccgacttcacgccgt 3529
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 cgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccgacttcacgccgt 133
Query: 3530 ccgcgtcgccctccatggcaggcgagctcgcccagaaccgac-aaggagctggcctaggc 3588
|||||||||||||||||||||||||||||||| ||||||||| | |||||| |||| ||
Sbjct: 132 ccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgagggagctagcctgggt 73
Query: 3589 agagccgaagcgacacaagtcggcaccactcccgagatccgagcagggg 3637
|||||||| |||||| || |||||||||||||||||||||||||||||
Sbjct: 72 agagccgagccgacacgagccggcaccactcccgagatccgagcagggg 24
>gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 787 bits (397), Expect = 0.0
Identities = 479/505 (94%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 3134 tggtaagcccgatctcaccactgtcatacttggggcggccaacatccccgctgcccccag 3193
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tggtaagcccgatctcgccactgtcatacttggggcggccaacatccccgctgcccccag 464
Query: 3194 cattcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcgtcattgccag 3253
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 463 cgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcattgccag 404
Query: 3254 atgcagggtagttgaagtcgctagcatcatcggcatcagtatcgtctccttcctcccctc 3313
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 403 atgcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccac 344
Query: 3314 ggatcgctggactccccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtg 3373
||||||| || |||||||||||||||||||||||| | ||||||||||||||||| || |
Sbjct: 343 ggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcg 284
Query: 3374 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgc 3433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgc 224
Query: 3434 aggcggtgaagacgtctccctccgccgtagtgcccacgccatcgccgcagatctggcaca 3493
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 223 aggcggtgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcaca 164
Query: 3494 cctgccctcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcg 3553
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cctgcccgcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcg 104
Query: 3554 agctcgcccagaaccgac-aaggagctggcctaggcagagccgaagcgacacaagtcggc 3612
|||||||| ||||||||| | |||||| |||| || |||||||| |||||| || ||||
Sbjct: 103 agctcgccaagaaccgacgagggagctagcctgggtagagccgagccgacacgagccggc 44
Query: 3613 accactcccgagatccgagcagggg 3637
|||||||||||||||||||||||||
Sbjct: 43 accactcccgagatccgagcagggg 19
>gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 781 bits (394), Expect = 0.0
Identities = 451/470 (95%)
Strand = Plus / Minus
Query: 3102 gtatccccgagggatctcaccactgtcgtacttggtaagcccgatctcaccactgtcata 3161
|||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 495 gtatcctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcata 436
Query: 3162 cttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcgcatcctgtc 3221
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 435 cttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtc 376
Query: 3222 agcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgctagcatc 3281
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgctagcatc 316
Query: 3282 atcggcatcagtatcgtctccttcctcccctcggatcgctggactccccttgtggcgctt 3341
|||||||||||| || |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 315 atcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtggcgctt 256
Query: 3342 gtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtactcgtagca 3401
||||||| | ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 255 gtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgctcgtactcgtagca 196
Query: 3402 ggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctccctccgccgt 3461
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 195 ggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctccgccgt 136
Query: 3462 agtgcccacgccatcgccgcagatctggcacacctgccctcccccgcgcctccccgactt 3521
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 135 ggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctccccgactt 76
Query: 3522 cacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac 3571
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 cacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgac 26
>gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 455
Score = 769 bits (388), Expect = 0.0
Identities = 433/448 (96%)
Strand = Plus / Minus
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttttgt 2124
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 455 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 396
Query: 2125 gccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatggcc 2184
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 395 gccttagcaacaaggccatttatcctaactttgaattcttcatattctctcttcatggct 336
Query: 2185 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 335 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctggcag 276
Query: 2245 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccatttt 2304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 275 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggtacccatttt 216
Query: 2305 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatcatca 2364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcattgcagctccatcatca 156
Query: 2365 gatacatagcaagagaccttatccacaggatagtccacagcgagaatggatagcacggta 2424
||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 155 gatacatagcaagagaccttatccacagggtaatccacagcaagaatggatagcacggta 96
Query: 2425 ttggcagtgacaagaggaggctccttcattgggtcgacagtactgacaaaaatgtcaaca 2484
|||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 95 ttggcagtaacaagaggaggctccttcattgggtcgactgtactgacgaaaatgtcaaca 36
Query: 2485 gcagccaactgagatggctcaccttccc 2512
||||||||||||||||| ||||||||||
Sbjct: 35 gcagccaactgagatggttcaccttccc 8
>gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_E03_A002 5', mRNA sequence
Length = 531
Score = 753 bits (380), Expect = 0.0
Identities = 487/522 (93%), Gaps = 8/522 (1%)
Strand = Plus / Minus
Query: 3155 tgtcatacttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcgca 3214
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 531 tgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgca 472
Query: 3215 tcctgtcagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgc 3274
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 471 tcctgtcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgc 412
Query: 3275 tagcatcatcggcatcagtatcgtctccttcctcccctcggatcgctggactccccttgt 3334
||||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||
Sbjct: 411 tagcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgt 352
Query: 3335 ggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtact 3394
|||||||||||||| | ||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 351 ggcgcttgtacttggtcttgcactgggggcgcgcctgcgtgccgtccttgcgctcgtact 292
Query: 3395 cgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctccct 3454
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 291 cgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccct 232
Query: 3455 ccgccgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccgcgcctcc 3514
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 231 ccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctcc 172
Query: 3515 ccgacttcacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac-aa 3573
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 171 ccgacttcacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgacgag 112
Query: 3574 ggagctggcctaggcagagccgaagcgacacaagtcggcaccactcccgagatccgagca 3633
||| || |||| || ||| |||| |||||| || |||||||||||||||||||||||||
Sbjct: 111 ggaactagcctgggtagacccgagccgacacgagccggcaccactcccgagatccgagca 52
Query: 3634 ggg-------gcacggatcagcaccgcatctcccgctgcgag 3668
||| ||||||||||||||||||||||||||||||||
Sbjct: 51 gggggggggcgcacggatcagcaccgcatctcccgctgcgag 10
>gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_66_G06_A012 5', mRNA sequence
Length = 537
Score = 751 bits (379), Expect = 0.0
Identities = 498/537 (92%), Gaps = 7/537 (1%)
Strand = Plus / Minus
Query: 3157 tcatacttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcgcatc 3216
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 537 tcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatc 478
Query: 3217 ctgtcagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgcta 3276
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 477 ctgtcagcaatcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgcta 418
Query: 3277 gcatcatcggcatcagtatcgtctccttcctcccctcggatcgctggactccccttgtgg 3336
||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||||
Sbjct: 417 gcatcatcggcatcagtttcatctccttcctccccacggatcgccgggctccccttgtgg 358
Query: 3337 cgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtactcg 3396
|||||||||||| | ||||||||||||||||| || | |||||||||||||||||||||
Sbjct: 357 cgcttgtacttggtcttgcactgggggcacgcctgcgncccgtccttgcgctcgtactcg 298
Query: 3397 tagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctccctcc 3456
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 297 tagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtccccctcc 238
Query: 3457 gccgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccgcgcctcccc 3516
|| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 237 gctgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccgcgcctcccc 178
Query: 3517 gacttcacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac-aagg 3575
||||||||||||||||||||||||||||||||| |||||||| || ||||||||| | ||
Sbjct: 177 gacttcacgccgtccgcgtcgccctccatggcacgcgagctcaccaagaaccgacgaggg 118
