BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.4
(582 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 436 e-120
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 428 e-118
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 428 e-118
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 420 e-116
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 420 e-116
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 420 e-116
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 420 e-116
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 420 e-116
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 420 e-116
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 420 e-116
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 420 e-116
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 420 e-116
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 420 e-116
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 420 e-116
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 420 e-116
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 420 e-116
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 420 e-116
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 420 e-116
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 420 e-116
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 412 e-113
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 412 e-113
gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2... 410 e-113
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 410 e-113
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 406 e-112
gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) So... 406 e-112
gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle... 398 e-109
gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/c... 392 e-107
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 371 e-101
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 365 3e-099
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 361 5e-098
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 349 2e-094
gb|CX620331.1|CX620331 GABR1_51_E02.b1_A002 GA- or brassino... 343 1e-092
gb|BG560741.1|BG560741 RHIZ2_64_B11.g1_A003 Rhizome2 (RHIZ2... 333 1e-089
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 325 3e-087
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 317 6e-085
gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1... 293 9e-078
gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2... 293 9e-078
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 276 2e-072
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 276 2e-072
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 276 2e-072
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 276 2e-072
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 276 2e-072
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 276 2e-072
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 276 2e-072
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 276 2e-072
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 276 2e-072
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 276 2e-072
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 276 2e-072
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 276 2e-072
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 276 2e-072
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 268 5e-070
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 262 3e-068
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 260 1e-067
gb|BI245792.1|BI245792 IP1_64_D12.g1_A002 Immature pannicle... 256 2e-066
gb|BG412378.1|BG412378 OV2_33_C02.g1_A002 Ovary 2 (OV2) Sor... 254 8e-066
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 248 5e-064
gb|CD432148.1|CD432148 ETH1_26_B01.b1_A002 Ethylene-treated... 244 8e-063
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 240 1e-061
gb|CW060787.1|CW060787 104_304_10520046_115_30144 Sorghum m... 236 2e-060
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 230 1e-058
gb|CN124005.1|CN124005 RHOH1_2_B05.b1_A002 Acid- and alkali... 228 5e-058
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 228 5e-058
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 220 1e-055
gb|CF429640.1|CF429640 PH1_23_B11.b1_A002 Phosphorous-defic... 220 1e-055
gb|CL191208.1|CL191208 104_410_10906632_114_32533_096 Sorgh... 204 7e-051
gb|CW229188.1|CW229188 104_670_11207171_116_37259_042 Sorgh... 204 7e-051
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 188 4e-046
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 182 2e-044
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 180 9e-044
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 180 9e-044
gb|CW387886.1|CW387886 fsbb001f072g19k0 Sorghum methylation... 178 4e-043
gb|CF429485.1|CF429485 PH1_22_A01.b1_A002 Phosphorous-defic... 168 4e-040
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 165 6e-039
gb|CW229189.1|CW229189 104_670_11207171_148_37260_042 Sorgh... 163 2e-038
gb|AI724776.1|AI724776 RHIZ1_9_A10.y2_A001 Rhizome1 (RHIZ1)... 159 3e-037
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 155 5e-036
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 151 8e-035
gb|CW321279.1|CW321279 104_814_11475462_148_35937_021 Sorgh... 149 3e-034
gb|CD235977.1|CD235977 SS1_25_E11.b1_A012 Salt-stressed see... 147 1e-033
gb|CF427571.1|CF427571 PH1_16_B04.b1_A002 Phosphorous-defic... 133 2e-029
gb|BF421073.1|BF421073 FM1_6_A06.g1_A003 Floral-Induced Mer... 119 3e-025
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 117 1e-024
gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2... 117 1e-024
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 103 2e-020
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 103 2e-020
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 103 2e-020
gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation... 103 2e-020
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 103 2e-020
gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1... 103 2e-020
gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/c... 103 2e-020
gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/c... 103 2e-020
gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves... 103 2e-020
gb|CN127764.1|CN127764 RHOH1_25_A01.b1_A002 Acid- and alkal... 100 3e-019
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 96 4e-018
gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/ce... 96 4e-018
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 96 4e-018
gb|CN141913.1|CN141913 WOUND1_2_E01.g1_A002 Wounded leaves ... 94 2e-017
gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (L... 90 3e-016
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 90 3e-016
gb|BE361499.1|BE361499 DG1_81_B09.b1_A002 Dark Grown 1 (DG1... 90 3e-016
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 88 1e-015
gb|CW229431.1|CW229431 104_670_11207297_116_37255_067 Sorgh... 88 1e-015
gb|CW247382.1|CW247382 104_708_11221754_148_36079_009 Sorgh... 88 1e-015
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 88 1e-015
gb|BF480853.1|BF480853 FM1_14_B05.g1_A003 Floral-Induced Me... 88 1e-015
gb|CL150805.1|CL150805 104_332_10778792_116_31358_344 Sorgh... 80 3e-013
gb|BI141474.1|BI141474 IP1_56_E10.g1_A002 Immature pannicle... 80 3e-013
gb|CD428052.1|CD428052 ETH1_32_E01.b1_A002 Ethylene-treated... 80 3e-013
gb|CN141836.1|CN141836 WOUND1_2_E01.b1_A002 Wounded leaves ... 80 3e-013
gb|AW285714.1|AW285714 LG1_320_F04.g1_A002 Light Grown 1 (L... 78 1e-012
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 76 4e-012
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 76 4e-012
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 76 4e-012
gb|BG411924.1|BG411924 OV2_39_G10.g1_A002 Ovary 2 (OV2) Sor... 76 4e-012
gb|CL177775.1|CL177775 104_385_10894067_148_31913_131 Sorgh... 68 1e-009
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 68 1e-009
