BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.3
(1600 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 819 0.0
gb|CD227643.1|CD227643 CCC1_52_B10.g1_A007 Callus culture/c... 737 0.0
gb|CD226700.1|CD226700 CCC1_47_B03.g1_A007 Callus culture/c... 726 0.0
gb|CD222040.1|CD222040 CCC1_1_E10.g1_A007 Callus culture/ce... 696 0.0
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 694 0.0
gb|BG649399.1|BG649399 EM1_78_H11.b1_A002 Embryo 1 (EM1) So... 654 0.0
gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (L... 605 e-171
gb|BE359286.1|BE359286 DG1_40_D05.b1_A002 Dark Grown 1 (DG1... 559 e-157
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 555 e-156
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 555 e-156
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 555 e-156
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 555 e-156
gb|BG241109.1|BG241109 OV1_38_C10.b1_A002 Ovary 1 (OV1) Sor... 549 e-154
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 547 e-153
gb|CD228287.1|CD228287 CCC1_6_H09.g1_A007 Callus culture/ce... 545 e-153
gb|BG560466.1|BG560466 RHIZ2_74_G01.b1_A003 Rhizome2 (RHIZ2... 537 e-150
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 529 e-148
gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/c... 517 e-145
gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/c... 505 e-141
gb|CN146641.1|CN146641 WOUND1_42_E05.g1_A002 Wounded leaves... 496 e-138
gb|BG241855.1|BG241855 RHIZ2_51_E07.b1_A003 Rhizome2 (RHIZ2... 486 e-135
gb|CN127336.1|CN127336 RHOH1_22_A01.g3_A002 Acid- and alkal... 454 e-125
gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1... 442 e-122
gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2... 440 e-121
gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves... 438 e-121
gb|BG412261.1|BG412261 OV2_39_G10.b1_A002 Ovary 2 (OV2) Sor... 414 e-113
gb|BG465688.1|BG465688 RHIZ2_47_E04.b1_A003 Rhizome2 (RHIZ2... 392 e-107
gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation... 371 e-100
gb|BE361499.1|BE361499 DG1_81_B09.b1_A002 Dark Grown 1 (DG1... 321 1e-085
gb|BG158305.1|BG158305 EM1_11_H06.b1_A002 Embryo 1 (EM1) So... 311 1e-082
gb|CW407264.1|CW407264 fsbb001f100k14f0 Sorghum methylation... 309 4e-082
gb|BI351436.1|BI351436 IP1_71_F01.b1_A002 Immature pannicle... 297 2e-078
gb|BF421073.1|BF421073 FM1_6_A06.g1_A003 Floral-Induced Mer... 295 6e-078
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 287 2e-075
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 281 1e-073
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 281 1e-073
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 281 1e-073
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 281 1e-073
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 281 1e-073
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 281 1e-073
gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/ce... 280 4e-073
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 280 4e-073
gb|CW463846.1|CW463846 fsbb001f212l24f0 Sorghum methylation... 276 6e-072
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 274 2e-071
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 274 2e-071
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 272 9e-071
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 272 9e-071
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 272 9e-071
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 272 9e-071
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 266 6e-069
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 264 2e-068
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 264 2e-068
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 264 2e-068
gb|BF480853.1|BF480853 FM1_14_B05.g1_A003 Floral-Induced Me... 260 4e-067
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 258 1e-066
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 256 6e-066
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 256 6e-066
gb|CW389686.1|CW389686 fsbb001f075a01k0 Sorghum methylation... 254 2e-065
gb|BF480803.1|BF480803 FM1_14_B05.b1_A003 Floral-Induced Me... 252 9e-065
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 252 9e-065
gb|CF430814.1|CF430814 NIT1_2_G04.g1_A002 Nitrogen-deficien... 248 1e-063
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 248 1e-063
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 244 2e-062
gb|CN141913.1|CN141913 WOUND1_2_E01.g1_A002 Wounded leaves ... 240 3e-061
gb|CD220835.1|CD220835 CCC1_69_G07.g1_A007 Callus culture/c... 236 5e-060
gb|CD221137.1|CD221137 CCC1_73_H10.g1_A007 Callus culture/c... 236 5e-060
gb|CD223170.1|CD223170 CCC1_26_C06.g1_A007 Callus culture/c... 236 5e-060
gb|CD223182.1|CD223182 CCC1_26_F12.g1_A007 Callus culture/c... 236 5e-060
gb|CD223373.1|CD223373 CCC1_27_E07.g1_A007 Callus culture/c... 236 5e-060
gb|CD223670.1|CD223670 CCC1_29_B07.g1_A007 Callus culture/c... 236 5e-060
gb|CD224343.1|CD224343 CCC1_33_D02.g1_A007 Callus culture/c... 236 5e-060
gb|CD225200.1|CD225200 CCC1_38_F05.g1_A007 Callus culture/c... 236 5e-060
gb|CD228110.1|CD228110 CCC1_5_B06.g1_A007 Callus culture/ce... 236 5e-060
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 236 5e-060
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 236 5e-060
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 236 5e-060
gb|CX607460.1|CX607460 ANR1_8_G05.g1_A002 Anaerobic roots S... 236 5e-060
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 236 5e-060
gb|BG053722.1|BG053722 RHIZ2_9_A01.b1_A003 Rhizome2 (RHIZ2)... 228 1e-057
gb|CD227137.1|CD227137 CCC1_4_D07.g1_A007 Callus culture/ce... 228 1e-057
gb|CD229177.1|CD229177 CCC1_13_B09.g1_A007 Callus culture/c... 228 1e-057
gb|CD430094.1|CD430094 ETH1_13_H07.g1_A002 Ethylene-treated... 224 2e-056
gb|CD431281.1|CD431281 ETH1_7_B06.g1_A002 Ethylene-treated ... 224 2e-056
gb|CN140959.1|CN140959 OX1_48_A09.g1_A002 Oxidatively-stres... 224 2e-056
gb|CL186578.1|CL186578 104_401_10900303_114_32408_024 Sorgh... 216 5e-054
gb|CW028807.1|CW028807 104_256_10499314_114_30399 Sorghum m... 216 5e-054
gb|BE361723.1|BE361723 DG1_81_B09.g1_A002 Dark Grown 1 (DG1... 216 5e-054
gb|CD223869.1|CD223869 CCC1_30_D11.g1_A007 Callus culture/c... 214 2e-053
gb|CD225188.1|CD225188 CCC1_38_A02.g1_A007 Callus culture/c... 214 2e-053
gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/c... 214 2e-053
gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed see... 214 2e-053
gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassino... 214 2e-053
gb|BG411924.1|BG411924 OV2_39_G10.g1_A002 Ovary 2 (OV2) Sor... 212 7e-053
gb|CW229813.1|CW229813 104_671_11207516_116_37270_076 Sorgh... 208 1e-051
gb|CD221711.1|CD221711 CCC1_70_E10.g1_A007 Callus culture/c... 208 1e-051
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 204 2e-050
gb|BI139874.1|BI139874 IP1_46_G07.b1_A002 Immature pannicle... 200 3e-049
gb|CD222212.1|CD222212 CCC1_2_B01.g1_A007 Callus culture/ce... 200 3e-049
gb|CD229498.1|CD229498 CCC1_16_D06.g1_A007 Callus culture/c... 200 3e-049
gb|CL186579.1|CL186579 104_401_10900303_116_32412_024 Sorgh... 196 4e-048
gb|CW463847.1|CW463847 fsbb001f212l24k0 Sorghum methylation... 196 4e-048
gb|CX620046.1|CX620046 GABR1_49_B08.g1_A002 GA- or brassino... 190 3e-046
gb|CN124076.1|CN124076 RHOH1_2_B05.g1_A002 Acid- and alkali... 188 1e-045
gb|BG560106.1|BG560106 RHIZ2_69_D11.b1_A003 Rhizome2 (RHIZ2... 182 7e-044
gb|BG739602.1|BG739602 EM1_82_H04.b1_A002 Embryo 1 (EM1) So... 182 7e-044
gb|BM323374.1|BM323374 PIC1_18_E10.b1_A002 Pathogen-infecte... 182 7e-044
gb|CF427585.1|CF427585 PH1_16_B04.g1_A002 Phosphorous-defic... 182 7e-044
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 180 3e-043
gb|CD432249.1|CD432249 ETH1_26_B01.g1_A002 Ethylene-treated... 180 3e-043
gb|CF427084.1|CF427084 PH1_3_D05.g1_A002 Phosphorous-defici... 180 3e-043
gb|CF429257.1|CF429257 PH1_20_E04.g1_A002 Phosphorous-defic... 180 3e-043
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 178 1e-042
gb|CW134909.1|CW134909 104_519_11117560_116_34831_060 Sorgh... 178 1e-042
gb|CW134910.1|CW134910 104_519_11117560_148_34827_060 Sorgh... 178 1e-042
gb|CW256800.1|CW256800 104_722_11226991_116_35152_032 Sorgh... 178 1e-042
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 178 1e-042
gb|CW323838.1|CW323838 104_818_11476843_148_35908_078 Sorgh... 178 1e-042
gb|CW372271.1|CW372271 fsbb001f048b19k0 Sorghum methylation... 178 1e-042
gb|BE360258.1|BE360258 DG1_62_E04.b1_A002 Dark Grown 1 (DG1... 178 1e-042
gb|BG047717.1|BG047717 OV1_26_H12.b1_A002 Ovary 1 (OV1) Sor... 178 1e-042
gb|BG240144.1|BG240144 OV1_18_D11.b1_A002 Ovary 1 (OV1) Sor... 178 1e-042
gb|CD219737.1|CD219737 CCC1_58_F06.g1_A007 Callus culture/c... 178 1e-042
gb|CD219794.1|CD219794 CCC1_58_F07.g1_A007 Callus culture/c... 178 1e-042
gb|CD430276.1|CD430276 ETH1_17_H06.g1_A002 Ethylene-treated... 178 1e-042
gb|CD432350.1|CD432350 ETH1_29_E02.g1_A002 Ethylene-treated... 178 1e-042
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 178 1e-042
gb|CN134318.1|CN134318 OX1_25_D04.g1_A002 Oxidatively-stres... 178 1e-042
gb|CN134481.1|CN134481 OX1_26_D04.g1_A002 Oxidatively-stres... 178 1e-042
gb|CN134664.1|CN134664 OX1_27_E09.g1_A002 Oxidatively-stres... 178 1e-042
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 178 1e-042
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 178 1e-042
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 178 1e-042
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 174 2e-041
gb|CD227153.1|CD227153 CCC1_4_A10.g1_A007 Callus culture/ce... 174 2e-041
gb|CW060786.1|CW060786 104_304_10520046_114_30143 Sorghum m... 172 6e-041
gb|CW115054.1|CW115054 104_490_11106333_116_34592_095 Sorgh... 172 6e-041
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 172 6e-041
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 172 6e-041
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 172 6e-041
gb|BG559467.1|BG559467 RHIZ2_55_B12.b1_A003 Rhizome2 (RHIZ2... 172 6e-041
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 172 6e-041
gb|CN135238.1|CN135238 OX1_31_B04.g1_A002 Oxidatively-stres... 172 6e-041
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 167 4e-039
gb|CN128492.1|CN128492 RHOH1_29_H02.g1_A002 Acid- and alkal... 167 4e-039
gb|BE356171.1|BE356171 DG1_123_G07.b1_A002 Dark Grown 1 (DG... 165 2e-038
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 163 6e-038
gb|CW186182.1|CW186182 104_604_11166433_116_36705_013 Sorgh... 159 1e-036
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 159 1e-036
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 159 1e-036
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 159 1e-036
gb|CD430578.1|CD430578 ETH1_19_F11.g1_A002 Ethylene-treated... 159 1e-036
gb|CN127847.1|CN127847 RHOH1_25_A03.g1_A002 Acid- and alkal... 159 1e-036
gb|CX610279.1|CX610279 ANR1_17_E04.g1_A002 Anaerobic roots ... 159 1e-036
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 157 4e-036
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 157 4e-036
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 157 4e-036
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 157 4e-036
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 157 4e-036
gb|CD226681.1|CD226681 CCC1_47_B03.b1_A007 Callus culture/c... 157 4e-036
gb|CD228170.1|CD228170 CCC1_6_H09.b1_A007 Callus culture/ce... 157 4e-036
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 157 4e-036
gb|BG357041.1|BG357041 OV2_9_C01.b1_A002 Ovary 2 (OV2) Sorg... 155 2e-035
gb|CF427443.1|CF427443 PH1_1_A07.g1_A002 Phosphorous-defici... 155 2e-035
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 155 2e-035
gb|BE359360.1|BE359360 DG1_40_D05.g1_A002 Dark Grown 1 (DG1... 153 6e-035
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 151 2e-034
gb|CL177774.1|CL177774 104_385_10894067_116_31914_131 Sorgh... 149 9e-034
gb|CW038651.1|CW038651 104_271_10505052_115_30388 Sorghum m... 149 9e-034
gb|CW123167.1|CW123167 104_502_11111067_148_34685_010 Sorgh... 149 9e-034
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 149 9e-034
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 149 9e-034
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 149 9e-034
gb|CN127845.1|CN127845 RHOH1_25_A01.g1_A002 Acid- and alkal... 147 4e-033
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 145 1e-032
gb|BG241748.1|BG241748 RHIZ2_50_G03.b1_A003 Rhizome2 (RHIZ2... 145 1e-032
gb|BG465539.1|BG465539 RHIZ2_45_G08.b1_A003 Rhizome2 (RHIZ2... 145 1e-032
gb|BG466016.1|BG466016 RHIZ2_47_E04.g1_A003 Rhizome2 (RHIZ2... 145 1e-032
gb|CW125506.1|CW125506 104_505_11112364_148_34712_004 Sorgh... 143 6e-032
gb|BG356726.1|BG356726 OV2_9_C01.g1_A002 Ovary 2 (OV2) Sorg... 143 6e-032
gb|BI245881.1|BI245881 IP1_64_F11.b1_A002 Immature pannicle... 143 6e-032
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 143 6e-032
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 141 2e-031
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 141 2e-031
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 141 2e-031
gb|CW225715.1|CW225715 104_663_11204503_148_37208_024 Sorgh... 137 4e-030
