BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430946.2.3
(3896 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 1511 0.0
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 1217 0.0
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 1185 0.0
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 1092 0.0
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 1066 0.0
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 1053 0.0
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 1031 0.0
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 1023 0.0
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 1019 0.0
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 1019 0.0
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 1003 0.0
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 1001 0.0
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 987 0.0
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 983 0.0
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 952 0.0
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 934 0.0
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 896 0.0
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 870 0.0
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 803 0.0
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 793 0.0
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 765 0.0
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 753 0.0
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 751 0.0
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 743 0.0
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 720 0.0
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 704 0.0
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 686 0.0
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 686 0.0
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 678 0.0
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 674 0.0
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 664 0.0
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 660 0.0
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 658 0.0
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 640 0.0
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 624 e-176
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 620 e-175
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 613 e-173
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 609 e-172
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 585 e-164
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 581 e-163
gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle... 535 e-149
gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle... 523 e-146
gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (L... 507 e-141
gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient se... 504 e-140
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 502 e-139
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 486 e-135
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 482 e-133
gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle... 474 e-131
gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle... 464 e-128
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 460 e-127
gb|BG947491.1|BG947491 IP1_5_A08.g1_A002 Immature pannicle ... 460 e-127
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 456 e-126
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 448 e-123
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 444 e-122
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 440 e-121
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 440 e-121
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 434 e-119
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 424 e-116
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 422 e-115
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 420 e-115
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 398 e-108
gb|CF072157.1|CF072157 FE1_5_C06.b1_A002 Iron-deficient see... 398 e-108
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 396 e-108
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 391 e-106
gb|CW443882.1|CW443882 fsbb001f164d11k0 Sorghum methylation... 387 e-105
gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Me... 369 1e-099
gb|BI141322.1|BI141322 IP1_54_D04.g1_A002 Immature pannicle... 357 5e-096
gb|CW385344.1|CW385344 fsbb001f068m13f0 Sorghum methylation... 355 2e-095
gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Me... 353 8e-095
gb|BI212094.1|BI212094 IP1_61_F01.g1_A002 Immature pannicle... 339 1e-090
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 335 2e-089
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 327 4e-087
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 325 2e-086
gb|BI141454.1|BI141454 IP1_56_C04.g1_A002 Immature pannicle... 325 2e-086
gb|BG947184.1|BG947184 IP1_3_E08.g1_A002 Immature pannicle ... 307 4e-081
gb|BI141399.1|BI141399 IP1_55_E02.g1_A002 Immature pannicle... 297 4e-078
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 285 2e-074
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 268 4e-069
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 236 1e-059
gb|BG049087.1|BG049087 OV1_23_B06.g1_A002 Ovary 1 (OV1) Sor... 232 2e-058
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 192 2e-046
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 188 3e-045
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 180 6e-043
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 172 2e-040
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 172 2e-040
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 167 1e-038
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 161 6e-037
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 155 4e-035
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 147 9e-033
gb|CF072554.1|CF072554 FE1_3_B12.g1_A002 Iron-deficient see... 147 9e-033
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 145 4e-032
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 143 1e-031
gb|BG053825.1|BG053825 RHIZ2_10_C07.b1_A003 Rhizome2 (RHIZ2... 141 6e-031
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 139 2e-030
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 135 3e-029
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 131 5e-028
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 131 5e-028
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 131 5e-028
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 131 5e-028
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 125 3e-026
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 125 3e-026
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 125 3e-026
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 125 3e-026
gb|BG052407.1|BG052407 RHIZ2_13_D07.g1_A003 Rhizome2 (RHIZ2... 123 1e-025
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 117 8e-024
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 117 8e-024
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 111 5e-022
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 107 8e-021
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 107 8e-021
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 107 8e-021
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 107 8e-021
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 107 8e-021
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 107 8e-021
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 105 3e-020
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 105 3e-020
gb|BI246175.1|BI246175 IP1_67_H10.b1_A002 Immature pannicle... 103 1e-019
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 101 5e-019
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 101 5e-019
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 100 2e-018
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 96 3e-017
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 94 1e-016
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 94 1e-016
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 94 1e-016
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 92 5e-016
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 92 5e-016
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 92 5e-016
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 86 3e-014
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 86 3e-014
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 86 3e-014
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 86 3e-014
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 86 3e-014
gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Me... 84 1e-013
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 82 4e-013
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 82 4e-013
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 82 4e-013
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 82 4e-013
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 80 2e-012
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 80 2e-012
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 80 2e-012
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 80 2e-012
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 80 2e-012
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 78 7e-012
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 78 7e-012
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 78 7e-012
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 78 7e-012
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 78 7e-012
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 76 3e-011
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 76 3e-011
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 76 3e-011
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 76 3e-011
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 76 3e-011
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 76 3e-011
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 76 3e-011
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 74 1e-010
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 74 1e-010
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 74 1e-010
gb|CX607922.1|CX607922 ANR1_31_C06.g1_A002 Anaerobic roots ... 74 1e-010
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 72 4e-010
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 72 4e-010
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 72 4e-010
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 72 4e-010
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 70 2e-009
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 70 2e-009
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 70 2e-009
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 70 2e-009
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 70 2e-009
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 70 2e-009
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 70 2e-009
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 70 2e-009
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 70 2e-009
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 68 7e-009
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 68 7e-009
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 66 3e-008
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 66 3e-008
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 64 1e-007
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 64 1e-007
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 64 1e-007
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 64 1e-007
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 64 1e-007
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 64 1e-007
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 64 1e-007
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 64 1e-007
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 64 1e-007
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 62 4e-007
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 62 4e-007
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 62 4e-007
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 62 4e-007
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 62 4e-007
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 62 4e-007
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 62 4e-007
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 60 2e-006
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 60 2e-006
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 60 2e-006
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 60 2e-006
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 60 2e-006
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 60 2e-006
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 58 6e-006
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 58 6e-006
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 58 6e-006
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 58 6e-006
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 56 3e-005
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 56 3e-005
gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adap... 52 4e-004
gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adap... 52 4e-004
gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adap... 52 4e-004
gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adap... 52 4e-004
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 52 4e-004
gb|CL169134.1|CL169134 104_367_10812414_116_31787_270 Sorgh... 50 0.002
gb|CL169135.1|CL169135 104_367_10812414_148_31786_270 Sorgh... 50 0.002
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 50 0.002
gb|CW117372.1|CW117372 104_493_11107621_148_34612_057 Sorgh... 50 0.002
gb|CW135314.1|CW135314 104_519_11117778_148_34825_065 Sorgh... 50 0.002
gb|CW158341.1|CW158341 104_564_11148768_148_36401_096 Sorgh... 50 0.002
