BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441327.2.1
(884 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE359585.1|BE359585 DG1_54_E06.g2_A002 Dark Grown 1 (DG1... 381 e-104
gb|BE352946.1|BE352946 DG1_1_F08.g1_A002 Dark Grown 1 (DG1)... 331 6e-089
gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1)... 287 9e-076
gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1)... 287 9e-076
gb|BE125671.1|BE125671 DG1_54_E06.b1_A002 Dark Grown 1 (DG1... 206 3e-051
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 147 2e-033
gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stres... 147 2e-033
gb|CN135950.1|CN135950 OX1_39_H10.g1_A002 Oxidatively-stres... 147 2e-033
gb|AW922444.1|AW922444 DG1_19_G02.g1_A002 Dark Grown 1 (DG1... 137 2e-030
gb|CW032162.1|CW032162 104_261_10501223_114_30363 Sorghum m... 135 8e-030
gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated... 133 3e-029
gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from s... 127 2e-027
gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorgh... 125 7e-027
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 125 7e-027
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 125 7e-027
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 125 7e-027
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 123 3e-026
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 123 3e-026
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 123 3e-026
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 123 3e-026
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 123 3e-026
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 123 3e-026
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 123 3e-026
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 123 3e-026
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 119 5e-025
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 119 5e-025
gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorgh... 117 2e-024
gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1... 117 2e-024
gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1... 117 2e-024
gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorgh... 115 7e-024
gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorgh... 115 7e-024
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 115 7e-024
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 115 7e-024
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 115 7e-024
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 115 7e-024
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 115 7e-024
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 115 7e-024
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 113 3e-023
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 113 3e-023
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 113 3e-023
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 113 3e-023
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 113 3e-023
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 113 3e-023
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 113 3e-023
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 113 3e-023
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 113 3e-023
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 113 3e-023
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 113 3e-023
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 113 3e-023
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 113 3e-023
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 111 1e-022
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 109 4e-022
gb|CW252633.1|CW252633 104_715_11224618_148_35091_033 Sorgh... 107 2e-021
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 105 7e-021
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 105 7e-021
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 105 7e-021
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 103 3e-020
gb|CW032163.1|CW032163 104_261_10501223_115_30364 Sorghum m... 101 1e-019
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 101 1e-019
gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorgh... 100 4e-019
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 100 4e-019
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 100 4e-019
gb|CW226216.1|CW226216 104_664_11204768_116_37222_030 Sorgh... 100 4e-019
gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorgh... 100 4e-019
gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation... 100 4e-019
gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sor... 100 4e-019
gb|BM323139.1|BM323139 PIC1_8_B06.b1_A002 Pathogen-infected... 100 4e-019
gb|BM323592.1|BM323592 PIC1_21_B02.b1_A002 Pathogen-infecte... 100 4e-019
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 100 4e-019
gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum m... 98 2e-018
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 98 2e-018
gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorgh... 98 2e-018
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 96 7e-018
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 96 7e-018
gb|BM323138.1|BM323138 PIC1_8_B05.b1_A002 Pathogen-infected... 96 7e-018
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 92 1e-016
gb|BE125495.1|BE125495 DG1_27_A01.b1_A002 Dark Grown 1 (DG1... 92 1e-016
gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1... 92 1e-016
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 92 1e-016
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 92 1e-016
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 90 4e-016
gb|CW139438.1|CW139438 104_529_11135238_116_34905_021 Sorgh... 90 4e-016
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 90 4e-016
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 90 4e-016
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 90 4e-016
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 90 4e-016
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 90 4e-016
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 90 4e-016
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 90 4e-016
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 90 4e-016
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 90 4e-016
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 90 4e-016
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 90 4e-016
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 90 4e-016
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 90 4e-016
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 90 4e-016
gb|CW103666.1|CW103666 104_472_11012013_148_34436_089 Sorgh... 86 6e-015
gb|CW141122.1|CW141122 104_532_11136149_148_34928_031 Sorgh... 86 6e-015
gb|CW177867.1|CW177867 104_591_11159260_116_36614_010 Sorgh... 86 6e-015
gb|CW467394.1|CW467394 fsbb001f219b03f0 Sorghum methylation... 86 6e-015
gb|CW173031.1|CW173031 104_584_11156623_116_36545_024 Sorgh... 84 3e-014
gb|CW252632.1|CW252632 104_715_11224618_116_35095_033 Sorgh... 84 3e-014
gb|CN142345.1|CN142345 WOUND1_9_A01.g1_A002 Wounded leaves ... 84 3e-014
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 82 1e-013
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 82 1e-013
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 82 1e-013
gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorgh... 82 1e-013
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 82 1e-013
gb|BE355802.1|BE355802 DG1_11_E04.b1_A002 Dark Grown 1 (DG1... 82 1e-013
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 82 1e-013
gb|CN129214.1|CN129214 RHOH1_34_D09.b3_A002 Acid- and alkal... 80 4e-013
gb|CN143544.1|CN143544 WOUND1_17_A02.b1_A002 Wounded leaves... 80 4e-013
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 78 2e-012
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 78 2e-012
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 78 2e-012
gb|AW286086.2|AW286086 LG1_261_C01.b1_A002 Light Grown 1 (L... 78 2e-012
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 78 2e-012
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 78 2e-012
gb|CN134563.1|CN134563 OX1_27_D04.b1_A002 Oxidatively-stres... 78 2e-012
gb|CN124361.1|CN124361 RHOH1_4_F03.b1_A002 Acid- and alkali... 76 6e-012
gb|CW292718.1|CW292718 104_772_11414235_116_35579_002 Sorgh... 74 2e-011
gb|CW415526.1|CW415526 fsbb001f115k18f0 Sorghum methylation... 74 2e-011
gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1)... 74 2e-011
gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1... 74 2e-011
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 74 2e-011
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 74 2e-011
gb|CN124436.1|CN124436 RHOH1_4_F03.g1_A002 Acid- and alkali... 74 2e-011
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 74 2e-011
gb|CN149135.1|CN149135 WOUND1_61_A02.b1_A002 Wounded leaves... 74 2e-011
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 72 1e-010
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 72 1e-010
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 72 1e-010
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 72 1e-010
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 72 1e-010
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 72 1e-010