gb|CF430704.1|CF430704 NIT1_2_G04.b1_A002 Nitrogen-deficien... 135 1e-029
gb|BF586439.1|BF586439 FM1_28_B09.b1_A003 Floral-Induced Me... 133 6e-029
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 133 6e-029
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 133 6e-029
gb|BZ367792.1|BZ367792 id06f03.b1 WGS-SbicolorF (JM107 adap... 131 2e-028
gb|BG559514.1|BG559514 RHIZ2_55_F12.b1_A003 Rhizome2 (RHIZ2... 131 2e-028
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 131 2e-028
gb|CW067110.1|CW067110 104_314_10524068_114_30126 Sorghum m... 129 9e-028
gb|BG159679.1|BG159679 OV2_7_F12.b1_A002 Ovary 2 (OV2) Sorg... 129 9e-028
gb|BG241401.1|BG241401 RHIZ2_51_E07.g1_A003 Rhizome2 (RHIZ2... 129 9e-028
gb|BG558178.1|BG558178 RHIZ2_64_A10.b1_A003 Rhizome2 (RHIZ2... 129 9e-028
gb|CD212542.1|CD212542 HS1_6_G05.b1_A012 Heat-shocked seedl... 129 9e-028
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 127 3e-027
gb|CN131508.1|CN131508 RHOH1_48_C07.g1_A002 Acid- and alkal... 125 1e-026
gb|CL191208.1|CL191208 104_410_10906632_114_32533_096 Sorgh... 123 5e-026
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 123 5e-026
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 123 5e-026
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 123 5e-026
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 123 5e-026
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 123 5e-026
gb|CW229188.1|CW229188 104_670_11207171_116_37259_042 Sorgh... 123 5e-026
gb|CW229189.1|CW229189 104_670_11207171_148_37260_042 Sorgh... 123 5e-026
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 123 5e-026
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 123 5e-026
gb|BG102852.1|BG102852 RHIZ2_34_B12.b1_A003 Rhizome2 (RHIZ2... 123 5e-026
gb|BG556160.1|BG556160 EM1_68_E05.b1_A002 Embryo 1 (EM1) So... 123 5e-026
gb|BG558190.1|BG558190 RHIZ2_64_B11.b1_A003 Rhizome2 (RHIZ2... 123 5e-026
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 123 5e-026
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 123 5e-026
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 123 5e-026
gb|CD227950.1|CD227950 CCC1_56_F12.g1_A007 Callus culture/c... 123 5e-026
gb|CD463948.1|CD463948 ETH1_47_B11.g1_A002 Ethylene-treated... 123 5e-026
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 123 5e-026
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 123 5e-026
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 123 5e-026
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 123 5e-026
gb|CW061064.1|CW061064 104_304_10520199_114_30143 Sorghum m... 121 2e-025
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 121 2e-025
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 121 2e-025
gb|AW286877.2|AW286877 LG1_222_F02.b1_A002 Light Grown 1 (L... 121 2e-025
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 121 2e-025
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 121 2e-025
gb|BE362269.1|BE362269 DG1_85_A02.b1_A002 Dark Grown 1 (DG1... 119 8e-025
gb|BG101785.1|BG101785 EM1_5_B12.b1_A002 Embryo 1 (EM1) Sor... 115 1e-023
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 115 1e-023
gb|CW061065.1|CW061065 104_304_10520199_115_30144 Sorghum m... 113 5e-023
gb|CW120690.1|CW120690 104_498_11109474_148_34654_075 Sorgh... 113 5e-023
gb|CW401520.1|CW401520 fsbb001f092f20f0 Sorghum methylation... 113 5e-023
gb|BF657491.1|BF657491 OV2_24_G10.b1_A002 Ovary 2 (OV2) Sor... 113 5e-023
gb|AW286828.2|AW286828 LG1_222_A03.b1_A002 Light Grown 1 (L... 111 2e-022
gb|BI351226.1|BI351226 IP1_71_F01.g1_A002 Immature pannicle... 111 2e-022
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 109 8e-022
gb|CW186183.1|CW186183 104_604_11166433_148_36706_013 Sorgh... 109 8e-022
gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) So... 109 8e-022
gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2... 109 8e-022
gb|BG560741.1|BG560741 RHIZ2_64_B11.g1_A003 Rhizome2 (RHIZ2... 109 8e-022
gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle... 109 8e-022
gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/c... 109 8e-022
gb|AW284228.2|AW284228 LG1_268_C03.g1_A002 Light Grown 1 (L... 107 3e-021
gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1... 107 3e-021
gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2... 107 3e-021
gb|BI245792.1|BI245792 IP1_64_D12.g1_A002 Immature pannicle... 107 3e-021
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 105 1e-020
gb|CW020721.1|CW020721 104_109_10409131_114_30493 Sorghum m... 105 1e-020
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 105 1e-020
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 105 1e-020
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 105 1e-020
gb|CW064935.1|CW064935 104_311_10522851_115_30121 Sorghum m... 103 5e-020
gb|BG412663.1|BG412663 OV2_33_C02.b1_A002 Ovary 2 (OV2) Sor... 101 2e-019
gb|CX620331.1|CX620331 GABR1_51_E02.b1_A002 GA- or brassino... 101 2e-019
gb|AW286900.2|AW286900 LG1_222_H02.b1_A002 Light Grown 1 (L... 100 8e-019
gb|CW359785.1|CW359785 fsbb001f027j03f0 Sorghum methylation... 96 1e-017
gb|CF480711.1|CF480711 POL1_67_A06.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF480730.1|CF480730 POL1_67_C02.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF481066.1|CF481066 POL1_69_F07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF481234.1|CF481234 POL1_70_F07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF481418.1|CF481418 POL1_71_H03.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF481566.1|CF481566 POL1_72_E12.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF482510.1|CF482510 POL1_7_A01.g1_A002 Pollen Sorghum bi... 96 1e-017
gb|CF482685.1|CF482685 POL1_8_B05.g1_A002 Pollen Sorghum bi... 96 1e-017
gb|CF483227.1|CF483227 POL1_12_E06.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF483231.1|CF483231 POL1_12_E10.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF483250.1|CF483250 POL1_12_H10.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF483491.1|CF483491 POL1_22_D07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF484048.1|CF484048 POL1_2_G04.g1_A002 Pollen Sorghum bi... 96 1e-017
gb|CF484303.1|CF484303 POL1_4_A10.g1_A002 Pollen Sorghum bi... 96 1e-017
gb|CF484478.1|CF484478 POL1_25_C05.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF484676.1|CF484676 POL1_26_G05.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF484688.1|CF484688 POL1_26_H05.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF484984.1|CF484984 POL1_28_F03.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF485134.1|CF485134 POL1_29_D08.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF485187.1|CF485187 POL1_30_A04.b1_A002 Pollen Sorghum b... 96 1e-017
gb|CF486596.1|CF486596 POL1_38_D06.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF486598.1|CF486598 POL1_38_D08.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF486743.1|CF486743 POL1_39_B06.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF486803.1|CF486803 POL1_39_G10.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF487066.1|CF487066 POL1_41_C03.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF488078.1|CF488078 POL1_47_D10.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF488363.1|CF488363 POL1_49_A10.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF488671.1|CF488671 POL1_51_B05.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF488732.1|CF488732 POL1_51_G09.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CF489435.1|CF489435 POL1_57_C07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CW089886.1|CW089886 104_435_10948967_116_32598_088 Sorgh... 92 2e-016
gb|CW369177.1|CW369177 fsbb001f043h16f0 Sorghum methylation... 92 2e-016
gb|CW394064.1|CW394064 fsbb001f081h04k0 Sorghum methylation... 92 2e-016
gb|CW423364.1|CW423364 fsbb001f133c09k0 Sorghum methylation... 92 2e-016
gb|CD430144.1|CD430144 ETH1_17_H06.b1_A002 Ethylene-treated... 92 2e-016
gb|CD432263.1|CD432263 ETH1_29_E02.b1_A002 Ethylene-treated... 92 2e-016
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 92 2e-016
gb|CX616493.1|CX616493 GABR1_28_F03.b1_A002 GA- or brassino... 92 2e-016
gb|BG412378.1|BG412378 OV2_33_C02.g1_A002 Ovary 2 (OV2) Sor... 90 7e-016
gb|BI211437.1|BI211437 IP1_60_G05.b1_A002 Immature pannicle... 88 3e-015
gb|BI643748.1|BI643748 IP1_56_E10.b1_A002 Immature pannicle... 88 3e-015
gb|CF429485.1|CF429485 PH1_22_A01.b1_A002 Phosphorous-defic... 88 3e-015
gb|CF480457.1|CF480457 POL1_65_H06.g1_A002 Pollen Sorghum b... 88 3e-015
gb|CW171386.1|CW171386 104_582_11155714_148_36531_045 Sorgh... 86 1e-014
gb|CW235743.1|CW235743 104_691_11215169_148_37401_075 Sorgh... 86 1e-014
gb|CW321279.1|CW321279 104_814_11475462_148_35937_021 Sorgh... 86 1e-014
gb|CW387886.1|CW387886 fsbb001f072g19k0 Sorghum methylation... 86 1e-014
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 86 1e-014
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 86 1e-014
gb|CD235977.1|CD235977 SS1_25_E11.b1_A012 Salt-stressed see... 86 1e-014
gb|CF486763.1|CF486763 POL1_39_D02.g1_A002 Pollen Sorghum b... 86 1e-014
gb|CF488833.1|CF488833 POL1_52_B08.g1_A002 Pollen Sorghum b... 86 1e-014
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 86 1e-014
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 86 1e-014
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 86 1e-014
gb|CL155533.1|CL155533 104_341_10782207_116_31472_303 Sorgh... 84 5e-014
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 80 7e-013
gb|CF481859.1|CF481859 POL1_74_D05.g1_A002 Pollen Sorghum b... 80 7e-013
gb|BZ346961.1|BZ346961 hw02c11.b1 WGS-SbicolorF (JM107 adap... 78 3e-012
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 78 3e-012
gb|CW072445.1|CW072445 104_325_10592270_114_30536 Sorghum m... 78 3e-012
gb|CW113135.1|CW113135 104_487_11105276_116_34556_076 Sorgh... 78 3e-012
gb|CW223947.1|CW223947 104_660_11203186_148_37446_047 Sorgh... 78 3e-012
gb|CW322132.1|CW322132 104_815_11475928_116_35944_052 Sorgh... 78 3e-012
gb|BI141507.1|BI141507 IP1_53_A07.b1_A002 Immature pannicle... 78 3e-012
gb|CF480248.1|CF480248 POL1_64_D03.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF480285.1|CF480285 POL1_64_G06.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF480333.1|CF480333 POL1_65_D03.b1_A002 Pollen Sorghum b... 78 3e-012
gb|CF480411.1|CF480411 POL1_65_D03.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF481055.1|CF481055 POL1_69_E05.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF481186.1|CF481186 POL1_70_B02.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF482883.1|CF482883 POL1_9_F05.g1_A002 Pollen Sorghum bi... 78 3e-012
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 78 3e-012
gb|CF483330.1|CF483330 POL1_21_B07.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF484051.1|CF484051 POL1_2_G08.g1_A002 Pollen Sorghum bi... 78 3e-012
gb|CF485106.1|CF485106 POL1_29_A12.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF485127.1|CF485127 POL1_29_C12.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF485306.1|CF485306 POL1_30_E09.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF486570.1|CF486570 POL1_38_B03.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF486682.1|CF486682 POL1_39_D02.b1_A002 Pollen Sorghum b... 78 3e-012
gb|CF486737.1|CF486737 POL1_39_A11.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF486753.1|CF486753 POL1_39_C04.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487232.1|CF487232 POL1_42_C05.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487377.1|CF487377 POL1_43_A08.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487409.1|CF487409 POL1_43_D04.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487428.1|CF487428 POL1_43_F02.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487564.1|CF487564 POL1_44_C08.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 78 3e-012
gb|CF487872.1|CF487872 POL1_46_A03.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF488401.1|CF488401 POL1_49_E12.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CF488708.1|CF488708 POL1_51_E07.g1_A002 Pollen Sorghum b... 78 3e-012
gb|CW060787.1|CW060787 104_304_10520046_115_30144 Sorghum m... 76 1e-011
gb|AI724776.1|AI724776 RHIZ1_9_A10.y2_A001 Rhizome1 (RHIZ1)... 76 1e-011
gb|CF427571.1|CF427571 PH1_16_B04.b1_A002 Phosphorous-defic... 76 1e-011
gb|CN124005.1|CN124005 RHOH1_2_B05.b1_A002 Acid- and alkali... 76 1e-011
gb|BG559878.1|BG559878 RHIZ2_74_G01.g1_A003 Rhizome2 (RHIZ2... 74 4e-011
gb|CF483753.1|CF483753 POL1_24_B02.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF485258.1|CF485258 POL1_30_A03.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF485494.1|CF485494 POL1_31_H02.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF485662.1|CF485662 POL1_32_G11.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF485937.1|CF485937 POL1_34_E02.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF487597.1|CF487597 POL1_44_F08.g1_A002 Pollen Sorghum b... 74 4e-011
gb|CF487896.1|CF487896 POL1_46_C05.g1_A002 Pollen Sorghum b... 74 4e-011
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 72 2e-010
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 72 2e-010