gb|CW169496.1|CW169496 104_579_11154704_148_36505_024 Sorgh... 50 0.002
gb|CW344375.1|CW344375 104_847_11487921_116_36201_047 Sorgh... 50 0.002
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 50 0.002
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 50 0.002
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 50 0.002
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 50 0.002
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 50 0.002
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 50 0.002
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 50 0.002
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 50 0.002
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 50 0.002
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 50 0.002
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 50 0.002
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 50 0.002
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 50 0.002
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 50 0.002
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 50 0.002
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 48 0.006
gb|BZ369920.1|BZ369920 id13d03.g1 WGS-SbicolorF (DH5a methy... 46 0.025
gb|CL197345.1|CL197345 104_424_10943687_114_32382_092 Sorgh... 46 0.025
gb|CW042749.1|CW042749 104_276_10507261_114_30482 Sorghum m... 46 0.025
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 46 0.025
gb|CW082411.1|CW082411 104_424_10943687_114_32333_092 Sorgh... 46 0.025
gb|CW150474.1|CW150474 104_549_11143046_116_36306_049 Sorgh... 46 0.025
gb|CW150475.1|CW150475 104_549_11143046_148_36305_049 Sorgh... 46 0.025
gb|CW161497.1|CW161497 104_568_11150445_148_36434_089 Sorgh... 46 0.025
gb|CW276025.1|CW276025 104_749_11405268_148_35393_040 Sorgh... 46 0.025
gb|CW310813.1|CW310813 104_800_11469910_116_35752_093 Sorgh... 46 0.025
gb|CW310814.1|CW310814 104_800_11469910_148_35756_093 Sorgh... 46 0.025
gb|CW409141.1|CW409141 fsbb001f103f09f0 Sorghum methylation... 46 0.025
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 46 0.025
gb|BF422306.1|BF422306 FM1_13_H04.b1_A003 Floral-Induced Me... 46 0.025
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 46 0.025
gb|BG053719.1|BG053719 RHIZ2_8_H08.b1_A003 Rhizome2 (RHIZ2)... 46 0.025
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 46 0.025
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 46 0.025
gb|CB927375.1|CB927375 ABA1_25_E12.g1_A012 Abscisic acid-tr... 46 0.025
gb|CD213407.1|CD213407 HS1_40_G10.g1_A012 Heat-shocked seed... 46 0.025
gb|CD214209.1|CD214209 HS1_70_E11.g1_A012 Heat-shocked seed... 46 0.025
gb|CN126741.1|CN126741 RHOH1_18_H09.g1_A002 Acid- and alkal... 46 0.025
gb|CX611257.1|CX611257 ANR1_23_C11.g1_A002 Anaerobic roots ... 46 0.025
gb|CX619726.1|CX619726 GABR1_47_A04.g1_A002 GA- or brassino... 46 0.025
gb|U56731.1|SBU56731 Sorghum bicolor phytochrome C (PHYC) m... 46 0.025
gb|AY466453.1| Sorghum bicolor voucher PI267380 phytochrome... 46 0.025
gb|AY466454.1| Sorghum bicolor voucher PI153800 phytochrome... 46 0.025
gb|AY466455.1| Sorghum bicolor voucher PI229835 phytochrome... 46 0.025
gb|AY466456.1| Sorghum bicolor voucher PI152593 phytochrome... 46 0.025
gb|AY466457.1| Sorghum bicolor voucher NSL83707 phytochrome... 46 0.025
gb|AY466458.1| Sorghum bicolor phytochrome C (PHYC) gene, c... 46 0.025
gb|AY466459.1| Sorghum bicolor phytochrome C (PHYC) gene, c... 46 0.025
gb|AY466460.1| Sorghum arundinaceum voucher IS14569 phytoch... 46 0.025
gb|AY466461.1| Sorghum arundinaceum voucher PI213900 phytoc... 46 0.025
gb|AY466462.1| Sorghum arundinaceum voucher IS14503 phytoch... 46 0.025
gb|AY466463.1| Sorghum arundinaceum voucher IS14567 phytoch... 46 0.025
gb|AY466464.1| Sorghum arundinaceum voucher PI302105 phytoc... 46 0.025
gb|AY466465.1| Sorghum arundinaceum voucher IS14485 phytoch... 46 0.025
gb|AY466466.1| Sorghum arundinaceum voucher PI225905 phytoc... 46 0.025
gb|AY466467.1| Sorghum arundinaceum voucher PI302233 phytoc... 46 0.025
gb|AY466468.1| Sorghum x drummondii voucher PI199869 phytoc... 46 0.025
gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorgh... 44 0.097
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 44 0.097
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 44 0.097
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 44 0.097
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 44 0.097
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 44 0.097
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 44 0.097
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 44 0.097
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 44 0.097
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 44 0.097
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 44 0.097
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 44 0.097
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 44 0.097
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 44 0.097
gb|CL191570.1|CL191570 104_410_10906894_114_32535_085 Sorgh... 42 0.38
gb|CL191571.1|CL191571 104_410_10906894_116_32539_085 Sorgh... 42 0.38
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 42 0.38
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 42 0.38
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 1511 bits (762), Expect = 0.0
Identities = 819/838 (97%)
Strand = Plus / Minus
Query: 1932 tcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctagagctgga 1991
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 848 tcaatgccatcgaatctttgtggaaattgtacataacaagttttccttcgtagagccgga 789
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 788 tccatcatgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaa 729
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 2111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 669
Query: 2112 attgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagaca 2171
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 668 attgcaccagccttcttgtgatgctggaagcctggtctcttttcacgagagacatagaca 609
Query: 2172 agacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctga 2231
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 608 agacgcggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaacacctga 549
Query: 2232 atcatgccaggatggtccctagggttattcccaggccaagcagttccatcagccatggtc 2291
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 548 atcatgccaggatggtccctaggattattcccaggccaagcagttccatcagccatggtc 489
Query: 2292 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaat 2351
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 488 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaat 429
Query: 2352 tcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcc 2411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcc 369
Query: 2412 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 2471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 309
Query: 2472 ttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaa 2531
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 308 ttcttacaaaagggaacccactttctagcaaattctgcggtttctgagagagactcaaat 249
Query: 2532 gtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacagggtaatcc 2591
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 gtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacagggtaatcc 189
Query: 2592 acagcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatggatcc 2651
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 188 acagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatggatcc 129
Query: 2652 actgtactgacaaagacatcaatgggagccagctgtgatggctctccctctctatcatac 2711
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 128 actgtactgacgaagacatcaatgggagccagctgtgacggctctccctctctatcatac 69
Query: 2712 ctcaatgcaagcctgtcgagatatgtctcacggttgattggataccattttgggaact 2769
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaact 11
>gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 3', mRNA sequence
Length = 768
Score = 1217 bits (614), Expect = 0.0
Identities = 732/770 (95%), Gaps = 11/770 (1%)
Strand = Plus / Minus
Query: 2443 attctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaa 2502
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 768 attctggagctcttggttca-tattgtgcttcttacaaa-gggaacccactttctagcaa 711
Query: 2503 attcggcagtttcagagagagactcaaaagtcagcatagctgagccatcatcagaaacat 2562
|||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 710 attctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacat 651
Query: 2563 agcatgacactttgtcaacagggtaatccacagcaagaatggacaaaacagtgttggctg 2622
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 650 agcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccg 591
Query: 2623 tgatcagtggaggttccttcaatggatccactgtactgacaaagacatcaatgggagcca 2682
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 590 tgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagcca 531
Query: 2683 gctgtgatggctctccctctctatcatacctcaatgcaagcctgtcgagatatgtctcac 2742
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 530 gctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcac 471
Query: 2743 ggttgattggataccattttgggaactgatctagaagccaggacaaggcaaaccagacct 2802
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 470 ggttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacct 411
Query: 2803 cacagataacagatactagccacaatccataagcattacgcactggatgactgatacgat 2862
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 410 cacagataacagatactagccacaatccataagcattattcactggatgactgacacgat 351
Query: 2863 attggaagaagaagcacaggatgataagacggagaatgattactatccggtaaaggttga 2922
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 350 attggaagaagaagcacaggatgataagacggagaatgatcactatccggtaaaggttga 291
Query: 2923 gctggtttgaggaaattggcacaatgcggctcaaaggtaggcgtgcatcatcaaccattt 2982
|||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 290 gctggtttgagggaattggcacaatacggctcaaaggtagccgtgcatcatcaaccattt 231
Query: 2983 gcatatcttctccatttgagccagtcccctccatgtct---------cctctagcctctg 3033
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 230 gcatatcttctccatttgagccagtcccctccatgtctcctcctcctcctctagcctctg 171
Query: 3034 gatatttattagtcacttgcaacatatttttgtcctgtttaaccctccagctctcaactc 3093
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 170 gatatttattagtcacttgcatcatatttttgtcctgtttaactctccagctctcaactc 111
Query: 3094 tttctttccagtcaacactattaagcccataggaattcaagtccttcgaggggtccacaa 3153
|||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 110 tttccttccagtcaacactattaagcccataagaattcaagtcctttgaggggtccacaa 51
Query: 3154 tcctcacaggaactggaacgcttggatcaacatagctcgatgttggactg 3203
||| |||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 50 tccgcacaggaactgggacgcttggatcaacatagcttgatgttggactg 1
>gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 5', mRNA sequence
Length = 669
Score = 1185 bits (598), Expect = 0.0
Identities = 648/665 (97%)
Strand = Plus / Minus
Query: 2139 aagcctggtctcttttcacgagagacatagacaagacgtggtaattcatttccatcagtg 2198
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 665 aagcctggtctcttttcacgagagacatagacaagacgcggtaattcatttccatcagtg 606
Query: 2199 tcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtccctagggtta 2258
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 605 tcaagaccaccactgtgccccaagaacacctgaatcatgccaggatggtccctaggatta 546
Query: 2259 ttcccaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgct 2318
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgct 486
Query: 2319 ttggcaacaagggcattgattcttattttgaattcttcatactctctcttcattgctcgt 2378
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 485 ttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgctcgt 426
Query: 2379 ctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaag 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaag 366
Query: 2439 taaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttcta 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 taaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttcta 306
Query: 2499 gcaaattcggcagtttcagagagagactcaaaagtcagcatagctgagccatcatcagaa 2558
|||||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 305 gcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaa 246
Query: 2559 acatagcatgacactttgtcaacagggtaatccacagcaagaatggacaaaacagtgttg 2618
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttg 186
Query: 2619 gctgtgatcagtggaggttccttcaatggatccactgtactgacaaagacatcaatggga 2678
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 185 gccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatggga 126
Query: 2679 gccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcgagatatgtc 2738
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 125 gccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtc 66
Query: 2739 tcacggttgattggataccattttgggaactgatctagaagccaggacaaggcaaaccag 2798
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 65 tcacggttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccag 6
Query: 2799 acctc 2803
|||||
Sbjct: 5 acctc 1
>gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 1092 bits (551), Expect = 0.0
Identities = 581/591 (98%)
Strand = Plus / Minus
Query: 1512 gttgaaggtggtatgccaccttgagtcataaaggtggatgcaatgaagattggagactga 1571
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 599 gttgaaggtggtatgccaccttgagtcataaaggtggatgcaatgaaaattggagactga 540
Query: 1572 ccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacct 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacct 480
Query: 1632 tcaataccctcctcgatgtcttccatgttaaagatgggagctgaagattctgttctcttc 1691
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 479 tcaataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttc 420
Query: 1692 ataatacggctttgactatccatataactcttgttctttctcttccttctaccacagcag 1751
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 419 ataatacggctttgactatccatataacttttgttctttttcttccttctaccacagcag 360
Query: 1752 ctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatac 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatac 300
Query: 1812 aaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatct 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatct 240