gb|CX610689.1|CX610689 ANR1_20_F02.b1_A002 Anaerobic roots ... 72 1e-010
gb|CW124982.1|CW124982 104_505_11112086_116_34716_063 Sorgh... 70 4e-010
gb|CW219164.1|CW219164 104_653_11196585_148_37138_045 Sorgh... 70 4e-010
gb|BE358852.1|BE358852 DG1_32_D11.g1_A002 Dark Grown 1 (DG1... 70 4e-010
gb|CD428024.1|CD428024 ETH1_32_C09.b1_A002 Ethylene-treated... 70 4e-010
gb|CD430662.1|CD430662 ETH1_20_G03.b1_A002 Ethylene-treated... 70 4e-010
gb|CW024958.1|CW024958 104_226_10487881_116_30524 Sorghum m... 68 1e-009
gb|CW098399.1|CW098399 104_464_11002986_116_34363_065 Sorgh... 68 1e-009
gb|CW098400.1|CW098400 104_464_11002986_148_34367_065 Sorgh... 68 1e-009
gb|CW173032.1|CW173032 104_584_11156623_148_36546_024 Sorgh... 68 1e-009
gb|CW301982.1|CW301982 104_786_11464484_116_35663_080 Sorgh... 68 1e-009
gb|CW396435.1|CW396435 fsbb001f084n24f0 Sorghum methylation... 68 1e-009
gb|CW404467.1|CW404467 fsbb001f096j23f0 Sorghum methylation... 68 1e-009
gb|BG239935.1|BG239935 OV1_30_H09.g1_A002 Ovary 1 (OV1) Sor... 68 1e-009
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 68 1e-009
gb|CL175362.1|CL175362 104_380_10892393_116_31767_377 Sorgh... 66 6e-009
gb|CW177868.1|CW177868 104_591_11159260_148_36613_010 Sorgh... 66 6e-009
gb|CW198655.1|CW198655 104_623_11183089_148_36841_007 Sorgh... 66 6e-009
gb|CW204527.1|CW204527 104_632_11186589_148_36922_087 Sorgh... 66 6e-009
gb|CW226217.1|CW226217 104_664_11204768_148_37221_030 Sorgh... 66 6e-009
gb|CW310091.1|CW310091 104_799_11469537_116_35745_045 Sorgh... 66 6e-009
gb|CW415527.1|CW415527 fsbb001f115k18k0 Sorghum methylation... 66 6e-009
gb|CW416582.1|CW416582 fsbb001f117d07f0 Sorghum methylation... 66 6e-009
gb|CW421797.1|CW421797 fsbb001f130m08k0 Sorghum methylation... 66 6e-009
gb|CW493277.1|CW493277 fsbb001f283p16f0 Sorghum methylation... 66 6e-009
gb|BG411605.1|BG411605 EM1_58_H08.b1_A002 Embryo 1 (EM1) So... 66 6e-009
gb|BM328097.1|BM328097 PIC1_21_B02.g1_A002 Pathogen-infecte... 66 6e-009
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 64 2e-008
gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorgh... 64 2e-008
gb|CW161070.1|CW161070 104_567_11150217_148_36416_033 Sorgh... 64 2e-008
gb|CW247719.1|CW247719 104_708_11221917_116_36081_083 Sorgh... 62 9e-008
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 62 9e-008
gb|CW273304.1|CW273304 104_745_11403819_116_35356_004 Sorgh... 60 4e-007
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 60 4e-007
gb|CN138660.1|CN138660 OX1_13_D12.b1_A002 Oxidatively-stres... 60 4e-007
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 60 4e-007
gb|CN145297.1|CN145297 WOUND1_28_C01.b2_A002 Wounded leaves... 60 4e-007
gb|CL150041.1|CL150041 104_331_10778242_116_31356_178 Sorgh... 58 1e-006
gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorgh... 58 1e-006
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 58 1e-006
gb|CW141973.1|CW141973 104_533_11136596_116_34937_078 Sorgh... 58 1e-006
gb|CW234700.1|CW234700 104_688_11214165_148_37386_085 Sorgh... 58 1e-006
gb|CW256509.1|CW256509 104_721_11226831_148_35142_054 Sorgh... 58 1e-006
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 58 1e-006
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 58 1e-006
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 58 1e-006
gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1)... 58 1e-006
gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1... 58 1e-006
gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1)... 58 1e-006
gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) So... 58 1e-006
gb|CD222138.1|CD222138 CCC1_2_E09.b1_A007 Callus culture/ce... 58 1e-006
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 58 1e-006
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 58 1e-006
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 58 1e-006
gb|CN135542.1|CN135542 OX1_37_B02.g1_A002 Oxidatively-stres... 58 1e-006
gb|CN149495.1|CN149495 WOUND1_63_D02.b1_A002 Wounded leaves... 58 1e-006
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 58 1e-006
gb|CL179734.1|CL179734 104_389_10895515_148_31907_043 Sorgh... 56 6e-006
gb|CW144970.1|CW144970 104_537_11138222_116_34973_057 Sorgh... 56 6e-006
gb|CW144971.1|CW144971 104_537_11138222_148_34969_057 Sorgh... 56 6e-006
gb|CW298153.1|CW298153 104_780_11462428_148_35653_006 Sorgh... 56 6e-006
gb|CW301870.1|CW301870 104_785_11464426_116_36263_033 Sorgh... 56 6e-006
gb|CW301983.1|CW301983 104_786_11464484_148_35667_080 Sorgh... 56 6e-006
gb|CW426646.1|CW426646 fsbb001f138c14f0 Sorghum methylation... 56 6e-006
gb|AW678260.1|AW678260 WS1_14_C01.b1_A002 Water-stressed 1 ... 56 6e-006
gb|AW678342.1|AW678342 WS1_14_C01.g1_A002 Water-stressed 1 ... 56 6e-006
gb|AW679039.1|AW679039 WS1_22_H01.b1_A002 Water-stressed 1 ... 56 6e-006
gb|AW679107.1|AW679107 WS1_22_H01.g1_A002 Water-stressed 1 ... 56 6e-006
gb|BE125309.1|BE125309 DG1_19_A01.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|BE355901.1|BE355901 DG1_11_E04.g1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|BF421110.1|BF421110 FM1_6_E04.g1_A003 Floral-Induced Mer... 56 6e-006
gb|BF421487.1|BF421487 FM1_8_D04.g1_A003 Floral-Induced Mer... 56 6e-006
gb|CW067692.1|CW067692 104_315_10524451_114_30124 Sorghum m... 54 2e-005
gb|CW311029.1|CW311029 104_800_11470021_116_35753_057 Sorgh... 54 2e-005
gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation... 54 2e-005
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 54 2e-005
gb|BE356065.1|BE356065 DG1_122_C07.b1_A002 Dark Grown 1 (DG... 54 2e-005
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 54 2e-005
gb|BF705288.1|BF705288 RHIZ2_3_B07.g1_A003 Rhizome2 (RHIZ2)... 54 2e-005
gb|BG649436.1|BG649436 EM1_79_D06.b1_A002 Embryo 1 (EM1) So... 54 2e-005
gb|BE362928.2|BE362928 DG1_91_A07.b1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 54 2e-005
gb|CN139739.1|CN139739 OX1_23_G10.g1_A002 Oxidatively-stres... 54 2e-005
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 52 9e-005
gb|CW209074.1|CW209074 104_638_11189032_116_36984_050 Sorgh... 52 9e-005
gb|CW311030.1|CW311030 104_800_11470021_148_35757_057 Sorgh... 52 9e-005
gb|CW365897.1|CW365897 fsbb001f038k07k0 Sorghum methylation... 52 9e-005
gb|AW746008.1|AW746008 WS1_38_H05.g1_A002 Water-stressed 1 ... 52 9e-005
gb|BE360463.1|BE360463 DG1_63_F11.g1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BE593909.1|BE593909 WS1_103_H02.g1_A002 Water-stressed 1... 52 9e-005
gb|BF705022.1|BF705022 RHIZ2_1_D07.g1_A003 Rhizome2 (RHIZ2)... 52 9e-005
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 52 9e-005
gb|CD431626.1|CD431626 ETH1_10_F11.b1_A002 Ethylene-treated... 52 9e-005
gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated... 52 9e-005
gb|CW214456.1|CW214456 104_646_11194027_116_37050_074 Sorgh... 50 4e-004
gb|CW214457.1|CW214457 104_646_11194027_148_37054_074 Sorgh... 50 4e-004
gb|CW220175.1|CW220175 104_654_11197212_148_37147_036 Sorgh... 50 4e-004
gb|CW401979.1|CW401979 fsbb001f093b04f0 Sorghum methylation... 50 4e-004
gb|CW425036.1|CW425036 fsbb001f135k20f0 Sorghum methylation... 50 4e-004
gb|CW447899.1|CW447899 fsbb001f181d19f0 Sorghum methylation... 50 4e-004
gb|CF772662.1|CF772662 DSBF1_37_H01.g1_A010 Drought-stresse... 50 4e-004
gb|CN129060.1|CN129060 RHOH1_33_F09.b3_A002 Acid- and alkal... 50 4e-004
gb|CX621928.1|CX621928 GABR1_61_B06.b2_A002 GA- or brassino... 50 4e-004
gb|CL175363.1|CL175363 104_380_10892393_148_31766_377 Sorgh... 48 0.001
gb|CW155746.1|CW155746 104_558_11146303_148_36368_026 Sorgh... 48 0.001
gb|CW230586.1|CW230586 104_679_11210644_116_37485_008 Sorgh... 48 0.001
gb|CW338488.1|CW338488 104_838_11484773_116_36122_017 Sorgh... 48 0.001
gb|CW457969.1|CW457969 fsbb001f204a10f0 Sorghum methylation... 48 0.001
gb|BE360644.1|BE360644 DG1_64_A05.g1_A002 Dark Grown 1 (DG1... 48 0.001
gb|CD463384.1|CD463384 ETH1_44_A03.b1_A002 Ethylene-treated... 48 0.001
gb|CN137074.1|CN137074 OX1_55_B10.b1_A002 Oxidatively-stres... 48 0.001
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 46 0.005
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 46 0.005
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 46 0.005
gb|CW097287.1|CW097287 104_463_11002374_116_34345_025 Sorgh... 46 0.005
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 46 0.005
gb|CW196606.1|CW196606 104_620_11181252_148_36815_038 Sorgh... 46 0.005
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 46 0.005
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 46 0.005
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 46 0.005
gb|CW218305.1|CW218305 104_651_11196114_148_37458_065 Sorgh... 46 0.005
gb|CW238006.1|CW238006 104_694_11216489_116_37395_069 Sorgh... 46 0.005
gb|CW285485.1|CW285485 104_762_11410358_116_35504_051 Sorgh... 46 0.005
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 46 0.005
gb|CW342336.1|CW342336 104_844_11486818_116_36180_045 Sorgh... 46 0.005
gb|CW342337.1|CW342337 104_844_11486818_148_36179_045 Sorgh... 46 0.005
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 46 0.005
gb|CW434447.1|CW434447 fsbb001f150c10f0 Sorghum methylation... 46 0.005
gb|CW434881.1|CW434881 fsbb001f150m16f0 Sorghum methylation... 46 0.005
gb|CW486287.1|CW486287 fsbb001f249h09f0 Sorghum methylation... 46 0.005