Query: 3576 agctggcctaggcagagccgaagcgacacaagtcggcaccactcccgagatccgagca-- 3633
|||| |||| || |||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 117 agctagcctgggtagagccgagccgacacgagccggcaccactcccgagatccgagcagg 58
Query: 3634 ----ggggcacggatcagcaccgcatctcccgctgcgagcgtggtgctactagtagt 3686
||||||||||||||||||||||||||||||||||| ||| || ||||||||||
Sbjct: 57 gaggggggcacggatcagcaccgcatctcccgctgcgagagtgctggtactagtagt 1
>gb|BG559985.1|BG559985 RHIZ2_68_A11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 482
Score = 749 bits (378), Expect = 0.0
Identities = 450/474 (94%)
Strand = Plus / Minus
Query: 2889 tcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattcccaac 2948
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcccttatcctgtttcattttccagccatcaaccctctctttccaggcaacattcccaat 423
Query: 2949 gctaccagagaattccctcgacggatttgatgaatgattcatatagggaaatggggcgcg 3008
|||||||||||||||||| |||||||||| ||||||||||| |||||||||||| || ||
Sbjct: 422 gctaccagagaattcccttgacggatttggtgaatgattcacatagggaaatggagcacg 363
Query: 3009 cctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcaccagggatttc 3068
| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cttgccaatgttcccagttggggacatcatatgatggtcaggggaagcaccagggatttc 303
Query: 3069 tcccgaaatctggctgttagtgactgacgggatgtatccccgagggatctcaccactgtc 3128
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcccgagatctggctgttagtgactgacgggatgtatccccgagggatctcaccactgtc 243
Query: 3129 gtacttggtaagcccgatctcaccactgtcatacttggggcggccaacatccccgctgcc 3188
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atacttggtaagcccgatctcgccactgtcatacttggggcggccaacatccccgctgcc 183
Query: 3189 cccagcattcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcgtcatt 3248
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 182 cccagcgttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcgtt 123
Query: 3249 gccagatgcagggtagttgaagtcgctagcatcatcggcatcagtatcgtctccttcctc 3308
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 122 gccagatgcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctc 63
Query: 3309 ccctcggatcgctggactccccttgtggcgcttgtacttgtttttgcactgggg 3362
||| |||||||| || |||||||||||||||||||||||| | |||||||||||
Sbjct: 62 cccacggatcgccgggctccccttgtggcgcttgtacttggtcttgcactgggg 9
>gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 669
Score = 722 bits (364), Expect = 0.0
Identities = 547/608 (89%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 608 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 549
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 548 tgagtatctgggccagtgacacgggtggtgaacgggtcgatgcgaacccacagcaaggag 489
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 aagatcgacgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 429
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
|||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 428 cccatgagacccttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 369
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| ||||| || ||||| || ||||| ||||||||||| || |||||||| || |||
Sbjct: 368 ttgccaaagagtgggccccatgattggtaaccgctgttgatcgcataggagataccagca 309
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || |||||||||||||| || ||||||
Sbjct: 308 acaacaccaaccaggttgatgatcagaatggtcgttggcgggatcagaagggttgtccac 249
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtg 687
|||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 248 ttgaacatgtacagctccgcaaagtcaccgtcttcatctgaggcctttgaggtgacagtg 189
Query: 688 aagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgg 747
|||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 188 aagttggtgtcgataccagcaagcaccttgaggagaccctggaagacggcgaaaaggtgg 129
Query: 748 gcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacg 807
|| ||||| ||||| ||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 128 gcagagatacctccaatgacccagaattgttcattcctccaccactcgtcaattccaaca 69
Query: 808 ccgctccacctcatctccaggatacccgtggcgaagatcgagatgaagagagagatgaac 867
|| |||||||||||||| |||||||| ||||| || || || || |||||||| ||||||
Sbjct: 68 ccactccacctcatctcgaggataccagtggcaaaaattgaaataaagagagaaatgaac 9
Query: 868 cagatact 875
|| |||||
Sbjct: 8 caaatact 1
>gb|CN134244.1|CN134244 OX1_25_E01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_E01_A002 3', mRNA sequence
Length = 791
Score = 714 bits (360), Expect = 0.0
Identities = 411/428 (96%)
Strand = Plus / Minus
Query: 2866 gtgccattcgtcatgggaattgttcccttgtcctgcttcattttccagccatcaaccctc 2925
|||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 436 gtgccattcgccatgggaattgttcccttatcctgtttcattttccagccatcaaccctc 377
Query: 2926 tctttccaggcaacattcccaacgctaccagagaattccctcgacggatttgatgaatga 2985
|||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||
Sbjct: 376 tctttccaggcaacattcccaatgctaccagagaattcccttgacggatttggtgaatga 317
Query: 2986 ttcatatagggaaatggggcgcgcctgccaatgttcccagtaggagacatcatatgatgg 3045
|||| |||||||||||| |||||| |||||||||||||||| || |||||||||||||||
Sbjct: 316 ttcacatagggaaatggagcgcgcttgccaatgttcccagttggggacatcatatgatgg 257
Query: 3046 tcaggggaagcaccagggatttctcccgaaatctggctgttagtgactgacgggatgtat 3105
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 256 tcaggggaagcaccagggatttctcccgagatctggctgttagtgactgacgggatgtat 197
Query: 3106 ccccgagggatctcaccactgtcgtacttggtaagcccgatctcaccactgtcatacttg 3165
|| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 196 cctcgagggatctcaccactgtcatacttggtaagcccgatctcgccactgtcatacttg 137
Query: 3166 gggcggccaacatccccgctgcccccagcattcatgcgccagctgcgcatcctgtcagca 3225
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 136 gggcggccaacatccccgctgcccccagcgttcatgcgccagctgcgcatcctgtcagca 77
Query: 3226 atcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgctagcatcatcg 3285
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atcttctgcttctggtcatcattgccagatgcagggtagttgaagtcgctagcatcatcg 17
Query: 3286 gcatcagt 3293
||||||||
Sbjct: 16 gcatcagt 9
Score = 165 bits (83), Expect = 4e-038
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 558 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 499
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaagga 386
||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct: 498 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaagga 440
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || ||||||| ||
Sbjct: 787 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagaca 729
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 728 ctctccacaaagtag 714
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 656 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 602
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 601 acaattggtggcagtggcacat 580
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 711 taacttatatcaacaaaagaatgca 687
>gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 680 bits (343), Expect = 0.0
Identities = 419/443 (94%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 3196 ttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcgtcattgccagat 3255
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 461 ttcatgcgccagctgcgcatcctgtcagcaatcttctgcttctggtcatcattgccagat 402
Query: 3256 gcagggtagttgaagtcgctagcatcatcggcatcagtatcgtctccttcctcccctcgg 3315
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 401 gcagggtagttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccacgg 342
Query: 3316 atcgctggactccccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtgtg 3375
||||| || |||||||||||||||||||||||| | ||||||||||||||||| || |||
Sbjct: 341 atcgccgggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtg 282
Query: 3376 ccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcag 3435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccgtccttgcgctcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcag 222
Query: 3436 gcggtgaagacgtctccctccgccgtagtgcccacgccatcgccgcagatctggcacacc 3495
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 221 gcggtgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacc 162
Query: 3496 tgccctcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcgag 3555
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tgcccgcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcgag 102
Query: 3556 ctcgcccagaaccgac-aaggagctggcctaggcagagccgaagcgacacaagtcggcac 3614
|||||| ||||||||| | |||||| |||| || |||||||| |||||| || ||||||
Sbjct: 101 ctcgccaagaaccgacgagggagctagcctgggtagagccgagccgacacgagccggcac 42
Query: 3615 cactcccgagatccgagcagggg 3637
|||||||||||||||||||||||
Sbjct: 41 cactcccgagatccgagcagggg 19
>gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_C03_A002 3', mRNA sequence
Length = 857
Score = 676 bits (341), Expect = 0.0
Identities = 503/557 (90%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 559 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 500
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 499 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 440
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 439 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 380
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 379 cccatgagacctttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 320
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || |||
Sbjct: 319 ttgccaaagagcgggccccatgattggtaaccgctgttgatcgcgtaggagataccagca 260
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || || ||||||||||| || ||||||
Sbjct: 259 acaacaccaaccaggttgatgatcagaatggtcgttggtgggatcagaagcgttgtccac 200
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtg 687