Query: 1872 agacctttcatgttgatatcaaagaagactatgttccgattagcatatcgatcgtgcaag 1931
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 239 agacctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatg 180
Query: 1932 tcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctagagctgga 1991
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 179 tcaatgccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccgga 120
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 119 tccatcatgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaa 60
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatc 2102
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatc 9
>gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068m13, DNA
sequence
Length = 659
Score = 1067 bits (538), Expect = 0.0
Identities = 601/622 (96%)
Strand = Plus / Minus
Query: 462 tgagcctcttcaaataagagtcacaatctggatcagcagttcacaccacattgccccaag 521
|||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 636 tgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgccccaag 577
Query: 522 gcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagtaaggagaag 581
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 576 gcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaag 517
Query: 582 atagatgcaaggaggatggaccaaacgatgacgattgttggcgtgcggttctgcctgccc 641
|| || || |||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 516 atggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgccc 457
Query: 642 atgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagcttt 701
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 456 atgagacccttcaggaaggggtacagatggaggatcacccagatcgagaagaacagcttt 397
Query: 702 ccaaagagcggaccccaggattggtagccgctgttaatggcatacgaaattcctgccacc 761
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 396 ccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccacc 337
Query: 762 attccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtccacttg 821
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 336 attccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttg 277
Query: 822 aacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaag 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaag 217
Query: 882 ttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagatgggca 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagatgggca 157
Query: 942 gaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacacca 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacacca 97
Query: 1002 ctccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaagaatgaagaac 1061
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96 ctccatctgagttccaatataccagtggcaaaaatggaggcgaaaagaagaatgaagaac 37
Query: 1062 attccagcataattactaatct 1083
|| |||||||| ||||||||||
Sbjct: 36 atcccagcatagttactaatct 15
>gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 1053 bits (531), Expect = 0.0
Identities = 614/639 (96%), Gaps = 2/639 (0%)
Strand = Plus / Minus
Query: 1044 aaaagaagaatgaagaacattcc-agcataattactaatctcaggaatgataaatttatt 1102
|||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 646 aaaagaagaatgaaga-catccccagcatagttactaatctcaggaatgataaatttatt 588
Query: 1103 ggtaagaagacagatagcaggaagcacacaataggcgataagcggaacagatgtgattgg 1162
|||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 587 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 528
Query: 1163 ataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagcc 1222
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 527 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 468
Query: 1223 ataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaacggag 1282
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 467 ataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggag 408
Query: 1283 cacctgattaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtgg 1342
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 407 cacctgattaagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtgg 348
Query: 1343 tggcatgcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaatatc 1402
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 347 tggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatc 288
Query: 1403 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgta 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 287 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 228
Query: 1463 cccacagctgataacatggatagcttccttcagtagagaagctgggtttgttgaaggtgg 1522
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 227 cccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 168
Query: 1523 tatgccaccttgagtcataaaggtggatgcaatgaagattggagactgaccaaagcgttt 1582
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 167 tatgccaccttgagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgttt 108
Query: 1583 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 48
Query: 1643 ctcgatgtcttccatgttaaagatgggagctgaagattc 1681
||||||||||||||||| ||||||||||||||||||||
Sbjct: 47 ttcgatgtcttccatgttgaagatgggagctgaagattc 9
>gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 638
Score = 1031 bits (520), Expect = 0.0
Identities = 612/639 (95%), Gaps = 4/639 (0%)
Strand = Plus / Plus
Query: 390 catcctcatctacaacaaaaaatt-cccatctagccccctcaggtatttacacgaggggg 448
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 1 catcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgaggggg 60
Query: 449 --gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttcaca 506
| |||||| | |||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 61 cagacgatctt-gattgagcctcttcaaataagagtcacggtctcgatcagcagttcaca 119
Query: 507 ccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacc 566
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacc 179
Query: 567 cacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggcgtg 626
||||| ||||||||||| || || |||||||||||||| || |||||||||||||| |||
Sbjct: 180 cacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttggtgtg 239
Query: 627 cggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccagatc 686
|||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 240 cggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcacccagatc 299
Query: 687 gagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggcatac 746
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 300 gagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggcatac 359
Query: 747 gaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatgagc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 360 gaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagc 419
Query: 807 aaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgccttt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgccttt 479
Query: 867 gaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacacc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacacc 539
Query: 927 gcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatct 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatct 599
Query: 987 tcaatgccaacaccactccatctgagctccaatatacca 1025
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 600 tcaatgccaacaccactccatctgagttccaatatacca 638
>gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 610
Score = 1023 bits (516), Expect = 0.0
Identities = 578/599 (96%)
Strand = Plus / Minus
Query: 729 ccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaagaaca 788
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 607 ccgctgttgatggcatacgaaattcntgccaccattccgaccaggttaatgacaagaaca 548
Query: 789 gtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgcca 848
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtggtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgcca 488
Query: 849 tcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttc 428
Query: 909 agcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgc 368
Query: 969 tcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatataccagtg 1028
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 367 tcatttctccaccaatcttcaatgccaacaccactccatctgagttccaatataccagtg 308
Query: 1029 gcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctcagga 1088
|| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 307 gcaaaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaatctcagga 248
Query: 1089 atgataaatttattggtaagaagacagatagcaggaagcacacaataggcgataagcgga 1148
|||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 247 atgataaatttattggtaaggagacagatagcaggaagaacacaataggcaataagcgga 188
Query: 1149 acagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaat 1208
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 187 atggatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagt 128
Query: 1209 cgcccattgtagccataccatataggacaatgtctgctaagcagaatttccactgaccca 1268
|| |||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 127 cggccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgaccca 68
Query: 1269 agagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaaccctt 1327
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 67 agagcccaacggagcacctgattaagacgatcagagagattgattggtgcagaaccctt 9
>gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 598
Score = 1019 bits (514), Expect = 0.0
Identities = 571/590 (96%)
Strand = Plus / Minus
Query: 738 atggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcgga 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atggcatacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcgga 539
Query: 798 gggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatca 857
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatca 479
Query: 858 gatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccc 419
Query: 918 tggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctc 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctc 359
Query: 978 caccaatcttcaatgccaacaccactccatctgagctccaatataccagtggcgaaaatg 1037
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 358 caccaatcttcaatgccaacaccactccatctgagttccaatataccagtggcaaaaatg 299
Query: 1038 gaggcgaaaagaagaatgaagaacattccagcataattactaatctcaggaatgataaat 1097
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 298 gaggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaat 239
Query: 1098 ttattggtaagaagacagatagcaggaagcacacaataggcgataagcggaacagatgtg 1157
||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 238 ttattggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtg 179
Query: 1158 attggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattg 1217
|||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 178 attggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattg 119
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
|| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 118 taaccataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaa 59
Query: 1278 cggagcacctgattaagacgatcagaaagattgataggtgcagaaccctt 1327
|||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 58 cggagcacctgattaagacgatcagagagattgattggtgcagaaccctt 9
>gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 1019 bits (514), Expect = 0.0
Identities = 587/610 (96%), Gaps = 1/610 (0%)
Strand = Plus / Minus
Query: 1043 gaaaagaagaatgaagaacattccagcataattactaatctcaggaatgataaatttatt 1102
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 617 gaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaatttat- 559
Query: 1103 ggtaagaagacagatagcaggaagcacacaataggcgataagcggaacagatgtgattgg 1162
|||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 558 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 499
Query: 1163 ataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagcc 1222
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 498 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 439
Query: 1223 ataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaacggag 1282
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 438 ataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggag 379
Query: 1283 cacctgattaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtgg 1342
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 378 cacctgattaagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtgg 319
Query: 1343 tggcatgcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaatatc 1402
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 318 tggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatc 259
Query: 1403 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgta 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 258 ctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 199
Query: 1463 cccacagctgataacatggatagcttccttcagtagagaagctgggtttgttgaaggtgg 1522
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 198 cccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 139
Query: 1523 tatgccaccttgagtcataaaggtggatgcaatgaagattggagactgaccaaagcgttt 1582
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 138 tatgccaccttgagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgttt 79
Query: 1583 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 19
Query: 1643 ctcgatgtct 1652
|||||||||
Sbjct: 18 ttcgatgtct 9
>gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 1003 bits (506), Expect = 0.0
Identities = 533/542 (98%)
Strand = Plus / Minus
Query: 1763 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 491
Query: 1823 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 431
Query: 1883 gttgatatcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatc 1942
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 430 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 371
Query: 1943 aaatctttgtggaaattgtacataacaagttttccttcctagagctggatccatcatgaa 2002
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 370 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 311
Query: 2003 gcacattgcttctctaagagctttgctgctattgaagtaatggtcacaatccacattgag 2062
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 310 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 251
Query: 2063 aagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagc 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagc 191