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 46 0.005
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BI643620.1|BI643620 DG1_91_G03.b1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BM329425.1|BM329425 PIC1_37_G06.g1_A002 Pathogen-infecte... 46 0.005
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 46 0.005
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 46 0.005
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 46 0.005
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 46 0.005
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 46 0.005
gb|CW371293.1|CW371293 fsbb001f046k24k0 Sorghum methylation... 44 0.022
gb|AW672361.1|AW672361 LG1_359_D08.b1_A002 Light Grown 1 (L... 44 0.022
gb|BG557570.1|BG557570 EM1_53_B10.g1_A002 Embryo 1 (EM1) So... 44 0.022
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 44 0.022
gb|CL160470.1|CL160470 104_351_10805013_114_31824_069 Sorgh... 42 0.086
gb|CL160471.1|CL160471 104_351_10805013_116_31825_069 Sorgh... 42 0.086
gb|CW036840.1|CW036840 104_268_10504001_114_30381 Sorghum m... 42 0.086
gb|CW038940.1|CW038940 104_271_10505207_114_30387 Sorghum m... 42 0.086
gb|CW038941.1|CW038941 104_271_10505207_115_30388 Sorghum m... 42 0.086
gb|CW040272.1|CW040272 104_273_10506026_114_30266 Sorghum m... 42 0.086
gb|CW087654.1|CW087654 104_432_10947755_116_32554_042 Sorgh... 42 0.086
gb|CW096875.1|CW096875 104_462_11002137_116_34348_035 Sorgh... 42 0.086
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 42 0.086
gb|CW176384.1|CW176384 104_589_11158459_116_36586_076 Sorgh... 42 0.086
gb|CW184129.1|CW184129 104_600_11164988_116_36688_076 Sorgh... 42 0.086
gb|CW207130.1|CW207130 104_636_11187954_148_36968_077 Sorgh... 42 0.086
gb|CW218492.1|CW218492 104_652_11196219_116_37460_014 Sorgh... 42 0.086
gb|CW225800.1|CW225800 104_663_11204551_116_37207_022 Sorgh... 42 0.086
gb|CW225801.1|CW225801 104_663_11204551_148_37208_022 Sorgh... 42 0.086
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 42 0.086
gb|CW273305.1|CW273305 104_745_11403819_148_35360_004 Sorgh... 42 0.086
gb|CW279626.1|CW279626 104_754_11407179_116_35435_008 Sorgh... 42 0.086
gb|CW279627.1|CW279627 104_754_11407179_148_35439_008 Sorgh... 42 0.086
gb|CW304181.1|CW304181 104_789_11465646_116_35704_031 Sorgh... 42 0.086
gb|CW412821.1|CW412821 fsbb001f108k15f0 Sorghum methylation... 42 0.086
gb|CW412822.1|CW412822 fsbb001f108k15k0 Sorghum methylation... 42 0.086
gb|CW446759.1|CW446759 fsbb001f179j05f0 Sorghum methylation... 42 0.086
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 42 0.086
gb|CD232788.1|CD232788 SS1_1_C02.g1_A012 Salt-stressed seed... 42 0.086
gb|CD233723.1|CD233723 SS1_3_D04.g1_A012 Salt-stressed seed... 42 0.086
gb|CD429152.1|CD429152 ETH1_2_D06.g1_A002 Ethylene-treated ... 42 0.086
gb|CN138525.1|CN138525 OX1_64_G04.b1_A002 Oxidatively-stres... 42 0.086
gb|CN142273.1|CN142273 WOUND1_9_A01.b1_A002 Wounded leaves ... 42 0.086
gb|CX610269.1|CX610269 ANR1_17_D05.g1_A002 Anaerobic roots ... 42 0.086
gb|CX615147.1|CX615147 GABR1_18_A03.g1_A002 GA- or brassino... 42 0.086
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 42 0.086
gb|CX622414.1|CX622414 GABR1_63_G05.g2_A002 GA- or brassino... 42 0.086
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 40 0.34
gb|BZ341816.1|BZ341816 ic78h07.b1 WGS-SbicolorF (JM107 adap... 40 0.34
gb|BZ692673.1|BZ692673 SP__Ba0024O09.f SP__Ba Sorghum propi... 40 0.34
gb|CW027499.1|CW027499 104_254_10498553_114_30395 Sorghum m... 40 0.34
gb|CW027500.1|CW027500 104_254_10498553_116_30396 Sorghum m... 40 0.34
gb|CW033355.1|CW033355 104_262_10501908_115_30362 Sorghum m... 40 0.34
gb|CW044257.1|CW044257 104_280_10508847_115_30242 Sorghum m... 40 0.34
gb|CW116129.1|CW116129 104_491_11106945_116_34600_037 Sorgh... 40 0.34
gb|CW243706.1|CW243706 104_704_11220196_116_37580_010 Sorgh... 40 0.34
gb|CW260490.1|CW260490 104_727_11228993_116_35195_075 Sorgh... 40 0.34
gb|CW260491.1|CW260491 104_727_11228993_148_35199_075 Sorgh... 40 0.34
gb|CW303507.1|CW303507 104_788_11465276_148_35698_080 Sorgh... 40 0.34
gb|CW336561.1|CW336561 104_835_11483659_116_36096_066 Sorgh... 40 0.34
gb|CW336562.1|CW336562 104_835_11483659_148_36100_066 Sorgh... 40 0.34
gb|CW375457.1|CW375457 fsbb001f052n10f0 Sorghum methylation... 40 0.34
gb|CW395271.1|CW395271 fsbb001f083d19f0 Sorghum methylation... 40 0.34
gb|CW419581.1|CW419581 fsbb001f124i02k0 Sorghum methylation... 40 0.34
gb|CW460686.1|CW460686 fsbb001f207p21f0 Sorghum methylation... 40 0.34
gb|CW502519.1|CW502519 fsbb001f298o10f0 Sorghum methylation... 40 0.34
gb|CW786520.1|CW786520 SP__Ba0024O09.f SP__Ba Sorghum propi... 40 0.34
gb|AW923985.1|AW923985 WS1_32_F10.b1_A002 Water-stressed 1 ... 40 0.34
gb|BE592617.1|BE592617 WS1_95_H02.b1_A002 Water-stressed 1 ... 40 0.34
gb|BF421496.1|BF421496 FM1_8_E04.g1_A003 Floral-Induced Mer... 40 0.34
gb|BG412464.1|BG412464 OV2_34_E08.g1_A002 Ovary 2 (OV2) Sor... 40 0.34
gb|CD463056.1|CD463056 ETH1_42_F03.b1_A002 Ethylene-treated... 40 0.34
gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 40 0.34
>gb|BE359585.1|BE359585 DG1_54_E06.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 425
Score = 381 bits (192), Expect = e-104
Identities = 315/356 (88%)
Strand = Plus / Plus
Query: 353 cgacgacaagttctacagcgcgtggatacccgtgttcaggggcaggacggcggaggagat 412
|||||||||||| | |||||||||| |||| || |||| |||| |||||| |||||||
Sbjct: 1 cgacgacaagttgttcagcgcgtggctaccggtcttcattggcaagacggccgaggagag 60
Query: 413 ggcggaggcggcgaggcaggccgtcgcggcgctggagacgctggagcaggcgttcaggga 472
|| ||||||||||| ||||| | |||| ||||||| ||||||||||| |||||| ||
Sbjct: 61 ggtggaggcggcgacgcaggtcctcgccacgctggacacgctggagcaagcgttcgaaga 120
Query: 473 gtgctccaaggggaaggccttcttcggaggggacagcgtggggctcgtcgacgtcgtgct 532
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 121 gtgctccaaggggaaggccttcttcgcaggggacaccgtggggctcgtcgacgtcgtgct 180
Query: 533 cggcggccttgttgggtggctgtacgccaccgaggccatctgcggggtgaaggccctcga 592
||| || || | |||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 181 tggcagctttctcgggtggctgtacgccaccgaggccatctgcggggtgaaggtcgtcga 240
Query: 593 cgccggcaggacgccgctgctggcggcgtgggcggagcggttctgcgcgctggagggtgt 652
|||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 241 cgccaccaggacgccgctgctggcggcgtgggcggagcggttctgcgcgctggatgcagc 300
Query: 653 caaggggctgatcccggacgtggacaggcttctggagtataccaaggccaggcggg 708
||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||
Sbjct: 301 gaaggggctgatcccggatgtggagaggcttgtggagtataacaaggccaggcggg 356
>gb|BE352946.1|BE352946 DG1_1_F08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 398
Score = 331 bits (167), Expect = 6e-089
Identities = 242/267 (90%)
Strand = Plus / Plus
Query: 442 cgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcggag 501
||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||
Sbjct: 11 cgctggacacgctggagcaagcgttcgaagagtgctccaaggggaaggccttcttcgcag 70
Query: 502 gggacagcgtggggctcgtcgacgtcgtgctcggcggccttgttgggtggctgtacgcca 561
|||||| |||||||||||||||||||||||| ||| || || | ||||||||||||||||
Sbjct: 71 gggacaccgtggggctcgtcgacgtcgtgcttggcagctttctcgggtggctgtacgcca 130
Query: 562 ccgaggccatctgcggggtgaaggccctcgacgccggcaggacgccgctgctggcggcgt 621
|||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||
Sbjct: 131 ccgaggccatctgcggggtgaaggtcgtcgacgccaccaggacgccgctgctggcggcgt 190
Query: 622 gggcggagcggttctgcgcgctggagggtgtcaaggggctgatcccggacgtggacaggc 681
||||||||||||||||||||||||| | | ||||||||||||||||| ||||| ||||
Sbjct: 191 gggcggagcggttctgcgcgctggatgcagcgaaggggctgatcccggatgtggagaggc 250
Query: 682 ttctggagtataccaaggccaggcggg 708
|| ||||||||| ||||||||||||||
Sbjct: 251 ttgtggagtataacaaggccaggcggg 277
>gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 411
Score = 287 bits (145), Expect = 9e-076
Identities = 290/337 (86%), Gaps = 6/337 (1%)
Strand = Plus / Plus
Query: 52 aagagcttacgctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgc 111
|||||||||| |||||||| || |||||||||||||||||| || ||| ||||||||||
Sbjct: 56 aagagcttacactgctgggtttgtgggcgagcccgttcgtgatcagggtgcgcatcgcgt 115
Query: 112 tcagcctcaaaggcctcac---ctacgcatactccgaggagaacctcgacgacaagagcg 168
||| ||| ||||||||||| ||||| ||| |||||||| | || || |||||||||
Sbjct: 116 tcaacctgaaaggcctcacggcctacgtttacagcgaggagagcatctaccacaagagcg 175
Query: 169 agcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggca 228
|||||||||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||
Sbjct: 176 agcttctcctcaagtccaaccctgtgctcaagaaggtgccggtgctcctccacgacggca 235
Query: 229 agcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggctttcc---ccgccg 285
|| || |||||||||| ||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 236 agaccatctgcgagtctcagatcatcctccagtacgtcgacgaggctttccccaccgccg 295
Query: 286 ccgcacctaatttccttccatccgacccctacgaccgcgccattgctcgcttctgggcct 345
||| | ||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 ccggcgcgcccgtccttccctccgacccatacgaccgcgccattgctcgcttctgggcct 355
Query: 346 cctacgtcgacgacaagttctacagcgcgtggatacc 382
||||||||||||||||||| | |||||||||| ||||
Sbjct: 356 cctacgtcgacgacaagttgttcagcgcgtggctacc 392
>gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 412
Score = 287 bits (145), Expect = 9e-076
Identities = 290/337 (86%), Gaps = 6/337 (1%)
Strand = Plus / Plus
Query: 52 aagagcttacgctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgc 111
|||||||||| |||||||| || |||||||||||||||||| || ||| ||||||||||