|||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 199 ttgaacatgtacagctccgcaaagtcaccgtcttcatctgaggcctttgaggtgacagtg 140
Query: 688 aagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgg 747
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 139 aagttggtgtcgataccggcaagcaccttgaggagaccctggaagacggcgaaaaggtgg 80
Query: 748 gcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacg 807
|| ||||| ||||| ||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 79 gcagagatacctccaatgacccagaattgttcattcctccaccactcgtcaattccaaca 20
Query: 808 ccgctccacctcatctc 824
|| ||||||||||||||
Sbjct: 19 ccactccacctcatctc 3
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || ||||||| ||
Sbjct: 788 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagaca 730
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 729 ctctccacaaagtag 715
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 657 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 603
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 602 acaattggtggcagtggcacat 581
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 712 taacttatatcaacaaaagaatgca 688
>gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_H10_A002 3', mRNA sequence
Length = 785
Score = 640 bits (323), Expect = 0.0
Identities = 497/555 (89%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 555 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 496
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 495 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 436
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 435 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 376
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || |||||||| ||||||||||| |||
Sbjct: 375 cccatgagacctttgaggaatgggtacaagtgcacaatcacccaaaaggcgaagaaaagc 316
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || |||
Sbjct: 315 ttgccaaagagcgggccccatgattggtaaccgctgttgatcgcgtaggagataccagca 256
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || || |||||||||| || ||||||
Sbjct: 255 acaacaccaaccaggttgatgatcagaatggtcgttggtgggatcagaaacgttgtccac 196
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtg 687
|||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 195 ttgaacatgtacagctccgcaaagtcaccgtcttcatctgaggcctttgaggtgacagtg 136
Query: 688 aagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgg 747
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 135 aaattggtgtcgataccggcaagcaccttgaggagaccctggaagacggcgaaaaggtgg 76
Query: 748 gcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacg 807
|| ||||| ||||| ||||||||||| || || ||||||||||||||||| || || ||
Sbjct: 75 gcagagatacctccaatgacccagaattgttcattcctccaccactcgtcaattccaaca 16
Query: 808 ccgctccacctcatc 822
|| ||||||||||||
Sbjct: 15 ccactccacctcatc 1
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || ||||||| ||
Sbjct: 784 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagaca 726
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 725 ctctccacaaagtag 711
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 653 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 599
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 598 acaattggtggcagtggcacat 577
Score = 42.1 bits (21), Expect = 0.37
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
||||||||| |||||||||||||||
Sbjct: 708 taacttataccaacaaaagaatgca 684
>gb|BG273410.1|BG273410 OV2_25_D04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 370
Score = 620 bits (313), Expect = e-175
Identities = 349/361 (96%)
Strand = Plus / Minus
Query: 2587 atccaggaaagagcaaaccagatctcacatataacagatagaagccacagtgggtatgca 2646
|||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 370 atccaggaaagagcgaaccagatctcacatataacagacagaagccataatgggtatgca 311
Query: 2647 ttacgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgtagc 2706
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttgcgcacaggatttgtgatacggtagtgcaagaagatgcttagaacaatcaatcgtagc 251
Query: 2707 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 2766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 191
Query: 2767 ggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgatgcatca 2826
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 190 ggctggcgagtttcatcgttcaataaggcatcttccatgttataatcagttgatgcatca 131
Query: 2827 atatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatgggaatt 2886
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 130 atatcaccaacaccccgaccctcagagggagcaatgctcgtgccattcgtcatgggaatt 71
Query: 2887 gttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattccca 2946
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gttcccttatcctgtttcattttccagccatcaaccctctctttccaggcaacattccca 11
Query: 2947 a 2947
|
Sbjct: 10 a 10
>gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_H09_A002 3', mRNA sequence
Length = 705
Score = 567 bits (286), Expect = e-159
Identities = 433/482 (89%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 482 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 423
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 422 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 363
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 362 aagattgatgccaacaggattgcccaaacaaccacgatggtcggggtgcggttttgccga 303
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || ||||||||||||||||| || |||
Sbjct: 302 cccatgagacctttgaggaatgggtacaagtgcacaatcacccagaaggcgaaaaaaagc 243
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| || ||||| ||||| || ||||| ||||||||||| ||||||||||| || |||
Sbjct: 242 ttgccaaaaagcgggccccatgattggtaaccgctgttgatcgcgtaggagataccagca 183
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || |||||||||||||||| ||||| || || ||||||| ||| || ||||||
Sbjct: 182 acaacaccaaccaggttgatgatcaaaatggtcgttggtgggatcaaaagcgttgtccac 123
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtg 687
|||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||
Sbjct: 122 ttgaacatgtacagctccgcaaagtcaccgtcttcatctgaggcctttgaggtgacagtg 63
Query: 688 aagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgg 747
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 62 aagttggtgtcgataccggcaagcaccttgaggagaccctggaagacggcgaaaaggtgg 3
Query: 748 gc 749
||
Sbjct: 2 gc 1
Score = 89.7 bits (45), Expect = 2e-015
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 55 aactaacttatttctttgctgttcataacattacaaaactggtcctgtcagccactctcc 114
|||||||||||||||||| | ||||||||||||||||||| || ||||||| ||||||||
Sbjct: 705 aactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagacactctcc 647
Query: 115 acaaagtag 123
|||||||||
Sbjct: 646 acaaagtag 638
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 580 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 526
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 525 acaattggtggcagtggcacat 504
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 635 taacttatatcaacaaaagaatgca 611
>gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_23_E06_A010 3', mRNA sequence
Length = 633
Score = 519 bits (262), Expect = e-145
Identities = 364/398 (91%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 400 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 341
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 340 tgagtatctgggccagtgacacgggtggtgaacgggtcgatgcgaacccacagcaaggag 281
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 aagatcgacgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 221
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
|||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 220 cccatgagacccttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 161
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| ||||| || ||||| || ||||| ||||||||||| || |||||||| || |||
Sbjct: 160 ttgccaaagagtgggccccatgattggtaaccgctgttgatcgcataggagataccagca 101
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || |||||||||||||| || ||||||
Sbjct: 100 acaacaccaaccaggttgatgatcagaatggtcgttggcgggatcagaagggttgtccac 41
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatc 665
|||||||||||||||||||| ||||| |||||||||||
Sbjct: 40 ttgaacatgtacagctccgcaaagtcaccgtcttcatc 3
Score = 101 bits (51), Expect = 5e-019
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || ||||||||||
Sbjct: 629 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagcca 571
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 570 ctctccacaaagtag 556
Score = 81.8 bits (41), Expect = 4e-013
Identities = 73/82 (89%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 498 tatcccctggtctgtacgtagctgtaaataacgccacctgcc--tataact---taacag 444
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 443 acaattggtggcagtggcacat 422
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 553 taacttatatcaacaaaagaatgca 529
>gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 3', mRNA sequence
Length = 615
Score = 513 bits (259), Expect = e-143
Identities = 370/407 (90%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 410 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 351
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 350 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 291
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
|||||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 290 aagatcgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 231
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 230 cccatgagacctttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 171
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || |||
Sbjct: 170 ttgccaaagagcgggccccatgattggtaaccgctgttgatcgcgtaggagataccagca 111