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 72 2e-010
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 72 2e-010
gb|BE357900.1|BE357900 DG1_23_H03.b1_A002 Dark Grown 1 (DG1... 72 2e-010
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 72 2e-010
gb|CD432148.1|CD432148 ETH1_26_B01.b1_A002 Ethylene-treated... 72 2e-010
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 72 2e-010
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 72 2e-010
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 72 2e-010
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 72 2e-010
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 72 2e-010
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 72 2e-010
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 72 2e-010
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 70 7e-010
gb|CW028553.1|CW028553 104_255_10499163_114_30394 Sorghum m... 70 7e-010
gb|CW229431.1|CW229431 104_670_11207297_116_37255_067 Sorgh... 70 7e-010
gb|CW247382.1|CW247382 104_708_11221754_148_36079_009 Sorgh... 70 7e-010
gb|CW271902.1|CW271902 104_744_11403221_116_35346_027 Sorgh... 70 7e-010
gb|CW271903.1|CW271903 104_744_11403221_116_36221_027 Sorgh... 70 7e-010
gb|CW286416.1|CW286416 104_764_11410865_148_35517_077 Sorgh... 70 7e-010
gb|CD225958.1|CD225958 CCC1_42_G10.g1_A007 Callus culture/c... 70 7e-010
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF480969.1|CF480969 POL1_69_E05.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF485229.1|CF485229 POL1_30_E09.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF486491.1|CF486491 POL1_38_B03.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF487513.1|CF487513 POL1_44_F08.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF487815.1|CF487815 POL1_46_C05.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF488330.1|CF488330 POL1_49_E12.b1_A002 Pollen Sorghum b... 70 7e-010
gb|CF488469.1|CF488469 POL1_50_E04.b1_A002 Pollen Sorghum b... 70 7e-010
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 70 7e-010
gb|BZ423938.1|BZ423938 id55a11.g1 WGS-SbicolorF (DH5a methy... 68 3e-009
gb|CL177775.1|CL177775 104_385_10894067_148_31913_131 Sorgh... 68 3e-009
gb|CW028554.1|CW028554 104_255_10499163_116_30393 Sorghum m... 68 3e-009
gb|CW072446.1|CW072446 104_325_10592270_116_30540 Sorghum m... 68 3e-009
gb|CW089326.1|CW089326 104_434_10948646_114_32603_053 Sorgh... 68 3e-009
gb|CW219862.1|CW219862 104_654_11197030_148_37147_091 Sorgh... 68 3e-009
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 68 3e-009
gb|CW303659.1|CW303659 104_788_11465359_148_35697_028 Sorgh... 68 3e-009
gb|CW322133.1|CW322133 104_815_11475928_148_35943_052 Sorgh... 68 3e-009
gb|CW361579.1|CW361579 fsbb001f030d18k0 Sorghum methylation... 68 3e-009
gb|CW376520.1|CW376520 fsbb001f054h04k0 Sorghum methylation... 68 3e-009
gb|AW284995.1|AW284995 LG1_297_A04.g1_A002 Light Grown 1 (L... 68 3e-009
gb|AW677581.1|AW677581 DG1_8_G07.g1_A002 Dark Grown 1 (DG1)... 68 3e-009
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 68 3e-009
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 68 3e-009
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 68 3e-009
gb|BI139612.1|BI139612 IP1_46_G07.g1_A002 Immature pannicle... 68 3e-009
gb|BI351103.1|BI351103 IP1_69_H10.g1_A002 Immature pannicle... 68 3e-009
gb|CD220740.1|CD220740 CCC1_69_G07.b1_A007 Callus culture/c... 68 3e-009
gb|CD220860.1|CD220860 CCC1_72_B03.b1_A007 Callus culture/c... 68 3e-009
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 68 3e-009
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 68 3e-009
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 68 3e-009
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 68 3e-009
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 68 3e-009
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 68 3e-009
gb|CF484108.1|CF484108 POL1_3_E05.b1_A002 Pollen Sorghum bi... 68 3e-009
gb|CL159497.1|CL159497 104_349_10804291_114_31381_115 Sorgh... 66 1e-008
gb|CW064934.1|CW064934 104_311_10522851_114_30122 Sorghum m... 66 1e-008
gb|CW137101.1|CW137101 104_523_11119113_148_34864_041 Sorgh... 66 1e-008
gb|CW175269.1|CW175269 104_587_11157848_148_36568_020 Sorgh... 66 1e-008
gb|CW223946.1|CW223946 104_660_11203186_116_37447_047 Sorgh... 66 1e-008
gb|CW228007.1|CW228007 104_667_11206124_116_37246_070 Sorgh... 66 1e-008
gb|CW228008.1|CW228008 104_667_11206124_148_37245_070 Sorgh... 66 1e-008
gb|CW333020.1|CW333020 104_830_11481720_148_36038_082 Sorgh... 66 1e-008
gb|CW784462.1|CW784462 SP__Bb0024I23.r SP__Bb Sorghum propi... 66 1e-008
gb|BQ656036.1|BQ656036 pRC0324 Sorghum halepense rhizome cD... 66 1e-008
gb|CF480637.1|CF480637 POL1_67_A06.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF480649.1|CF480649 POL1_67_C02.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF480745.1|CF480745 POL1_67_D07.g1_A002 Pollen Sorghum b... 66 1e-008
gb|CF480980.1|CF480980 POL1_69_F07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF481103.1|CF481103 POL1_70_B02.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF481147.1|CF481147 POL1_70_F07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF481333.1|CF481333 POL1_71_H03.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF481889.1|CF481889 POL1_75_A04.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF482067.1|CF482067 POL1_76_H03.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF482434.1|CF482434 POL1_7_A01.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF482607.1|CF482607 POL1_8_B05.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF482799.1|CF482799 POL1_9_F05.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF483137.1|CF483137 POL1_12_B09.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF483265.1|CF483265 POL1_21_B07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF483416.1|CF483416 POL1_22_D07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF483974.1|CF483974 POL1_2_G02.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF483976.1|CF483976 POL1_2_G04.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF483980.1|CF483980 POL1_2_G08.b1_A002 Pollen Sorghum bi... 66 1e-008
gb|CF484397.1|CF484397 POL1_25_C05.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF485051.1|CF485051 POL1_29_D08.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF485186.1|CF485186 POL1_30_A03.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF485259.1|CF485259 POL1_30_A04.g1_A002 Pollen Sorghum b... 66 1e-008
gb|CF486352.1|CF486352 POL1_37_E10.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF486657.1|CF486657 POL1_39_A11.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF487538.1|CF487538 POL1_44_H12.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF487722.1|CF487722 POL1_45_C01.g1_A002 Pollen Sorghum b... 66 1e-008
gb|CF487995.1|CF487995 POL1_47_D10.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF488022.1|CF488022 POL1_47_G06.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF488299.1|CF488299 POL1_49_A10.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF488600.1|CF488600 POL1_51_B05.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF488631.1|CF488631 POL1_51_E07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF488821.1|CF488821 POL1_52_A06.g1_A002 Pollen Sorghum b... 66 1e-008
gb|CF489097.1|CF489097 POL1_54_H09.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CF489352.1|CF489352 POL1_57_C07.b1_A002 Pollen Sorghum b... 66 1e-008
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 64 4e-008
gb|BG048913.1|BG048913 OV1_24_G03.b1_A002 Ovary 1 (OV1) Sor... 64 4e-008
gb|CF429640.1|CF429640 PH1_23_B11.b1_A002 Phosphorous-defic... 64 4e-008
gb|CF480054.1|CF480054 POL1_63_A12.g1_A002 Pollen Sorghum b... 64 4e-008
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 64 4e-008
gb|CW280307.1|CW280307 104_755_11407550_116_35442_055 Sorgh... 62 2e-007
gb|CW280308.1|CW280308 104_755_11407550_148_35446_055 Sorgh... 62 2e-007
gb|CW333019.1|CW333019 104_830_11481720_116_36037_082 Sorgh... 62 2e-007
gb|CW333675.1|CW333675 104_831_11482081_148_36044_001 Sorgh... 62 2e-007
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 62 2e-007
gb|CD229897.1|CD229897 CCC1_20_G12.g1_A007 Callus culture/c... 62 2e-007
gb|CF480661.1|CF480661 POL1_67_D07.b1_A002 Pollen Sorghum b... 62 2e-007
gb|CF486443.1|CF486443 POL1_37_E10.g1_A002 Pollen Sorghum b... 62 2e-007
gb|CF488105.1|CF488105 POL1_47_G06.g1_A002 Pollen Sorghum b... 62 2e-007
gb|CW030788.1|CW030788 104_259_10500427_114_30397 Sorghum m... 60 7e-007
gb|BG049195.1|BG049195 OV1_24_G03.g1_A002 Ovary 1 (OV1) Sor... 60 7e-007
gb|BG559187.1|BG559187 RHIZ2_55_F12.g1_A003 Rhizome2 (RHIZ2... 60 7e-007
gb|BG560732.1|BG560732 RHIZ2_64_A10.g1_A003 Rhizome2 (RHIZ2... 60 7e-007
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 60 7e-007
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 60 7e-007
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 60 7e-007
gb|CD229161.1|CD229161 CCC1_13_B09.b1_A007 Callus culture/c... 60 7e-007
gb|CF429689.1|CF429689 PH1_23_B04.g1_A002 Phosphorous-defic... 60 7e-007
gb|CF429693.1|CF429693 PH1_23_B11.g1_A002 Phosphorous-defic... 60 7e-007
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 60 7e-007
gb|CN129508.1|CN129508 RHOH1_35_G04.g1_A002 Acid- and alkal... 60 7e-007
gb|CW140252.1|CW140252 104_530_11135684_148_34917_068 Sorgh... 58 3e-006
gb|CW165028.1|CW165028 104_573_11152290_148_36474_075 Sorgh... 58 3e-006
gb|CW218082.1|CW218082 104_651_11196005_148_37457_021 Sorgh... 58 3e-006
gb|CW446821.1|CW446821 fsbb001f179k13f0 Sorghum methylation... 58 3e-006
gb|BG357684.1|BG357684 OV2_29_A05.b1_A002 Ovary 2 (OV2) Sor... 58 3e-006
gb|CF480255.1|CF480255 POL1_64_D10.g1_A002 Pollen Sorghum b... 58 3e-006
>gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 819 bits (413), Expect = 0.0
Identities = 473/493 (95%)
Strand = Plus / Minus
Query: 767 agaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccaggactcgc 826
|||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||||||
Sbjct: 505 agaagggcggctgcatgcggtggttggtgtccatccgccagatggatcctcaggactcgc 446
Query: 827 gcatcggcgtccaccgccccgtcggcgggccgcgcgccgtcttggactccatcaggtcca 886
|||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 445 gcatgggcgtccaccgccccgtcgggggcccgtgcgccgtcttggactccatcaggtcca 386
Query: 887 cctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgcgaagtagacggggt 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgcgaagtagacggggt 326
Query: 947 tcgagtactcctccacgtggaacccgatcttcaggcccgggaactcgcacggcaccctgg 1006
|||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 325 tcgagtactcctccacgtggaaaccgatcttcagcccagggaactcgcacggcaccctgg 266
Query: 1007 tgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggcttggcca 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggcttggcca 206
Query: 1067 gcctgccgaacgcagtgccgctgaggtcgaagtggtacttggacaccgggtagtagttca 1126
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gcctgccgaacgccgtgccgctgaggtcgaagtggtacttggacaccgggtagtagttca 146
Query: 1127 tgtcggtgatgatcaccgtctccgtccgcccggagcaggacgggtccttcctgcaccgaa 1186
|||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||
Sbjct: 145 tgtccgtgatgatcaccgtctccgcccgcccggagcaggatctgtccttggtgcaccgaa 86
Query: 1187 tcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcaggagc 1246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 85 tcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcaggacc 26
Query: 1247 ccatggacatgaa 1259
|||||||||||||
Sbjct: 25 ccatggacatgaa 13
>gb|CD227643.1|CD227643 CCC1_52_B10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_B10_A007 5', mRNA sequence
Length = 666
Score = 737 bits (372), Expect = 0.0
Identities = 476/509 (93%), Gaps = 9/509 (1%)
Strand = Plus / Minus
Query: 985 gggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttg 1044
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 658 gggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagctng 599
Query: 1045 tcgttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtac 1104
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 598 tcgttgaggccgggcttggccagcctgccgaacgccgtgccgctgaggtcgaagtggtac 539
Query: 1105 ttggacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcag 1164
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 538 ttggacaccgggtagtagttcatgtccgtgatgatcaccgtctccgcccgcccggagcag 479
Query: 1165 gacgggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaac 1224
|| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gatctgtccttggtgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaac 419
Query: 1225 aatggctggttgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaat 1284
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 418 aatggctggttgccgcaggaccccatggacatgaatgggtactggttggtgtgcttgaag 359
Query: 1285 ccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggcc 1344
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccgcacgcgccaccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggcc 299
Query: 1345 cgggccctctgccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtg 1404
|||||| |||||||||||||||||||||||||||||||||||| | || ||||||||| |