Sbjct: 56 aagagcttacactgctgggtttgtgggcgagcccgttcgtgatcagggtgcgcatcgcgt 115
Query: 112 tcagcctcaaaggcctcac---ctacgcatactccgaggagaacctcgacgacaagagcg 168
||| ||| ||||||||||| ||||| ||| |||||||| | || || |||||||||
Sbjct: 116 tcaacctgaaaggcctcacggcctacgtttacagcgaggagagcatctaccacaagagcg 175
Query: 169 agcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggca 228
|||||||||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||
Sbjct: 176 agcttctcctcaagtccaaccctgtgctcaagaaggtgccggtgctcctccacgacggca 235
Query: 229 agcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggctttcc---ccgccg 285
|| || |||||||||| ||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 236 agaccatctgcgagtctcagatcatcctccagtacgtcgacgaggctttccccaccgccg 295
Query: 286 ccgcacctaatttccttccatccgacccctacgaccgcgccattgctcgcttctgggcct 345
||| | ||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 296 ccggcgcgcccgtccttccctccgacccatacgaccgcgccattgctcgcttctgggcct 355
Query: 346 cctacgtcgacgacaagttctacagcgcgtggatacc 382
||||||||||||||||||| | |||||||||| ||||
Sbjct: 356 cctacgtcgacgacaagttgttcagcgcgtggctacc 392
>gb|BE125671.1|BE125671 DG1_54_E06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 301
Score = 206 bits (104), Expect = 3e-051
Identities = 207/241 (85%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 52 aagagcttacgctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgc 111
|||||||||| |||||||| || |||||||||||||||||| || ||| ||||||||||
Sbjct: 56 aagagcttacactgctgggtttgtgggcgagcccgttcgtgatcagggtgcgcatcgcgt 115
Query: 112 tcagcctcaaaggcctcac---ctacgcatactccgaggagaacctcgacgacaagagcg 168
||| ||| ||||||||||| ||||| ||| |||||||| | || || |||||||||
Sbjct: 116 tcaacctgaaaggcctcacggcctacgtttacagcgaggagagcatctaccacaagagcg 175
Query: 169 agcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggca 228
|||||||||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||
Sbjct: 176 agcttctcctcaagtccaaccctgtgctcaagaaggtgccggtgctcctccacgacggca 235
Query: 229 agcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggctttccccgccgccg 288
|| || |||||||||| |||||||| | ||||||||| |||||||||||||| ||||||
Sbjct: 236 agaccatctgcgagtctcagatcatgctccagtacgtcnacgaggctttccccaccgccg 295
Query: 289 c 289
|
Sbjct: 296 c 296
>gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_D08_A002 5', mRNA sequence
Length = 721
Score = 147 bits (74), Expect = 2e-033
Identities = 170/202 (84%)
Strand = Plus / Plus
Query: 79 cgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcctcacctacgcat 138
||||||||||||| || |||| ||| ||||||||| |||||| |||||| ||||| ||
Sbjct: 97 cgagcccgttcgttatcagggcccgcgtcgcgctcaacctcaagggcctcgcctaccgat 156
Query: 139 actccgaggagaacctcgacgacaagagcgagcttctcctcagctccaaccccgtgctca 198
|| |||||| ||||| || |||||||||||| |||||| |||||||||||||| ||
Sbjct: 157 acgtcgaggacgacctcaactgcaagagcgagctcctcctcgcctccaaccccgtgcaca 216
Query: 199 agaaggtgcccgtgctcatccaccacggcaagcccgtctgcgagtcccagatcatcgtgc 258
|||||||| |||||| ||||| |||||| ||||||||||||||||| | ||||||||
Sbjct: 217 ccaaggtgcctgtgctcctccacgacggcaggcccgtctgcgagtcccgggtcatcgtgg 276
Query: 259 agtacgtcgacgaggctttccc 280
|||| ||||||||||| |||||
Sbjct: 277 agtatgtcgacgaggccttccc 298
Score = 141 bits (71), Expect = 1e-031
Identities = 302/379 (79%)
Strand = Plus / Plus
Query: 320 ccgcgccattgctcgcttctgggcctcctacgtcgacgacaagttctacagcgcgtggat 379
||||||| | ||||||||||||||||||||||| || |||||| ||| || | | |||||
Sbjct: 341 ccgcgccgtcgctcgcttctgggcctcctacgtagatgacaagctcttcaccacctggat 400
Query: 380 acccgtgttcaggggcaggacggcggaggagatggcggaggcggcgaggcaggccgtcgc 439
|||||| | || ||||||||| ||||| | || |||||||||||||||| || ||
Sbjct: 401 acccgtttacaacggcaggacgagcgaggacagggtcgaggcggcgaggcaggtggtggc 460
Query: 440 ggcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgg 499
| ||||||| | | |||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 461 cgtcctggagaagtttgagcaggcgttcgaggagtgctccgggggcaaggcgttcttcgg 520
Query: 500 aggggacagcgtggggctcgtcgacgtcgtgctcggcggccttgttgggtggctgtacgc 559
|||||| || || ||||| ||||||||||| |||||| | | ||||||||| |||
Sbjct: 521 cggggacgccgccggcctcgtggacgtcgtgctaggcggcttcctcgggtggctgcgcgc 580
Query: 560 caccgaggccatctgcggggtgaaggccctcgacgccggcaggacgccgctgctggcggc 619
|||||| || ||||| |||| || ||||| ||| || ||||||||||||||||||
Sbjct: 581 gtccgaggtgatgtgcggcgtgagggttatcgaccccgccaagacgccgctgctggcggc 640
Query: 620 gtgggcggagcggttctgcgcgctggagggtgtcaaggggctgatcccggacgtggacag 679
||||||||| |||||| |||||| || || |||| || | |||| || |||||| | ||
Sbjct: 641 gtgggcggaccggttcgccgcgctcgacggcgtcagggaggtgatacctgacgtgcagag 700
Query: 680 gcttctggagtataccaag 698
||| |||||||||| ||||
Sbjct: 701 gctgctggagtataacaag 719
>gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_20_B02_A002 5', mRNA sequence
Length = 687
Score = 147 bits (74), Expect = 2e-033
Identities = 170/202 (84%)
Strand = Plus / Plus
Query: 79 cgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcctcacctacgcat 138
||||||||||||| || |||| ||| ||||||||| |||||| |||||| ||||| ||
Sbjct: 61 cgagcccgttcgttatcagggcccgcgtcgcgctcaacctcaagggcctcgcctaccgat 120
Query: 139 actccgaggagaacctcgacgacaagagcgagcttctcctcagctccaaccccgtgctca 198
|| |||||| ||||| || |||||||||||| |||||| |||||||||||||| ||
Sbjct: 121 acgtcgaggacgacctcaactgcaagagcgagctcctcctcgcctccaaccccgtgcaca 180
Query: 199 agaaggtgcccgtgctcatccaccacggcaagcccgtctgcgagtcccagatcatcgtgc 258
|||||||| |||||| ||||| |||||| ||||||||||||||||| | ||||||||
Sbjct: 181 ccaaggtgcctgtgctcctccacgacggcaggcccgtctgcgagtcccgggtcatcgtgg 240
Query: 259 agtacgtcgacgaggctttccc 280
|||| ||||||||||| |||||
Sbjct: 241 agtatgtcgacgaggccttccc 262
Score = 121 bits (61), Expect = 1e-025
Identities = 303/381 (79%), Gaps = 2/381 (0%)
Strand = Plus / Plus
Query: 320 ccgcgccattgctcgcttctgggcctcctacgtcgacgacaagttctacagcgcgtggat 379
||||||| | ||||||||||||||||||||||| || |||||| ||| || | | |||||
Sbjct: 305 ccgcgccgtcgctcgcttctgggcctcctacgtagatgacaagctcttcaccacctggat 364
Query: 380 acccgtgttcaggggcaggacggcggaggagatggcggaggcggcgaggcaggccgtcgc 439
|||||| | || ||||||||| ||||| | || |||||||||||||||| || ||
Sbjct: 365 acccgtttacaacggcaggacgagcgaggacagggtcgaggcggcgaggcaggtggtggc 424
Query: 440 ggcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttc-g 498
| ||||||| | | |||||||||||| |||||||||| ||| ||||| |||||| |
Sbjct: 425 cgtcctggagaagtttgagcaggcgttcgaggagtgctccgggggcaaggcgttcttcgg 484
Query: 499 gaggggacagcgtggggctcgtcgacgtcgtgctcggcggccttgttgggtggctgtacg 558
| |||||| || || ||||| ||||||||||| |||||| | | ||||||||| ||
Sbjct: 485 gcggggacgccgccggcctcgtggacgtcgtgctaggcggcttcctcgggtggctgcgcg 544
Query: 559 ccaccgaggccatctgcggg-gtgaaggccctcgacgccggcaggacgccgctgctggcg 617
| |||||| || |||||| |||| || ||||| ||| || ||||||||||||||||
Sbjct: 545 cgtccgaggtgatgtgcgggcgtgagggttatcgaccccgccaagacgccgctgctggcg 604
Query: 618 gcgtgggcggagcggttctgcgcgctggagggtgtcaaggggctgatcccggacgtggac 677
||||||||||| |||||| |||||| || || |||| || | |||| || |||||| |
Sbjct: 605 gcgtgggcggaccggttcgccgcgctcgacggcgtcagggaggtgatacctgacgtgcag 664
Query: 678 aggcttctggagtataccaag 698
||||| |||||||||| ||||
Sbjct: 665 aggctgctggagtataacaag 685
>gb|CN135950.1|CN135950 OX1_39_H10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_H10_A002 5', mRNA sequence
Length = 459
Score = 147 bits (74), Expect = 2e-033
Identities = 170/202 (84%)
Strand = Plus / Plus
Query: 79 cgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcctcacctacgcat 138
||||||||||||| || |||| ||| ||||||||| |||||| |||||| ||||| ||
Sbjct: 55 cgagcccgttcgttatcagggcccgcgtcgcgctcaacctcaagggcctcgcctaccgat 114
Query: 139 actccgaggagaacctcgacgacaagagcgagcttctcctcagctccaaccccgtgctca 198
|| |||||| ||||| || |||||||||||| |||||| |||||||||||||| ||
Sbjct: 115 acgtcgaggacgacctcaactgcaagagcgagctcctcctcgcctccaaccccgtgcaca 174
Query: 199 agaaggtgcccgtgctcatccaccacggcaagcccgtctgcgagtcccagatcatcgtgc 258
|||||||| |||||| ||||| |||||| ||||||||||||||||| | ||||||||
Sbjct: 175 ccaaggtgcctgtgctcctccacgacggcaggcccgtctgcgagtcccgggtcatcgtgg 234
Query: 259 agtacgtcgacgaggctttccc 280
|||| ||||||||||| |||||
Sbjct: 235 agtatgtcgacgaggccttccc 256
Score = 65.9 bits (33), Expect = 6e-009
Identities = 129/161 (80%)
Strand = Plus / Plus
Query: 320 ccgcgccattgctcgcttctgggcctcctacgtcgacgacaagttctacagcgcgtggat 379
||||||| | ||||||||||||||||||||||| || |||||| ||| || | | |||||
Sbjct: 299 ccgcgccgtcgctcgcttctgggcctcctacgtagatgacaagctcttcaccacctggat 358
Query: 380 acccgtgttcaggggcaggacggcggaggagatggcggaggcggcgaggcaggccgtcgc 439
|||||| | || ||||||||| ||||| | || |||||||||||||||| || ||
Sbjct: 359 acccgtttacaacggcaggacgagcgaggacagggtcgaggcggcgaggcaggtggtggc 418
Query: 440 ggcgctggagacgctggagcaggcgttcagggagtgctcca 480
| ||||||| | | |||||||||||| ||| |||||||
Sbjct: 419 cgtcctggagaagtttgagcaggcgttcgaggaatgctcca 459
>gb|AW922444.1|AW922444 DG1_19_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 208
Score = 137 bits (69), Expect = 2e-030
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 344 ctcctacgtcgacgacaagttctacagcgcgtggatacccgtgttcaggggcaggacggc 403
||||||||||||||||||||| | |||||||||| ||| || |||| |||| ||||||
Sbjct: 1 ctcctacgtcgacgacaagttgttcagcgcgtggcaaccggtcttcattggcaagacggc 60
Query: 404 ggaggagatggcggaggcggcgaggcaggccgtcgcggcgctggagacgctggagcaggc 463
|| ||| || | ||||||||| ||||| | || | ||||||| ||||||||||| ||
Sbjct: 61 ccagtagagggtgtaggcggcgacgcaggtcctccccacgctggacacgctggagcaagc 120
Query: 464 gttcagggagtgctccaaggggaaggccttcttcggaggggacagcgtggggctcgtcga 523