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 68 1e-009
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 68 1e-009
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 68 1e-009
gb|CW303659.1|CW303659 104_788_11465359_148_35697_028 Sorgh... 68 1e-009
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 68 1e-009
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 68 1e-009
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 68 1e-009
gb|AW284995.1|AW284995 LG1_297_A04.g1_A002 Light Grown 1 (L... 68 1e-009
gb|AW677581.1|AW677581 DG1_8_G07.g1_A002 Dark Grown 1 (DG1)... 68 1e-009
gb|BE361723.1|BE361723 DG1_81_B09.g1_A002 Dark Grown 1 (DG1... 68 1e-009
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 68 1e-009
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 68 1e-009
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 68 1e-009
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 68 1e-009
gb|BG559187.1|BG559187 RHIZ2_55_F12.g1_A003 Rhizome2 (RHIZ2... 68 1e-009
gb|BG560732.1|BG560732 RHIZ2_64_A10.g1_A003 Rhizome2 (RHIZ2... 68 1e-009
gb|BI139612.1|BI139612 IP1_46_G07.g1_A002 Immature pannicle... 68 1e-009
gb|BI351103.1|BI351103 IP1_69_H10.g1_A002 Immature pannicle... 68 1e-009
gb|CD220740.1|CD220740 CCC1_69_G07.b1_A007 Callus culture/c... 68 1e-009
gb|CD220860.1|CD220860 CCC1_72_B03.b1_A007 Callus culture/c... 68 1e-009
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 68 1e-009
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 68 1e-009
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 68 1e-009
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 68 1e-009
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 68 1e-009
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 68 1e-009
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 68 1e-009
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 68 1e-009
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 68 1e-009
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 68 1e-009
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 68 1e-009
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 68 1e-009
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 68 1e-009
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 68 1e-009
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 68 1e-009
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 68 1e-009
gb|CW064934.1|CW064934 104_311_10522851_114_30122 Sorghum m... 66 4e-009
gb|CW186183.1|CW186183 104_604_11166433_148_36706_013 Sorgh... 66 4e-009
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 66 4e-009
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 66 4e-009
gb|BQ656036.1|BQ656036 pRC0324 Sorghum halepense rhizome cD... 66 4e-009
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 66 4e-009
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 66 4e-009
gb|CW089886.1|CW089886 104_435_10948967_116_32598_088 Sorgh... 64 2e-008
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 64 2e-008
gb|CW369177.1|CW369177 fsbb001f043h16f0 Sorghum methylation... 64 2e-008
gb|CW394064.1|CW394064 fsbb001f081h04k0 Sorghum methylation... 64 2e-008
gb|CW423364.1|CW423364 fsbb001f133c09k0 Sorghum methylation... 64 2e-008
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 64 2e-008
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 64 2e-008
gb|BE359360.1|BE359360 DG1_40_D05.g1_A002 Dark Grown 1 (DG1... 64 2e-008
gb|BG412488.1|BG412488 OV2_34_H11.g1_A002 Ovary 2 (OV2) Sor... 64 2e-008
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 64 2e-008
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 64 2e-008
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 64 2e-008
gb|CD430144.1|CD430144 ETH1_17_H06.b1_A002 Ethylene-treated... 64 2e-008
gb|CD432263.1|CD432263 ETH1_29_E02.b1_A002 Ethylene-treated... 64 2e-008
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 64 2e-008
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 64 2e-008
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 64 2e-008
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 64 2e-008
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 64 2e-008
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 64 2e-008
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 64 2e-008
gb|CX616493.1|CX616493 GABR1_28_F03.b1_A002 GA- or brassino... 64 2e-008
gb|CN150126.1|CN150126 WOUND1_67_D03.b1_A002 Wounded leaves... 62 6e-008
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 60 2e-007
gb|BG049195.1|BG049195 OV1_24_G03.g1_A002 Ovary 1 (OV1) Sor... 60 2e-007
gb|CD229161.1|CD229161 CCC1_13_B09.b1_A007 Callus culture/c... 60 2e-007
gb|CL177774.1|CL177774 104_385_10894067_116_31914_131 Sorgh... 56 4e-006
gb|CW280308.1|CW280308 104_755_11407550_148_35446_055 Sorgh... 56 4e-006
gb|CW333674.1|CW333674 104_831_11482081_116_36043_001 Sorgh... 56 4e-006
gb|CW333675.1|CW333675 104_831_11482081_148_36044_001 Sorgh... 56 4e-006
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 56 4e-006
gb|CD463948.1|CD463948 ETH1_47_B11.g1_A002 Ethylene-treated... 56 4e-006
gb|CN134318.1|CN134318 OX1_25_D04.g1_A002 Oxidatively-stres... 56 4e-006
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 56 4e-006
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 56 4e-006
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 56 4e-006
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 54 1e-005
gb|CD431281.1|CD431281 ETH1_7_B06.g1_A002 Ethylene-treated ... 54 1e-005
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 54 1e-005
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 52 6e-005
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 52 6e-005
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 52 6e-005
gb|CW255393.1|CW255393 104_720_11226211_148_35134_080 Sorgh... 52 6e-005
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 52 6e-005
gb|BE357900.1|BE357900 DG1_23_H03.b1_A002 Dark Grown 1 (DG1... 52 6e-005
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 52 6e-005
gb|BG050942.1|BG050942 FM1_54_C04.b1_A003 Floral-Induced Me... 52 6e-005
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 52 6e-005
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 52 6e-005
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 52 6e-005
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 52 6e-005
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 52 6e-005
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 52 6e-005
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 52 6e-005
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 52 6e-005
gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorgh... 50 2e-004
gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation... 50 2e-004
gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation... 50 2e-004
gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seed... 50 2e-004
gb|CD221661.1|CD221661 CCC1_70_E11.b1_A007 Callus culture/c... 50 2e-004
gb|CN131435.1|CN131435 RHOH1_48_C07.b1_A002 Acid- and alkal... 48 0.001
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 48 0.001
gb|CN134481.1|CN134481 OX1_26_D04.g1_A002 Oxidatively-stres... 48 0.001
gb|CN134664.1|CN134664 OX1_27_E09.g1_A002 Oxidatively-stres... 48 0.001
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 48 0.001
gb|CW061064.1|CW061064 104_304_10520199_114_30143 Sorghum m... 46 0.004
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 46 0.004
gb|CD229498.1|CD229498 CCC1_16_D06.g1_A007 Callus culture/c... 46 0.004
gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation... 44 0.014
gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1... 44 0.014
gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1... 44 0.014
gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-defici... 44 0.014
gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkali... 44 0.014
gb|CN126050.1|CN126050 RHOH1_14_H04.g1_A002 Acid- and alkal... 44 0.014
gb|CX607460.1|CX607460 ANR1_8_G05.g1_A002 Anaerobic roots S... 44 0.014
gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassino... 44 0.014
gb|CL159497.1|CL159497 104_349_10804291_114_31381_115 Sorgh... 42 0.056
gb|CW137101.1|CW137101 104_523_11119113_148_34864_041 Sorgh... 42 0.056
gb|CW223946.1|CW223946 104_660_11203186_116_37447_047 Sorgh... 42 0.056
gb|CW228007.1|CW228007 104_667_11206124_116_37246_070 Sorgh... 42 0.056
gb|CW228008.1|CW228008 104_667_11206124_148_37245_070 Sorgh... 42 0.056
gb|CW333020.1|CW333020 104_830_11481720_148_36038_082 Sorgh... 42 0.056
gb|CW784462.1|CW784462 SP__Bb0024I23.r SP__Bb Sorghum propi... 42 0.056
gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/c... 42 0.056
gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed see... 42 0.056
gb|CF480054.1|CF480054 POL1_63_A12.g1_A002 Pollen Sorghum b... 42 0.056
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF480333.1|CF480333 POL1_65_D03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF480637.1|CF480637 POL1_67_A06.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF480649.1|CF480649 POL1_67_C02.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF480745.1|CF480745 POL1_67_D07.g1_A002 Pollen Sorghum b... 42 0.056
gb|CF480969.1|CF480969 POL1_69_E05.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF480980.1|CF480980 POL1_69_F07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF481103.1|CF481103 POL1_70_B02.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF481147.1|CF481147 POL1_70_F07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF481333.1|CF481333 POL1_71_H03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF481889.1|CF481889 POL1_75_A04.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF482067.1|CF482067 POL1_76_H03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF482434.1|CF482434 POL1_7_A01.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF482607.1|CF482607 POL1_8_B05.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF482799.1|CF482799 POL1_9_F05.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483137.1|CF483137 POL1_12_B09.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483265.1|CF483265 POL1_21_B07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483416.1|CF483416 POL1_22_D07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF483974.1|CF483974 POL1_2_G02.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF483976.1|CF483976 POL1_2_G04.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF483980.1|CF483980 POL1_2_G08.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF484108.1|CF484108 POL1_3_E05.b1_A002 Pollen Sorghum bi... 42 0.056
gb|CF484397.1|CF484397 POL1_25_C05.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF485051.1|CF485051 POL1_29_D08.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF485186.1|CF485186 POL1_30_A03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF485259.1|CF485259 POL1_30_A04.g1_A002 Pollen Sorghum b... 42 0.056
gb|CF486352.1|CF486352 POL1_37_E10.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF486491.1|CF486491 POL1_38_B03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF486657.1|CF486657 POL1_39_A11.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF486664.1|CF486664 POL1_39_B06.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF486682.1|CF486682 POL1_39_D02.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF487538.1|CF487538 POL1_44_H12.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 42 0.056
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF487815.1|CF487815 POL1_46_C05.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF487995.1|CF487995 POL1_47_D10.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488022.1|CF488022 POL1_47_G06.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488299.1|CF488299 POL1_49_A10.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488330.1|CF488330 POL1_49_E12.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488469.1|CF488469 POL1_50_E04.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488600.1|CF488600 POL1_51_B05.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488631.1|CF488631 POL1_51_E07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF488821.1|CF488821 POL1_52_A06.g1_A002 Pollen Sorghum b... 42 0.056
gb|CF489097.1|CF489097 POL1_54_H09.b1_A002 Pollen Sorghum b... 42 0.056
gb|CF489352.1|CF489352 POL1_57_C07.b1_A002 Pollen Sorghum b... 42 0.056
gb|CL183633.1|CL183633 104_396_10898297_114_31923_137 Sorgh... 40 0.22
gb|CL190441.1|CL190441 104_408_10906082_116_32502_005 Sorgh... 40 0.22
gb|CW034730.1|CW034730 104_265_10502732_114_30378 Sorghum m... 40 0.22
gb|CW040982.1|CW040982 104_274_10506361_114_30469 Sorghum m... 40 0.22
gb|CW047422.1|CW047422 104_285_10512719_114_30216 Sorghum m... 40 0.22
gb|CW047423.1|CW047423 104_285_10512719_114_30218 Sorghum m... 40 0.22
gb|CW115132.1|CW115132 104_490_11106383_148_34588_094 Sorgh... 40 0.22
gb|CW207898.1|CW207898 104_637_11188394_148_37047_011 Sorgh... 40 0.22
gb|CW225808.1|CW225808 104_663_11204555_116_37207_038 Sorgh... 40 0.22
gb|CW259822.1|CW259822 104_726_11228638_116_35193_091 Sorgh... 40 0.22
gb|CW349636.1|CW349636 fsbb001f010j05f0 Sorghum methylation... 40 0.22
gb|CW369991.1|CW369991 fsbb001f044k24f0 Sorghum methylation... 40 0.22
gb|CW387000.1|CW387000 fsbb001f071c15k0 Sorghum methylation... 40 0.22
gb|CW395356.1|CW395356 fsbb001f083f17k0 Sorghum methylation... 40 0.22
gb|CW492681.1|CW492681 fsbb001f283b08f0 Sorghum methylation... 40 0.22
gb|CL704377.2|CL704377 SP__Bb0014P11.r SP__Bb Sorghum propi... 40 0.22
gb|BM318579.1|BM318579 PI1_15_C01.b9_A002 Pathogen induced ... 40 0.22
gb|CD223869.1|CD223869 CCC1_30_D11.g1_A007 Callus culture/c... 40 0.22
gb|CD226681.1|CD226681 CCC1_47_B03.b1_A007 Callus culture/c... 40 0.22
gb|CD428756.1|CD428756 ETH1_36_H11.b1_A002 Ethylene-treated... 40 0.22
gb|CD430094.1|CD430094 ETH1_13_H07.g1_A002 Ethylene-treated... 40 0.22
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 436 bits (220), Expect = e-120
Identities = 265/280 (94%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 517 gctagtactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 458
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 457 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 398
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 397 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 338
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaact 278
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 277 cgacgagcaccgcgaagtagacggggttggagccctcctc 238
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 750 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 692
>gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 599
Score = 428 bits (216), Expect = e-118
Identities = 264/280 (94%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 375 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 316
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 315 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 256
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 255 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 196
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 195 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaact 136
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 135 cgacgagcaccgcgaagtagacggggttggagccctcctc 96
Score = 60.0 bits (30), Expect = 2e-007
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 69 atgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
|||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 599 atgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 555
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 428 bits (216), Expect = e-118
Identities = 264/280 (94%)
Strand = Plus / Plus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 301 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 360
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 361 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 420