Sbjct: 298 cgggccttctgccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcg 239
Query: 1405 ccggtgccg---gcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcg 1458
|||| |||| ||||||| ||||||| ||||||||| ||||||| | |||||||||
Sbjct: 238 ccggcgccggccgcgtccgtcgcgtcgaactgggcctcccggcactcgcctcctccggcg 179
Query: 1459 agcagggccaggaggagcacgagcgccgc 1487
||||||||| |||||||||||||||||
Sbjct: 178 agcagggcc---aggagcacgagcgccgc 153
>gb|CD226700.1|CD226700 CCC1_47_B03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_B03_A007 5', mRNA sequence
Length = 654
Score = 726 bits (366), Expect = 0.0
Identities = 474/508 (93%), Gaps = 9/508 (1%)
Strand = Plus / Minus
Query: 986 ggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgt 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 654 ggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagctagt 595
Query: 1046 cgttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtact 1105
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 594 cgttgaggccgggcttggccagcctgccgaacgccgtgccgctgaggtcgaagtggtact 535
Query: 1106 tggacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcagg 1165
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 534 tggacaccgggtagtagttcatgtccgtgatgatcaccgtctccgcccgcccggagcagg 475
Query: 1166 acgggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaaca 1225
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atctgtccttggtgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaaca 415
Query: 1226 atggctggttgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaatc 1285
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 414 atggctggttgccgcaggaccccatggacatgaatgggtactggttggtgtgcttgaagc 355
Query: 1286 cgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggccc 1345
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cgcacgcgccaccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggccc 295
Query: 1346 gggccctctgccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtgc 1405
|| || |||||||||||||||||||||||||||||||||||| | || ||||||||| ||
Sbjct: 294 ggtccttctgccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcgc 235
Query: 1406 cggtgccg---gcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcga 1459
||| |||| ||||||| ||||||| ||||||||| ||||||| | ||||||||||
Sbjct: 234 cggcgccggccgcgtccgtcgcgtcgaactgggcctcccggcactcgcctcctccggcga 175
Query: 1460 gcagggccaggaggagcacgagcgccgc 1487
|||||||| |||||||||||||||||
Sbjct: 174 gcagggcc---aggagcacgagcgccgc 150
>gb|CD222040.1|CD222040 CCC1_1_E10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_E10_A007 5', mRNA sequence
Length = 641
Score = 696 bits (351), Expect = 0.0
Identities = 456/489 (93%), Gaps = 9/489 (1%)
Strand = Plus / Minus
Query: 1005 ggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggcttggc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggcttggc 582
Query: 1065 cagcctgccgaacgcagtgccgctgaggtcgaagtggtacttggacaccgggtagtagtt 1124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cagcctgccgaacgccgtgccgctgaggtcgaagtggtacttggacaccgggtagtagtt 522
Query: 1125 catgtcggtgatgatcaccgtctccgtccgcccggagcaggacgggtccttcctgcaccg 1184
|||||| ||||||||||||||||||| ||||||||||||||| |||| | |||||||
Sbjct: 521 catgtccgtgatgatcaccgtctccgcccgcccggagcaggatctgtccctggtgcaccg 462
Query: 1185 aatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcagga 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcagga 402
Query: 1245 gcccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcgccaccgttgcc 1304
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 401 ccccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcgccaccgttgtc 342
Query: 1305 gtcggggccggcgccgttgggctggccgtaccaggtggcccgggccctctgccaggggcc 1364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 341 gtcggggccggcgccgttgggctggccgtaccaggtggcccgggccttctgccaggggcc 282
Query: 1365 ccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgccg---gcgtccgc 1421
||||||||||||||||||||||| | || ||||||||| ||||| |||| |||||||
Sbjct: 281 ccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccggccgcgtccgt 222
Query: 1422 ggcgtcgagctgggcctctcggcactgg---cctccggcgagcagggccaggaggagcac 1478
||||||| ||||||||| ||||||| | |||||||||||||||||| ||||||||
Sbjct: 221 cgcgtcgaactgggcctcccggcactcgcctcctccggcgagcagggcc---aggagcac 165
Query: 1479 gagcgccgc 1487
|||||||||
Sbjct: 164 gagcgccgc 156
>gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_22_A01_A002 3', mRNA sequence
Length = 763
Score = 694 bits (350), Expect = 0.0
Identities = 398/414 (96%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 418 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 359
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 299
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| || |||||||||||||| ||||||||||||||
Sbjct: 298 gtggttggtgtccatccgccagatggatcctcaggactcgcgcatgggcgtccaccgccc 239
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 179
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 119
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctggtgaactcgatgtcgatgat 1025
||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaaaccgatcttcagcccagggaactcgcacggcaccctggtgaactcgatgtcgatgat 59
Query: 1026 gccggagtggcggagcttgtcgttgaggccgggcttggccagcctgccgaacgc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gccggagtggcggagcttgtcgttgaggccgggcttggccagcctgccgaacgc 5
Score = 50.1 bits (25), Expect = 6e-004
Identities = 72/82 (87%), Gaps = 8/82 (9%)
Strand = Plus / Minus
Query: 329 agggtcacgcacggcatg-acatgccagcctgac---cccacaaaca-tcgcacacgacg 383
|||||||||||| |||| |||||||||||| || |||||||||| ||||||| ||||
Sbjct: 763 agggtcacgcac--catgcacatgccagccttacagacccacaaacactcgcacatgacg 706
Query: 384 cctgacctaaaaagcgcgcccc 405
|||||||| |||||||||||||
Sbjct: 705 cctgacct-aaaagcgcgcccc 685
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 617 acgactagccgttccgtttcgccgtacttggt 586
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 652 gatacaactgcaacgacacgatgaccagagacac 619
>gb|BG649399.1|BG649399 EM1_78_H11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 466
Score = 654 bits (330), Expect = 0.0
Identities = 419/448 (93%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 1010 actcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggcttggccagcc 1069
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 466 actcgatgtcgatgatgccggagtggcggagctagtcgttgagtccgggcttggccagcc 407
Query: 1070 tgccgaacgcagtgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgt 1129
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgccgaacgccgtgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgt 347
Query: 1130 cggtgatgatcaccgtctccgtccgcccggagcaggacgggtccttcctgcaccgaatct 1189
| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct: 346 ccgtgatgatcaccgtctccgcccgcccggagcaggatctgtccttggtgcaccgaatct 287
Query: 1190 tgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcaggagccca 1249
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 286 tgtagcaggagccgcagcccttgccgtccttgaacaatggatggttgccgcaggacccca 227
Query: 1250 tggacatgaaggggtactggttggtgtgcttgaatccgcacgcgccaccgttgccgtcgg 1309
|||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 226 tggacatgaatgggtactggttggtgtgcttgaagccgcacgcgccaccgttgtcgtcgg 167
Query: 1310 ggccggcgccgttgggctggccgtaccaggtggcccgggccctctgccaggggccccagt 1369
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 166 ggccggcgccgttgggctggccgtaccaggtggcccgggccttctgccaggggccccagt 107
Query: 1370 acacggcggcgtcgctggcggtgtagttctccgtgccggtgccg---gcgtccgcggcgt 1426
|||||||||||||||||| | || ||||||||| ||||| |||| ||||||| ||||
Sbjct: 106 acacggcggcgtcgctggtgttgaagttctccgcgccggcgccggccgcgtccgtcgcgt 47
Query: 1427 cgagctgggcctctcggcactggcctcc 1454
||| ||||||||| ||||||| ||||||
Sbjct: 46 cgaactgggcctcccggcactcgcctcc 19
>gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 355
Score = 605 bits (305), Expect = e-171
Identities = 338/349 (96%)
Strand = Plus / Minus
Query: 866 tcttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccacca 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccacca 296
Query: 926 gcaccgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccg 985
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct: 295 gcaccgcgaagtagacggggttcgagtactcctccacgtggaaaccgatcttcagcccag 236
Query: 986 ggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgt 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgt 176
Query: 1046 cgttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtact 1105
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 175 cgttgaggccgggcttggccagcctgccgaacgccgtgccgctgaggtcgaagtggtact 116
Query: 1106 tggacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcagg 1165
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 115 tggacaccgggtagtagttcatgtccgtgatgatcaccgtctccgcccgcccggagcagg 56
Query: 1166 acgggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgcc 1214
| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 55 atctgtccttggtgcaccgaatcttgtagcaggagccgcagcccttgcc 7
>gb|BE359286.1|BE359286 DG1_40_D05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 559 bits (282), Expect = e-157
Identities = 381/412 (92%), Gaps = 9/412 (2%)
Strand = Plus / Minus
Query: 1082 tgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgtcggtgatgatca 1141
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 552 tgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgtccgtgatgatca 493
Query: 1142 ccgtctccgtccgcccggagcaggacgggtccttcctgcaccgaatcttgtagcaggagc 1201
||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 492 ccgtctccgcccgcccggagcaggatctgtccttggtgcaccgaatcttgtagcaggagc 433
Query: 1202 cgcagcccttgccgtccttgaacaatggctggttgccgcaggagcccatggacatgaagg 1261
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 432 cgcagcccttgccgtccttgaacaatggctggttgccgcaggaccccatggacatgaatg 373
Query: 1262 ggtactggttggtgtgcttgaatccgcacgcgccaccgttgccgtcggggccggcgccgt 1321
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 372 ggtactggttggtgtgcttgaagccgcacgcgccaccgttgtcgtcggggccggcgccgt 313
Query: 1322 tgggctggccgtaccaggtggcccgggccctctgccaggggccccagtacacggcggcgt 1381
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 312 tgggctggccgtaccaggtggcccgggccttctgccaggggccccagtacacggcggcgt 253
Query: 1382 cgctggcggtgtagttctccgtgccggtgccg---gcgtccgcggcgtcgagctgggcct 1438
|||||| | || ||||||||| ||||| |||| ||||||| ||||||| ||||||||
Sbjct: 252 cgctggtgttgaagttctccgcgccggcgccggccgcgtccgtcgcgtcgaactgggcct 193
Query: 1439 ctcggcactgg---cctccggcgagcagggccaggaggagcacgagcgccgc 1487
| ||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 192 cccggcactcgcctcctccggcgagcagggcc---aggagcacgagcgccgc 144
>gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782207, DNA
sequence
Length = 635
Score = 555 bits (280), Expect = e-156
Identities = 325/340 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 469 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 410
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 350
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 349 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 290
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 230
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 170
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctg 1005
||| ||||||||||| || |||||||||||||||||||||
Sbjct: 169 gaaaccgatcttcagcccagggaactcgcacggcaccctg 130
>gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11134865, DNA
sequence
Length = 589
Score = 555 bits (280), Expect = e-156
Identities = 325/340 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 505 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 446
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 386
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 385 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 326
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 266
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 206
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctg 1005
||| ||||||||||| || |||||||||||||||||||||
Sbjct: 205 gaaaccgatcttcagcccagggaactcgcacggcaccctg 166
>gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11134865, DNA
sequence
Length = 589
Score = 555 bits (280), Expect = e-156
Identities = 325/340 (95%)
Strand = Plus / Plus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 126 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 185
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 245
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 246 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 305
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 365
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 425
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctg 1005
||| ||||||||||| || |||||||||||||||||||||
Sbjct: 426 gaaaccgatcttcagcccagggaactcgcacggcaccctg 465
>gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100k14, DNA
sequence
Length = 672
Score = 555 bits (280), Expect = e-156
Identities = 325/340 (95%)
Strand = Plus / Plus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 13 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 72
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 132
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 133 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 192