Query: 2123 cttcttgtgatgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaa 2182
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 cttcttgtgatgctggaagcctggtctcttttcacgagagacatagacaagacgcggtaa 131
Query: 2183 ttcatttccatcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccagg 2242
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttcatttccatcagtgtcaagaccaccactgtgccccaagaacacctgaatcatgccagg 71
Query: 2243 atggtccctagggttattcccaggccaagcagttccatcagccatggtccacccctcttc 2302
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggtccctaggattattcccaggccaagcagttccatcagccatggtccacccctcttc 11
Query: 2303 ag 2304
||
Sbjct: 10 ag 9
>gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 1001 bits (505), Expect = 0.0
Identities = 562/581 (96%)
Strand = Plus / Minus
Query: 683 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 589 gatcgagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggc 530
Query: 743 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggat 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 529 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaat 470
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 410
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 350
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 290
Query: 983 atcttcaatgccaacaccactccatctgagctccaatataccagtggcgaaaatggaggc 1042
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 289 atcttcaatgccaacaccactccatctgagttccaatataccagtggcaaaaatggaggc 230
Query: 1043 gaaaagaagaatgaagaacattccagcataattactaatctcaggaatgataaatttatt 1102
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 229 gaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaatttatt 170
Query: 1103 ggtaagaagacagatagcaggaagcacacaataggcgataagcggaacagatgtgattgg 1162
|||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 169 ggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgg 110
Query: 1163 ataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagcc 1222
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 109 ataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacc 50
Query: 1223 ataccatataggacaatgtctgctaagcagaatttccactg 1263
|||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 49 ataccagataggacaatgtctgctgagcaaaatttccactg 9
>gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 987 bits (498), Expect = 0.0
Identities = 536/549 (97%)
Strand = Plus / Minus
Query: 1463 cccacagctgataacatggatagcttccttcagtagagaagctgggtttgttgaaggtgg 1522
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 556 cccacagctgattacatggatagcttcctttagtagagaagctgggtttgttgaaggtgg 497
Query: 1523 tatgccaccttgagtcataaaggtggatgcaatgaagattggagactgaccaaagcgttt 1582
|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 496 tatgccacctgnagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgttt 437
Query: 1583 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctc 377
Query: 1643 ctcgatgtcttccatgttaaagatgggagctgaagattctgttctcttcataatacggct 1702
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttcataatacggct 317
Query: 1703 ttgactatccatataactcttgttctttctcttccttctaccacagcagctcttaacaac 1762
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 316 ttgactatccatataacttttgttctttttcttccttctaccacagcagctcttaacaac 257
Query: 1763 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 197
Query: 1823 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 137
Query: 1883 gttgatatcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatc 1942
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 136 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 77
Query: 1943 aaatctttgtggaaattgtacataacaagttttccttcctagagctggatccatcatgaa 2002
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 76 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 17
Query: 2003 gcacattgc 2011
|||||||||
Sbjct: 16 gcacattgc 8
>gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 983 bits (496), Expect = 0.0
Identities = 535/548 (97%)
Strand = Plus / Minus
Query: 2265 ggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 497
Query: 2325 acaagggcattgattcttattttgaattcttcatactctctcttcattgctcgtctttcc 2384
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acaagggcattgattcttactttgaattcttcatactctctcttcattgctcgtctttcc 437
Query: 2385 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 377
Query: 2445 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 317
Query: 2505 tcggcagtttcagagagagactcaaaagtcagcatagctgagccatcatcagaaacatag 2564
|| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 316 tctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacatag 257
Query: 2565 catgacactttgtcaacagggtaatccacagcaagaatggacaaaacagtgttggctgtg 2624
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 256 catgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccgtg 197
Query: 2625 atcagtggaggttccttcaatggatccactgtactgacaaagacatcaatgggagccagc 2684
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 196 atcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagc 137
Query: 2685 tgtgatggctctccctctctatcatacctcaatgcaagcctgtcgagatatgtctcacgg 2744
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 136 tgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacgg 77
Query: 2745 ttgattggataccattttgggaactgatctagaagccaggacaaggcaaaccagacctca 2804
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 76 ttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacctca 17
Query: 2805 cagataac 2812
||||||||
Sbjct: 16 cagataac 9
>gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 631
Score = 952 bits (480), Expect = 0.0
Identities = 581/611 (95%), Gaps = 4/611 (0%)
Strand = Plus / Minus
Query: 327 gcagcagcaccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcag 386
|||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 618 gcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaa 559
Query: 387 atccatcctcatctacaacaaaaaatt-cccatctagccccctcaggtatttacacgagg 445
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 558 atccatcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagg 499
Query: 446 ggg--gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttc 503
||| | |||||| | |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 498 gggcagacgatctt-gattgagcctcttcaaataagagtcacggtctcgatcagcagttc 440
Query: 504 acaccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 380
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 379 acccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttggt 320
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 319 gtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcacccag 260
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 259 atcgagaagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggca 200
Query: 744 tacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatg 803
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 199 tacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaatg 140
Query: 804 agcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcc 80
Query: 864 tttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaac 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaac 20
Query: 924 accgcgaagag 934
|||||||||||
Sbjct: 19 accgcgaagag 9
>gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 591
Score = 934 bits (471), Expect = 0.0
Identities = 525/543 (96%)
Strand = Plus / Minus
Query: 541 gggagatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatgg 600
||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||||
Sbjct: 591 gggagatgaaaggatcgatcttcacccacagcaaggagaagatggtcgcgaggaggatgg 532
Query: 601 accaaacgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaagg 660
|||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 531 accagacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagg 472
Query: 661 ggtagagatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccagg 720
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ggtacagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccagg 412
Query: 721 attggtagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatga 780
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attggtaaccgctgttgatggcatacgaaattcctgccaccattccgaccaggttaatga 352
Query: 781 caagaacagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaa 840
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caagaacagtggtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaa 292
Query: 841 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 232
Query: 901 acactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccc 172
Query: 961 aaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaata 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 171 aaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagttccaata 112
Query: 1021 taccagtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaa 1080
|||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 111 taccagtggcaaaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaa 52
Query: 1081 tct 1083
|||
Sbjct: 51 tct 49
>gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_E05_A002 3', mRNA sequence
Length = 768
Score = 896 bits (452), Expect = 0.0
Identities = 683/752 (90%), Gaps = 19/752 (2%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||| | ||||||||||||||||||||||||
Sbjct: 749 tacaacagctgcctttttatatagttgtgctaaaaaattacagtgttctgactgtttgct 690
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 689 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 632
Query: 197 gtgaatagttacctcaaacaaat---aatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 631 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 572
Query: 254 nnnn-tgcagaattcacaatttacgctgctggccagcactacaagcaatgtagaaa-ggc 311
|||| |||||||||||||||||||||||| | ||||| |||| ||| ||| |||
Sbjct: 571 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtaaaaaaggc 512
Query: 312 tccatgatttt--gtctgcagcagca---ccggcaccggcaccgaagaagctaataaaca 366
||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||
Sbjct: 511 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaaca 452
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaatt-cccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 451 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 392
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||
Sbjct: 391 cctcaggtatttacacgagggggcagacgatctt-gattgagcctcttcaaataagagtc 333
Query: 484 acaatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggg 543
|| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 332 acggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcgggg 273
Query: 544 agatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggacc 603
|||||||||||||||||||||||||||| ||||| || || || || |||||||||||||
Sbjct: 272 agatgaaaggatcgatcttcacccacagcaaggaaaaaatggacgcgaggaggatggacc 213
Query: 604 aaacgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggt 663
|||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 212 aaacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaaggggt 153
Query: 664 agagatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggatt 723
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 acagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggatt 93
Query: 724 ggtagccgctgttaatggcatacgaaattcctgccaccattccgaccaggttaatgacaa 783
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ggtaaccgctgttgatggcatacgaaattcctgccaccattccgaccaggttaatgacaa 33
Query: 784 gaacagtggtcggagggatgagcaaactggtc 815
|||||||||||||||| |||||||||||||||
Sbjct: 32 gaacagtggtcggaggaatgagcaaactggtc 1
>gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 870 bits (439), Expect = 0.0
Identities = 474/486 (97%)
Strand = Plus / Minus
Query: 2257 tattcccaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtg 2316
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tattcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtg 435
Query: 2317 ctttggcaacaagggcattgattcttattttgaattcttcatactctctcttcattgctc 2376
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 434 ctttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgctc 375
Query: 2377 gtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaa 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaa 315
Query: 2437 agtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttc 2496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttc 255
Query: 2497 tagcaaattcggcagtttcagagagagactcaaaagtcagcatagctgagccatcatcag 2556
|||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 254 tagcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcag 195
Query: 2557 aaacatagcatgacactttgtcaacagggtaatccacagcaagaatggacaaaacagtgt 2616
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgt 135
Query: 2617 tggctgtgatcagtggaggttccttcaatggatccactgtactgacaaagacatcaatgg 2676
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 134 tggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgg 75
Query: 2677 gagccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcgagatatg 2736
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 74 gagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatg 15
Query: 2737 tctcac 2742
||||||
Sbjct: 14 tctcac 9
>gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 511
Score = 803 bits (405), Expect = 0.0
Identities = 456/473 (96%)
Strand = Plus / Minus
Query: 462 tgagcctcttcaaataagagtcacaatctggatcagcagttcacaccacattgccccaag 521
|||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 481 tgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgccccaag 422
Query: 522 gcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagtaaggagaag 581
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 421 gcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaag 362
Query: 582 atagatgcaaggaggatggaccaaacgatgacgattgttggcgtgcggttctgcctgccc 641
|| || || |||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 361 atggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgccc 302
Query: 642 atgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagcttt 701
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 301 atgagacccttcaggaaggggtacagatggaggatcacccagatcgagaagaacagcttt 242