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || || ||||||||||| || ||||||
Sbjct: 110 acaacaccaaccaggttgatgatcagaatggtcgttggtgggatcagaagcgttgtccac 51
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggcctt 674
|||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 50 ttgaacatgtacagctccgcaaagtcaccgtcttcatctgaggcctt 4
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 507 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 453
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 452 acaattggtggcagtggcacat 431
Score = 63.9 bits (32), Expect = 1e-007
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 76 ttcataacattacaaaactggtcctgtcagccactctccacaaagtag 123
||||||||||||||||||| ||| |||||| |||||||||||||||||
Sbjct: 611 ttcataacattacaaaactcgtc-tgtcagacactctccacaaagtag 565
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 562 taacttatatcaacaaaagaatgca 538
>gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 496 bits (250), Expect = e-138
Identities = 361/398 (90%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 401 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 342
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 341 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 282
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 281 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 222
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 221 cccatgagacctttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 162
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || |||
Sbjct: 161 ttgccaaagagcgggccccatgattggtaaccgctgttgatcgcgtaggagataccagca 102
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || || ||||||||||| || ||||||
Sbjct: 101 acaacaccaaccaggttgatgatcagaatggtcgttggtgggatcagaagcgttgtccac 42
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatc 665
|||||||||||||||||||| ||||| |||||||||||
Sbjct: 41 ttgaacatgtacagctccgcaaagtcaccgtcttcatc 4
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 499 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 445
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 444 acaattggtggcagtggcacat 423
Score = 63.9 bits (32), Expect = 1e-007
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 76 ttcataacattacaaaactggtcctgtcagccactctccacaaagtag 123
||||||||||||||||||| ||| |||||| |||||||||||||||||
Sbjct: 603 ttcataacattacaaaactcgtc-tgtcagacactctccacaaagtag 557
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 554 taacttatatcaacaaaagaatgca 530
>gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_G11_A012 3', mRNA sequence
Length = 616
Score = 492 bits (248), Expect = e-136
Identities = 347/380 (91%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 383 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 324
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 tgagtatctgggccagtgacacgggtggtgaacgggtcgatgcgaacccacagcaaggag 264
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 263 aagatcgacgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 204
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
|||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 203 cccatgagacccttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 144
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| ||||| || ||||| || ||||| ||||||||||| || |||||||| || |||
Sbjct: 143 ttgccaaagagtgggccccatgattggtaaccgctgttgatcgcataggagataccagca 84
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || |||||||||| ||| || ||||||
Sbjct: 83 acaacaccaaccaggttgatgatcagaatggtcgttggcgggatcaaaagggttgtccac 24
Query: 628 ttgaacatgtacagctccgc 647
||||||||||||||||||||
Sbjct: 23 ttgaacatgtacagctccgc 4
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||| ||||||| | ||||||||||||||||||| || ||||||||||
Sbjct: 612 aatgcaaactaacttacttctttgttcttcataacattacaaaactcgt-ctgtcagcca 554
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 553 ctctccacaaagtag 539
Score = 81.8 bits (41), Expect = 4e-013
Identities = 73/82 (89%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 481 tatcccctggtctgtacgtagctgtaaataacgccacctgcc--tataact---taacag 427
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 426 acaattggtggcagtggcacat 405
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 536 taacttatatcaacaaaagaatgca 512
>gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 616
Score = 470 bits (237), Expect = e-130
Identities = 348/385 (90%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 385 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 326
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 325 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 266
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 206
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||||||||| |||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 205 cccatgagacctttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 146
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| |||||||| ||||| || || || ||||||||||| ||||||||||| || |||
Sbjct: 145 ttgccaaagagcgggccccatgattgataaccgctgttgatcgcgtaggagataccagca 86
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
||||| || ||||||||||||||||| ||||| || || ||||||||||| || ||||||
Sbjct: 85 acaacaccaaccaggttgatgatcagaatggtcgttggtgggatcagaagcgttgtccac 26
Query: 628 ttgaacatgtacagctccgcgaagt 652
|||||||||||||||||||| ||||
Sbjct: 25 ttgaacatgtacagctccgcaaagt 1
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || ||||||| ||
Sbjct: 614 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagaca 556
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 555 ctctccacaaagtag 541
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 483 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 429
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 428 acaattggtggcagtggcacat 407
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 538 taacttatatcaacaaaagaatgca 514
>gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 3', mRNA sequence
Length = 579
Score = 432 bits (218), Expect = e-118
Identities = 313/345 (90%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||| | |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 345 tcgtggtgtttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 286
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 285 tgagtatctgggccagtgacacgggtggtgaacgggtcgatgcgaacccacagcaaggag 226
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
|||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 225 aagatcgacgccnacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 166
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
|||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct: 165 cccatgagacccttgaggaatgggtacaagtgcacaatcacccagaaggcgaagaagagc 106
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
||||| ||||| || ||||| || ||||| ||||||||||| || |||||||| || |||
Sbjct: 105 ttgccaaagagtgggccccatgattggtaaccgctgttgatcgcataggagataccagca 46
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
||||| || ||||||||||||||||| ||||| || |||||||||
Sbjct: 45 acaacaccaaccaggttgatgatcagaatggtcgttggcgggatc 1
Score = 93.7 bits (47), Expect = 1e-016
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| ||||||||||||||||||| | ||||||||||||||||||| || |||||||||
Sbjct: 574 aatgcaaactaacttatttctttgttcttcataacattacaaaactcgt-atgtcagcca 516
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 515 ctctccacaaagtag 501
Score = 81.8 bits (41), Expect = 4e-013
Identities = 73/82 (89%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 443 tatcccctggtctgtacgtagctgtaaataacgccacctgcc--tataact---taacag 389
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 388 acaattggtggcagtggcacat 367
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 498 taacttatatcaacaaaagaatgca 474
>gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 473
Score = 418 bits (211), Expect = e-114
Identities = 398/461 (86%)
Strand = Plus / Minus
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
|||||||||||||||||||||||||| ||||| |||||||| || || ||||| || |||
Sbjct: 472 tggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgccgtca 413
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggta 2064
||||| || |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 412 acgtcaaggcctccactgtgacntaggaaaacctgaatcattccaggatggtccctagta 353
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttttgt 2124
||||| | ||||| ||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 352 ttgttcncaggccaaggtgtaccatcttgcatgatccatccctcctcaggaactttttgt 293
Query: 2125 gccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatggcc 2184
||||| || || ||| |||| | | | |||||||||||||||||||||||||||||||
Sbjct: 292 gccttggctactagggcattgatacggactttgaattcttcatattctctcttcatggcc 233
Query: 2185 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2244
||||| ||||| |||||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 232 cggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagca 173
Query: 2245 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccatttt 2304
|||||||| || || || ||||| || ||||||||||||||| ||||| |||||||||
Sbjct: 172 aagtaccactctggggccctaggctctatgttgtacttcttacagaatggaacccatttt 113
Query: 2305 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatcatca 2364
||||||||||||||||| |||| || |||||||| |||||||||||||| |||||||||
Sbjct: 112 ctagcaaactctgaagtttcagagagcgcatcaaaagtcagcatagcagccccatcatca 53
Query: 2365 gatacatagcaagagaccttatccacaggatagtccacagc 2405
|| ||||||||||| ||||| || || |||||||| |||||
Sbjct: 52 gaaacatagcaagataccttgtcaaccggatagtcaacagc 12
>gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 777
