BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418879.2.1
(1083 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN551925.1|DN551925 pSPR-RT-MR-H2_F08_C293 pSPR Sorghum ... 1080 0.0
gb|CW274729.1|CW274729 104_747_11404582_116_35375_083 Sorgh... 979 0.0
gb|BG158422.1|BG158422 FM1_60_C08.b1_A003 Floral-Induced Me... 831 0.0
gb|BG103894.1|BG103894 RHIZ2_38_H12.b1_A003 Rhizome2 (RHIZ2... 654 0.0
gb|BF705362.1|BF705362 RHIZ2_3_A11.b1_A003 Rhizome2 (RHIZ2)... 569 e-160
gb|BG047981.1|BG047981 OV1_26_B09.g1_A002 Ovary 1 (OV1) Sor... 569 e-160
gb|BG051778.1|BG051778 FM1_58_C08.b1_A003 Floral-Induced Me... 545 e-153
gb|BE125314.1|BE125314 DG1_19_B11.b1_A002 Dark Grown 1 (DG1... 515 e-144
gb|BF588452.1|BF588452 FM1_36_G10.g1_A003 Floral-Induced Me... 513 e-143
gb|BE125541.1|BE125541 DG1_27_B11.b1_A002 Dark Grown 1 (DG1... 484 e-135
gb|BE357999.1|BE357999 DG1_23_E04.g1_A002 Dark Grown 1 (DG1... 462 e-128
gb|CW260857.1|CW260857 104_727_11229193_116_35197_003 Sorgh... 456 e-126
gb|BG054129.1|BG054129 OV2_1_E11.b1_A002 Ovary 2 (OV2) Sorg... 450 e-124
gb|DN551707.1|DN551707 pSPR-L_F08_C224 pSPR Sorghum propinq... 422 e-116
gb|DN552332.1|DN552332 pSPR-RT-A-H2_D12_C224 pSPR Sorghum p... 422 e-116
gb|CN136320.1|CN136320 OX1_42_F05.b1_A002 Oxidatively-stres... 414 e-114
gb|BF421124.1|BF421124 FM1_6_F09.g1_A003 Floral-Induced Mer... 408 e-112
gb|CN137899.1|CN137899 OX1_60_A05.g1_A002 Oxidatively-stres... 408 e-112
gb|CX611404.1|CX611404 ANR1_24_A11.g1_A002 Anaerobic roots ... 408 e-112
gb|BF705281.1|BF705281 RHIZ2_3_A11.g1_A003 Rhizome2 (RHIZ2)... 406 e-111
gb|BG103632.1|BG103632 RHIZ2_38_H12.g1_A003 Rhizome2 (RHIZ2... 404 e-111
gb|BF588420.1|BF588420 FM1_36_D10.g1_A003 Floral-Induced Me... 396 e-108
gb|BM323774.1|BM323774 PIC1_23_C05.b1_A002 Pathogen-infecte... 391 e-106
gb|AW565869.1|AW565869 LG1_352_G11.g1_A002 Light Grown 1 (L... 389 e-106
gb|BE362016.1|BE362016 DG1_83_F11.g1_A002 Dark Grown 1 (DG1... 389 e-106
gb|BF587600.1|BF587600 FM1_38_D12.g1_A003 Floral-Induced Me... 389 e-106
gb|BG464622.1|BG464622 EM1_72_A05.g1_A002 Embryo 1 (EM1) So... 389 e-106
gb|BI351060.1|BI351060 IP1_69_C12.g1_A002 Immature pannicle... 389 e-106
gb|BE363728.1|BE363728 WS1_69_D09.g2_A002 Water-stressed 1 ... 387 e-105
gb|BE595755.1|BE595755 PI1_54_E02.g1_A002 Pathogen induced ... 383 e-104
gb|BG051706.1|BG051706 FM1_60_C08.g1_A003 Floral-Induced Me... 383 e-104
gb|BG487885.1|BG487885 RHIZ2_60_E11.g1_A003 Rhizome2 (RHIZ2... 383 e-104
gb|BG488037.1|BG488037 RHIZ2_62_D10.g1_A003 Rhizome2 (RHIZ2... 383 e-104