Query: 702 ccaaagagcggaccccaggattggtagccgctgttaatggcatacgaaattcctgccacc 761
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 241 ccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccacc 182
Query: 762 attccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtccacttg 821
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 attccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttg 122
Query: 822 aacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaag 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaag 62
Query: 882 ttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagag 934
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagag 9
>gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_F11_A002 3', mRNA sequence
Length = 688
Score = 793 bits (400), Expect = 0.0
Identities = 622/688 (90%), Gaps = 19/688 (2%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 685 tacaacagctgcctttttatatagttgtgctaagaaattacagtgttctgactgtttgct 626
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 568
Query: 197 gtgaatagttacctcaaacaaat---aatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 567 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 508
Query: 254 nnnn-tgcagaattcacaatttacgctgctggccagcactacaagcaatgtagaaa-ggc 311
|||| |||||||||||||||||||||||| | ||||| |||| ||||||| |||
Sbjct: 507 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaaggc 448
Query: 312 tccatgatttt--gtctgcagcagca---ccggcaccggcaccgaagaagctaataaaca 366
||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||
Sbjct: 447 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaaca 388
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaatt-cccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 387 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 328
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||
Sbjct: 327 cctcaggtatttacacgagggggcagacgatctt-gattgagcctcttcaaataagagtc 269
Query: 484 acaatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggg 543
|| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 268 acggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcgggg 209
Query: 544 agatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggacc 603
|||||||||||||||||||||||| ||| ||||||||||| || || |||||||||||||
Sbjct: 208 agatgaaaggatcgatcttcacccgcagcaaggagaagatggacgcgaggaggatggacc 149
Query: 604 aaacgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggt 663
| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 148 agacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaaggggt 89
Query: 664 agagatgaaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggatt 723
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 acagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccaggatt 29
Query: 724 ggtagccgctgttaatggcatacgaaat 751
|||| |||||||| ||||||||||||||
Sbjct: 28 ggtaaccgctgttgatggcatacgaaat 1
>gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 465
Score = 765 bits (386), Expect = 0.0
Identities = 425/438 (97%)
Strand = Plus / Minus
Query: 2587 aatccacagcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatg 2646
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 465 aatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatg 406
Query: 2647 gatccactgtactgacaaagacatcaatgggagccagctgtgatggctctccctctctat 2706
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 405 gatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctctat 346
Query: 2707 catacctcaatgcaagcctgtcgagatatgtctcacggttgattggataccattttggga 2766
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 345 catacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggga 286
Query: 2767 actgatctagaagccaggacaaggcaaaccagacctcacagataacagatactagccaca 2826
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 actgatcaagaagccaagacaaggcaaaccagacctcacagataacagatactagccaca 226
Query: 2827 atccataagcattacgcactggatgactgatacgatattggaagaagaagcacaggatga 2886
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 225 atccataagcattattcactggatgactgacacgatattggaagaagaagcacaggatga 166
Query: 2887 taagacggagaatgattactatccggtaaaggttgagctggtttgaggaaattggcacaa 2946
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 165 taagacggagaatgatcactatccggtaaaggttgagctggtttgagggaattggcacaa 106
Query: 2947 tgcggctcaaaggtaggcgtgcatcatcaaccatttgcatatcttctccatttgagccag 3006
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tacggctcaaaggtagccgtgcatcatcaaccatttgcatatcttctccatttgagccag 46
Query: 3007 tcccctccatgtctcctc 3024
||||||||||||||||||
Sbjct: 45 tcccctccatgtctcctc 28
>gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_28_F11_A002 5', mRNA sequence
Length = 452
Score = 753 bits (380), Expect = 0.0
Identities = 434/452 (96%)
Strand = Plus / Minus
Query: 860 tgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctg 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctg 393
Query: 920 gaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcca 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcca 333
Query: 980 ccaatcttcaatgccaacaccactccatctgagctccaatataccagtggcgaaaatgga 1039
|||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 332 ccaatcttcaatgccaacaccactccatttgagttccaatataccagtggcaaaaatgga 273
Query: 1040 ggcgaaaagaagaatgaagaacattccagcataattactaatctcaggaatgataaattt 1099
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 272 ggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaattt 213
Query: 1100 attggtaagaagacagatagcaggaagcacacaataggcgataagcggaacagatgtgat 1159
||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||
Sbjct: 212 attggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgat 153
Query: 1160 tggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgta 1219
|||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 152 tggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgta 93
Query: 1220 gccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaacg 1279
|||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 92 accataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacg 33
Query: 1280 gagcacctgattaagacgatcagaaagattga 1311
|||||||||||||||||||||||| |||||||
Sbjct: 32 gagcacctgattaagacgatcagagagattga 1
>gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 418
Score = 751 bits (379), Expect = 0.0
Identities = 403/411 (98%)
Strand = Plus / Minus
Query: 1601 cataagcactgacctttcatcctcataaccttcaataccctcctcgatgtcttccatgtt 1660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 418 cataagcactgacctttcatcctcataaccttcaataccctcttcgatgtcttccatgtt 359
Query: 1661 aaagatgggagctgaagattctgttctcttcataatacggctttgactatccatataact 1720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaagatgggagctgaagattctgttctcttcataatacggctttgactatccatataact 299
Query: 1721 cttgttctttctcttccttctaccacagcagctcttaacaacaatgttaggttccagatc 1780
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tttgttctttttcttccttctaccacagcagctcttaacaacaatgttaggttccagatc 239
Query: 1781 agcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcatcctgt 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcatcctgt 179
Query: 1841 tcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaagaagac 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 178 tcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaagaaaac 119
Query: 1901 tatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgtggaaattg 1960
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 118 tatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttgtggaaattg 59
Query: 1961 tacataacaagttttccttcctagagctggatccatcatgaagcacattgc 2011
||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 58 tacataacaagttttccttcctagagccggatccatcatgaagcacattgc 8
>gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 403
Score = 743 bits (375), Expect = 0.0
Identities = 390/395 (98%)
Strand = Plus / Minus
Query: 1739 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 344
Query: 1799 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 284
Query: 1859 ctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcata 1918
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 283 ctgaatgccatctagacctttcatgttgatatcaaagaaaactatgttccgattagcata 224
Query: 1919 tcgatcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttcct 1978
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 223 tcgatcgtgcatgtcaatgccatcgaatctttgtggaaattgtacataacaagttttcct 164
Query: 1979 tcctagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaa 2038
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 163 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctgttgaa 104
Query: 2039 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 44
Query: 2099 aatcagtgcattcattgcaccagccttcttgtgat 2133
|||||||||||||||||||||||||||||||||||
Sbjct: 43 aatcagtgcattcattgcaccagccttcttgtgat 9
>gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 629
Score = 720 bits (363), Expect = 0.0
Identities = 566/625 (90%), Gaps = 17/625 (2%)
Strand = Plus / Minus
Query: 97 atagttgtcctaagagattacagtgttctgactgtttgctcacaatccgaagaatgtatc 156
|||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 621 atagttgtgctaaga-attacagtgttctgactgtttgctcacaatacaaagaatgtatc 563
Query: 157 agtctttgcgtataaataacagcattgccatatagttcgtgtgaatagttacctcaaaca 216
||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 562 agtct--gcgtataaataacagcattgccatatagttcgtgtgaacagttccctcaaaca 505
Query: 217 aat---aatttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaat 272
||| ||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 504 aatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaat 445
Query: 273 ttacgctgctggccagcactacaagcaatgtagaaa-ggctccatgatttt--gtctgca 329
|||||||||||||| | ||||| |||| ||||||| |||||||||||||| ||| |||
Sbjct: 444 ttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgca 385
Query: 330 gcagca---ccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcag 386
|||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 384 gcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaa 325
Query: 387 atccatcctcatctacaacaaaaaatt-cccatctagccccctcaggtatttacacgagg 445
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 324 atccatcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagg 265
Query: 446 ggg--gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttc 503
||| | |||||| | |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 264 gggcagacgatctt-gattgagcctcttcaaataagagtcacggtctcgatcagcagttc 206
Query: 504 acaccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 acaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 146
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 145 acccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttggt 86
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 85 gtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcacccag 26
Query: 684 atcgagaagaacagctttccaaaga 708
|||||||||||||||||||||||||
Sbjct: 25 atcgagaagaacagctttccaaaga 1
>gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 5', mRNA sequence
Length = 606
Score = 704 bits (355), Expect = 0.0
Identities = 397/411 (96%)
Strand = Plus / Plus
Query: 2614 tgttggctgtgatcagtggaggttccttcaatggatccactgtactgacaaagacatcaa 2673
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 187 tgttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaa 246
Query: 2674 tgggagccagctgtgatggctctccctctctatcatacctcaatgcaagcctgtcgagat 2733
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 247 tgggagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagat 306
Query: 2734 atgtctcacggttgattggataccattttgggaactgatctagaagccaggacaaggcaa 2793
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 307 atgtctcacggttgattggataccattttgggaactgatcaagaagccaagacaaggcaa 366
Query: 2794 accagacctcacagataacagatactagccacaatccataagcattacgcactggatgac 2853
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 367 accagacctcacagataacagatactagccacaatccataagcattattcactggatgac 426
Query: 2854 tgatacgatattggaagaagaagcacaggatgataagacggagaatgattactatccggt 2913
||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 427 tgacaccatattggaagaagaagcacaggatgataagacggagaatgatcactatccggt 486
Query: 2914 aaaggttgagctggtttgaggaaattggcacaatgcggctcaaaggtaggcgtgcatcat 2973
||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||
Sbjct: 487 aaaggttgagctggtttgagggaattggcacaatacggctcaaaggtagccgtgcatcat 546
Query: 2974 caaccatttgcatatcttctccatttgagccagtcccctccatgtctcctc 3024
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caaccatttgcatatcttctccatttgagccagtcccctccatgtctcctc 597
Score = 101 bits (51), Expect = 5e-019
Identities = 107/126 (84%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 3771 ccggcggagggcaatcagcccgtgcggccctctagatccgagcggcagcggcagcgaccg 3830
||||||||| | ||| |||||||||| |||||||||||||||||| ||| |||
Sbjct: 122 ccggcggagaccgatcggcccgtgcgggcctctagatccgagcggcggcg------acca 69
Query: 3831 ccaccatgccccagatccctcccgcttgctcgctgcaatgccgcgcagtggtggtgctgc 3890
|||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||
Sbjct: 68 ccaccatgccccggatccctccctctccctcgctgcaatgccgcgcagtggtggtggcgc 9
Query: 3891 tgctgc 3896
||||||
Sbjct: 8 tgctgc 3
>gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 385
Score = 686 bits (346), Expect = 0.0
Identities = 370/378 (97%)
Strand = Plus / Minus
Query: 1634 aataccctcctcgatgtcttccatgttaaagatgggagctgaagattctgttctcttcat 1693
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 aataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttcat 326
Query: 1694 aatacggctttgactatccatataactcttgttctttctcttccttctaccacagcagct 1753
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 325 aatacggctttgactatccatataacttttgttctttttcttccttctaccacagcagct 266
Query: 1754 cttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaa 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaa 206
Query: 1814 agcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatctag 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatctag 146
Query: 1874 acctttcatgttgatatcaaagaagactatgttccgattagcatatcgatcgtgcaagtc 1933
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 145 acctttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtc 86
Query: 1934 aatgccatcaaatctttgtggaaattgtacataacaagttttccttcctagagctggatc 1993