Score = 371 bits (187), Expect = e-100
Identities = 420/497 (84%), Gaps = 3/497 (0%)
Strand = Plus / Minus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||| ||||||||| || |||||||| | | ||||| || || ||||| ||
Sbjct: 549 acccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtgggc 490
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | |||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 489 gtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccag 430
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
|| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 429 aatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcg 370
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
| |||||||||||| || ||||||| | ||||||||| || | ||||||||||||||
Sbjct: 369 tcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatg 310
Query: 613 agaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gag 669
|| || || ||||||||||| ||| ||||| ||||| ||| |||| || || | |
Sbjct: 309 aggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtg 250
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 249 gccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgc 190
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
| |||||||||||| || || || | ||| ||||||||||||||||||||||||||||||
Sbjct: 189 acgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccac 130
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
||||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||| ||
Sbjct: 129 cactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggac 70
Query: 850 atgaagagagagatgaa 866
|||||||| | ||||||
Sbjct: 69 atgaagagcgcgatgaa 53
>gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500738, DNA
sequence
Length = 854
Score = 371 bits (187), Expect = e-100
Identities = 420/497 (84%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||| ||||||||| || |||||||| | | ||||| || || ||||| ||
Sbjct: 188 acccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtgggc 247
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | |||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 248 gtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccag 307
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
|| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 308 aatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcg 367
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
| |||||||||||| || ||||||| | ||||||||| || | ||||||||||||||
Sbjct: 368 tcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatg 427
Query: 613 agaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gag 669
|| || || ||||||||||| ||| ||||| ||||| ||| |||| || || | |
Sbjct: 428 aggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtg 487
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 488 gccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgc 547
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
| |||||||||||| || || || | ||| ||||||||||||||||||||||||||||||
Sbjct: 548 acgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccac 607
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
||||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||| ||
Sbjct: 608 cactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggac 667
Query: 850 atgaagagagagatgaa 866
|||||||| | ||||||
Sbjct: 668 atgaagagcgcgatgaa 684
>gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 685
Score = 371 bits (187), Expect = e-100
Identities = 420/497 (84%), Gaps = 3/497 (0%)
Strand = Plus / Minus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||| ||||||||| || |||||||| | | ||||| || || ||||| ||
Sbjct: 509 acccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtgggc 450
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | |||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 449 gtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccag 390
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
|| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 389 aatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcg 330
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
| |||||||||||| || ||||||| | ||||||||| || | ||||||||||||||
Sbjct: 329 tcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatg 270
Query: 613 agaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gag 669
|| || || ||||||||||| ||| ||||| ||||| ||| |||| || || | |
Sbjct: 269 aggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtg 210
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 209 gccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgc 150
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
| |||||||||||| || || || | ||| ||||||||||||||||||||||||||||||
Sbjct: 149 acgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccac 90
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
||||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||| ||
Sbjct: 89 cactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggac 30
Query: 850 atgaagagagagatgaa 866
|||||||| | ||||||
Sbjct: 29 atgaagagcgcgatgaa 13
>gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 686
Score = 365 bits (184), Expect = 2e-098
Identities = 363/422 (86%), Gaps = 3/422 (0%)
Strand = Plus / Minus
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
|||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 680 cccatgagccccttgaggaacgggtagaggtggacgatgacccagaatgcgaagaagagc 621
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
|||||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||
Sbjct: 620 ttgccgaagagcgggccccatgactggtacccgttgttgatggcgtcggagatgccggcc 561
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccac 627
|| ||||||| | ||||||||| || | |||||||||||||| || || || ||||||
Sbjct: 560 acgacgccgatgatgttgatgatgagcagcgtggtgggcgggatgaggagcgtggtccac 501
Query: 628 ttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gaggccttggaggtgacg 684
||||| ||| ||||| ||||| ||| |||| || || | ||||||||||||||||
Sbjct: 500 ttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtggccttggaggtgacg 441
Query: 685 gtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagagg 744
||||||||||||||||| || || || |||||||| |||||||| | ||||||||||||
Sbjct: 440 gtgaagttggtgtcgatccctgccaggaccttgagcaggccctgcacgacggcgaagaga 381
Query: 745 tgggcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgccc 804
|| || || | ||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 380 tgcgccgacacgccgccgatgacccagaactgctcgttcctccaccactcctcgatgctc 321
Query: 805 acgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaagagagagatg 864
|| |||||||||| |||||||||||| ||||| |||||||| || |||||||| | ||||
Sbjct: 320 accccgctccaccgcatctccaggatgcccgtcgcgaagatggacatgaagagcgcgatg 261
Query: 865 aa 866
||
Sbjct: 260 aa 259
Score = 73.8 bits (37), Expect = 1e-010
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 898 atgatgaacttccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcggg 957
||||||||||| || ||||| ||||| | ||| || ||| ||||||| ||| ||||||
Sbjct: 125 atgatgaacttgccggtgaggaggcatacggcggggagggtacagtaggcgagcagcggg 66
Query: 958 agggacgtgagcgggtagatggtggtgttgatgtaggcgaa 998
|| || |||| |||||||||||||||||||||||||||||
Sbjct: 65 agcgaggtgaaagggtagatggtggtgttgatgtaggcgaa 25
>gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 601
Score = 361 bits (182), Expect = 3e-097
Identities = 412/488 (84%), Gaps = 3/488 (0%)
Strand = Plus / Plus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||| ||||||||| || |||||||| | | ||||| || || ||||| ||
Sbjct: 107 acccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtgggc 166
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | |||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 167 gtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccag 226
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
|| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 227 aatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcg 286
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
| |||||||||||| || ||||||| | ||||||||| || | ||||||||||||||
Sbjct: 287 tcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatg 346
Query: 613 agaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gag 669
|| || || ||||||||||| ||| ||||| ||||| ||| |||| || || | |
Sbjct: 347 aggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtg 406
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 407 gccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgc 466
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
| ||| |||||||| || || || | ||| ||||||||||||||||||||||||||||||
Sbjct: 467 acgacagcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccac 526
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
||||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||| ||
Sbjct: 527 cactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggac 586
Query: 850 atgaagag 857
||||||||
Sbjct: 587 atgaagag 594
>gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 361 bits (182), Expect = 3e-097
Identities = 370/432 (85%), Gaps = 3/432 (0%)
Strand = Plus / Minus
Query: 438 gttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggc 497
|||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||| || ||
Sbjct: 482 gttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccataatgc 423
Query: 498 gaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtagga 557
|||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||
Sbjct: 422 gaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcgtcgga 363
Query: 558 gatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaag 617