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 421 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 480
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaact 540
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 541 cgacgagcaccgcgaagtagacggggttggagccctcctc 580
Score = 77.8 bits (39), Expect = 1e-012
Identities = 82/95 (86%), Gaps = 6/95 (6%)
Strand = Plus / Plus
Query: 20 attaataatttataatttcaatcgccctggtacattacatgcatggacaatgggcgggaa 79
|||||||||||||||| | |||||| ||||||||| ||| |||||||||||||||
Sbjct: 33 attaataatttataatcttaatcgcactggtacatc-----cattgacaatgggcgggaa 87
Query: 80 agcatctgcaaattaacttggccttcctccatttc 114
||||| ||||||||||||| | |||||||||||||
Sbjct: 88 agcatttgcaaattaactttg-cttcctccatttc 121
>gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505645, DNA
sequence
Length = 750
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Plus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 378 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 437
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 438 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 497
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 498 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 557
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 558 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 617
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 618 cgacgagcaccgcgaagtagacggggttggagccctcctc 657
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 141 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 199
>gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155714, DNA
sequence
Length = 689
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Plus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 30 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 89
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 90 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 149
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 150 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 209
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 210 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 269
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 270 cgacgagcaccgcgaagtagacggggttggagccctcctc 309
>gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159198, DNA
sequence
Length = 665
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 522 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 463
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 462 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 403
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 402 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 343
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 342 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 283
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 282 cgacgagcaccgcgaagtagacggggttggagccctcctc 243
>gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226991, DNA
sequence
Length = 651
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Plus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 321 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 380
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 381 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 440
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 441 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 500
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 501 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 560
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 561 cgacgagcaccgcgaagtagacggggttggagccctcctc 600
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 84 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 142
>gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475462, DNA
sequence
Length = 678
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 344 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 285
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 284 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 225
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 224 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 165
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 164 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 105
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 104 cgacgagcaccgcgaagtagacggggttggagccctcctc 65
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 581 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 523
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 401 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 342
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 341 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 282
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 281 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 222
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 221 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 162
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 161 cgacgagcaccgcgaagtagacggggttggagccctcctc 122
Score = 63.9 bits (32), Expect = 2e-008
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 637 tacatgcattgaca-tgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 580
>gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 363 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 304
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 303 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 244
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 243 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 184
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 183 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 124
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 123 cgacgagcaccgcgaagtagacggggttggagccctcctc 84
Score = 63.9 bits (32), Expect = 2e-008
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 599 tacatgcattgaca-tgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 542
>gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 638
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 375 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 316
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 315 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 256
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 255 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 196
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 195 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 136
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 135 cgacgagcaccgcgaagtagacggggttggagccctcctc 96
Score = 63.9 bits (32), Expect = 2e-008
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 611 tacatgcattgaca-tgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 554
>gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 585
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 387 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 328
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 327 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 268
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 267 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 208
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 207 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 148
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 147 cgacgagcaccgcgaagtagacggggttggagccctcctc 108
>gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 401 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 342
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 341 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 282
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 281 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 222
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 221 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 162
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 161 cgacgagcaccgcgaagtagacggggttggagccctcctc 122
>gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 335 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 276
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 275 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 216
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 215 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 156
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 155 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 96
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 95 cgacgagcaccgcgaagtagacggggttggagccctcctc 56
Score = 63.9 bits (32), Expect = 2e-008
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 571 tacatgcattgaca-tgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 514
>gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_30_D11_A007 3', mRNA sequence
Length = 615
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 337 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 278
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 277 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 218
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 217 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 158
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 157 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 98
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 97 cgacgagcaccgcgaagtagacggggttggagccctcctc 58
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 574 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 516
>gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_H01_A007 3', mRNA sequence
Length = 616
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 339 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 280
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 279 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 220
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 219 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 160
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 159 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 100
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 99 cgacgagcaccgcgaagtagacggggttggagccctcctc 60
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 576 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 518
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 558 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 499
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 498 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 439
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 438 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 379
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 378 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 319
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 318 cgacgagcaccgcgaagtagacggggttggagccctcctc 279
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 795 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 737
>gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 3', mRNA sequence
Length = 588
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 309 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 250
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 249 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 190
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 189 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 130
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 129 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 70
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 69 cgacgagcaccgcgaagtagacggggttggagccctcctc 30
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 546 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 488
>gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 3', mRNA sequence
Length = 617
Score = 420 bits (212), Expect = e-116
Identities = 263/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 339 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 280
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 279 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 220
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 219 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 160
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 159 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 100
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 99 cgacgagcaccgcgaagtagacggggttggagccctcctc 60
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 576 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 518
>gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_G11_A002 3', mRNA sequence
Length = 781
Score = 412 bits (208), Expect = e-113
Identities = 262/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |
Sbjct: 503 gctaatactggacgatggaacggtagtaggggttgggcacccagttggccgggatgactt 444
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 443 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 384
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 383 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 324
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 323 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 264
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 263 cgacgagcaccgcgaagtagacggggttggagccctcctc 224
Score = 61.9 bits (31), Expect = 6e-008
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 56 acatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
|||||||| |||||||||||||||||||| |||| ||||||| | |||||||||||||
Sbjct: 739 acatgcattgacaatgggcgggaaagcatttgcattttaactttg-cttcctccatttc 682
>gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_49_B08_A002 3', mRNA sequence
Length = 585
Score = 412 bits (208), Expect = e-113
Identities = 262/280 (93%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 307 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 248
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 247 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 188
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 187 ggcggtggccggaatccagcctccagatggatccccaggactcgcgcatcggcgtccacg 128
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 127 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 68
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 67 cgacgagcaccgcgaagtagacggggttggagccctcctc 28
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 544 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 486
>gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 543
Score = 410 bits (207), Expect = e-113
Identities = 240/251 (95%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 251 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 192
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 191 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 132
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 131 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 72
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 71 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaact 12
Query: 542 cgacgagcacc 552
|||||||||||
Sbjct: 11 cgacgagcacc 1
Score = 77.8 bits (39), Expect = 1e-012
Identities = 82/95 (86%), Gaps = 6/95 (6%)
Strand = Plus / Minus
Query: 20 attaataatttataatttcaatcgccctggtacattacatgcatggacaatgggcgggaa 79
|||||||||||||||| | |||||| ||||||||| ||| |||||||||||||||
Sbjct: 519 attaataatttataatcttaatcgcactggtacatc-----cattgacaatgggcgggaa 465
Query: 80 agcatctgcaaattaacttggccttcctccatttc 114
||||| ||||||||||||| | |||||||||||||
Sbjct: 464 agcatttgcaaattaactttg-cttcctccatttc 431
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 410 bits (207), Expect = e-113
Identities = 252/267 (94%)
Strand = Plus / Minus
Query: 315 gatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttggccaccag 374
|||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 675 gatggaacggtagtaggtgttgggcacccagttggccgggatgacttggttcgccaccag 616