gb|BG488043.1|BG488043 RHIZ2_62_E07.g1_A003 Rhizome2 (RHIZ2... 383 e-104
gb|BG488044.1|BG488044 RHIZ2_62_E08.g1_A003 Rhizome2 (RHIZ2... 383 e-104
gb|BG241448.1|BG241448 RHIZ2_49_C09.g1_A003 Rhizome2 (RHIZ2... 381 e-103
gb|CN146878.1|CN146878 WOUND1_44_H11.b1_A002 Wounded leaves... 379 e-103
gb|AW924448.1|AW924448 WS1_69_D09.g1_A002 Water-stressed 1 ... 377 e-102
gb|BE361348.1|BE361348 DG1_71_C10.g1_A002 Dark Grown 1 (DG1... 377 e-102
gb|BG948232.1|BG948232 IP1_10_H10.g1_A002 Immature pannicle... 375 e-102
gb|BE359096.1|BE359096 DG1_38_G05.g1_A002 Dark Grown 1 (DG1... 373 e-101
gb|BG049734.1|BG049734 EM1_8_E10.g1_A002 Embryo 1 (EM1) Sor... 373 e-101
gb|BG054111.1|BG054111 OV2_3_F05.g1_A002 Ovary 2 (OV2) Sorg... 369 e-100
gb|BG054036.1|BG054036 OV2_1_E11.g1_A002 Ovary 2 (OV2) Sorg... 367 1e-099
gb|BG357443.1|BG357443 OV2_29_H10.g1_A002 Ovary 2 (OV2) Sor... 367 1e-099
gb|CW792371.1|CW792371 SP__Ba0092B22.r SP__Ba Sorghum propi... 359 3e-097
gb|BG412489.1|BG412489 OV2_35_A01.g1_A002 Ovary 2 (OV2) Sor... 359 3e-097
gb|AW922487.1|AW922487 DG1_19_B11.g1_A002 Dark Grown 1 (DG1... 353 2e-095
gb|BG049985.1|BG049985 FM1_68_H11.g1_A003 Floral-Induced Me... 353 2e-095
gb|BI140366.1|BI140366 IP1_52_D12.g1_A002 Immature pannicle... 351 9e-095
gb|CX612409.1|CX612409 GABR1_2_F11.b1_A002 GA- or brassinol... 345 5e-093
gb|CX613264.1|CX613264 GABR1_7_E06.b1_A002 GA- or brassinol... 345 5e-093
gb|BG560104.1|BG560104 RHIZ2_69_D09.b1_A003 Rhizome2 (RHIZ2... 341 8e-092
gb|CX606273.1|CX606273 ANR1_2_D02.b1_A002 Anaerobic roots S... 337 1e-090
gb|CX607160.1|CX607160 ANR1_7_B10.b1_A002 Anaerobic roots S... 333 2e-089
gb|BG051581.1|BG051581 FM1_58_C08.g1_A003 Floral-Induced Me... 329 3e-088
gb|BG357348.1|BG357348 OV2_12_G04.b1_A002 Ovary 2 (OV2) Sor... 329 3e-088
gb|BG102034.1|BG102034 RHIZ2_24_A08.g1_A003 Rhizome2 (RHIZ2... 327 1e-087
gb|BG102692.1|BG102692 RHIZ2_36_B05.g1_A003 Rhizome2 (RHIZ2... 327 1e-087
gb|CN128207.1|CN128207 RHOH1_27_F10.g1_A002 Acid- and alkal... 325 5e-087
gb|BF481280.1|BF481280 FM1_18_A01.g1_A003 Floral-Induced Me... 315 5e-084
gb|AW745094.1|AW745094 LG1_386_H10.b1_A002 Light Grown 1 (L... 313 2e-083
gb|BE356396.1|BE356396 DG1_124_C12.g1_A002 Dark Grown 1 (DG... 311 7e-083
gb|BE362440.1|BE362440 DG1_86_G11.g1_A002 Dark Grown 1 (DG1... 311 7e-083
gb|BE366389.1|BE366389 PI1_32_G11.g1_A002 Pathogen induced ... 311 7e-083
gb|BE367610.1|BE367610 PI1_9_C03.b1_A002 Pathogen induced 1... 311 7e-083
gb|BE597313.1|BE597313 PI1_71_H11.g1_A002 Pathogen induced ... 311 7e-083