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 85 aatgccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccggatc 26
Query: 1994 catcatgaagcacattgc 2011
||||||||||||||||||
Sbjct: 25 catcatgaagcacattgc 8
>gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 374
Score = 686 bits (346), Expect = 0.0
Identities = 361/366 (98%)
Strand = Plus / Minus
Query: 1739 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tctaccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacagg 315
Query: 1799 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggacc 255
Query: 1859 ctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcata 1918
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 254 ctgaatgccatctagacctttcatgttgatatcaaagaaaactatgttccgattagcata 195
Query: 1919 tcgatcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttcct 1978
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 194 tcgatcgtgcatgtcaatgccatcgaatctttgtggaaattgtacataacaagttttcct 135
Query: 1979 tcctagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaa 2038
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134 tcctagagccggatccatcatgaagcacattgcttctctaagagctttgctgctgttgaa 75
Query: 2039 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gtaatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacg 15
Query: 2099 aatcag 2104
||||||
Sbjct: 14 aatcag 9
>gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 612
Score = 678 bits (342), Expect = 0.0
Identities = 541/600 (90%), Gaps = 16/600 (2%)
Strand = Plus / Minus
Query: 97 atagttgtcctaagagattacagtgttctgactgtttgctcacaatccgaagaatgtatc 156
|||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 597 atagttgtgctaagaaattacagtgttctgactgtttgctcacaatacaaagaatgtatc 538
Query: 157 agtctttgcgtataaataacagcattgccatatagttcgtgtgaatagttacctcaaaca 216
||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 537 agtct--gcgtataaataacagcattgccatatagttcgtgtgaacagttccctcaaaca 480
Query: 217 aat---aatttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaat 272
||| ||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 479 aatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaat 420
Query: 273 ttacgctgctggccagcactacaagcaatgtagaaa-ggctccatgatttt--gtctgca 329
|||||||||||||| | ||||| |||| ||||||| |||||||||||||| ||| |||
Sbjct: 419 ttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgca 360
Query: 330 gcagca---ccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcag 386
|||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 359 gcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaa 300
Query: 387 atccatcctcatctacaacaaaaaatt-cccatctagccccctcaggtatttacacgagg 445
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 299 atccatcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagg 240
Query: 446 ggg--gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttc 503
||| | |||||| | |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 239 gggcagacgatctt-gattgagcctcttcaaataagagtcacggtctcgatcagcagttc 181
Query: 504 acaccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 acaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 121
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
|||||||| ||||||||||| || || |||||||||||||| || ||||||||||||||
Sbjct: 120 acccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacgattgttggt 61
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 60 gtgcggttctgcctgcccatgagacccttcaggaaggggtacagatggaggatcacccag 1
>gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 3', mRNA sequence
Length = 611
Score = 674 bits (340), Expect = 0.0
Identities = 550/612 (89%), Gaps = 19/612 (3%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||||| || |||||||||||||||||||||
Sbjct: 608 tacaacagctgcctttttatatagttgtgctaagaaat-acagtgttctgactgtttgct 550
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 549 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 492
Query: 197 gtgaatagttacctcaaacaa---ataatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 491 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 432
Query: 254 nnnntgcagaattcacaatttacgctgctggccagcactacaagcaatgtag-aaaggct 312
|||| |||||||||||||||||||||||| | ||||| |||| |||| |||||||
Sbjct: 431 aaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaaggct 372
Query: 313 ccatgatttt--gt---ctgcagcagcaccggcaccggcaccgaagaagctaataaacag 367
|||||||||| || | |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 371 ccatgatttttagtccgcagcagcagcaccgtcaccggcaccgaagaagctaataaacag 312
Query: 368 aggcataacttggatgcagatccatcctcatctacaacaaaaaa-ttcccatctagcccc 426
||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 311 aggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcctc 252
Query: 427 ctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtca 484
|||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||
Sbjct: 251 ctcaggtatttacacgagggggcagacgatc-ttgattgagcctcttcaaataagagtca 193
Query: 485 caatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggga 544
| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 192 cggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcgggga 133
Query: 545 gatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggacca 604
||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||||
Sbjct: 132 gatgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggacca 73
Query: 605 aacgatgacgattgttggcgtgcggttctgcctgcccatgagacccttgaggaaggggta 664
|| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 72 gacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaaggggta 13
Query: 665 gagatgaaggat 676
||||| |||||
Sbjct: 12 cagatggaggat 1
>gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 612
Score = 664 bits (335), Expect = 0.0
Identities = 533/592 (90%), Gaps = 17/592 (2%)
Strand = Plus / Minus
Query: 113 attacagtgttctgactgtttgctcacaatccgaagaatgtatcagtctttgcgtataaa 172
|||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct: 589 attacagtgttctgactgtttgctcacaatacaaagaatgtatcagtct--gcgtataaa 532
Query: 173 taacagcattgccatatagttcgtgtgaatagttacctcaaacaaat---aatttactct 229
||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 531 taacagcattgccatatagttcgtgtgaacagttccctcaaacaaatgataatttactct 472
Query: 230 aaaacaataaacaccacgtatnnnnnnn--tgcagaattcacaatttacgctgctggcca 287
||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 471 aaaacaataaacaccacgtataaaaaaaaatgcaaaattcacaatttacgctgctggccg 412
Query: 288 gcactacaagcaatgtagaaa-ggctccatgatttt--gtctgcagcagca---ccggca 341
| ||||| |||| ||||||| |||||||||||||| ||| ||||||||| ||| ||
Sbjct: 411 gtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcagcaccgtca 352
Query: 342 ccggcaccgaagaagctaataaacagaggcataacttggatgcagatccatcctcatcta 401
|||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 351 ccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatcctcatcta 292
Query: 402 caacaaaaaatt-cccatctagccccctcaggtatttacacgaggggg--gcagatcttt 458
|||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 291 caacaaaaaatttcccatctagcctcctcaggtatttacacgagggggcagacgatctt- 233
Query: 459 ggctgagcctcttcaaataagagtcacaatctggatcagcagttcacaccacattgcccc 518
| |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 232 gattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgcccc 173
Query: 519 aaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagtaaggag 578
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 172 aaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggag 113
Query: 579 aagatagatgcaaggaggatggaccaaacgatgacgattgttggcgtgcggttctgcctg 638
||||| || || |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 112 aagatggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcctg 53
Query: 639 cccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgaga 690
|||||||||| ||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 52 cccatgagacacttcaggaaggggtacagatggaggatcacccagatcgaga 1
>gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 420
Score = 660 bits (333), Expect = 0.0
Identities = 394/413 (95%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 932 gagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaat 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaat 361
Query: 992 gccaacaccactccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaag 1051
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 360 gccaacaccactccatctgagttccaatataccagtggcaaaaatggaggcgaaaagaag 301
Query: 1052 aatgaagaacattccagcataattactaatctcaggaatgataaatttattggtaagaag 1111
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 300 aatgaagaacatcccagcatagttactaatctcaggaatgataaatttattggtaaggag 241
Query: 1112 acagatagcaggaagcacacaataggcgataagcggaacagatgtgattggataaacaat 1171
||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 240 acagatagcaggaagaacacaataggcaataagcggaatggatgtgattggataaacaat 181
Query: 1172 ggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccatat 1231
|||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||| ||
Sbjct: 180 ggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccagat 121
Query: 1232 aggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctgatt 1291
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagcacctgatt 61
Query: 1292 aagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtg 1344
|||||||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 60 aagacgatcagagagattgattggtgcagaaccctt-aaacaaggtcgtggtg 9
>gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 367
Score = 658 bits (332), Expect = 0.0
Identities = 353/360 (98%)
Strand = Plus / Minus
Query: 1652 ttccatgttaaagatgggagctgaagattctgttctcttcataatacggctttgactatc 1711
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttccatgttgaagatgggagctgaagattctgttctcttcataatacggctttgactatc 308
Query: 1712 catataactcttgttctttctcttccttctaccacagcagctcttaacaacaatgttagg 1771
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 catataacttttgttctttttcttccttctaccacagcagctcttaacaacaatgttagg 248
Query: 1772 ttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaaca 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaaca 188
Query: 1832 gcatcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatc 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gcatcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatc 128
Query: 1892 aaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttg 1951
|||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 127 aaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttg 68
Query: 1952 tggaaattgtacataacaagttttccttcctagagctggatccatcatgaagcacattgc 2011
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 67 tggaaattgtacataacaagttttccttcctagagccggatccatcatgaagcacattgc 8
>gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 351
Score = 640 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Minus
Query: 1762 caatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcc 1821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcc 292
Query: 1822 tattgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttca 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tattgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttca 232
Query: 1882 tgttgatatcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccat 1941
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 231 tgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccat 172
Query: 1942 caaatctttgtggaaattgtacataacaagttttccttcctagagctggatccatcatga 2001
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 171 cgaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatga 112
Query: 2002 agcacattgcttctctaagagctttgctgctattgaagtaatggtcacaatccacattga 2061
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 111 agcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattga 52
Query: 2062 gaagataggcaccatttgtcagcacagcagatacacgaatcag 2104
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 gaagataggcaccatttgtcagcacagcagatacacgaatcag 9
>gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 359
Score = 624 bits (315), Expect = e-176
Identities = 342/351 (97%)
Strand = Plus / Minus
Query: 1333 aaggtcgtggtggcatgcagtagattgattgccagcctcttgcatgcattttaaacccag 1392
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 359 aaggtcggggtggcatgcagtagattgattgccatcctcttgcatgcattttaaacccag 300
Query: 1393 tcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttt 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttt 240
Query: 1453 tgtcctcgtacccacagctgataacatggatagcttccttcagtagagaagctgggtttg 1512
||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 239 tgtcctcatacccacagctgattacatggatagcttcctttagtagagaagctgggtttg 180
Query: 1513 ttgaaggtggtatgccaccttgagtcataaaggtggatgcaatgaagattggagactgac 1572
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 179 ttgaaggtggtatgccactttgagtcataaaggtggatgcaatgaaaattggagactgac 120
Query: 1573 caaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacctt 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 caaagcgtttctccaatttcctctgggacataagcactgacctttcatcctcataacctt 60
Query: 1633 caataccctcctcgatgtcttccatgttaaagatgggagctgaagattctg 1683
|||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 59 caataccctcttcgatgtcttccatgttgaagatgggagctgaagattctg 9
>gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 3', mRNA sequence
Length = 774
Score = 620 bits (313), Expect = e-175
Identities = 331/337 (98%)
Strand = Plus / Minus
Query: 700 ttccaaagagcggaccccaggattggtagccgctgttaatggcatacgaaattcctgcca 759
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 337 ttccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaaattcctgcca 278
Query: 760 ccattccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtccact 819
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 277 ccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaactggtccact 218
Query: 820 tgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtga 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtga 158
Query: 880 agttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagagatggg 939
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 157 agttggtatcaatcccagccaacactttcagcagaccctggaacaccgtgaagagatggg 98