Query: 375 cgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggtggccgga 434
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 615 cgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtgaggcggtggccgga 556
Query: 435 gtccagccgccagatggacccccacgactcgcgcatcggcgtccacgacccggagttggc 494
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 555 gtccagcctccagatggatccccaggactcgcgcatcggcgtccacgacccggagttggc 496
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaattcgacgagcaccgc 436
Query: 555 caggtacaccgggttggacccctcctc 581
| ||| || |||||||| ||||||||
Sbjct: 435 gaagtagacggggttggagccctcctc 409
>gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506649, DNA
sequence
Length = 676
Score = 406 bits (205), Expect = e-112
Identities = 263/281 (93%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 356 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 415
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 416 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 475
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 476 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 535
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
Sbjct: 536 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcggcgtcttcgaatt 595
Query: 542 cgacgagcaccgccaggtacaccgggttgga-cccctcctc 581
||||||||||||| | ||| || |||||||| |||||||||
Sbjct: 596 cgacgagcaccgcgaagtagacggggttggagcccctcctc 636
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 119 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 177
>gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 519
Score = 406 bits (205), Expect = e-112
Identities = 241/253 (95%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 256 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 197
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 196 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 137
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 136 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 77
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 76 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 17
Query: 542 cgacgagcaccgc 554
|||||||||||||
Sbjct: 16 cgacgagcaccgc 4
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 493 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 435
>gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 398 bits (201), Expect = e-109
Identities = 237/249 (95%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 249 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 190
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 189 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 130
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 129 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 70
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 69 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 10
Query: 542 cgacgagca 550
|||||||||
Sbjct: 9 cgacgagca 1
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 486 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 428
>gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_F06_A007 3', mRNA sequence
Length = 526
Score = 392 bits (198), Expect = e-107
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 257 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 198
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 197 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 138
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 137 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 78
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 77 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 18
Query: 542 cgacgagcaccgc 554
| |||| ||||||
Sbjct: 17 cnacgaacaccgc 5
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 494 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 436
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 371 bits (187), Expect = e-101
Identities = 232/247 (93%)
Strand = Plus / Minus
Query: 335 tgggaacccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttgg 394
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 816 tgggcacccagttggccgggatgacttggttcgccaccagcgtcttgccggactcgttgg 757
Query: 395 tgatgcgcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacc 454
|||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |
Sbjct: 756 tgatgcgcagggagaacggcgcggtgaggcggtggccggagtccagcctccagatggatc 697
Query: 455 cccacgactcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgca 514
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cccaggactcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgca 637
Query: 515 ccacgtcgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacc 574
||||||||||||||||||| ||||| |||||||||||||| | ||| || |||||||| |
Sbjct: 636 ccacgtcgccgtcgccgtcttcgaattcgacgagcaccgcgaagtagacggggttggagc 577
Query: 575 cctcctc 581
|||||||
Sbjct: 576 cctcctc 570
>gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_16_D06_A007 3', mRNA sequence
Length = 518
Score = 365 bits (184), Expect = 3e-099
Identities = 256/280 (91%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 337 gctaatactggacaatggaacggtagtaggtgttgggcacccagttggccgggatgactt 278
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| ||||||||||||||||||||||||||||||||| |||||| || ||||||| ||
Sbjct: 277 ggttccccaccagcgtcttgccggactcgttggtgatgcccagggaaaacggcgcggtga 218
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||| ||||||| ||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 217 ggcggtggccggaatccagcctccaaatggatccccaggactcgcgcatcggcgtccacg 158
Query: 482 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaact 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 157 acccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaatt 98
Query: 542 cgacgagcaccgccaggtacaccgggttggacccctcctc 581
| ||||||||||| | ||| || |||||||| ||||||||
Sbjct: 97 caacgagcaccgcgaagtaaacggggttggagccctcctc 58
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 361 bits (182), Expect = 5e-098
Identities = 227/242 (93%)
Strand = Plus / Minus
Query: 340 acccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatg 399
|||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 456 acccagttggcccggatgacttggttcgccaccagcgtcttgccggactcgttggtgatg 397
Query: 400 cgcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccac 459
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct: 396 cgcagggagaacggcgcggtgaggcggtggccggagtccagcctccagatggatccccag 337
Query: 460 gactcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacg 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gactcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacg 277
Query: 520 tcgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcc 579
|||||||||||||| ||||| |||||||||||||| | ||| || |||||||| ||||||
Sbjct: 276 tcgccgtcgccgtcttcgaattcgacgagcaccgcgaagtagacggggttggagccctcc 217
Query: 580 tc 581
||
Sbjct: 216 tc 215
>gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f072g19, DNA
sequence
Length = 756
Score = 349 bits (176), Expect = 2e-094
Identities = 218/232 (93%)
Strand = Plus / Minus
Query: 350 ccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggaga 409
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ccgggatgacttggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggaga 697
Query: 410 agggcgcggcgaggcggtggccggagtccagccgccagatggacccccacgactcgcgca 469
| ||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 696 acggcgcggtgaggcggtggccggagtccagcctccagatggatccccaggactcgcgca 637
Query: 470 tcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgc 577
Query: 530 cgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||| ||||| |||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 576 cgtcttcgaattcgacgagcaccgcgaagtagacggggttggagccctcctc 525
>gb|CX620331.1|CX620331 GABR1_51_E02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_51_E02_A002 3', mRNA sequence
Length = 495
Score = 343 bits (173), Expect = 1e-092
Identities = 206/217 (94%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 217 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 158