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 252
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 312
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctg 1005
||| ||||||||||| || |||||||||||||||||||||
Sbjct: 313 gaaaccgatcttcagcccagggaactcgcacggcaccctg 352
>gb|BG241109.1|BG241109 OV1_38_C10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 547
Score = 549 bits (277), Expect = e-154
Identities = 376/407 (92%), Gaps = 9/407 (2%)
Strand = Plus / Minus
Query: 1087 ctgaggtcgaagtggtacttggacaccgggtagtagttcatgtcggtgatgatcaccgtc 1146
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 547 ctgaggtcgaagtggtacttggacaccgggtagtagttcatgtccgtgatgatcaccgtc 488
Query: 1147 tccgtccgcccggagcaggacgggtccttcctgcaccgaatcttgtagcaggagccgcag 1206
|||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 487 tccgcccgcccggagcaggatctgtccttggtgcaccgaatcttgtagcaggagccgcag 428
Query: 1207 cccttgccgtccttgaacaatggctggttgccgcaggagcccatggacatgaaggggtac 1266
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 427 cccttgccgtccttgaacaatggctggttgccgcaggaccccatggacatgaatgggtac 368
Query: 1267 tggttggtgtgcttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggc 1326
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 367 tggttggtgtgcttgaagccgcacgcgccaccgttgtcgtcggggccggcgccgttgggc 308
Query: 1327 tggccgtaccaggtggcccgggccctctgccaggggccccagtacacggcggcgtcgctg 1386
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 307 tggccgtaccaggtggcccgggccttctgccaggggccccagtacacggcggcgtcgctg 248
Query: 1387 gcggtgtagttctccgtgccggtgccg---gcgtccgcggcgtcgagctgggcctctcgg 1443
| | || ||||||||| ||||| |||| ||||||| ||||||| ||||||||| |||
Sbjct: 247 gtgttgaagttctccgcgccggcgccggccgcgtccgtcgcgtcgaactgggcctcccgg 188
Query: 1444 cactgg---cctccggcgagcagggccaggaggagcacgagcgccgc 1487
|||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 187 cactcgcctcctccggcgagcagggcc---aggagcacgagcgccgc 144
>gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515236, DNA
sequence
Length = 408
Score = 547 bits (276), Expect = e-153
Identities = 324/340 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 360 gtacgggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 301
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 241
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 240 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 181
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 121
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 61
Query: 966 gaacccgatcttcaggcccgggaactcgcacggcaccctg 1005
||| ||||||||||| || |||||||||||||||||||||
Sbjct: 60 gaaaccgatcttcagcccagggaactcgcacggcaccctg 21
>gb|CD228287.1|CD228287 CCC1_6_H09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_6_H09_A007 5', mRNA sequence
Length = 550
Score = 545 bits (275), Expect = e-153
Identities = 374/405 (92%), Gaps = 9/405 (2%)
Strand = Plus / Minus
Query: 1089 gaggtcgaagtggtacttggacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 550 gaggtcgaagtggtacttggacaccgggtagtagttcatgtccgtgatgatcaccgtctc 491
Query: 1149 cgtccgcccggagcaggacgggtccttcctgcaccgaatcttgtagcaggagccgcagcc 1208
|| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 490 cgcccgcccggagcaggatctgtccttggtgcaccgaatcttgtagcaggagccgcagcc 431
Query: 1209 cttgccgtccttgaacaatggctggttgccgcaggagcccatggacatgaaggggtactg 1268
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 430 cttgccgtccttgaacaatggctggttgccgcaggaccccatggacatgaatgggtactg 371
Query: 1269 gttggtgtgcttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctg 1328
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 370 gttggtgtgcttgaagccgcacgcgccaccgttgtcgtcggggccggcgccgttgggctg 311
Query: 1329 gccgtaccaggtggcccgggccctctgccaggggccccagtacacggcggcgtcgctggc 1388
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 310 gccgtaccaggtggcccgggccttctgccaggggccccagtacacggcggcgtcgctggt 251
Query: 1389 ggtgtagttctccgtgccggtgccg---gcgtccgcggcgtcgagctgggcctctcggca 1445
| || ||||||||| ||||| |||| ||||||| ||||||| ||||||||| |||||
Sbjct: 250 gttgaagttctccgcgccggcgccggccgcgtccgtcgcgtcgaactgggcctcccggca 191
Query: 1446 ctgg---cctccggcgagcagggccaggaggagcacgagcgccgc 1487
|| | |||||||||||||||||| |||||||||||||||||
Sbjct: 190 ctcgcctcctccggcgagcagggcc---aggagcacgagcgccgc 149
>gb|BG560466.1|BG560466 RHIZ2_74_G01.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 391
Score = 537 bits (271), Expect = e-150
Identities = 354/381 (92%), Gaps = 3/381 (0%)
Strand = Plus / Minus
Query: 1077 cgcagtgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgtcggtgat 1136
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 391 cgcagtgccgctgaggtcgaagtggtacttggacaccgggtagtagttcatgtccgtgat 332
Query: 1137 gatcaccgtctccgtccgcccggagcaggacgggtccttcctgcaccgaatcttgtagca 1196
|||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 331 gatcaccgtctccgcccgcccggagcaggatctgtccttggtgcaccgaatcttgtagca 272
Query: 1197 ggagccgcagcccttgccgtccttgaacaatggctggttgccgcaggagcccatggacat 1256
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 271 ggagccgcagcccttgccgtccttgaacaagggctggttgccgcaggaccccatggacat 212
Query: 1257 gaaggggtactggttggtgtgcttgaatccgcacgcgccaccgttgccgtcggggccggc 1316
||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 211 gaatgggtactggttggtgtgcttgaagccgcacgcgccaccgttgtcgtcggggccggc 152
Query: 1317 gccgttgggctggccgtaccaggtggcccgggccctctgccaggggccccagtacacggc 1376
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 151 gccgttgggctggccgtaccaggtggcccgggccttctgccaggggccccagtacacggc 92
Query: 1377 ggcgtcgctggcggtgtagttctccgtgccggtgc---cggcgtccgcggcgtcgagctg 1433
||||||||||| | || ||||||||| ||||| || ||||||||| ||||||| |||
Sbjct: 91 ggcgtcgctggtgttgaagttctccgcgccggcgccggcggcgtccgtcgcgtcgaactg 32
Query: 1434 ggcctctcggcactggcctcc 1454
||||| ||||||| ||||||
Sbjct: 31 agcctcccggcactcgcctcc 11
>gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 417
Score = 529 bits (267), Expect = e-148
Identities = 303/315 (96%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
Sbjct: 328 gtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgtttct 269
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 209
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 208 gtggttggtgtccatccgccagatggatccccaggactcgcgcatcggcgtccaacgccc 149
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 89
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 29
Query: 966 gaacccgatcttcag 980
||| |||||||||||
Sbjct: 28 gaaaccgatcttcag 14
>gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_52_B10_A007 3', mRNA sequence
Length = 656
Score = 517 bits (261), Expect = e-145
Identities = 300/313 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 313 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 254
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 194
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 193 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 134
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 74
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 14
Query: 966 gaacccgatcttc 978
||| |||||||||
Sbjct: 13 gaaaccgatcttc 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 56/63 (88%), Gaps = 5/63 (7%)
Strand = Plus / Minus
Query: 347 acatgccagcctgac---cccacaaaca-tcgcacacgacgcctgacctaaaaagcgcgc 402
|||||||||||| || |||||||||| ||||||| |||||||||||| ||||||||||
Sbjct: 641 acatgccagccttacagacccacaaacactcgcacatgacgcctgacct-aaaagcgcgc 583
Query: 403 ccc 405
|||
Sbjct: 582 ccc 580
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 512 acgactagccgttccgtttcgccgtacttggt 481
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 547 gatacaactgcaacgacacgatgaccagagacac 514
>gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_28_H10_A007 3', mRNA sequence
Length = 646
Score = 505 bits (255), Expect = e-141
Identities = 291/303 (96%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 303 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 244
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 184
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 183 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 124
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 64
Query: 906 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gccgtcctcgtactccaccagcaccgcgaagtagacggggttcgagtactcctccacgtg 4
Query: 966 gaa 968
|||
Sbjct: 3 gaa 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 56/63 (88%), Gaps = 5/63 (7%)
Strand = Plus / Minus
Query: 347 acatgccagcctgac---cccacaaaca-tcgcacacgacgcctgacctaaaaagcgcgc 402
|||||||||||| || |||||||||| ||||||| |||||||||||| ||||||||||
Sbjct: 631 acatgccagccttacagacccacaaacactcgcacatgacgcctgacct-aaaagcgcgc 573
Query: 403 ccc 405
|||
Sbjct: 572 ccc 570
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 502 acgactagccgttccgtttcgccgtacttggt 471
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 537 gatacaactgcaacgacacgatgaccagagacac 504
>gb|CN146641.1|CN146641 WOUND1_42_E05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_E05_A002 5', mRNA sequence
Length = 522
Score = 496 bits (250), Expect = e-138
Identities = 349/380 (91%), Gaps = 9/380 (2%)
Strand = Plus / Minus
Query: 1114 gggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggacgggtcc 1173
||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 522 gggtagtagttcatgtccgtgatgatcaccgtctccgcccgcccggagcaggatctgtcc 463
Query: 1174 ttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctgg 1233
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttggtgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctgg 403
Query: 1234 ttgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcg 1293
||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 402 ttgccgcaggaccccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcg 343
Query: 1294 ccaccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccctc 1353
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 342 ccaccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccttc 283
Query: 1354 tgccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgccg 1413
|||||||||||||||||||||||||||||||||| | || ||||||||| ||||| ||||
Sbjct: 282 tgccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccg 223
Query: 1414 ---gcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcgagcagggcc 1467
||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||
Sbjct: 222 gccgcgtccgtcgcgtcgaactgggcctcccggcactcgcctcctccggcgagcagggcc 163
Query: 1468 aggaggagcacgagcgccgc 1487
|||||||||||||||||
Sbjct: 162 ---aggagcacgagcgccgc 146
>gb|BG241855.1|BG241855 RHIZ2_51_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 520
Score = 486 bits (245), Expect = e-135
Identities = 353/387 (91%), Gaps = 9/387 (2%)
Strand = Plus / Minus
Query: 1107 ggacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcagga 1166
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 520 ggacaccgggtagtagttcatgtccgtgatgatcaccgtctccgcccgcccggagcagga 461
Query: 1167 cgggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaa 1226
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tctgtccttggtgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaa 401
Query: 1227 tggctggttgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaatcc 1286
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 400 gggctggttgccgcaggaccccatggacatgaatgggtactggttggtgtgcttgaagcc 341
Query: 1287 gcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggcccg 1346
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcacgcgccaccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggcccg 281
Query: 1347 ggccctctgccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtgcc 1406
|||| |||||||||||||||||||||||||||||||||||| | || ||||||||| |||
Sbjct: 280 ggccttctgccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcgcc 221
Query: 1407 ggtgc---cggcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcgag 1460
|| || ||||||||| ||||||| ||| ||||| ||||||| | ||||||||||
Sbjct: 220 ggcgccggcggcgtccgtcgcgtcgaactgagcctcccggcactcgcctcctccggcgaa 161
Query: 1461 cagggccaggaggagcacgagcgccgc 1487
|||||| ||||||||||||||||||
Sbjct: 160 cagggc---gaggagcacgagcgccgc 137
>gb|CN127336.1|CN127336 RHOH1_22_A01.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_22_A01_A002 5', mRNA sequence
Length = 783
Score = 454 bits (229), Expect = e-125
Identities = 344/379 (90%), Gaps = 10/379 (2%)
Strand = Plus / Minus
Query: 1116 gtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggacgg-gtcct 1174
||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||
Sbjct: 783 gtagtagttcatgtccgtgatgatcaccgtatccgcccgcccggagcaggattctgtcct 724
Query: 1175 tcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggt 1234
| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 723 tggtgcactgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatgactggt 664
Query: 1235 tgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcgc 1294
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 663 tgccgcaggaccccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcgc 604
Query: 1295 caccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccctct 1354
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 603 caccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccttct 544
Query: 1355 gccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgccg- 1413