gb|BG322945.1|BG322945 EM1_13_A08.g1_A002 Embryo 1 (EM1) So... 311 7e-083
gb|BG605893.1|BG605893 RHIZ2_82_H03.g1_A003 Rhizome2 (RHIZ2... 311 7e-083
gb|CD230943.1|CD230943 SS1_7_G07.b1_A012 Salt-stressed seed... 311 7e-083
gb|CN142633.1|CN142633 WOUND1_11_E10.b1_A002 Wounded leaves... 311 7e-083
gb|CX611320.1|CX611320 ANR1_24_A11.b1_A002 Anaerobic roots ... 311 7e-083
gb|CX612229.1|CX612229 GABR1_1_F05.b1_A002 GA- or brassinol... 311 7e-083
gb|BE366522.1|BE366522 PI1_34_H11.g1_A002 Pathogen induced ... 309 3e-082
gb|BE357856.1|BE357856 DG1_22_E03.g1_A002 Dark Grown 1 (DG1... 307 1e-081
gb|BE363124.1|BE363124 DG1_9_B10.g1_A002 Dark Grown 1 (DG1)... 307 1e-081
gb|BE597156.1|BE597156 PI1_71_D08.g1_A002 Pathogen induced ... 307 1e-081
gb|BG356338.1|BG356338 EM1_21_C10.g1_A002 Embryo 1 (EM1) So... 307 1e-081
gb|BG649171.1|BG649171 EM1_77_D05.g1_A002 Embryo 1 (EM1) So... 307 1e-081
gb|BG463344.1|BG463344 EM1_48_D04.g1_A002 Embryo 1 (EM1) So... 305 5e-081
gb|BG557751.1|BG557751 EM1_56_E08.g1_A002 Embryo 1 (EM1) So... 305 5e-081
gb|BG053102.1|BG053102 RHIZ2_16_F05.b1_A003 Rhizome2 (RHIZ2... 303 2e-080
gb|BG464420.1|BG464420 EM1_69_F02.g1_A002 Embryo 1 (EM1) So... 303 2e-080
gb|BG465844.1|BG465844 RHIZ2_45_C05.g1_A003 Rhizome2 (RHIZ2... 301 7e-080
gb|BE601222.1|BE601222 PI1_90_D10.g1_A002 Pathogen induced ... 299 3e-079
gb|AW286250.1|AW286250 LG1_329_D02.g1_A002 Light Grown 1 (L... 297 1e-078
gb|BG410739.1|BG410739 EM1_25_D02.g1_A002 Embryo 1 (EM1) So... 295 4e-078
gb|CN129430.1|CN129430 RHOH1_35_H09.b3_A002 Acid- and alkal... 295 4e-078
gb|CX613949.1|CX613949 GABR1_11_D09.b1_A002 GA- or brassino... 293 2e-077
gb|BE600455.1|BE600455 PI1_96_F08.g1_A002 Pathogen induced ... 291 7e-077
gb|BG101968.1|BG101968 RHIZ2_22_A08.g1_A003 Rhizome2 (RHIZ2... 289 3e-076
gb|BI074979.1|BI074979 IP1_18_D11.g1_A002 Immature pannicle... 289 3e-076
gb|BG357499.1|BG357499 OV2_30_F09.g1_A002 Ovary 2 (OV2) Sor... 285 4e-075
gb|BI076260.1|BI076260 IP1_27_H10.b1_A002 Immature pannicle... 285 4e-075
gb|CX608339.1|CX608339 ANR1_38_B10.b1_A002 Anaerobic roots ... 285 4e-075
gb|BE595970.1|BE595970 PI1_50_F07.g1_A002 Pathogen induced ... 283 2e-074
gb|BE597769.1|BE597769 PI1_65_A08.g1_A002 Pathogen induced ... 283 2e-074
gb|BM329549.1|BM329549 PIC1_39_E11.g1_A002 Pathogen-infecte... 283 2e-074
gb|BG103169.1|BG103169 RHIZ2_19_A05.g1_A003 Rhizome2 (RHIZ2... 280 3e-073
gb|AW922830.1|AW922830 DG1_46_E01.g1_A002 Dark Grown 1 (DG1... 278 1e-072
gb|CN150104.1|CN150104 WOUND1_67_A06.b1_A002 Wounded leaves... 266 4e-069