|||| |||||||||||||||||||||||||||| |||| || |||||||||||||||
Sbjct: 121 gttcgaagagtgctccaaggggaaggccttcttcgcagggcactccgtggggctcgtcga 180
Query: 524 cgtcgtgct 532
|||||||||
Sbjct: 181 cgtcgtgct 189
>gb|CW032162.1|CW032162 104_261_10501223_114_30363 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10501223, DNA
sequence
Length = 540
Score = 135 bits (68), Expect = 8e-030
Identities = 161/192 (83%)
Strand = Plus / Plus
Query: 79 cgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcctcacctacgcat 138
||||||||||||| || |||| ||| ||||||||| |||||| |||||| ||||| ||
Sbjct: 349 cgagcccgttcgttatcagggcccgcgtcgcgctcaacctcaagggcctcgcctaccgat 408
Query: 139 actccgaggagaacctcgacgacaagagcgagcttctcctcagctccaaccccgtgctca 198
|| |||||| ||||| || |||||||||||| |||||| |||||||||||||| ||
Sbjct: 409 acgtcgaggacgacctcaactgcaagagcgagctcctcctcgcctccaaccccgtgcaca 468
Query: 199 agaaggtgcccgtgctcatccaccacggcaagcccgtctgcgagtcccagatcatcgtgc 258
|||||||| |||||| ||||| |||||| ||||||||||||||||| | ||||||||
Sbjct: 469 ccaaggtgcctgtgctcctccacgacggcaggcccgtctgcgagtcccgggtcatcgtgg 528
Query: 259 agtacgtcgacg 270
|||| |||||||
Sbjct: 529 agtatgtcgacg 540
>gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_D08_A002 3', mRNA sequence
Length = 668
Score = 133 bits (67), Expect = 3e-029
Identities = 301/379 (79%)
Strand = Plus / Plus
Query: 320 ccgcgccattgctcgcttctgggcctcctacgtcgacgacaagttctacagcgcgtggat 379
||||||| | |||||||| |||||||||||||| || |||||| ||| || | | |||||
Sbjct: 141 ccgcgccgtcgctcgcttttgggcctcctacgtagatgacaagctcttcaccacctggat 200
Query: 380 acccgtgttcaggggcaggacggcggaggagatggcggaggcggcgaggcaggccgtcgc 439
|||||| | || ||||||||| ||||| | || |||||||||||||||| || ||
Sbjct: 201 acccgtttacaacggcaggacgagcgaggacagggtcgaggcggcgaggcaggtggtggc 260
Query: 440 ggcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgg 499
| ||||||| | | |||||||||||| |||||||||| ||| ||||| ||||||||
Sbjct: 261 cgtcctggagaagtttgagcaggcgttcgaggagtgctccgggggcaaggcgttcttcgg 320
Query: 500 aggggacagcgtggggctcgtcgacgtcgtgctcggcggccttgttgggtggctgtacgc 559
|||||| || || ||||| ||||||||||| |||||| | | ||||||||| |||
Sbjct: 321 cggggacgccgccggcctcgtggacgtcgtgctaggcggcttcctcgggtggctgcgcgc 380
Query: 560 caccgaggccatctgcggggtgaaggccctcgacgccggcaggacgccgctgctggcggc 619
|||||| || ||||| |||| || ||||| ||| || ||||||||||||||||||
Sbjct: 381 gtccgaggtgatgtgcggcgtgagggttatcgaccccgccaagacgccgctgctggcggc 440
Query: 620 gtgggcggagcggttctgcgcgctggagggtgtcaaggggctgatcccggacgtggacag 679
||||||||| |||||| |||||| || || |||| || | |||| || |||||| | ||
Sbjct: 441 gtgggcggaccggttcgccgcgctcgacggcgtcagggaggtgatacctgacgtgcagag 500
Query: 680 gcttctggagtataccaag 698
||| |||||||||| ||||
Sbjct: 501 gctgctggagtataacaag 519
Score = 99.6 bits (50), Expect = 4e-019
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 183 tccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcgag 242
||||||||||||| || |||||||| |||||| ||||| |||||| |||||||||||||
Sbjct: 1 tccaaccccgtgcacaccaaggtgcctgtgctcctccacgacggcaggcccgtctgcgag 60
Query: 243 tcccagatcatcgtgcagtacgtcgacgaggctttccc 280
|||| | |||||||| |||| ||||||||||| |||||
Sbjct: 61 tcccgggtcatcgtggagtatgtcgacgaggccttccc 98
>gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from sorghum infested by greenbug
aphids Sorghum bicolor cDNA clone GST3 similar to
Glutathione S-transferase, mRNA sequence
Length = 420
Score = 127 bits (64), Expect = 2e-027
Identities = 166/200 (83%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | ||||||||||| ||||
Sbjct: 221 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagcttcaa 280
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 281 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 340
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 341 ctcaaacccagtgcacaagaaggtgcccgtcctcatccacaacggcaagccggtctgtga 400
Query: 242 gtcccagatcatcgtgcagt 261
||||||||||||||||||||
Sbjct: 401 gtcccagatcatcgtgcagt 420
>gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222168, DNA
sequence
Length = 668
Score = 125 bits (63), Expect = 7e-027
Identities = 171/207 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| ||||| | |||||||||||| || |||| ||| ||||||||| ||||||
Sbjct: 437 gctgctgggcctatggaccagcccgttcgtgatcagggcacgcctcgcgctcaacctcaa 496
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| || || | |||||||| |||| ||||||
Sbjct: 497 gggcctgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgc 556
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||| ||||| | ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 557 gtccaatcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcga 616
Query: 242 gtcccagatcatcgtgcagtacgtcga 268
|| ||| |||||||||| ||| ||||
Sbjct: 617 atcacaggtcatcgtgcactacatcga 643
>gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11222168, DNA
sequence
Length = 618
Score = 125 bits (63), Expect = 7e-027
Identities = 171/207 (82%)
Strand = Plus / Minus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| ||||| | |||||||||||| || |||| ||| ||||||||| ||||||
Sbjct: 548 gctgctgggcctatggaccagcccgttcgtgatcagggcacgcctcgcgctcaacctcaa 489
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| || || | |||||||| |||| ||||||
Sbjct: 488 gggcctgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgc 429
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||| ||||| | ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 428 gtccaatcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcga 369
Query: 242 gtcccagatcatcgtgcagtacgtcga 268
|| ||| |||||||||| ||| ||||
Sbjct: 368 atcacaggtcatcgtgcactacatcga 342
Score = 56.0 bits (28), Expect = 6e-006
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 436 tcgcggcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttct 495
|||||||||||||||||||||| |||||| ||| |||||||||||||||| || ||
Sbjct: 79 tcgcggcgctggagacgctggaaagcgcgttccaggactgctccaaggggaagggctact 20
Query: 496 tcgg 499
||||
Sbjct: 19 tcgg 16
Score = 40.1 bits (20), Expect = 0.34
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||||| || |||| || |||||||||||| | ||||| || ||||||
Sbjct: 294 ccgacccctacgagcgtgccaccgcccgcttctgggccgcgtacgtggatgacaag 239
>gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 125 bits (63), Expect = 7e-027
Identities = 171/207 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| ||||| | |||||||||||| || |||| ||| ||||||||| ||||||
Sbjct: 141 gctgctgggcctatggaccagcccgttcgtgatcagggcacgcctcgcgctcaacctcaa 200
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| || || | |||||||| |||| ||||||
Sbjct: 201 gggcctgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgc 260
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||| ||||| | ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 261 gtccaatcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcga 320
Query: 242 gtcccagatcatcgtgcagtacgtcga 268
|| ||| |||||||||| ||| ||||
Sbjct: 321 atcacaggtcatcgtgcactacatcga 347
Score = 40.1 bits (20), Expect = 0.34
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||||| || |||| || |||||||||||| | ||||| || ||||||
Sbjct: 395 ccgacccctacgagcgtgccaccgcccgcttctgggccgcgtacgtggatgacaag 450
>gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_D12_A002 5', mRNA sequence
Length = 608
Score = 125 bits (63), Expect = 7e-027
Identities = 171/207 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| ||||| | |||||||||||| || |||| ||| ||||||||| ||||||
Sbjct: 135 gctgctgggcctatggaccagcccgttcgtgatcagggcacgcctcgcgctcaacctcaa 194
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| || || | |||||||| |||| ||||||
Sbjct: 195 gggcctgagctacgagtacgtcgaggaggacgtcaagaacaagagccagctcctcctcgc 254
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||| ||||| | ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 255 gtccaatcccgttcacaagaaggtgcccgtgctcatccacgacgggaagcccgtctgcga 314
Query: 242 gtcccagatcatcgtgcagtacgtcga 268
|| ||| |||||||||| ||| ||||
Sbjct: 315 atcacaggtcatcgtgcactacatcga 341
Score = 52.0 bits (26), Expect = 9e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 436 tcgcggcgctggagacgctggagcaggcgttcagggagtgctccaaggggaagg 489
|||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 518 tcgcggcgctggagacgctggaaagcgcgttccaggactgctccaaggggaagg 571
>gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic81a06 5', DNA sequence
Length = 575
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 117 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 176
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 177 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 236
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 237 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 296
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 297 gtcccagatcatcgtgcagtacctcgacga 326
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 363 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 403
>gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10510471, DNA sequence
Length = 645
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 273 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 332
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 333 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 392
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 393 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 452
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 453 gtcccagatcatcgtgcagtacctcgacga 482