||||||||||||||||||||||||||||||||| | || ||||||||| ||||| ||||
Sbjct: 543 gccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccgg 484
Query: 1414 --gcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcgagcagggcca 1468
||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||
Sbjct: 483 ccgcgtccgtcgcgtcgaactgggcctcccggcactcgcctcctccggcgagcagggcc- 425
Query: 1469 ggaggagcacgagcgccgc 1487
|||||||||||||||||
Sbjct: 424 --aggagcacgagcgccgc 408
>gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 442 bits (223), Expect = e-122
Identities = 259/271 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 271 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 212
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 152
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 151 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 92
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 32
Query: 906 gccgtcctcgtactccaccagcaccgcgaag 936
|||||||||||||||||||||||||||||||
Sbjct: 31 gccgtcctcgtactccaccagcaccgcgaag 1
>gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 652
Score = 440 bits (222), Expect = e-121
Identities = 255/266 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
Sbjct: 266 gtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgtttct 207
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 147
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 146 gtggttggtgtccatccgccagatggatccccaggactcgcgcatcggcgtccaacgccc 87
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 27
Query: 906 gccgtcctcgtactccaccagcaccg 931
||||||||||||||||||||||||||
Sbjct: 26 gccgtcctcgtactccaccagcaccg 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 56/63 (88%), Gaps = 5/63 (7%)
Strand = Plus / Minus
Query: 347 acatgccagcctgac---cccacaaaca-tcgcacacgacgcctgacctaaaaagcgcgc 402
|||||||||||| || |||||||||| ||||||| |||||||||||| ||||||||||
Sbjct: 596 acatgccagccttacagacccacaaacactcgcacatgacgcctgacct-aaaagcgcgc 538
Query: 403 ccc 405
|||
Sbjct: 537 ccc 535
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 467 acgactagccgttccgtttcgccgtacttggt 436
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 502 gatacaactgcaacgacacgatgaccagagacac 469
>gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_E05_A002 3', mRNA sequence
Length = 775
Score = 438 bits (221), Expect = e-121
Identities = 257/269 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 269 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 210
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 150
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 149 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 90
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 905
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcgccgtc 30
Query: 906 gccgtcctcgtactccaccagcaccgcga 934
|||||||||||||||||||||||||||||
Sbjct: 29 gccgtcctcgtactccaccagcaccgcga 1
Score = 119 bits (60), Expect = 8e-025
Identities = 118/134 (88%), Gaps = 10/134 (7%)
Strand = Plus / Minus
Query: 168 tacaatatacttttcgattaatcaccg----atcggaat---gaagatgatgatgatgat 220
||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||
Sbjct: 775 tacaatatacttttcgattaatcaccgatcgatcggatttaagaagaagatgatgatgat 716
Query: 221 a--aattataaaagcaacagtgggcgggagagcgtagcttgtacgcctgcctcctccatt 278
| ||||||||| |||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 715 ataaattataaa-gcaatatttggcgggagagcgtaccttgtacgcctgcctcctccatt 657
Query: 279 ttcccacacggctt 292
||||||||||||||
Sbjct: 656 ttcccacacggctt 643
Score = 54.0 bits (27), Expect = 4e-005
Identities = 77/88 (87%), Gaps = 8/88 (9%)
Strand = Plus / Minus
Query: 323 gcaatcagggtcacgcacggcatg-acatgccagcctgac---cccacaaaca-tcgcac 377
||||| |||||||||||| |||| |||||||||||| || |||||||||| ||||||
Sbjct: 620 gcaattagggtcacgcac--catgcacatgccagcctcacagacccacaaacactcgcac 563
Query: 378 acgacgcctgacctaaaaagcgcgcccc 405
| |||||||||||| |||||||||||||
Sbjct: 562 atgacgcctgacct-aaaagcgcgcccc 536
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 468 acgactagccgttccgtttcgccgtacttggt 437
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 503 gatacaactgcaacgacacgatgaccagagacac 470
>gb|BG412261.1|BG412261 OV2_39_G10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 447
Score = 414 bits (209), Expect = e-113
Identities = 287/311 (92%), Gaps = 9/311 (2%)
Strand = Plus / Minus
Query: 1183 cgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcag 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgcag 388
Query: 1243 gagcccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcgccaccgttg 1302
|| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 387 gaccccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcgccaccgttg 328
Query: 1303 ccgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccctctgccagggg 1362
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 327 tcgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccttctgccagggg 268
Query: 1363 ccccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgccg---gcgtcc 1419
||||||||||||||||||||||||| | || ||||||||| ||||| |||| ||||||
Sbjct: 267 ccccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccggccgcgtcc 208
Query: 1420 gcggcgtcgagctgggcctctcggcactgg---cctccggcgagcagggccaggaggagc 1476
| ||||||| ||||||||| ||||||| | |||||||||||||||||| ||||||
Sbjct: 207 gtcgcgtcgaactgggcctcccggcactcgcctcctccggcgagcagggcc---aggagc 151
Query: 1477 acgagcgccgc 1487
|||||||||||
Sbjct: 150 acgagcgccgc 140
>gb|BG465688.1|BG465688 RHIZ2_47_E04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 445
Score = 392 bits (198), Expect = e-107
Identities = 285/312 (91%), Gaps = 9/312 (2%)
Strand = Plus / Minus
Query: 1182 ccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgca 1241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 ccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaagggctggttgccgca 386
Query: 1242 ggagcccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcgccaccgtt 1301
||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 ggaccccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcgccaccgtt 326
Query: 1302 gccgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccctctgccaggg 1361
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 gtcgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccttctgccaggg 266
Query: 1362 gccccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgc---cggcgtc 1418
|||||||||||||||||||||||||| | || ||||||||| ||||| || |||||||
Sbjct: 265 gccccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccggcggcgtc 206
Query: 1419 cgcggcgtcgagctgggcctctcggcactgg---cctccggcgagcagggccaggaggag 1475
|| ||||||| ||| ||||| ||||||| | |||||||||| |||||| ||||||
Sbjct: 205 cgtcgcgtcgaactgagcctcccggcactcgcctcctccggcgaacagggc---gaggag 149
Query: 1476 cacgagcgccgc 1487
||||||||||||
Sbjct: 148 cacgagcgccgc 137
>gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f075a01, DNA
sequence
Length = 477
Score = 371 bits (187), Expect = e-100
Identities = 223/235 (94%)
Strand = Plus / Plus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 241 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 300
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 360
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 361 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 420
Query: 846 cgtcggcgggccgcgcgccgtcttggactccatcaggtccacctgcaccacgtcg 900
|||||| || ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtcgggggcccgtgcgccgtcttggactccatcaggtccacctgcaccacgtcg 475
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 42 acgactagccgttccgtttcgccgtacttggt 73
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 7 gatacaactgcaacgacacgatgaccagagacac 40
>gb|BE361499.1|BE361499 DG1_81_B09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 321 bits (162), Expect = 1e-085
Identities = 183/190 (96%)
Strand = Plus / Minus
Query: 816 ccaggactcgcgcatcggcgtccaccgccccgtcggcgggccgcgcgccgtcttggactc 875
||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||
Sbjct: 546 ccaggactcgcgcatgggcgtccaccgccccgtcgggggcccgtgcgccgtcttggactc 487
Query: 876 catcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgcgaa 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 catcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgcgaa 427
Query: 936 gtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccgggaactcgca 995
||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 426 gtagacggggttcgagtactcctccacgtggaaaccgatcttcagcccagggaactcgca 367
Query: 996 cggcaccctg 1005
||||||||||
Sbjct: 366 cggcaccctg 357
>gb|BG158305.1|BG158305 EM1_11_H06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 502
Score = 311 bits (157), Expect = 1e-082
Identities = 237/262 (90%), Gaps = 9/262 (3%)
Strand = Plus / Minus
Query: 1232 ggttgccgcaggagcccatggacatgaaggggtactggttggtgtgcttgaatccgcacg 1291
||||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||||||
Sbjct: 502 ggttgccgcaggaccccatgnacatgaatgggtactggttggtgtgcttgaagccgcacg 443
Query: 1292 cgccaccgttgccgtcggggccggcgccgttgggctggccgtaccaggtggcccgggccc 1351
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cgccaccgttgtcgtcggggccggcgccgttgggctggccgtaccaggtggcccgggcct 383
Query: 1352 tctgccaggggccccagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgc 1411
|||||||||||||||||||||||||||||||||||| | || ||||||||| ||||| ||
Sbjct: 382 tctgccaggggccccagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgc 323
Query: 1412 cg---gcgtccgcggcgtcgagctgggcctctcggcactgg---cctccggcgagcaggg 1465
|| ||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||
Sbjct: 322 cggccgcgtccgtcgcgtcgaactgggcctcccggcactcgcctcctccggcgagcaggg 263
Query: 1466 ccaggaggagcacgagcgccgc 1487
|| |||||||||||||||||
Sbjct: 262 cc---aggagcacgagcgccgc 244
>gb|CW407264.1|CW407264 fsbb001f100k14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f100k14, DNA
sequence
Length = 752
Score = 309 bits (156), Expect = 4e-082
Identities = 180/188 (95%)
Strand = Plus / Minus
Query: 1002 cctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggctt 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggctt 428
Query: 1062 ggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttggacaccgggtagta 1121
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggccagcctgccgaacgccgtgccgctgaggtcgaagtggtacttggacaccgggtagta 368
Query: 1122 gttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggacgggtccttcctgca 1181
||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 367 gttcatgtccgtgatgatcaccgtctccgcccgcccggagcaggatctgtccttggtgca 308
Query: 1182 ccgaatct 1189
||||||||
Sbjct: 307 ccgaatct 300
>gb|BI351436.1|BI351436 IP1_71_F01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 393
Score = 297 bits (150), Expect = 2e-078
Identities = 225/248 (90%), Gaps = 9/248 (3%)
Strand = Plus / Minus
Query: 1246 cccatggacatgaaggggtactggttggtgtgcttgaatccgcacgcgccaccgttgccg 1305
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 390 cccatggacatgaatgggtactggttggtgtgcttgaagccgcacgcgccaccgttgtcg 331
Query: 1306 tcggggccggcgccgttgggctggccgtaccaggtggcccgggccctctgccaggggccc 1365
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 330 tcggggccggcgccgttgggctggccgtaccaggtggcccgggccttctgccaggggccc 271
Query: 1366 cagtacacggcggcgtcgctggcggtgtagttctccgtgccggtgccg---gcgtccgcg 1422
|||||||||||||||||||||| | || ||||||||| ||||| |||| |||||||
Sbjct: 270 cagtacacggcggcgtcgctggtgttgaagttctccgcgccggcgccggccgcgtccgtc 211
Query: 1423 gcgtcgagctgggcctctcggcactgg---cctccggcgagcagggccaggaggagcacg 1479
||||||| ||||||||| ||||||| | |||||||||||||||||| |||||||||
Sbjct: 210 gcgtcgaactgggcctcccggcactcgcctcctccggcgagcagggcc---aggagcacg 154
Query: 1480 agcgccgc 1487
||||||||
Sbjct: 153 agcgccgc 146
>gb|BF421073.1|BF421073 FM1_6_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 485
Score = 295 bits (149), Expect = 6e-078
Identities = 175/184 (95%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
Sbjct: 188 gtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgtttct 129
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 69
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||| |||||||||||||||||||| |||||
Sbjct: 68 gtggttggtgtccatccgccagatggatccccangactcgcgcatcggcgtccaacgccc 9
Query: 846 cgtc 849
||||
Sbjct: 8 cgtc 5
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 389 acgactagccgttccgtttcgccgtacttggt 358
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 424 gatacaactgcaacgacacgatgaccagagacac 391
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 287 bits (145), Expect = 2e-075
Identities = 247/281 (87%)
Strand = Plus / Plus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 489 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 548
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | ||||||
Sbjct: 549 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgccccggg 608
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 609 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 668
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 669 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 728
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 729 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 769
Score = 109 bits (55), Expect = 8e-022