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 157 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 98
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 97 ggcggtggccggaatccagcctccagatggatccccaggactcgcgcatcggcgtccacg 38
Query: 482 acccggagttggcctccatgaggtccacctgcaccac 518
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 acccggagttggcctccatgaggtccacctgcaccac 1
Score = 79.8 bits (40), Expect = 3e-013
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 55 tacatgcatggacaatgggcgggaaagcatctgcaaattaacttggccttcctccatttc 114
||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||
Sbjct: 454 tacatgcattgacaatgggcgggaaagcatttgcaaattaactttg-cttcctccatttc 396
>gb|BG560741.1|BG560741 RHIZ2_64_B11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 490
Score = 333 bits (168), Expect = 1e-089
Identities = 198/208 (95%)
Strand = Plus / Minus
Query: 302 gctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacct 361
|||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 208 gctaatactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgactt 149
Query: 362 ggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcga 421
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 148 ggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtga 89
Query: 422 ggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacg 481
||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 88 ggcggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccacg 29
Query: 482 acccggagttggcctccatgaggtccac 509
||||||||||||||||||||||||||||
Sbjct: 28 acccggagttggcctccatgaggtccac 1
Score = 77.8 bits (39), Expect = 1e-012
Identities = 82/95 (86%), Gaps = 6/95 (6%)
Strand = Plus / Minus
Query: 20 attaataatttataatttcaatcgccctggtacattacatgcatggacaatgggcgggaa 79
|||||||||||||||| | |||||| ||||||||| ||| |||||||||||||||
Sbjct: 476 attaataatttataatcttaatcgcactggtacatc-----cattgacaatgggcgggaa 422
Query: 80 agcatctgcaaattaacttggccttcctccatttc 114
||||| ||||||||||||| | |||||||||||||
Sbjct: 421 agcatttgcaaattaactttg-cttcctccatttc 388
>gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505645, DNA
sequence
Length = 444
Score = 325 bits (164), Expect = 3e-087
Identities = 214/231 (92%)
Strand = Plus / Minus
Query: 351 cgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaa 410
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgggatgacttggttcgccaccagcgtcttgccggactcgttggtgatgcgcagggagaa 385
Query: 411 gggcgcggcgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcat 470
| ||||| ||||||||| |||||||||| || ||||||||| ||||| |||||||||||
Sbjct: 384 cgacgcggtgaggcggtgnccggagtccaccctccagatggatccccaggactcgcgcat 325
Query: 471 cggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgcc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgcc 265
Query: 531 gtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcctc 581
||| ||||| |||||||||||||| | ||| || |||||||| ||||||||
Sbjct: 264 gtcttcgaattcgacgagcaccgcgaagtagacggggttggagccctcctc 214
>gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 605
Score = 317 bits (160), Expect = 6e-085
Identities = 247/276 (89%)
Strand = Plus / Minus
Query: 307 tactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttg 366
|||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 519 tactggataatggagcggtagtaggtgttgggcacccagttggccgggatgacctgattg 460
Query: 367 gccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcgg 426
|||||||||||| ||||||||||||| ||||||||||| ||||||||||| || | |
Sbjct: 459 gccaccagcgtcctgccggactcgtttgtgatgcgcagcgagaagggcgcctgcagcctg 400
Query: 427 tggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacgacccg 486
||| |||||| |||| ||||||||| ||||| |||||||||||||||||||| | |||
Sbjct: 399 tggttggagtcgagcctccagatggatccccaggactcgcgcatcggcgtccagtagccg 340
Query: 487 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacg 546
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 339 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccatcttcaaactcgacg 280
Query: 547 agcaccgccaggtacaccgggttggacccctcctcg 582
|||||||| ||||| || | ||||||||||||||||
Sbjct: 279 agcaccgcgaggtagacggagttggacccctcctcg 244
>gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 267
Score = 293 bits (148), Expect = 9e-078
Identities = 223/248 (89%)
Strand = Plus / Minus
Query: 307 tactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttg 366
|||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 250 tactggataatggagcggtagtaggtgttgggcacccagttggccgggatgacctgattg 191
Query: 367 gccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcgg 426
|||||||||||| ||||||||||||| ||||||||||| ||||||||||| || | |
Sbjct: 190 gccaccagcgtcctgccggactcgtttgtgatgcgcagcgagaagggcgcctgcagcctg 131
Query: 427 tggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacgacccg 486
||| |||||| |||| ||||||||| ||||| |||||||||||||||||||| | |||
Sbjct: 130 tggttggagtcgagcctccagatggatccccaggactcgcgcatcggcgtccagtagccg 71
Query: 487 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacg 546
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 70 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccatcttcaaactcgacg 11
Query: 547 agcaccgc 554
||||||||
Sbjct: 10 agcaccgc 3
>gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 354
Score = 293 bits (148), Expect = 9e-078
Identities = 223/248 (89%)
Strand = Plus / Minus
Query: 307 tactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttg 366
|||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 250 tactggataatggagcggtagtaggtgttgggcacccagttggccgggatgacctgattg 191
Query: 367 gccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcgg 426
|||||||||||| ||||||||||||| ||||||||||| ||||||||||| || | |
Sbjct: 190 gccaccagcgtcctgccggactcgtttgtgatgcgcagcgagaagggcgcctgcagcctg 131
Query: 427 tggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccacgacccg 486
||| |||||| |||| ||||||||| ||||| |||||||||||||||||||| | |||
Sbjct: 130 tggttggagtcgagcctccagatggatccccaggactcgcgcatcggcgtccagtatccg 71
Query: 487 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacg 546
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 70 gagttggcctccatgaggtccacctgcaccacgtcgccgtcgccatcttcaaactcgacg 11
Query: 547 agcaccgc 554
||||||||
Sbjct: 10 agcaccgc 3
>gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106333, DNA
sequence
Length = 489
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Plus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 11 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 70
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 71 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 130
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 131 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 190
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 191 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 250
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 251 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 293
>gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 430 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 371
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 370 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 311
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 310 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 251
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 250 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 191
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 190 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 148
>gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_7_B06_A002 3', mRNA sequence
Length = 571
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 362 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 303
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 302 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 243
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 242 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 183