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 519 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 559
>gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10431639, DNA
sequence
Length = 542
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 55 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 114
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 115 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 174
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 175 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 234
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 235 gtcccagatcatcgtgcagtacctcgacga 264
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 301 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 341
>gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503984, DNA
sequence
Length = 610
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 89 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 148
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 149 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 208
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 209 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 268
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 269 gtcccagatcatcgtgcagtacctcgacga 298
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 335 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 375
>gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998534, DNA
sequence
Length = 694
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 159 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 218
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 219 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 278
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 279 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 338
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 339 gtcccagatcatcgtgcagtacctcgacga 368
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 405 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 445
>gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104821, DNA
sequence
Length = 649
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 201 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 260
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 261 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 320
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 321 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 380
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 381 gtcccagatcatcgtgcagtacctcgacga 410
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 447 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 487
>gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112086, DNA
sequence
Length = 530
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 296 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 355
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 356 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 415
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 416 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 475
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 476 gtcccagatcatcgtgcagtacctcgacga 505
>gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085c05, DNA
sequence
Length = 689
Score = 123 bits (62), Expect = 3e-026
Identities = 173/210 (82%)
Strand = Plus / Minus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||||||| ||||| | | |||||||||| ||||
Sbjct: 367 gctgctgggcatgtgggcgagcccgttcgtcctccgtgtgaagctcgcgctcagtttcaa 308
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| || ||||||| ||||| | |||||||||| || || || ||
Sbjct: 307 gggcctgagctacgagtatgtcgaggaggacctccgcaacaagagcgacctcctgcttag 248
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||| ||||| |||| ||||||||||||||| || |||||| |||||||||| ||||| ||
Sbjct: 247 ctcaaacccagtgcacaagaaggtgcccgtccttatccacaacggcaagccggtctgtga 188
Query: 242 gtcccagatcatcgtgcagtacgtcgacga 271
|||||||||||||||||||||| |||||||
Sbjct: 187 gtcccagatcatcgtgcagtacctcgacga 158
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 308 cgacccctacgaccgcgccattgctcgcttctgggcctcct 348
|||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 121 cgacccttacgaacgcgccatggcgcgcttctgggcctcct 81
>gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135238, DNA
sequence
Length = 423
Score = 119 bits (60), Expect = 5e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 81 agcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcctcacctacgcatac 140
|||||||||||| || |||| ||| ||||||||| |||||| ||||| | ||||| |||
Sbjct: 374 agcccgttcgtgatcagggcacgcctcgcgctcaacctcaagggcctgagctacgagtac 315
Query: 141 tccgaggagaacctcgacgacaagagcgagcttctcctcagctccaaccccgtgctcaag 200
||||||| || || | |||||||| |||| |||||| ||||| ||||| | ||||
Sbjct: 314 gtcgaggaggacgtcaagaacaagagccagctcctcctcgcgtccaatcccgttcacaag 255
Query: 201 aaggtgcccgtgctcatccaccacggcaagcccgtctgcgagtcccagatcatcgtgcag 260
||||||||||||||||||||| |||| |||||||||||||| || ||| ||||||||||
Sbjct: 254 aaggtgcccgtgctcatccacgacgggaagcccgtctgcgaatcacaggtcatcgtgcac 195
Query: 261 tacgtcga 268
||| ||||
Sbjct: 194 tacatcga 187
Score = 40.1 bits (20), Expect = 0.34
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||||| || |||| || |||||||||||| | ||||| || ||||||
Sbjct: 139 ccgacccctacgagcgtgccaccgcccgcttctgggccgcgtacgtggatgacaag 84
>gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189032, DNA
sequence
Length = 647
Score = 119 bits (60), Expect = 5e-025
Identities = 105/120 (87%)
Strand = Plus / Plus
Query: 161 caagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcca 220
|||||||||||| |||||| |||||||||||||| || |||||||| |||||| ||||
Sbjct: 21 caagagcgagctcctcctcgcctccaaccccgtgcacaccaaggtgcctgtgctcctcca 80
Query: 221 ccacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggctttccc 280
| |||||| ||||||||||||||||| | |||||||| |||| ||||||||||| |||||
Sbjct: 81 cgacggcaggcccgtctgcgagtcccgggtcatcgtggagtatgtcgacgaggccttccc 140
Score = 97.6 bits (49), Expect = 2e-018
Identities = 217/273 (79%)
Strand = Plus / Plus
Query: 417 gaggcggcgaggcaggccgtcgcggcgctggagacgctggagcaggcgttcagggagtgc 476
|||||||||||||||| || || | ||||||| | | |||||||||||| |||||||
Sbjct: 375 gaggcggcgaggcaggtggtggccgtcctggagaagtttgagcaggcgttcgaggagtgc 434
Query: 477 tccaaggggaaggccttcttcggaggggacagcgtggggctcgtcgacgtcgtgctcggc 536
||| ||| ||||| |||||||| |||||| || || ||||| ||||||||||| |||
Sbjct: 435 tccgggggcaaggcgttcttcggcggggacgccgccggcctcgtggacgtcgtgctaggc 494
Query: 537 ggccttgttgggtggctgtacgccaccgaggccatctgcggggtgaaggccctcgacgcc 596
||| | | ||||||||| ||| |||||| || ||||| |||| || ||||| ||
Sbjct: 495 ggcttcctcgggtggctgcgcgcgtccgaggtgatgtgcggcgtgagggttatcgacccc 554
Query: 597 ggcaggacgccgctgctggcggcgtgggcggagcggttctgcgcgctggagggtgtcaag 656
| || ||||||||||||||||||||||||||| |||||| |||||| || || |||| |
Sbjct: 555 gccaagacgccgctgctggcggcgtgggcggaccggttcgccgcgctcgacggcgtcagg 614
Query: 657 gggctgatcccggacgtggacaggcttctggag 689
| | |||| || |||||| | ||||| ||||||
Sbjct: 615 gaggtgatacctgacgtgcagaggctgctggag 647
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 320 ccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||| | ||||||||||||||||||||||| || ||||||
Sbjct: 183 ccgcgccgtcgctcgcttctgggcctcctacgtagatgacaag 225
>gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150530, DNA
sequence
Length = 707
Score = 117 bits (59), Expect = 2e-024
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
||||||||||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 303 acaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatcc 244
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggc 274
|| |||| ||||||||||||||||| | | ||||| |||| ||| ||||||||||
Sbjct: 243 acaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggc 189
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgaca 360
||||||||||| | |||||| ||||||||||||||||| ||||| |||| ||||
Sbjct: 156 ccgacccctaccaacgcgccgttgctcgcttctgggccgcctacatcgatgaca 103
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 81 agcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcct 127
||||||||||||||||||| || |||| ||||||||||| |||||
Sbjct: 385 agcccgttcgtgctccgggtgcaactcgctctcagcctcaagggcct 339
>gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 117 bits (59), Expect = 2e-024
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
||||||||||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 167 acaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatcc 226
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggc 274
|| |||| ||||||||||||||||| | | ||||| |||| ||| ||||||||||
Sbjct: 227 acaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggc 281
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgaca 360
||||||||||| | |||||| ||||||||||||||||| ||||| |||| ||||
Sbjct: 314 ccgacccctaccaacgcgccgttgctcgcttctgggccgcctacatcgatgaca 367
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 81 agcccgttcgtgctccgggcgcgcatcgcgctcagcctcaaaggcct 127
||||||||||||||||||| || |||| ||||||||||| |||||
Sbjct: 85 agcccgttcgtgctccgggtgcaactcgctctcagcctcaagggcct 131
>gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 117 bits (59), Expect = 2e-024
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
||||||||||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||
Sbjct: 37 acaagagcgagctcctcctcaagtccaaccccgtgcacaaaaaggtacccgtgctcatcc 96