||||||||| || ||||||| | ||||||||| || | |||||||||||||| || ||
Sbjct: 362 gatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatgaggag 303
Query: 618 tgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc---gaggcctt 674
|| ||||||||||| ||| ||||| ||||| ||| |||| || || | ||||||
Sbjct: 302 cgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtggcctt 243
Query: 675 ggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagac 734
||||||||||||||||||||||||||| || || || |||||||| |||||||| | |||
Sbjct: 242 ggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgcacgac 183
Query: 735 ggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccactc 794
||||||||| || || || | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 182 ggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctccaccactc 123
Query: 795 gtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaa 854
||||||| ||| |||||||||| |||||||||||| ||||| |||||||| || |||||
Sbjct: 122 ctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatggacatgaa 63
Query: 855 gagagagatgaa 866
||| | ||||||
Sbjct: 62 gagcgcgatgaa 51
>gb|BG241798.1|BG241798 RHIZ2_50_D01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 222
Score = 361 bits (182), Expect = 3e-097
Identities = 206/214 (96%)
Strand = Plus / Minus
Query: 3090 gactgacgggatgtatccccgagggatctcaccactgtcgtacttggtaagcccgatctc 3149
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 222 gactgacgggatgtatcccccagggatctcaccactgtcatacttggtaagcccgatctc 163
Query: 3150 accactgtcatacttggggcggccaacatccccgctgcccccagcattcatgcgccagct 3209
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 162 gccactgtcatacttggggcggccaacatccccgctgcccccagcgttcatgcgccagct 103
Query: 3210 gcgcatcctgtcagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaa 3269
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 102 gcgcatcctgtcagcaatcttctgcttctggtcatcgttgccagatgcagggtagttgaa 43
Query: 3270 gtcgctagcatcatcggcatcagtatcgtctcct 3303
|||||||||||||||||||||||| || ||||||
Sbjct: 42 gtcgctagcatcatcggcatcagtttcatctcct 9
>gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940114, DNA
sequence
Length = 564
Score = 359 bits (181), Expect = 1e-096
Identities = 199/205 (97%)
Strand = Plus / Minus
Query: 1242 ctcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttcttt 1301
|||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 454 ctcagttccccattcagtcttgtcctcatagccacaacttataacatggatagcttcttt 395
Query: 1302 cagaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtggacgc 1361
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 394 cagaagagattccggagttgcagactgaggaacaccaccatattccatcagagtggaggc 335
Query: 1362 aacaaaagctgcagattggccaaatctcttctccaagctcatttgagacataagaagtga 1421
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacaaaagctgcagattgaccaaatctcttctccaagctcatttgagacataagaagtga 275
Query: 1422 tttctcatcatcaaatccagcgcct 1446
|||||||||||||||||||||||||
Sbjct: 274 tttctcatcatcaaatccagcgcct 250
Score = 167 bits (84), Expect = 9e-039
Identities = 90/92 (97%)
Strand = Plus / Minus
Query: 1444 ccttcaactccctcctctatatcttcaagattgaatactggcacagaactgtccacatgc 1503
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 116 ccttcaactccctcctctatatcttcgagattgaatactggcacagaactgtccacatgc 57
Query: 1504 ttctgtgactttttcttgtctgagcccttctt 1535
||||||||||||||||||||||||||| ||||
Sbjct: 56 ttctgtgactttttcttgtctgagcccctctt 25
>gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 355 bits (179), Expect = 2e-095
Identities = 359/419 (85%)
Strand = Plus / Minus
Query: 1117 ttgatgggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccag 1176
||||| ||||| |||||||||| || || |||||||||||||||||||| || ||||||
Sbjct: 442 ttgataggagcagatcccttgacagctggtcgcttaggcatgcagtagattgatcgccag 383
Query: 1177 cctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccac 1236
||||| || ||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 382 cctcgagcatgcatcttgaatccagtgagaatatcttctgtaacagaaccatagatccat 323
Query: 1237 ccaatctcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagct 1296
|| |||||||||||||| ||| | |||||||| |||||||| || |||||||| ||||||
Sbjct: 322 ccgatctcagttccccagtcagttttgtcctcatagccacagctgatgacatgaatagct 263
Query: 1297 tctttcagaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtg 1356
|||||||||||||| || ||||| ||||| || |||||||| ||||||||||| || |||
Sbjct: 262 tctttcagaagagactctggagttgcagattgtggaacaccgccatattccataagggtg 203
Query: 1357 gacgcaacaaaagctgcagattggccaaatctcttctccaagctcatttgagacataaga 1416
|| || |||||| | || ||||||||||||||||||| |||||||||||||||||
Sbjct: 202 gaggctacaaaaacactggactggccaaatctcttctccaggctcatttgagacataatc 143
Query: 1417 agtgatttctcatcatcaaatccagcgccttcaactccctcctctatatcttcaagattg 1476
|| |||||||||||||||||| || ||||||| || ||||||||||||||||||||
Sbjct: 142 agcgatttctcatcatcaaattgagaaccttcaatcccttcctctatatcttcaagatta 83
Query: 1477 aatactggcacagaactgtccacatgcttctgtgactttttcttgtctgagcccttctt 1535
|||||||| ||||||||||| | || | |||||||| ||||| ||||||| ||||||
Sbjct: 82 aatactggtacagaactgtctgcgtgtctgtgtgacttcttcttttctgagctcttctt 24
>gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 461
Score = 331 bits (167), Expect = 3e-088
Identities = 212/227 (93%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 227 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 168
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 167 tgagtatctgggccagtgacacgggtggtgaacgggtcgatgcgaacccacagcaaggag 108
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 107 aagatcgacgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 48
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaa 494
|||||||||||||||||||| ||||||| ||| || |||||||||||
Sbjct: 47 cccatgagacccttgaggaatgggtacaagtgcacaatcacccagaa 1
Score = 107 bits (54), Expect = 8e-021
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 54 aaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagccactctc 113
||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct: 451 aaactaacttatttctttgctcttcataacattacaaaactcgt-ctgtcagccactctc 393
Query: 114 cacaaagtag 123
||||||||||
Sbjct: 392 cacaaagtag 383
Score = 73.8 bits (37), Expect = 1e-010
Identities = 72/82 (87%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||||| |||||||||| ||||||| ||||||
Sbjct: 325 tatcccctggtctgtacgtagctgtaaataaggccacctgcc--tataact---taacag 271
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 270 acaattggtggcagtggcacat 249
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 380 taacttatatcaacaaaagaatgca 356
>gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10434936, DNA sequence
Length = 549
Score = 323 bits (163), Expect = 7e-086
Identities = 187/195 (95%)
Strand = Plus / Plus
Query: 3328 cccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgc 3387
||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||||
Sbjct: 192 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 251
Query: 3388 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 3447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 311
Query: 3448 tctccctccgccgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccg 3507
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 312 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccg 371
Query: 3508 cgcctccccgacttc 3522
|||||||||||||||
Sbjct: 372 cgcctccccgacttc 386
Score = 91.7 bits (46), Expect = 4e-016
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 3522 cacgccgtccgcgtcgccctccatggcaggcgagctcgcccagaaccgac 3571
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 488 cacgccgtccgcgtcgccctccatggcaggcgagctcgccaagaaccgac 537
>gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039j12, DNA
sequence
Length = 726
Score = 323 bits (163), Expect = 7e-086
Identities = 187/195 (95%)
Strand = Plus / Minus
Query: 3328 cccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgc 3387
||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||||
Sbjct: 340 cccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtccttgcgc 281
Query: 3388 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 3447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tcgtactcgtagcaggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacg 221
Query: 3448 tctccctccgccgtagtgcccacgccatcgccgcagatctggcacacctgccctcccccg 3507
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 220 tccccctccgccgtggtgcccacgccgtcgccgcagatctggcacacctgcccgcccccg 161
Query: 3508 cgcctccccgacttc 3522
|||||||||||||||
Sbjct: 160 cgcctccccgacttc 146
Score = 79.8 bits (40), Expect = 2e-012
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 3522 cacgccgtccgcgtcgccctccatggcaggcgagctcgcc 3561
||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cacgccgtccgcgtcgccctccatggcaggcgagctcgcc 5
>gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 621
Score = 321 bits (162), Expect = 3e-085
Identities = 429/518 (82%)
Strand = Plus / Plus
Query: 340 ccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggagaagatcgacgcc 399
|||||||| ||||||||||| |||||||| ||||||||||||| ||| || ||||| ||
Sbjct: 66 ccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgatgca 125
Query: 400 agcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgagaccc 459
|| ||| | ||||| |||| || |||||||| |||||||||||| |||||||| |||
Sbjct: 126 aggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatgaggccc 185
Query: 460 ttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaagagc 519
|||||||| ||||||| ||| || ||||||||||| |||||||||||||| || || ||
Sbjct: 186 ttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttcccaaaaaga 245
Query: 520 ggaccccacgactggtacccgctgttgatggcgtaggagatgccggcaacaacgccgacc 579