Query: 940 cagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacac 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacac 38
Query: 1000 cactccatctgagctccaatataccagtggcgaaaat 1036
||||||||||||| ||||||||||||||||| |||||
Sbjct: 37 cactccatctgagttccaatataccagtggcaaaaat 1
Score = 412 bits (208), Expect = e-112
Identities = 388/440 (88%), Gaps = 19/440 (4%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 771 tacaacagctgcctttttatatagttgtgctaagaaattacagtgttctgactgtttgct 712
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 711 cacaatacaaagaatgtatcagtc--tgcgtataaataacagcattgccatatagttcgt 654
Query: 197 gtgaatagttacctcaaacaa---ataatttactctaaaacaataaacaccacgtat-nn 252
||||| |||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 653 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 594
Query: 253 nnnnntgcagaattcacaatttacgctgctggccagcactacaagcaatgtag-aaaggc 311
|||| |||||||||||||||||||||||| | ||||| |||| |||| ||||||
Sbjct: 593 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaaggc 534
Query: 312 tccatgatttt--gt---ctgcagcagcaccggcaccggcaccgaagaagctaataaaca 366
||||||||||| || | |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 533 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaaca 474
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaa-ttcccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 473 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 414
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||
Sbjct: 413 cctcaggtatttacacgagggggcagacgatc-ttgattgagcctcttcaaataagagtc 355
Query: 484 acaatctggatcagcagttc 503
|| ||| ||||||||||||
Sbjct: 354 acggtctcgatcagcagttc 335
>gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_3_B12_A002 3', mRNA sequence
Length = 577
Score = 613 bits (309), Expect = e-173
Identities = 520/581 (89%), Gaps = 20/581 (3%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||||
Sbjct: 577 tacaacagctgcctttttatatagttgtgctaaga-attacagtgttctgactgtttgct 519
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 518 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 461
Query: 197 gtgaatagttacctcaaacaaat---aatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 460 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 401
Query: 254 nnnn-tgcagaattcacaatttacgctgctggccagcactacaagcaatgtagaaa-ggc 311
|||| |||||||||||||||||||||||| | ||||| ||| ||||||| |||
Sbjct: 400 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcagggtagaaaaggc 341
Query: 312 tccatgatttt--gtctgcagcagca---ccggcaccggcaccgaagaagctaataaaca 366
||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||
Sbjct: 340 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaaca 281
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaatt-cccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 280 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 221
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||
Sbjct: 220 cctcaggtatttacacgagggggcagacgatctt-gattgagcctcttcaaataagagtc 162
Query: 484 acaatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggg 543
|| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 161 acggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcgggg 102
Query: 544 agatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggacc 603
|||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||
Sbjct: 101 agatgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggacc 42
Query: 604 aaacgatgacgattgttggcgtgcggttctgcctgcccatg 644
| || |||||||||||||| |||||||||||||||||||||
Sbjct: 41 agacaatgacgattgttggtgtgcggttctgcctgcccatg 1
>gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 609 bits (307), Expect = e-172
Identities = 474/524 (90%), Gaps = 11/524 (2%)
Strand = Plus / Minus
Query: 228 ctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaatttacgctgctggcc 286
||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 523 ctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgctgctggcc 464
Query: 287 agcactacaagcaatgtagaaa-ggctccatgatttt--gtctgcagcagca---ccggc 340
| ||||| |||| ||||||| |||||||||||||| ||| ||||||||| ||| |
Sbjct: 463 ggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcagcaccgtc 404
Query: 341 accggcaccgaagaagctaataaacagaggcataacttggatgcagatccatcctcatct 400
||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 403 accggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatcctcatct 344
Query: 401 acaacaaaaaatt-cccatctagccccctcaggtatttacacgaggggg--gcagatctt 457
||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 343 acaacaaaaaatttcccatctagcctcctcaggtatttacacgagggggcagacgatctt 284
Query: 458 tggctgagcctcttcaaataagagtcacaatctggatcagcagttcacaccacattgccc 517
| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 283 -gattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgcattgccc 225
Query: 518 caaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagtaagga 577
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 224 caaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccacagcaagga 165
Query: 578 gaagatagatgcaaggaggatggaccaaacgatgacgattgttggcgtgcggttctgcct 637
|||||| || || |||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 164 gaagatggacgcgaggaggatggaccagacaatgacgattgttggtgtgcggttctgcct 105
Query: 638 gcccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacag 697
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 104 gcccatgagacccttcaggaaggggtacagatggaggatcacccagatcgagaagaacag 45
Query: 698 ctttccaaagagcggaccccaggattggtagccgctgttaatgg 741
|||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 44 ctttccaaagagcggaccccaggattggtaaccgctgttgatgg 1
>gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 647
Score = 585 bits (295), Expect = e-164
Identities = 343/359 (95%)
Strand = Plus / Plus
Query: 1076 actaatctcaggaatgataaatttattggtaagaagacagatagcaggaagcacacaata 1135
||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 136 actaacctcaggaatgataaatttattggtaaggagacagatagcaggaagaacacaata 195
Query: 1136 ggcgataagcggaacagatgtgattggataaacaatggtgttaatgtaagccagcctctc 1195
||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 196 ggcaataagcggaatggatgtgattggataaacaatggtgttgatgtaagccagcctctc 255
Query: 1196 caaaagcttcaatcgcccattgtagccataccatataggacaatgtctgctaagcagaat 1255
||||||||||| ||| |||||||| |||||||| ||||||||||||||||| |||| |||
Sbjct: 256 caaaagcttcagtcggccattgtaaccataccagataggacaatgtctgctgagcaaaat 315
Query: 1256 ttccactgacccaagagcccaacggagcacctgattaagacgatcagaaagattgatagg 1315
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 316 ttccactgacccaagagcccaacggagcacctgattaagacgatcagagagattgattgg 375
Query: 1316 tgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgc 1375
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 tgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgattgccatcctcttgc 435
Query: 1376 atgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatct 1434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatct 494
Score = 103 bits (52), Expect = 1e-019
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 1433 ctcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttcctt 1492
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 588 ctcttttccccattcagttttgtcctcatacccacagctgattacatggatagcttcctt 647
>gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_B11_A007 5', mRNA sequence
Length = 652
Score = 581 bits (293), Expect = e-163
Identities = 551/637 (86%)
Strand = Plus / Minus
Query: 1476 acatggatagcttccttcagtagagaagctgggtttgttgaaggtggtatgccaccttga 1535
||||| ||||||||||| || || |||||||||||||||||||| |||||||||||||||
Sbjct: 637 acatgtatagcttcctttagcagggaagctgggtttgttgaagggggtatgccaccttga 578
Query: 1536 gtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcctc 1595
|||||||||||||||||||| || ||||| ||||| ||||||||||||||||| || ||
Sbjct: 577 gtcataaaggtggatgcaataaaaattggggactggccaaagcgtttctccaagctcttc 518
Query: 1596 tgggacataagcactgacctttcatcctcataaccttcaataccctcctcgatgtcttcc 1655
|||||||| |||| ||||||||||||||| |||||||||| ||||| || || ||||||
Sbjct: 517 tgggacatgagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttcc 458
Query: 1656 atgttaaagatgggagctgaagattctgttctcttcataatacggctttgactatccata 1715
||||| ||||||||||| ||||||||||||||||||||| |||| ||| ||| |||
Sbjct: 457 atgttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaata 398
Query: 1716 taactcttgttctttctcttccttctaccacagcagctcttaacaacaatgttaggttcc 1775
|| ||||||| ||| || || || | |||||||| || |||| | |||| |||| |||
Sbjct: 397 tagctcttgtccttcctttttctgccgccacagcaacttttaatgataatgataggctcc 338
Query: 1776 agatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcat 1835
| ||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 337 aaatcagcttctgtcaatacaggatcataaccatacaaggcctgcctattgaaacagcat 278
Query: 1836 cctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaag 1895
|||||||||||||| || || || ||||||||||||| ||| ||||| || |||||||||
Sbjct: 277 cctgttcccacataaacaggtccttgaatgccatctaaacccttcatattaatatcaaag 218
Query: 1896 aagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgtgga 1955
||||| |||||||| || ||||| ||||| || |||| |||||||||||||||||||||
Sbjct: 217 aagacaatgttccggtttgcataacgatcatgtgagtctatgccatcaaatctttgtgga 158
Query: 1956 aattgtacataacaagttttccttcctagagctggatccatcatgaagcacattgcttct 2015
|| || || || ||||||||||||||||| |||||||||||||| || ||||| || |||
Sbjct: 157 aactgaacgtagcaagttttccttcctagtgctggatccatcataaaacacatagcctct 98
Query: 2016 ctaagagctttgctgctattgaagtaatggtcacaatccacattgagaagataggcacca 2075
||||||||||||||||| |||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 97 ctaagagctttgctgctgttgaagtagtgatcacaatccacattaagaagataagcacca 38
Query: 2076 tttgtcagcacagcagatacacgaatcagtgcattca 2112
|||||||| ||||| ||||| || |||| |||||||
Sbjct: 37 tttgtcaggacagctgatacgcgtatcaaagcattca 1
>gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 535 bits (270), Expect = e-149
Identities = 439/488 (89%), Gaps = 16/488 (3%)
Strand = Plus / Minus
Query: 97 atagttgtcctaagagattacagtgttctgactgtttgctcacaatccgaagaatgtatc 156
|||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 487 atagttgtgctaagaaattacagtgttctgactgtttgctcacaatacaaagaatgtatc 428
Query: 157 agtctttgcgtataaataacagcattgccatatagttcgtgtgaatagttacctcaaaca 216
||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 427 agtct--gcgtataaataacagcattgccatatagttcgtgtgaacagttccctcaaaca 370
Query: 217 aat---aatttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaat 272
||| ||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 369 aatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaat 310
Query: 273 ttacgctgctggccagcactacaagcaatgtag-aaaggctccatgatttt--gt---ct 326
|||||||||||||| | ||||| |||| |||| ||||||||||||||||| || |
Sbjct: 309 ttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgca 250
Query: 327 gcagcagcaccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcag 386
|||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 249 gcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaa 190
Query: 387 atccatcctcatctacaacaaaaaa-ttcccatctagccccctcaggtatttacacgagg 445
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 189 atccatcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagg 130
Query: 446 ggg--gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttc 503
||| | |||| ||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 129 gggcagacgatc-ttgattgagcctcttcaaataagagtcacggtctcgatcagcagttc 71
Query: 504 acaccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 11
Query: 564 acccacag 571
||||||||
Sbjct: 10 acccacag 3
>gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 504
Score = 523 bits (264), Expect = e-146
Identities = 437/486 (89%), Gaps = 17/486 (3%)
Strand = Plus / Minus
Query: 97 atagttgtcctaagagattacagtgttctgactgtttgctcacaatccgaagaatgtatc 156
|||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 482 atagttgtgctaaga-attacagtgttctgactgtttgctcacaatacaaagaatgtatc 424
Query: 157 agtctttgcgtataaataacagcattgccatatagttcgtgtgaatagttacctcaaaca 216
||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 423 agtct--gcgtataaataacagcattgccatatagttcgtgtgaacagttccctcaaaca 366
Query: 217 aat---aatttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaat 272
||| ||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 365 aatgataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaat 306
Query: 273 ttacgctgctggccagcactacaagcaatgtag-aaaggctccatgatttt--gt---ct 326
|||||||||||||| | ||||| |||| |||| ||||||||||||||||| || |
Sbjct: 305 ttacgctgctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgca 246
Query: 327 gcagcagcaccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcag 386
|||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 245 gcagcagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaa 186
Query: 387 atccatcctcatctacaacaaaaaa-ttcccatctagccccctcaggtatttacacgagg 445
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 185 atccatcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagg 126
Query: 446 ggg--gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttc 503
||| | |||| ||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 125 gggcagacgatc-ttgattgagcctcttcaaataagagtcacggtctcgatcagcagttc 67
Query: 504 acaccacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 acaccgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttc 7
Query: 564 acccac 569
||||||
Sbjct: 6 acccac 1
>gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 507 bits (256), Expect = e-141
Identities = 452/508 (88%), Gaps = 20/508 (3%)
Strand = Plus / Minus
Query: 80 tacaacagctgcctt---acatagttgtcctaagagattacagtgttctgactgtttgct 136
||||||||||||||| | |||||||| |||||| || |||||||||||||||||||||
Sbjct: 506 tacaacagctgcctttttatatagttgtgctaagaaat-acagtgttctgactgtttgct 448
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 447 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 390
Query: 197 gtgaatagttacctcaaacaaat---aatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 389 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 330
Query: 254 nnnn-tgcagaattcacaatttacgctgctggccagcactacaagcaatgtag-aaaggc 311
|||| |||||||||||||||||||||||| | ||||| |||| |||| ||||||
Sbjct: 329 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaaggc 270