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgaggc 274
|| |||| ||||||||||||||||| | | ||||| |||| ||| ||||||||||
Sbjct: 97 acaacgggaagcccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggc 151
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 307 ccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgaca 360
||||||||||| | |||||| ||||||||||||||||| ||||| |||| ||||
Sbjct: 184 ccgacccctaccaacgcgccgttgctcgcttctgggccgcctacatcgatgaca 237
Score = 42.1 bits (21), Expect = 0.086
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 483 gggaaggccttcttcggaggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|||||| |||||||||| || |||||| ||| ||| ||||||||||||||||||
Sbjct: 360 gggaagcccttcttcggtggcgacagcaccgggtacgtggacgtcgtgctcggcggc 416
>gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119926, DNA
sequence
Length = 607
Score = 115 bits (58), Expect = 7e-024
Identities = 243/304 (79%), Gaps = 3/304 (0%)
Strand = Plus / Minus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
|||||||||| |||||||||||||||||||| |||| | ||||||||||| ||||
Sbjct: 527 gctgctgggggcgtgggcgagcccgttcgtgctgcgggtgaagctcgcgctcagcttcaa 468
Query: 122 aggcctcacctacgcatactccgaggagaacc---tcgacgacaagagcgagcttctcct 178
||||| | ||||| || ||||||| ||| || || |||||||||||| |||||
Sbjct: 467 gggcctgagctacgagaacgtcgaggaggaccacaccgccggcaagagcgagctgctcct 408
Query: 179 cagctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctg 238
|| |||||||| |||| ||||||||||||||||||| ||| | |||| ||||| || ||
Sbjct: 407 caagtccaacccggtgcacaagaaggtgcccgtgctcctccgcaacggtaagcctgtatg 348
Query: 239 cgagtcccagatcatcgtgcagtacgtcgacgaggctttccccgccgccgcacctaattt 298
||| || ||||||||||||||||| | |||||||| ||| ||| | | | || ||
Sbjct: 347 cgaatcgcagatcatcgtgcagtatattgacgaggccttcgccggcactggcccgtcctt 288
Query: 299 ccttccatccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacga 358
||| ||| ||||||| ||| | |||||||| ||||||||||||| |||||||||||||
Sbjct: 287 cctcccaaccgacccttaccagcgcgccatggctcgcttctggggtgcctacgtcgacga 228
Query: 359 caag 362
||||
Sbjct: 227 caag 224
>gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119926, DNA
sequence
Length = 644
Score = 115 bits (58), Expect = 7e-024
Identities = 243/304 (79%), Gaps = 3/304 (0%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
|||||||||| |||||||||||||||||||| |||| | ||||||||||| ||||
Sbjct: 116 gctgctgggggcgtgggcgagcccgttcgtgctgcgggtgaagctcgcgctcagcttcaa 175
Query: 122 aggcctcacctacgcatactccgaggagaacc---tcgacgacaagagcgagcttctcct 178
||||| | ||||| || ||||||| ||| || || |||||||||||| |||||
Sbjct: 176 gggcctgagctacgagaacgtcgaggaggaccacaccgccggcaagagcgagctgctcct 235
Query: 179 cagctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctg 238
|| |||||||| |||| ||||||||||||||||||| ||| | |||| ||||| || ||
Sbjct: 236 caagtccaacccggtgcacaagaaggtgcccgtgctcctccgcaacggtaagcctgtatg 295
Query: 239 cgagtcccagatcatcgtgcagtacgtcgacgaggctttccccgccgccgcacctaattt 298
||| || ||||||||||||||||| | |||||||| ||| ||| | | | || ||
Sbjct: 296 cgaatcgcagatcatcgtgcagtatattgacgaggccttcgccggcactggcccgtcctt 355
Query: 299 ccttccatccgacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacga 358
||| ||| ||||||| ||| | |||||||| ||||||||||||| |||||||||||||
Sbjct: 356 cctcccaaccgacccttaccagcgcgccatggctcgcttctggggtgcctacgtcgacga 415
Query: 359 caag 362
||||
Sbjct: 416 caag 419
>gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150c10, DNA
sequence
Length = 769
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 416 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 475
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 476 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 529
>gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150m16, DNA
sequence
Length = 740
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 416 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 475
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 476 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 529
>gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f275h22, DNA
sequence
Length = 659
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 50 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 109
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 110 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 163
Score = 46.1 bits (23), Expect = 0.005
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 445 tggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcggagggg 504
||||||| || |||| ||| ||| |||||||||||||||||| | ||||| ||||| |
Sbjct: 456 tggagactctcgagcgggcactcaaggagtgctccaaggggaaaccattctttggaggcg 515
Query: 505 acagcgt 511
|||||||
Sbjct: 516 acagcgt 522
>gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 486
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 254 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 313
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 314 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 367
>gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 455
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 217 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 276
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 277 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 330
>gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_D08_A002 5', mRNA sequence
Length = 730
Score = 115 bits (58), Expect = 7e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||| ||||||| ||| |||||||| |||| ||||||||| |||||||||||||
Sbjct: 326 acaagagccagcttcttctccagtccaacccggtgcacaagaaggttcccgtgctcatcc 385
Query: 220 accacggcaagcccgtctgcgagtcccagatcatcgtgcagtacgtcgacgagg 273
|| |||||||||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 386 acaacggcaagcccgtctgcgagaccaagatcatcatgcagtacctagacgagg 439
Score = 46.1 bits (23), Expect = 0.005
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 445 tggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcggagggg 504
||||||| || |||| ||| ||| |||||||||||||||||| | ||||| ||||| |
Sbjct: 602 tggagactctcgagcgggcactcaaggagtgctccaaggggaaaccattctttggaggcg 661
Query: 505 acagcgt 511
|||||||
Sbjct: 662 acagcgt 668
>gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164694, DNA
sequence
Length = 688
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 223 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 282
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 283 acaacggcaagcccatctgcgagtc 307
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
|||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 387 gacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacggcaag 440
>gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 87 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 146
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 147 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 206
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 207 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 266
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 267 gtcgcaggtcatcctgcagtacatcgacgaagctttc 303
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 334 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 387
>gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_33_G05_A012 5', mRNA sequence
Length = 410
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 205 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 264
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 265 acaacggcaagcccatctgcgagtc 289
Score = 52.0 bits (26), Expect = 9e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctac 350
|||||||||| ||||||| | ||||||||||||||| |||||
Sbjct: 369 gacccctacggccgcgccgtcgctcgcttctgggccgcctac 410
>gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_C09_A002 5', mRNA sequence
Length = 765
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 98 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 157
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 158 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 217
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 218 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 277
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 278 gtcgcaggtcatcctgcagtacatcgacgaagctttc 314
Score = 69.9 bits (35), Expect = 4e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 441 gcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgga 500
||||||||||| ||||| |||| | ||||| ||| ||| |||||| ||||||||||
Sbjct: 477 gcgctggagaccttggagggggcgctgagggactgcggcaaagggaagcccttcttcggc 536
Query: 501 ggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 537 ggcgacagcgtcgggttcgtggacgtcgtgctcggcggc 575
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 345 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 398
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggacgccgctgctggcggcgtgggcggagcggttctgcgcgctgga 646
|||| |||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 637 ggactccgcagctggcggcgtggtcggagcgctttggcgcgctgga 682
>gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_G03_A002 5', mRNA sequence
Length = 600
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 100 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 159
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 160 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 219