|| ||||| |||||||| || || ||||| || ||||| |||| ||||| || |||| |
Sbjct: 246 ggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccgatc 305
Query: 580 aggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccacttgaacatgtac 639
|||||||| |||| || ||||| || ||||||||||| || |||||||||||||||||
Sbjct: 306 aggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 365
Query: 640 agctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtgaagttggtgtcg 699
||||| || || || || |||||||| | |||||| |||||||| |||||| | |||||
Sbjct: 366 agctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtgtca 425
Query: 700 atgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgggcggagatgcct 759
|| || ||||||||||| ||||| |||||||||||||| || | || || || || ||
Sbjct: 426 ataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaaatacca 485
Query: 760 ccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccacctc 819
|| || ||||| |||||||||||||||||||| || || ||||| || || |||||||||
Sbjct: 486 ccaataacccaaaactgctcgttcctccaccattcatcaatgccaacaccactccacctc 545
Query: 820 atctccaggatacccgtggcgaagatcgagatgaagag 857
||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 546 atctcaaggataccagtggcaaagatcgagataaagag 583
>gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 3', mRNA sequence
Length = 743
Score = 321 bits (162), Expect = 3e-085
Identities = 429/518 (82%)
Strand = Plus / Minus
Query: 340 ccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggagaagatcgacgcc 399
|||||||| ||||||||||| |||||||| ||||||||||||| ||| || ||||| ||
Sbjct: 532 ccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgatgca 473
Query: 400 agcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgagaccc 459
|| ||| | ||||| |||| || |||||||| |||||||||||| |||||||| |||
Sbjct: 472 aggagggtagcccatacaagaacaatggtcggcgtgcggttctgcttccccatgaggccc 413
Query: 460 ttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaagagc 519
|||||||| ||||||| ||| || ||||||||||| |||||||||||||| || || ||
Sbjct: 412 ttgaggaaggggtacaagtggacaatcacccagaacgcgaagaagagcttcccaaaaaga 353
Query: 520 ggaccccacgactggtacccgctgttgatggcgtaggagatgccggcaacaacgccgacc 579
|| ||||| |||||||| || || ||||| || ||||| |||| ||||| || |||| |
Sbjct: 352 ggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccgatc 293
Query: 580 aggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccacttgaacatgtac 639
|||||||| |||| || ||||| || ||||||||||| || |||||||||||||||||
Sbjct: 292 aggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 233
Query: 640 agctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtgaagttggtgtcg 699
||||| || || || || |||||||| | |||||| |||||||| |||||| | |||||
Sbjct: 232 agctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtgtca 173
Query: 700 atgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgggcggagatgcct 759
|| || ||||||||||| ||||| |||||||||||||| || | || || || || ||
Sbjct: 172 ataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaaatacca 113
Query: 760 ccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccacctc 819
|| || ||||| |||||||||||||||||||| || || ||||| || || |||||||||
Sbjct: 112 ccaataacccaaaactgctcgttcctccaccattcatcaatgccaacaccactccacctc 53
Query: 820 atctccaggatacccgtggcgaagatcgagatgaagag 857
||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 52 atctcaaggataccagtggcaaagatcgagataaagag 15
>gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 295 bits (149), Expect = 2e-077
Identities = 206/225 (91%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 225 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 166
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 165 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 106
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 105 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 46
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
||||||||||| |||||||| ||||||| ||| || |||||||||
Sbjct: 45 cccatgagacctttgaggaatgggtacaagtgcacaatcacccag 1
Score = 89.7 bits (45), Expect = 2e-015
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 55 aactaacttatttctttgctgttcataacattacaaaactggtcctgtcagccactctcc 114
|||||||||||||||||| | ||||||||||||||||||| || ||||||| ||||||||
Sbjct: 448 aactaacttatttctttgttcttcataacattacaaaactcgt-ctgtcagacactctcc 390
Query: 115 acaaagtag 123
|||||||||
Sbjct: 389 acaaagtag 381
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 323 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 269
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 268 acaattggtggcagtggcacat 247
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 378 taacttatatcaacaaaagaatgca 354
>gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_E06_A002 3', mRNA sequence
Length = 458
Score = 291 bits (147), Expect = 2e-076
Identities = 204/223 (91%)
Strand = Plus / Minus
Query: 268 tcgtggtatctctctgtttctacaaaccttccacctccctagcagttgatgccacacgtt 327
||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 223 tcgtggtatttctctgtttctacaaaccttccactttcctagcagttgatgccacatgtt 164
Query: 328 cgagtatccgggccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggag 387
||||||| ||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 163 tgagtatctgggccagtgacacgggtggtgaacgggtctatgcgaacccacagcaaggag 104
Query: 388 aagatcgacgccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccga 447
||||| || |||| |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 103 aagattgatgccaacaggattgcccagacaaccacgatggtcggggtgcggttttgccga 44
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcaccc 490
||||||||||| |||||||| ||||||| ||| || |||||||
Sbjct: 43 cccatgagacctttgaggaatgggtacaagtgcacaatcaccc 1
Score = 85.7 bits (43), Expect = 3e-014
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 49 aatggaaactaacttatttctttgctgttcataacattacaaaactggtcctgtcagcca 108
|||| |||||||||||||||| || | ||||||||||||||||||| || ||||||| ||
Sbjct: 452 aatgcaaactaacttatttctctgttcttcataacattacaaaactcgt-ctgtcagaca 394
Query: 109 ctctccacaaagtag 123
|||||||||||||||
Sbjct: 393 ctctccacaaagtag 379
Score = 65.9 bits (33), Expect = 3e-008
Identities = 71/82 (86%), Gaps = 5/82 (6%)
Strand = Plus / Minus
Query: 186 tatccccttgtgtgtacgtagctgtaaataacgccacctgcctatataacttactaacag 245
|||||||| || ||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 321 tatcccctggtctgtacgtagctgtaaatgacgccacctgc--ttataact---taacag 267
Query: 246 acaatttgtggcagcggcacat 267
|||||| ||||||| |||||||
Sbjct: 266 acaattggtggcagtggcacat 245
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 taacttatatcaacaaaagaatgca 167
|||||||||||||||||||||||||
Sbjct: 376 taacttatatcaacaaaagaatgca 352
>gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112l18, DNA
sequence
Length = 427
Score = 281 bits (142), Expect = 2e-073
Identities = 345/412 (83%), Gaps = 3/412 (0%)
Strand = Plus / Minus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||| ||||||||| || |||||||| | | ||||| || || ||||| ||
Sbjct: 412 acccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtgggc 353
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | |||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 352 gtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacccag 293
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
|| |||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 292 aatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggcg 233
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatc 612
| |||||||||||| || ||||||| | ||||||||| || | ||||||||||||||
Sbjct: 232 tcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggatg 173
Query: 613 agaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat---ccgag 669
|| || || ||||||||||| ||| ||||| ||||| ||| |||| || | | | |
Sbjct: 172 aggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggtg 113
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 112 gccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctgc 53
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgt 781
| |||||||||||| || || || | ||| ||||||||||||||||||||||
Sbjct: 52 acgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgt 1
>gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_32_H10_A002 5', mRNA sequence
Length = 352
Score = 280 bits (141), Expect = 9e-073
Identities = 191/205 (93%), Gaps = 2/205 (0%)
Strand = Plus / Minus
Query: 3435 ggcggtgaagacgtctccctccgccgtagtgcccacgccatcgccgcagatctggcacac 3494
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 210 ggcggtgaagacgtccccctccgccgtggtgcccacgccgtcgccgcagatctggcacac 151
Query: 3495 ctgccctcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcga 3554
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ctgcccgcccccgcgcctccccgacttcacgccgtccgcgtcgccctccatggcaggcga 91
Query: 3555 gctcgcccagaaccgac-aaggagctggcctaggcagagccgaagcgacac-aagtcggc 3612
||||||| ||||||||| | |||||| |||| || |||||||| |||||| ||| ||||
Sbjct: 90 gctcgccaagaaccgacgagggagctagcctgggtagagccgagccgacacgaagccggc 31
Query: 3613 accactcccgagatccgagcagggg 3637
|||||||||||||||||||||||||
Sbjct: 30 accactcccgagatccgagcagggg 6
Score = 204 bits (103), Expect = 4e-050
Identities = 136/147 (92%)
Strand = Plus / Minus
Query: 3262 tagttgaagtcgctagcatcatcggcatcagtatcgtctccttcctcccctcggatcgct 3321
|||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 352 tagttgaagtcgctagcatcatcggcatcagtttcatctccttcctccccgcggatcgcc 293
Query: 3322 ggactccccttgtggcgcttgtacttgtttttgcactgggggcacgcttgtgtgccgtcc 3381
|| |||||||||||||||||||||||| | ||||||||||||||||| || |||||||||
Sbjct: 292 gggctccccttgtggcgcttgtacttggtcttgcactgggggcacgcctgcgtgccgtcc 233
Query: 3382 ttgcgctcgtactcgtagcaggggcgg 3408
|||||||||||| |||||||||||||
Sbjct: 232 ctgcgctcgtacttgtagcaggggcgg 206
>gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152044, DNA
sequence
Length = 606
Score = 262 bits (132), Expect = 2e-067
Identities = 314/374 (83%), Gaps = 3/374 (0%)
Strand = Plus / Plus
Query: 418 accacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacagg 477
||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 54 accacgatggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacagg 113
Query: 478 tgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtac 537
|| | ||||||||| | ||||||||| | |||||| ||||| || ||||| |||| |||
Sbjct: 114 tgcatgatcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtag 173
Query: 538 ccgctgttgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatg 597
|||||||||| ||| |||| ||| || || ||||| |||| ||||| | |||||||
Sbjct: 174 ccgctgttgagcgcggccgagaagccagccaccacgcccaccatgttgagcaccaggatg 233
Query: 598 gtggtgggcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccg 657
|||||||||||||||| | |||||||||||||||| |||||||||| |||| ||| ||
Sbjct: 234 ctggtgggcgggatcagcaccgtcgtccacttgaacacgtacagctccccgaactcggcg 293
Query: 658 tcttcatccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttg 717
|| |||| |||||| | |||||| |||||||||||||| | ||||||| || ||||
Sbjct: 294 ---tcgtccgtggcctttgcggtgaccgtgaagttggtgtccagcccggcaatcatcttg 350
Query: 718 aggaggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgc 777
|| | |||||||| |||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 351 agaataccctggaacacggcgaacaggtgggcggacacgcctccgatgacccagaactgc 410
Query: 778 tcgttcctccacca 791
||||| | ||||||
Sbjct: 411 tcgttgcgccacca 424
>gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203928, DNA
sequence
Length = 714
Score = 262 bits (132), Expect = 2e-067
Identities = 314/374 (83%), Gaps = 3/374 (0%)
Strand = Plus / Plus
Query: 418 accacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacagg 477
||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 51 accacgatggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacagg 110
Query: 478 tgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtac 537
|| | ||||||||| | ||||||||| | |||||| ||||| || ||||| |||| |||
Sbjct: 111 tgcatgatcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtag 170
Query: 538 ccgctgttgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatg 597
|||||||||| ||| |||| ||| || || ||||| |||| ||||| | |||||||
Sbjct: 171 ccgctgttgagcgcggccgagaagccagccaccacgcccaccatgttgagcaccaggatg 230
Query: 598 gtggtgggcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccg 657
|||||||||||||||| | |||||||||||||||| |||||||||| |||| ||| ||
Sbjct: 231 ctggtgggcgggatcagcaccgtcgtccacttgaacacgtacagctccccgaactcggcg 290
Query: 658 tcttcatccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttg 717
|| |||| |||||| | |||||| |||||||||||||| | ||||||| || ||||
Sbjct: 291 ---tcgtccgtggcctttgcggtgaccgtgaagttggtgtccagcccggcaatcatcttg 347
Query: 718 aggaggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgc 777
|| | |||||||| |||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 348 agaataccctggaacacggcgaacaggtgggcggacacgcctccgatgacccagaactgc 407
Query: 778 tcgttcctccacca 791
||||| | ||||||
Sbjct: 408 tcgttgcgccacca 421
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 901 atgaacttccccgtgagcaggcagatggcaggcagg 936
|||||||| || ||||||||||| ||||||||||||
Sbjct: 611 atgaactttcctgtgagcaggcaaatggcaggcagg 646
>gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_20_C10_A002 3', mRNA sequence
Length = 666
Score = 262 bits (132), Expect = 2e-067
Identities = 372/452 (82%)
Strand = Plus / Minus
Query: 340 ccagtgacgcgggtggtgaacggatcgatgcgaacccacagcaaggagaagatcgacgcc 399
|||||||| ||||||||||| |||||||| ||||||||||||| ||| || ||||| ||
Sbjct: 458 ccagtgacccgggtggtgaatggatcgatacgaacccacagcagggaaaatatcgatgca 399
Query: 400 agcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgagaccc 459
|| ||| | ||||| |||| || |||||||| |||||||||||| |||||||| |||
Sbjct: 398 aggagggtagcccatacaagaacaatggtcggtgtgcggttctgcttccccatgaggccc 339
Query: 460 ttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaagagc 519
|||||||| ||||||| ||| || |||||||||| |||||||||||||| || || ||
Sbjct: 338 ttgaggaaggggtacaagtggacagtcacccagaacgcgaagaagagcttcccaaaaaga 279
Query: 520 ggaccccacgactggtacccgctgttgatggcgtaggagatgccggcaacaacgccgacc 579
|| ||||| |||||||| || || ||||| || ||||| |||| ||||| || |||| |
Sbjct: 278 ggcccccatgactggtaaccactattgatcgcataggaagtgccagcaaccacaccgatc 219
Query: 580 aggttgatgatcaggatggtggtgggcgggatcagaagtgtcgtccacttgaacatgtac 639
|||||||| |||| || ||||| || ||||||||||| || |||||||||||||||||
Sbjct: 218 aggttgataatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 159
Query: 640 agctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtgaagttggtgtcg 699
||||| || || || || |||||||| | |||||| |||||||| |||||| | |||||
Sbjct: 158 agctcggcaaaatcaccttcttcatcagtggccttagaggtgacagtgaagctcgtgtca 99
Query: 700 atgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgggcggagatgcct 759
|| || ||||||||||| ||||| |||||||||||||| || | || || || || ||
Sbjct: 98 ataccagcaagcacctttaggagaccctggaagacggcaaataaatgcgcagaaatacca 39
Query: 760 ccgatgacccagaactgctcgttcctccacca 791
|| || ||||| ||||||||||||||||||||
Sbjct: 38 ccaataacccaaaactgctcgttcctccacca 7
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 246 bits (124), Expect = 1e-062
Identities = 529/664 (79%)
Strand = Plus / Minus
Query: 1915 gcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaaca 1974
|||||||| |||||||| ||||||||||||||||| || || | ||||||||||| |||
Sbjct: 674 gcattcattgcaccagccttcttgtgatgctggaagcctggtctcttttcacgagagaca 615
Query: 1975 tagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgaccaaggaaa 2034
||||| | ||| |||| ||||| || ||||| ||||||||||||||||| || | |||
Sbjct: 614 tagacaagacgcggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaac 555
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
||||||||||| |||||||||||||| | ||| || || ||||| | || ||||| |
Sbjct: 554 acctgaatcatgccaggatggtccctaggattattcccaggccaagcagttccatcagcc 495
Query: 2095 atgatccatccttcctcagggactttttgtgccttagcaacaaggccatttaccctaatt 2154
||| |||| || || ||||| ||||| ||||| || ||||||||| |||| | || | |
Sbjct: 494 atggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttact 435
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
|||||||||||||| ||||||||||| || || | || |||||||||||||| || | |
Sbjct: 434 ttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaatt 375
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|||||||||| |||||| ||||| || | ||||| |||| |||||||| ||||||||
Sbjct: 374 ttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaata 315
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
|||| ||||||| ||| || ||||| ||||||||||| |||| || || | || |
Sbjct: 314 ttgtgcttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagagac 255
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||||||||||||||| | ||||||||||| |||||||| || || || || |||||
Sbjct: 254 tcaaatgtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacaggg 195
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
|| |||||||| |||||||| | || || ||||| |||| || ||||| ||||||| |
Sbjct: 194 taatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaat 135
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2514
|| || || |||||||| || | |||| | ||||| ||| || ||||| || || |
Sbjct: 134 ggatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctcta 75
Query: 2515 tcataccttaatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttgga 2574
|||||||| ||||| || || ||||| || ||||| |||||||||||| |||| |||||
Sbjct: 74 tcatacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggg 15
Query: 2575 aact 2578
||||
Sbjct: 14 aact 11
>gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 412
Score = 242 bits (122), Expect = 2e-061
Identities = 278/330 (84%)
Strand = Plus / Minus
Query: 669 ggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctg 728
||||||||||||||||||||||||||||||||| || || || |||||||| ||||||||
Sbjct: 412 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 353
Query: 729 gaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctcca 788
| |||||||||||| || || || | ||| |||||||||||||||||||||||||||||
Sbjct: 352 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 293
Query: 789 ccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcga 848
|||||| ||||||| ||| |||||||||| |||||||||||| ||||| |||||||| ||
Sbjct: 292 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatgga 233
Query: 849 gatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaactt 908
|||||||| | |||||| | | || ||||| |||| ||| || |||||||||||
Sbjct: 232 catgaagagcgcgatgaagaacaagctggcgaacgtgctaatcgacggcatgatgaactt 173
Query: 909 ccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcgggagggacgtgag 968
|| ||||| ||||| | ||| || ||| ||||||| ||| |||||||| || ||||
Sbjct: 172 gccggtgaggaggcatacggcggggagggtacagtaggcgagcagcgggagcgaggtgaa 113
Query: 969 cgggtagatggtggtgttgatgtaggcgaa 998
|||||||||||||||||||||||||||||
Sbjct: 112 agggtagatggtggtgttgatgtaggcgaa 83
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 940,410
Number of Sequences: 832831
Number of extensions: 940410
Number of successful extensions: 262007
Number of sequences better than 0.5: 265
Number of HSP's better than 0.5 without gapping: 264
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 261212
Number of HSP's gapped (non-prelim): 690
length of query: 3782
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3761
effective length of database: 473,870,218
effective search space: 1782225889898
effective search space used: 1782225889898
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)