Query: 312 tccatgatttt--gt---ctgcagcagcaccggcaccggcaccgaagaagctaataaaca 366
||||||||||| || | |||||||||||| |||||||||| |||||||||||||||
Sbjct: 269 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaacg 210
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaa-ttcccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 209 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 150
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||
Sbjct: 149 cctcaggtatttacacgagggggcagacgatc-ttgattgagcctcttcaaataagagtc 91
Query: 484 acaatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggg 543
|| ||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 90 acggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcaggg 31
Query: 544 agatgaaaggatcgatcttcacccacag 571
||||||||||||||||||||||||||||
Sbjct: 30 agatgaaaggatcgatcttcacccacag 3
>gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_E05_A002 3', mRNA sequence
Length = 477
Score = 504 bits (254), Expect = e-140
Identities = 429/480 (89%), Gaps = 16/480 (3%)
Strand = Plus / Minus
Query: 137 cacaatccgaagaatgtatcagtctttgcgtataaataacagcattgccatatagttcgt 196
|||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 477 cacaatacaaagaatgtatcagtct--gcgtataaataacagcattgccatatagttcgt 420
Query: 197 gtgaatagttacctcaaacaaat---aatttactctaaaacaataaacaccacgtatnnn 253
||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 419 gtgaacagttccctcaaacaaatgataatttactctaaaacaataaacaccacgtataaa 360
Query: 254 nnnn-tgcagaattcacaatttacgctgctggccagcactacaagcaatgtagaaa-ggc 311
|||| |||||||||||||||||||||||| | ||||| |||| ||||||| |||
Sbjct: 359 aaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggtagaaaaggc 300
Query: 312 tccatgatttt--gtctgcagcagca---ccggcaccggcaccgaagaagctaataaaca 366
||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||
Sbjct: 299 tccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagctaataaaca 240
Query: 367 gaggcataacttggatgcagatccatcctcatctacaacaaaaaatt-cccatctagccc 425
|||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 239 gaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttcccatctagcct 180
Query: 426 cctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaaataagagtc 483
||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||
Sbjct: 179 cctcaggtatttacacgagggggcagacgatctt-gattgagcctcttcaaataagagtc 121
Query: 484 acaatctggatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcgggg 543
|| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 120 acggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttctgtgtcgggg 61
Query: 544 agatgaaaggatcgatcttcacccacagtaaggagaagatagatgcaaggaggatggacc 603
|||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||
Sbjct: 60 agatgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggacc 1
>gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_10_F02_A002 5', mRNA sequence
Length = 490
Score = 502 bits (253), Expect = e-139
Identities = 423/474 (89%), Gaps = 11/474 (2%)
Strand = Plus / Plus
Query: 218 ataatttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaatttac 276
||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 18 ataatttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttac 77
Query: 277 gctgctggccagcactacaagcaatgtagaaa-ggctccatgatttt--gtctgcagcag 333
|||||||||| | ||||| |||| ||| ||| |||||||||||||| ||| |||||||
Sbjct: 78 gctgctggccggtgctacaggcaaggtaaaaaaggctccatgatttttagtccgcagcag 137
Query: 334 ca---ccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcagatcc 390
|| ||| |||||||||| |||||||||||||||||||||||||||| |||||| ||||
Sbjct: 138 cagcaccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatcc 197
Query: 391 atcctcatctacaacaaaaaatt-cccatctagccccctcaggtatttacacgaggggg- 448
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 198 atcctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagggggc 257
Query: 449 -gcagatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttcacac 507
| |||||| | |||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 258 agacgatctt-gattgagcctcttcaaataagagtcacggtctcgatcagcagttcacac 316
Query: 508 cacattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcaccc 567
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cgcattgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcaccc 376
Query: 568 acagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggcgtgc 627
|||| ||||| ||||| || || |||||||||||||| || |||||||||||||| ||||
Sbjct: 377 acagcaaggaaaagatggacgcgaggaggatggaccacacaatgacgattgttggtgtgc 436
Query: 628 ggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccc 681
|||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||
Sbjct: 437 ggttctgcctgcccatgaaacccttcaggaaggggtacagatggaggatcaccc 490
>gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105330, DNA
sequence
Length = 705
Score = 486 bits (245), Expect = e-135
Identities = 257/261 (98%)
Strand = Plus / Minus
Query: 1628 accttcaataccctcctcgatgtcttccatgttaaagatgggagctgaagattctgttct 1687
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 422 accttcaataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttct 363
Query: 1688 cttcataatacggctttgactatccatataactcttgttctttctcttccttctaccaca 1747
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 362 cttcataatacggctttgactatccatataacttttgttctttttcttccttctaccaca 303
Query: 1748 gcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatcc 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatcc 243
Query: 1808 atacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgcc 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgcc 183
Query: 1868 atctagacctttcatgttgat 1888
|||||||||||||||||||||
Sbjct: 182 atctagacctttcatgttgat 162
Score = 186 bits (94), Expect = 1e-044
Identities = 97/98 (98%)
Strand = Plus / Minus
Query: 1534 gagtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcc 1593
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 705 gagtcataaaggtggatgcaatgaaaattggagactgaccaaagcgtttctccaatttcc 646
Query: 1594 tctgggacataagcactgacctttcatcctcataacct 1631
||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tctgggacataagcactgacctttcatcctcataacct 608
Score = 139 bits (70), Expect = 2e-030
Identities = 79/82 (96%)
Strand = Plus / Minus
Query: 1889 atcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatct 1948
||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 82 atcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatct 23
Query: 1949 ttgtggaaattgtacataacaa 1970
||||||||||||||||||||||
Sbjct: 22 ttgtggaaattgtacataacaa 1
>gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 651
Score = 482 bits (243), Expect = e-133
Identities = 273/283 (96%)
Strand = Plus / Minus
Query: 1152 gatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttcaatcgc 1211
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 650 gatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcgg 591
Query: 1212 ccattgtagccataccatataggacaatgtctgctaagcagaatttccactgacccaaga 1271
|||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 590 ccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgacccaaga 531
Query: 1272 gcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaacccttgaaa 1331
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 530 gcccaacggagcacctgattaagacgatcagagagattgattggtgcagaacccttgaaa 471
Query: 1332 caaggtcgtggtggcatgcagtagattgattgccagcctcttgcatgcattttaaaccca 1391
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 caaggtcgtggtggcatgcagtagattgattgccatcctcttgcatgcattttaaaccca 411
Query: 1392 gtcagaatatcctctgtaactgaaccatagatccagccaatct 1434
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtcagaatatcctctgtaactgaaccatagatccagccaatct 368
Score = 363 bits (183), Expect = 8e-098
Identities = 195/199 (97%)
Strand = Plus / Minus
Query: 1433 ctcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttcctt 1492
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 274 ctcttttccccattcagttttgtcctcatacccacagctgattacatggatagcttcctt 215
Query: 1493 cagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaaggtggatgc 1552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tagtagagaagctgggtttgttgaaggtggtatgccaccttgagtcataaaggtggatgc 155
Query: 1553 aatgaagattggagactgaccaaagcgtttctccaatttcctctgggacataagcactga 1612
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aatgaaaattggagactgaccaaagcgtttctccaatttcctctgggacataagcactga 95
Query: 1613 cctttcatcctcataacct 1631
|||||||||||||||||||
Sbjct: 94 cctttcatcctcataacct 76
>gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 469
Score = 474 bits (239), Expect = e-131
Identities = 419/469 (89%), Gaps = 18/469 (3%)
Strand = Plus / Minus
Query: 130 gtttgctcacaatccga-agaat-gtatcagtctttgcgtataaataacagcattgccat 187
||||||||||||| | | ||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 467 gtttgctcacaatacaagagaatggtatcagtc--tgcgtataaataacagcattgccat 410
Query: 188 atagttcgtgtgaatagttacctcaaacaa---ataatttactctaaaacaataaacacc 244
|||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 409 atagttcgtgtgaacagttccctcaaacaaatgataatttactctaaaacaataaacacc 350
Query: 245 acgtat-nnnnnnntgcagaattcacaatttacgctgctggccagcactacaagcaatgt 303
|||||| |||| |||||||||||||||||||||||| | ||||| |||| ||
Sbjct: 349 acgtataaaaaaaatgcaaaattcacaatttacgctgctggccggtgctacaggcaaggt 290
Query: 304 ag-aaaggctccatgatttt--gt---ctgcagcagcaccggcaccggcaccgaagaagc 357
|| ||||||||||||||||| || | |||||||||||| |||||||||| |||||||
Sbjct: 289 agaaaaggctccatgatttttagtccgcagcagcagcaccgtcaccggcaccaaagaagc 230
Query: 358 taataaacagaggcataacttggatgcagatccatcctcatctacaacaaaaaa-ttccc 416
||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||
Sbjct: 229 taataaacagaggcataacttagatgcaaatccatcctcatctacaacaaaaaatttccc 170
Query: 417 atctagccccctcaggtatttacacgaggggg--gcagatctttggctgagcctcttcaa 474
|||||||| ||||||||||||||||||||||| | |||| ||| |||||||||||||
Sbjct: 169 atctagcctcctcaggtatttacacgagggggcagacgatc-ttgattgagcctcttcaa 111
Query: 475 ataagagtcacaatctggatcagcagttcacaccacattgccccaaggcggcagctttct 534
||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 110 ataagagtcacggtctcgatcagcagttcacaccgcattgccccaaggcggcagctttct 51
Query: 535 gtgtcggggagatgaaaggatcgatcttcacccacagtaaggagaagat 583
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 50 gtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagat 2
>gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 428
Score = 464 bits (234), Expect = e-128
Identities = 385/429 (89%), Gaps = 14/429 (3%)
Strand = Plus / Minus
Query: 164 gcgtataaataacagcattgccatatagttcgtgtgaatagttacctcaaacaaat---a 220
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
Sbjct: 428 gcgtataaataacagcattgccatatagttcgtgtgaacagttccctcaaacaaatgata 369
Query: 221 atttactctaaaacaataaacaccacgtatnnnnnnn-tgcagaattcacaatttacgct 279
|||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 368 atttactctaaaacaataaacaccacgtataaaaaaaatgcaaaattcacaatttacgct 309
Query: 280 gctggccagcactacaagcaatgtag-aaaggctccatgatttt--gt---ctgcagcag 333
||||||| | ||||| |||| |||| ||||||||||||||||| || | |||||||
Sbjct: 308 gctggccggtgctacaggcaaggtagaaaaggctccatgatttttagtccgcagcagcag 249
Query: 334 caccggcaccggcaccgaagaagctaataaacagaggcataacttggatgcagatccatc 393
||||| |||||||||| |||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 248 caccgtcaccggcaccaaagaagctaataaacagaggcataacttagatgcaaatccatc 189
Query: 394 ctcatctacaacaaaaaa-ttcccatctagccccctcaggtatttacacgaggggg--gc 450
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct: 188 ctcatctacaacaaaaaatttcccatctagcctcctcaggtatttacacgagggggcaga 129
Query: 451 agatctttggctgagcctcttcaaataagagtcacaatctggatcagcagttcacaccac 510
|||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||| |
Sbjct: 128 cgatc-ttgattgagcctcttcaaataagagtcacggtctcgatcagcagttcacaccgc 70
Query: 511 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 attgccccaaggcggcagctttctgtgtcggggagatgaaaggatcgatcttcacccaca 10
Query: 571 gtaaggaga 579
| |||||||
Sbjct: 9 gcaaggaga 1
>gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 473
Score = 460 bits (232), Expect = e-127
Identities = 265/276 (96%)
Strand = Plus / Minus
Query: 3447 ttgtatctagtcttgcactgagggcagcattggttcccttccttgcgctcgtactcatag 3506
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 473 ttgtatctagtcttgcactgagggcagcattggttcccctccttgcgctcgtactcgtag 414
Query: 3507 caagggcggcagacagggaaggcacactcattgcaggcaacaaagacatcaccagtggct 3566
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 caagggcggcagacagggaaggcgcactcattgcaggcaacaaagacatcaccagtggct 354
Query: 3567 gaaacgccaacagtgtcgccacaaatctggcagacctgcccattcgcactcttcgtgggc 3626
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||
Sbjct: 353 gaaacgccaacagtgtcgccacaaatctggcagacctgcccactcgcgctcttcgcgggc 294
Query: 3627 ttagccgggacaggcgcgtcgccgtcgtggcggatcatgacgaactcgttgcggttgtga 3686
||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 293 ttagccggggcgggcgcgtcgccgtcgtgtcggatcatgacgaactcgttgcggttgtgc 234
Query: 3687 gagcctgccaccatccccttgttggccgccatctcc 3722
||||| ||||||||||||||||||||||||||||||
Sbjct: 233 gagcccgccaccatccccttgttggccgccatctcc 198
Score = 101 bits (51), Expect = 5e-019
Identities = 107/126 (84%), Gaps = 6/126 (4%)
Strand = Plus / Minus
Query: 3771 ccggcggagggcaatcagcccgtgcggccctctagatccgagcggcagcggcagcgaccg 3830
||||||||| | ||| |||||||||| |||||||||||||||||| ||| |||
Sbjct: 131 ccggcggagaccgatcggcccgtgcgggcctctagatccgagcggcggcg------acca 78
Query: 3831 ccaccatgccccagatccctcccgcttgctcgctgcaatgccgcgcagtggtggtgctgc 3890
|||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||
Sbjct: 77 ccaccatgccccggatccctccctctccctcgctgcaatgccgcgcagtggtggtggcgc 18
Query: 3891 tgctgc 3896
||||||
Sbjct: 17 tgctgc 12
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,068,535
Number of Sequences: 832831
Number of extensions: 1068535
Number of successful extensions: 314937
Number of sequences better than 0.5: 291
Number of HSP's better than 0.5 without gapping: 290
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 314006
Number of HSP's gapped (non-prelim): 764
length of query: 3896
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3875
effective length of database: 473,870,218
effective search space: 1836247094750
effective search space used: 1836247094750
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)