gb|BG557142.1|BG557142 EM1_43_B03.g1_A002 Embryo 1 (EM1) So... 256 4e-066
gb|BG557738.1|BG557738 EM1_56_C11.g1_A002 Embryo 1 (EM1) So... 256 4e-066
gb|BG559714.1|BG559714 RHIZ2_72_G03.g1_A003 Rhizome2 (RHIZ2... 256 4e-066
gb|BI245816.1|BI245816 IP1_64_G08.g1_A002 Immature pannicle... 256 4e-066
gb|BF421479.1|BF421479 FM1_8_C06.g1_A003 Floral-Induced Mer... 254 1e-065
gb|BG357011.1|BG357011 OV2_12_G04.g1_A002 Ovary 2 (OV2) Sor... 254 1e-065
gb|BG410740.1|BG410740 EM1_25_D03.g1_A002 Embryo 1 (EM1) So... 254 1e-065
gb|BI098041.1|BI098041 IP1_31_C11.g1_A002 Immature pannicle... 254 1e-065
gb|CD236302.1|CD236302 SS1_33_F06.b1_A012 Salt-stressed see... 254 1e-065
gb|CB925743.1|CB925743 ABA1_23_H03.b1_A012 Abscisic acid-tr... 246 4e-063
gb|CD232383.1|CD232383 SS1_45_G04.b1_A012 Salt-stressed see... 246 4e-063
gb|BG948096.1|BG948096 IP1_9_D04.g1_A002 Immature pannicle ... 244 1e-062
gb|BM326545.1|BM326545 PIC1_58_D04.b1_A002 Pathogen-infecte... 242 6e-062
gb|BM326554.1|BM326554 PIC1_58_E03.b1_A002 Pathogen-infecte... 242 6e-062
gb|BG050656.1|BG050656 FM1_71_A11.g1_A003 Floral-Induced Me... 234 1e-059
gb|CX615590.1|CX615590 GABR1_21_C07.b1_A002 GA- or brassino... 230 2e-058
gb|CF429470.1|CF429470 PH1_22_B06.b1_A002 Phosphorous-defic... 228 8e-058
gb|BE361065.1|BE361065 DG1_69_D05.b1_A002 Dark Grown 1 (DG1... 226 3e-057
gb|BE600378.1|BE600378 PI1_95_F05.g1_A002 Pathogen induced ... 226 3e-057
gb|BG559290.1|BG559290 RHIZ2_53_A07.b1_A003 Rhizome2 (RHIZ2... 226 3e-057
gb|BG932951.1|BG932951 DG1_69_D05.g1_A002 Dark Grown 1 (DG1... 226 3e-057
gb|AW747209.1|AW747209 WS1_66_A02.g1_A002 Water-stressed 1 ... 224 1e-056
gb|BE361068.1|BE361068 DG1_69_D01.b1_A002 Dark Grown 1 (DG1... 224 1e-056
gb|BG605868.1|BG605868 RHIZ2_82_E04.g1_A003 Rhizome2 (RHIZ2... 222 5e-056
gb|BG947986.1|BG947986 IP1_7_H10.b1_A002 Immature pannicle ... 220 2e-055
gb|BF481288.1|BF481288 FM1_18_B01.g1_A003 Floral-Induced Me... 218 8e-055
gb|BF705324.1|BF705324 RHIZ2_3_F03.g1_A003 Rhizome2 (RHIZ2)... 218 8e-055
gb|BG102510.1|BG102510 RHIZ2_34_A03.g1_A003 Rhizome2 (RHIZ2... 218 8e-055
gb|AW564507.1|AW564507 LG1_295_D08.b1_A002 Light Grown 1 (L... 216 3e-054
gb|BM329194.1|BM329194 PIC1_34_F01.g1_A002 Pathogen-infecte... 216 3e-054
gb|AW924400.1|AW924400 WS1_69_D09.b1_A002 Water-stressed 1 ... 214 1e-053
gb|BG047904.1|BG047904 OV1_25_C03.g1_A002 Ovary 1 (OV1) Sor... 214 1e-053
gb|BG411855.1|BG411855 OV2_38_H12.g1_A002 Ovary 2 (OV2) Sor... 210 2e-052
gb|BG463052.1|BG463052 EM1_46_H10.g1_A002 Embryo 1 (EM1) So... 208 8e-052