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 220 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 279
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 280 gtcgcaggtcatcctgcagtacatcgacgaagctttc 316
Score = 69.9 bits (35), Expect = 4e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 441 gcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgga 500
||||||||||| ||||| |||| | ||||| ||| ||| |||||| ||||||||||
Sbjct: 479 gcgctggagaccttggagggggcgctgagggactgcggcaaagggaagcccttcttcggc 538
Query: 501 ggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 539 ggcgacagcgtcgggttcgtggacgtcgtgctcggcggc 577
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 347 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 400
>gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_E09_A002 5', mRNA sequence
Length = 689
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 205 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 264
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 265 acaacggcaagcccatctgcgagtc 289
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
|||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 369 gacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacggcaag 422
>gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_F09_A002 5', mRNA sequence
Length = 753
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 199 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 258
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 259 acaacggcaagcccatctgcgagtc 283
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
|||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 363 gacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacggcaag 416
Score = 50.1 bits (25), Expect = 4e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 606 ccgctgctggcggcgtgggcggagcggtt 634
|||||||||||||||||||| ||||||||
Sbjct: 690 ccgctgctggcggcgtgggccgagcggtt 718
>gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_D09_A002 5', mRNA sequence
Length = 822
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 68 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 127
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 128 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 187
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 188 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 247
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 248 gtcgcaggtcatcctgcagtacatcgacgaagctttc 284
Score = 69.9 bits (35), Expect = 4e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 441 gcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgga 500
||||||||||| ||||| |||| | ||||| ||| ||| |||||| ||||||||||
Sbjct: 447 gcgctggagaccttggagggggcgctgagggactgcggcaaagggaagcccttcttcggc 506
Query: 501 ggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 507 ggcgacagcgtcgggttcgtggacgtcgtgctcggcggc 545
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 315 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 368
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggacgccgctgctggcggcgtgggcggagcggttctgcgcgctgga 646
|||| |||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 607 ggactccgcagctggcggcgtggtcggagcgctttggcgcgctgga 652
>gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D04_A002 5', mRNA sequence
Length = 759
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 79 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 138
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 139 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 198
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 199 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 258
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 259 gtcgcaggtcatcctgcagtacatcgacgaagctttc 295
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 326 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 379
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggacgccgctgctggcggcgtgggcggagcggttctgcgcgctgga 646
|||| |||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 561 ggactccgcagctggcggcgtggtcggagcgctttggcgcgctgga 606
>gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_48_C12_A002 5', mRNA sequence
Length = 511
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 175 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 234
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 235 acaacggcaagcccatctgcgagtc 259
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
|||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 339 gacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacggcaag 392
>gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_D02_A002 5', mRNA sequence
Length = 741
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 80 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 139
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 140 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 199
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 200 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 259
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 260 gtcgcaggtcatcctgcagtacatcgacgaagctttc 296
Score = 69.9 bits (35), Expect = 4e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 441 gcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgga 500
||||||||||| ||||| |||| | ||||| ||| ||| |||||| ||||||||||
Sbjct: 459 gcgctggagaccttggagggggcgctgagggactgcggcaaagggaagcccttcttcggc 518
Query: 501 ggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 519 ggcgacagcgtcgggttcgtggacgtcgtgctcggcggc 557
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||| | ||||||||||||||| ||||| |||| ||||||
Sbjct: 327 gacccctacgaacgcgccgtcgctcgcttctgggccgcctacatcgatgacaag 380
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggacgccgctgctggcggcgtgggcggagcggttctgcgcgctgga 646
|||| |||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 619 ggactccgcagctggcggcgtggtcggagcgctttggcgcgctgga 664
>gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_F02_A002 5', mRNA sequence
Length = 733
Score = 113 bits (57), Expect = 3e-023
Identities = 177/217 (81%)
Strand = Plus / Plus
Query: 62 gctgctggggttatgggcgagcccgttcgtgctccgggcgcgcatcgcgctcagcctcaa 121
||||||||| | ||||||||||||| |||||| |||| | |||| |||||||||||
Sbjct: 71 gctgctgggtatgtgggcgagcccgtacgtgctgcgggtgaaactcgctctcagcctcaa 130
Query: 122 aggcctcacctacgcatactccgaggagaacctcgacgacaagagcgagcttctcctcag 181
||||| | ||||| ||| ||||||| | ||| |||||||||||||| |||||||
Sbjct: 131 gggcctgagctacgagtacgtcgaggaggatctcagggacaagagcgagctcctcctcaa 190
Query: 182 ctccaaccccgtgctcaagaaggtgcccgtgctcatccaccacggcaagcccgtctgcga 241
||||||||||| | || ||||| ||||||||||||||| |||| || |||||||| ||
Sbjct: 191 atccaaccccgtccacagcaaggttcccgtgctcatccacaacggaaaacccgtctgtga 250
Query: 242 gtcccagatcatcgtgcagtacgtcgacgaggctttc 278
||| ||| ||||| |||||||| ||||||| ||||||
Sbjct: 251 gtcgcaggtcatcctgcagtacatcgacgaagctttc 287
Score = 69.9 bits (35), Expect = 4e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 441 gcgctggagacgctggagcaggcgttcagggagtgctccaaggggaaggccttcttcgga 500
||||||||||| ||||| |||| | ||||| ||| ||| |||||| ||||||||||
Sbjct: 450 gcgctggagaccttggagggggcgctgagggactgcggcaaagggaagcccttcttcggc 509
Query: 501 ggggacagcgtggggctcgtcgacgtcgtgctcggcggc 539
|| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 510 ggcgacagcgtcgggttcgtggacgtcgtgctcggcggc 548
Score = 67.9 bits (34), Expect = 1e-009
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||
Sbjct: 318 gacccctacgaacgcgccatcgctcgcttctgggccgcctacatcgatgacaag 371
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 601 ggacgccgctgctggcggcgtgggcggagcggttctgcgcgctgga 646
|||| |||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 610 ggactccgcagctggcggcgtggtcggagcgctttggcgcgctgga 655
>gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_B06_A002 5', mRNA sequence
Length = 760
Score = 113 bits (57), Expect = 3e-023
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 160 acaagagcgagcttctcctcagctccaaccccgtgctcaagaaggtgcccgtgctcatcc 219
|||||||||| || ||||||| |||||||||||||| ||||||||| |||||||||||||
Sbjct: 179 acaagagcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatcc 238
Query: 220 accacggcaagcccgtctgcgagtc 244
|| ||||||||||| ||||||||||
Sbjct: 239 acaacggcaagcccatctgcgagtc 263
Score = 60.0 bits (30), Expect = 4e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 309 gacccctacgaccgcgccattgctcgcttctgggcctcctacgtcgacgacaag 362
|||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 343 gacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacggcaag 396
Score = 50.1 bits (25), Expect = 4e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 606 ccgctgctggcggcgtgggcggagcggtt 634
|||||||||||||||||||| ||||||||
Sbjct: 670 ccgctgctggcggcgtgggccgagcggtt 698
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 376,237
Number of Sequences: 832831
Number of extensions: 376237
Number of successful extensions: 132305
Number of sequences better than 0.5: 343
Number of HSP's better than 0.5 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131230
Number of HSP's gapped (non-prelim): 1002
length of query: 884
length of database: 491,359,669
effective HSP length: 20
effective length of query: 864
effective length of database: 474,703,049
effective search space: 410143434336
effective search space used: 410143434336
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)