Identities = 147/175 (84%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 667 tactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgttg 726
|||||||||| ||| |||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 306 tactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgacttggttc 365
Query: 727 gcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcg-gctgcatgcg 785
|| || ||||||||||||||||||||| |||||| | |||||| |||| | || | |||
Sbjct: 366 gccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtg-aggcg 424
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccac 840
|||| || ||||| | ||||| ||| |||||||||||||||||||||||||||
Sbjct: 425 gtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccac 479
>gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_18_C01_A002 5', mRNA sequence
Length = 821
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 683 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 624
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 623 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 564
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 563 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 504
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 503 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 444
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 443 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 384
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 383 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 324
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 323 ggctgattgccgca 310
Score = 60.0 bits (30), Expect = 7e-007
Identities = 95/117 (81%)
Strand = Plus / Minus
Query: 723 gttggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcat 782
|||||| || ||| || ||||||||||||| |||||| | |||||||||| |||||
Sbjct: 810 gttggccaccagcttcctgccggactcgtttgtgatgcgcagcgagaagggcgcctgcag 751
Query: 783 gcggtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtcca 839
| ||||||| ||||| | ||||| ||| || |||||||||||||||||||||||
Sbjct: 750 cctatggttggcgtccagcctccagatggatccncaggactcgcgcatcggcgtcca 694
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 273 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 214
Query: 1338 ggtggc 1343
||||||
Sbjct: 213 ggtggc 208
>gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_35_B11_A002 5', mRNA sequence
Length = 836
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 687 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 628
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 627 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 568
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 567 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 508
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 507 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 448
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 447 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 388
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 387 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 328
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 327 ggctgattgccgca 314
Score = 75.8 bits (38), Expect = 1e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
||||||||| |||||||| |||||| || ||| || ||||||||||||| ||||||
Sbjct: 835 ccagttggctgggatgacccggttggccaccagcttcctgccggactcgtttgtgatgcg 776
Query: 762 gatggagaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccagga 821
| |||||||||| ||||| | ||||||| ||||| | ||||| ||| ||||||||
Sbjct: 775 cagcgagaagggcgcctgcagcctatggttggcgtccagcctccagatggatccccagga 716
Query: 822 ctcgcgcatcggcgtcca 839
||||||||||||||||||
Sbjct: 715 ctcgcgcatcggcgtcca 698
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 277 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 218
Query: 1338 ggtggc 1343
||||||
Sbjct: 217 ggtggc 212
>gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_46_G08_A002 5', mRNA sequence
Length = 889
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 686 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 627
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 626 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 567
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 566 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 507
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 506 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 447
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 446 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 387
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 386 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 327
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 326 ggctgattgccgca 313
Score = 69.9 bits (35), Expect = 7e-010
Identities = 112/138 (81%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
||||||||| |||||||| |||||| || ||| || ||||||||||||| ||||||
Sbjct: 834 ccagttggctgggatgacccggttggccaccagcttcctgccggactcgtttgtgatgcg 775
Query: 762 gatggagaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccagga 821
| |||||||||| ||||| | ||||||| ||||| | ||||| ||| || |||||
Sbjct: 774 cagcgagaagggcgcctgcagcctatggttggcgtccagcctccagatggatccncagga 715
Query: 822 ctcgcgcatcggcgtcca 839
||||||||||||||||||
Sbjct: 714 ctcgcgcatcggcgtcca 697
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 276 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 217
Query: 1338 ggtggc 1343
||||||
Sbjct: 216 ggtggc 211
>gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 5', mRNA sequence
Length = 736
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 680 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 621
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 620 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 561
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 560 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 501
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 500 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 441
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 440 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 381
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 380 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 321
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 320 ggctgattgccgca 307
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 270 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 211
Query: 1338 ggtggc 1343
||||||
Sbjct: 210 ggtggc 205
Score = 50.1 bits (25), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 804 ccagacggagccccaggactcgcgcatcggcgtcca 839
||||| ||| || |||||||||||||||||||||||
Sbjct: 726 ccagatggatccncaggactcgcgcatcggcgtcca 691
>gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 5', mRNA sequence
Length = 771
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 687 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 628
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 627 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 568
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 567 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 508
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 507 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 448
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 447 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 388
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 387 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 328
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 327 ggctgattgccgca 314
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 277 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 218
Query: 1338 ggtggc 1343
||||||
Sbjct: 217 ggtggc 212
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 766 gagaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccaggactcg 825
|||||||||| ||||| | ||||||| ||||| | ||||| ||| || |||||||||
Sbjct: 771 gagaagggcgcctgcagcctatggttggcgtccagcctccagatggatccgcaggactcg 712
Query: 826 cgcatcggcgtcca 839
||||||||||||||
Sbjct: 711 cgcatcggcgtcca 698
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 281 bits (142), Expect = 1e-073
Identities = 316/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 378 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 319
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 318 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 259
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 258 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 199
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 198 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 139
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 138 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 79
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 78 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 19
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 18 ggctgattgccgca 5
Score = 75.8 bits (38), Expect = 1e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
||||||||| |||||||| |||||| || ||| || ||||||||||||| ||||||
Sbjct: 526 ccagttggctgggatgacccggttggccaccagcttcctgccggactcgtttgtgatgcg 467
Query: 762 gatggagaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccagga 821
| |||||||||| ||||| | ||||||| ||||| | ||||| ||| ||||||||
Sbjct: 466 cagcgagaagggcgcctgcagcctatggttggcgtccagcctccagatggatccccagga 407
Query: 822 ctcgcgcatcggcgtcca 839
||||||||||||||||||
Sbjct: 406 ctcgcgcatcggcgtcca 389
>gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_E10_A007 3', mRNA sequence
Length = 635
Score = 280 bits (141), Expect = 4e-073
Identities = 171/181 (94%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |
Sbjct: 181 gtactggacgaaggagcggtagaaagtgttgggcctccagttggccgggatgacgtttct 122
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcggctgcatgcg 785
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgacgagcgtcttgccggactctttgcggatgcggatggagaagggcggctgcatgcg 62
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccaccgccc 845
||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||
Sbjct: 61 gtggttggtgtccatccgccagatggatccccaggactcgcgcatgggcgtccaccgccc 2
Query: 846 c 846
|
Sbjct: 1 c 1
Score = 117 bits (59), Expect = 3e-024
Identities = 79/83 (95%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 210 atgatgatgataaattataaaagcaacagtgggcgggagagcgtagcttgtacgcctgcc 269
|||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct: 635 atgatgat-ataaattataaa-gcaatagtgggcgggagagcgtaccttgtacgcctgcc 578
Query: 270 tcctccattttcccacacggctt 292
|||||||||||||||||||||||
Sbjct: 577 tcctccattttcccacacggctt 555
Score = 54.0 bits (27), Expect = 4e-005
Identities = 77/88 (87%), Gaps = 8/88 (9%)
Strand = Plus / Minus
Query: 323 gcaatcagggtcacgcacggcatg-acatgccagcctgac---cccacaaaca-tcgcac 377
||||| |||||||||||| |||| |||||||||||| || |||||||||| ||||||
Sbjct: 532 gcaattagggtcacgcac--catgcacatgccagccttacagacccacaaacactcgcac 475
Query: 378 acgacgcctgacctaaaaagcgcgcccc 405
| |||||||||||| |||||||||||||
Sbjct: 474 atgacgcctgacct-aaaagcgcgcccc 448
Score = 48.1 bits (24), Expect = 0.003
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 493 acgactagctgttccgttccgccgtacttggt 524
||||||||| |||||||| |||||||||||||
Sbjct: 380 acgactagccgttccgtttcgccgtacttggt 349
Score = 44.1 bits (22), Expect = 0.040
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 436 gatacaactgcaacggcacggtgaccggagacac 469
||||||||||||||| |||| ||||| |||||||
Sbjct: 415 gatacaactgcaacgacacgatgaccagagacac 382
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 280 bits (141), Expect = 4e-073
Identities = 246/281 (87%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 329 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 270
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | || |||
Sbjct: 269 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgcccgggg 210
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 209 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 150
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 149 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 90
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 89 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 49
Score = 111 bits (56), Expect = 2e-022
Identities = 148/176 (84%), Gaps = 2/176 (1%)
Strand = Plus / Minus
Query: 666 gtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgtt 725
||||||||||| ||| |||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 513 gtactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgacttggtt 454
Query: 726 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcg-gctgcatgc 784
|| || ||||||||||||||||||||| |||||| | |||||| |||| | || | ||
Sbjct: 453 cgccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtg-aggc 395
Query: 785 ggtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccac 840
||||| || ||||| | ||||| ||| |||||||||||||||||||||||||||
Sbjct: 394 ggtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccac 339
>gb|CW463846.1|CW463846 fsbb001f212l24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f212l24, DNA
sequence
Length = 623
Score = 276 bits (139), Expect = 6e-072