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 182 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 123
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 122 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 80
>gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_E04_A002 3', mRNA sequence
Length = 558
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 340 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 281
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 280 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 221
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 220 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 161
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 160 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 101
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 100 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 58
>gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_23_B04_A002 3', mRNA sequence
Length = 573
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 358 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 299
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 298 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 239
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 238 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 179
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 178 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 119
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 118 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 76
>gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_A01_A002 3', mRNA sequence
Length = 620
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 411 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 352
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 351 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 292
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 291 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 232
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 231 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 172
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 171 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 129
>gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 3', mRNA sequence
Length = 680
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 479 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 420
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 419 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 360
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 359 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 300
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 299 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 240
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 239 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 197
>gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 3', mRNA sequence
Length = 776
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 561 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 502
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 501 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 442
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 441 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 382
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 381 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 322
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 321 actcgacgagcaccgcgaagtaaaccgggttcgagccctcctc 279
>gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_G04_A002 3', mRNA sequence
Length = 695
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 483 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 424
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 423 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 364
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 363 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 304
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 303 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 244
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 243 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 201
>gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 3', mRNA sequence
Length = 755
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 545 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 486
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 485 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 426
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 425 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 366
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 365 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 306
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 305 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 263
>gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 3', mRNA sequence
Length = 668
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 454 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 395
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 394 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 335
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 334 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 275
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 274 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 215
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 214 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 172
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 561 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 502
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 501 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 442
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 441 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 382
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 381 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 322
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 321 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 279
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 276 bits (139), Expect = 2e-072
Identities = 247/283 (87%)
Strand = Plus / Minus
Query: 299 agagctagtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatga 358
||||||| ||||| |||||||| ||||| ||| ||||||| |||||||||| |||||||
Sbjct: 569 agagctaatactgaatgatggagcggtaatagttgttgggcgcccagttggctgggatga 510
Query: 359 cctggttggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcgg 418
|| |||||||||||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 509 cccggttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcct 450
Query: 419 cgaggcggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcc 478
|| | ||| || |||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 449 gcagcctatggttggcgtccagcctccagatggatccccaggactcgcgcatcggcgtcc 390
Query: 479 acgacccggagttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcga 538
| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 389 agtagccggagttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcga 330
Query: 539 actcgacgagcaccgccaggtacaccgggttggacccctcctc 581
|||||||||||||||| | ||| |||||||| || ||||||||
Sbjct: 329 actcgacgagcaccgcgaagtagaccgggttcgagccctcctc 287
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 228,295
Number of Sequences: 832831
Number of extensions: 228295
Number of successful extensions: 73405
Number of sequences better than 0.5: 317
Number of HSP's better than 0.5 without gapping: 314
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 72580
Number of HSP's gapped (non-prelim): 702
length of query: 582
length of database: 491,359,669
effective HSP length: 19
effective length of query: 563
effective length of database: 475,535,880
effective search space: 267726700440
effective search space used: 267726700440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)