Identities = 162/167 (97%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 1002 cctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggctt 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcgttgaggccgggctt 426
Query: 1062 ggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttggaca-ccgggtagt 1120
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 427 ggccagcctgccgaacgccgtgccgctgaggtcgaagtggtacttggacacccgggtagt 486
Query: 1121 agttcatgtcggtgatgatcaccgtctccgtccg-cccggagcagga 1166
|||||||||| ||||||||||||||||||| ||| ||||||||||||
Sbjct: 487 agttcatgtccgtgatgatcaccgtctccgcccgccccggagcagga 533
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 274 bits (138), Expect = 2e-071
Identities = 303/358 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||||||||||||| ||| |||| || |||
Sbjct: 370 ttggcctccatgatgtccacctgcaccacgtcgccgtcgccgtcttcgaactcgacgagc 311
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 310 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 251
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 250 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 191
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 190 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 131
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 130 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 71
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaaca 1225
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 70 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaaca 13
Score = 75.8 bits (38), Expect = 1e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
||||||||| |||||||| |||||| || ||| || ||||||||||||| ||||||
Sbjct: 518 ccagttggctgggatgacccggttggccaccagcttcctgccggactcgtttgtgatgcg 459
Query: 762 gatggagaagggcggctgcatgcggtggttggtgtccatgcgccagacggagccccagga 821
| |||||||||| ||||| | ||||||| ||||| | ||||| ||| ||||||||
Sbjct: 458 cagcgagaagggcgcctgcagcctatggttggcgtccagcctccagatggatccccagga 399
Query: 822 ctcgcgcatcggcgtcca 839
||||||||||||||||||
Sbjct: 398 ctcgcgcatcggcgtcca 381
>gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 5', mRNA sequence
Length = 743
Score = 274 bits (138), Expect = 2e-071
Identities = 315/374 (84%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||||||||| ||||||||| ||| |||| || |||
Sbjct: 681 ttggcctccatgatgtccacctgcaccacgtcgcagtcgccgtcttcgaactcgacgagc 622
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 621 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 562
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 561 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 502
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 501 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 442
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 441 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 382
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 381 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 322
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 321 ggctgattgccgca 308
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 271 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 212
Query: 1338 ggtggc 1343
||||||
Sbjct: 211 ggtggc 206
Score = 56.0 bits (28), Expect = 1e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 804 ccagacggagccccaggactcgcgcatcggcgtcca 839
||||| ||| ||||||||||||||||||||||||||
Sbjct: 727 ccagatggatccccaggactcgcgcatcggcgtcca 692
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 272 bits (137), Expect = 9e-071
Identities = 245/281 (87%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| | || || |||
Sbjct: 306 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaattcgacgagc 247
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | || |||
Sbjct: 246 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgcccgggg 187
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 186 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 127
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 126 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 67
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 66 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 26
Score = 79.8 bits (40), Expect = 7e-013
Identities = 117/140 (83%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
|||||||||| ||||||| | ||| || || ||||||||||||||||||||| ||||||
Sbjct: 454 ccagttggcccggatgacttggttcgccaccagcgtcttgccggactcgttggtgatgcg 395
Query: 762 gatggagaagggcg-gctgcatgcggtggttggtgtccatgcgccagacggagccccagg 820
| |||||| |||| | || | ||||||| || ||||| | ||||| ||| |||||||
Sbjct: 394 cagggagaacggcgcggtg-aggcggtggccggagtccagcctccagatggatccccagg 336
Query: 821 actcgcgcatcggcgtccac 840
||||||||||||||||||||
Sbjct: 335 actcgcgcatcggcgtccac 316
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 272 bits (137), Expect = 9e-071
Identities = 245/281 (87%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| | || || |||
Sbjct: 370 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaattcgacgagc 311
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | || |||
Sbjct: 310 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgcccgggg 251
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 250 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 191
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 190 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 131
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 130 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 90
Score = 109 bits (55), Expect = 8e-022
Identities = 147/175 (84%), Gaps = 2/175 (1%)
Strand = Plus / Minus
Query: 667 tactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgttg 726
|||||||||| ||| |||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 553 tactggacgatggaacggtagtaggtgttgggcacccagttggccgggatgacttggttc 494
Query: 727 gcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggcg-gctgcatgcg 785
|| || ||||||||||||||||||||| |||||| | |||||| |||| | || | |||
Sbjct: 493 gccaccagcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtg-aggcg 435
Query: 786 gtggttggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccac 840
|||| || ||||| | ||||| ||| |||||||||||||||||||||||||||
Sbjct: 434 gtggccggagtccagcctccagatggatccccaggactcgcgcatcggcgtccac 380
Score = 79.8 bits (40), Expect = 7e-013
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1186 atcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgc 1237
|||| |||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 52 atctggtagcaggagccgcagcccttgccgtccttgaacaagggctcgttgc 1
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 272 bits (137), Expect = 9e-071
Identities = 245/281 (87%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| | || || |||
Sbjct: 500 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaattcgacgagc 441
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | || |||
Sbjct: 440 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgcccgggg 381
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 380 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 321
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 320 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 261
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 260 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 220
Score = 97.6 bits (49), Expect = 3e-018
Identities = 141/169 (83%), Gaps = 2/169 (1%)
Strand = Plus / Minus
Query: 673 acgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgttgttggcgacg 732
|||| ||| |||||| |||||||||| |||||||||||||||||| | ||| || ||
Sbjct: 677 acgatggaacggtagtaggtgttgggcacccagttggccgggatgacttggttcgccacc 618
Query: 733 agcgtcttgccggactcgttgcggatgcggatggagaagggcg-gctgcatgcggtggtt 791
||||||||||||||||||||| |||||| | |||||| |||| | || | |||||||
Sbjct: 617 agcgtcttgccggactcgttggtgatgcgcagggagaacggcgcggtg-aggcggtggcc 559
Query: 792 ggtgtccatgcgccagacggagccccaggactcgcgcatcggcgtccac 840
|| ||||| | ||||| ||| |||||||||||||||||||||||||||
Sbjct: 558 ggagtccagcctccagatggatccccaggactcgcgcatcggcgtccac 510
Score = 87.7 bits (44), Expect = 3e-015
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1186 atcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgca 1241
|||| |||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 182 atctggtagcaggagccgcagcccttgccgtccttgaacaagggctcgttgccgca 127
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 272 bits (137), Expect = 9e-071
Identities = 245/281 (87%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| |||||||||||||||||||||||||||||||| ||| | || || |||
Sbjct: 661 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcttcgaattcgacgagc 602
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||||||||| ||| |||||||||||||||| | |||| | || |||
Sbjct: 601 accgcgaagtagacggggttggagccctcctccacgtggaacgtcaccttctgcccgggg 542
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| |||||||| |||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 541 tagttgcagggcaccctcttgaactggatgtcgatgatgccggcgtggcggagctcgtcg 482
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
|| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 481 ctgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 422
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctc 1148
||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 421 gacacggggtagtagttcatgtcagtgatgatcaccgtctc 381
Score = 87.7 bits (44), Expect = 3e-015
Identities = 118/140 (84%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 702 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 761
|||||||||||||||||| | ||| || || ||||||||||||||||||||| ||||||
Sbjct: 809 ccagttggccgggatgacttggttcgccaccagcgtcttgccggactcgttggtgatgcg 750
Query: 762 gatggagaagggcg-gctgcatgcggtggttggtgtccatgcgccagacggagccccagg 820
| |||||| |||| | || | ||||||| || ||||| | ||||| ||| |||||||
Sbjct: 749 cagggagaacggcgcggtg-aggcggtggccggagtccagcctccagatggatccccagg 691
Query: 821 actcgcgcatcggcgtccac 840
||||||||||||||||||||
Sbjct: 690 actcgcgcatcggcgtccac 671
Score = 87.7 bits (44), Expect = 3e-015
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 1186 atcttgtagcaggagccgcagcccttgccgtccttgaacaatggctggttgccgca 1241
|||| |||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 343 atctggtagcaggagccgcagcccttgccgtccttgaacaagggctcgttgccgca 288
Score = 48.1 bits (24), Expect = 0.003
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
||||||||| || |||||||||| | | || |||||||||||| ||||| ||||||||
Sbjct: 251 cttgaatccacaggcgccaccgtcgtcatcagggccggcgccggtgggcgcaccgtacca 192
Query: 1338 ggtggccc 1345
||| ||||
Sbjct: 191 ggttgccc 184
>gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_38_E01_A002 5', mRNA sequence
Length = 714
Score = 266 bits (134), Expect = 6e-069
Identities = 314/374 (83%)
Strand = Plus / Minus
Query: 868 ttggactccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagc 927
|||| |||||| | |||||||||||||| ||||| ||||||||| ||| |||| || |||
Sbjct: 668 ttggcctccatgatgtccacctgcaccaagtcgctgtcgccgtcttcgaactcgacgagc 609
Query: 928 accgcgaagtagacggggttcgagtactcctccacgtggaacccgatcttcaggcccggg 987
|||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||
Sbjct: 608 accgcgaagtagaccgggttcgagccctcctccacgtggaacgtcaccttctgccccggg 549
Query: 988 aactcgcacggcaccctggtgaactcgatgtcgatgatgccggagtggcggagcttgtcg 1047
| | ||| ||||| || |||||| ||||||||||||||||| ||||||||||| || |
Sbjct: 548 tagttgcagggcactctcttgaactggatgtcgatgatgccggcgtggcggagctcgttg 489
Query: 1048 ttgaggccgggcttggccagcctgccgaacgcagtgccgctgaggtcgaagtggtacttg 1107
||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 488 ttgcggccgggcttggccatggcgccgaacgccgtgccgctgaggtcgaagtgatacttg 429
Query: 1108 gacaccgggtagtagttcatgtcggtgatgatcaccgtctccgtccgcccggagcaggac 1167
||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct: 428 gacacggggtagtagttcatgtcagtgatgatcaccgtctcggggttgccggagcaggca 369
Query: 1168 gggtccttcctgcaccgaatcttgtagcaggagccgcagcccttgccgtccttgaacaat 1227
|||| ||| |||||| |||| |||||||||||| || ||||| || || |||||||
Sbjct: 368 gggtgtttctggcaccgtatctggtagcaggagccacatccctttccatctttgaacagg 309
Query: 1228 ggctggttgccgca 1241
||||| ||||||||
Sbjct: 308 ggctgattgccgca 295
Score = 60.0 bits (30), Expect = 7e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1278 cttgaatccgcacgcgccaccgttgccgtcggggccggcgccgttgggctggccgtacca 1337
|||||| ||||| |||||||| ||| |||| |||||||||||| ||||| ||||||||
Sbjct: 258 cttgaacccgcaggcgccaccattgtcgtcagggccggcgccggtgggcgcaccgtacca 199
Query: 1338 ggtggc 1343
||||||
Sbjct: 198 ggtggc 193
Score = 48.1 bits (24), Expect = 0.003
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 804 ccagacggagccccaggactcgcgcatcggcgtcca 839
||||| ||| || |||||||||||||||||||||||
Sbjct: 714 ccagatggatcctcaggactcgcgcatcggcgtcca 679
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 533,205
Number of Sequences: 832831
Number of extensions: 533205
Number of successful extensions: 169494
Number of sequences better than 0.5: 726
Number of HSP's better than 0.5 without gapping: 725
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 166517
Number of HSP's gapped (non-prelim): 2676
length of query: 1600
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1580
effective length of database: 474,703,049
effective search space: 750030817420
effective search space used: 750030817420
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)