gb|CW404669.1|CW404669 fsbb001f096o14f0 Sorghum methylation... 202 5e-050
gb|CF486545.1|CF486545 POL1_38_G10.b1_A002 Pollen Sorghum b... 202 5e-050
gb|AW565661.1|AW565661 LG1_347_F07.g1_A002 Light Grown 1 (L... 194 1e-047
gb|BE598557.1|BE598557 PI1_83_A11.g1_A002 Pathogen induced ... 194 1e-047
gb|BF421228.1|BF421228 FM1_7_B01.g1_A003 Floral-Induced Mer... 192 5e-047
gb|BG357368.1|BG357368 OV2_29_A03.g1_A002 Ovary 2 (OV2) Sor... 192 5e-047
gb|BE596186.1|BE596186 PI1_50_F07.b1_A002 Pathogen induced ... 188 7e-046
gb|BF420923.1|BF420923 FM1_5_A01.g1_A003 Floral-Induced Mer... 180 2e-043
gb|BG051704.1|BG051704 FM1_60_C06.g1_A003 Floral-Induced Me... 180 2e-043
gb|BE360767.1|BE360767 DG1_66_D11.g2_A002 Dark Grown 1 (DG1... 170 2e-040
gb|BG053146.1|BG053146 RHIZ2_30_E07.g1_A003 Rhizome2 (RHIZ2... 170 2e-040
gb|BG053445.1|BG053445 RHIZ2_9_B02.g1_A003 Rhizome2 (RHIZ2)... 170 2e-040
gb|BM325081.1|BM325081 PIC1_39_E11.b1_A002 Pathogen-infecte... 170 2e-040
gb|AW563231.1|AW563231 LG1_204_E12.g1_A002 Light Grown 1 (L... 168 7e-040
gb|BM330243.1|BM330243 PIC1_49_B10.g1_A002 Pathogen-infecte... 168 7e-040
gb|AW745181.1|AW745181 LG1_386_H10.g1_A002 Light Grown 1 (L... 167 3e-039
gb|BE919028.1|BE919028 FM1_3_B09.g1_A003 Floral-Induced Mer... 167 3e-039
gb|BI098922.1|BI098922 IP1_35_A06.b1_A002 Immature pannicle... 167 3e-039
gb|BM329929.1|BM329929 PIC1_45_A08.g1_A002 Pathogen-infecte... 167 3e-039
gb|BF421489.1|BF421489 FM1_8_D06.g1_A003 Floral-Induced Mer... 165 1e-038
gb|BG947648.1|BG947648 IP1_7_D02.g1_A002 Immature pannicle ... 165 1e-038
gb|BM327790.1|BM327790 PIC1_17_E12.g1_A002 Pathogen-infecte... 165 1e-038
gb|AI724019.1|AI724019 RHIZ1_27_E05.y1_A001 Rhizome1 (RHIZ1... 163 4e-038
gb|AW283530.1|AW283530 LG1_285_G11.g1_A002 Light Grown 1 (L... 163 4e-038
gb|BG558975.1|BG558975 RHIZ2_53_A07.g1_A003 Rhizome2 (RHIZ2... 163 4e-038
gb|BI076395.1|BI076395 IP1_26_H01.g1_A002 Immature pannicle... 163 4e-038
gb|CD204785.1|CD204785 HS1_10_G03.b1_A012 Heat-shocked seed... 161 2e-037
gb|CD225598.1|CD225598 CCC1_40_C04.b1_A007 Callus culture/c... 161 2e-037
gb|BG932948.1|BG932948 DG1_69_D01.g1_A002 Dark Grown 1 (DG1... 159 7e-037
gb|BM318335.1|BM318335 PI1_77_D06.g9_A002 Pathogen induced ... 159 7e-037
gb|BF655811.1|BF655811 FM1_41_F09.g1_A003 Floral-Induced Me... 157 3e-036
gb|AW285080.1|AW285080 LG1_300_C02.g1_A002 Light Grown 1 (L... 155 1e-035
gb|AW286161.1|AW286161 LG1_328_B12.g1_A002 Light Grown 1 (L... 155 1e-035
gb|BG051982.1|BG051982 RHIZ2_7_D10.g1_A003 Rhizome2 (RHIZ2)... 155 1e-035
gb|AW286225.1|AW286225 LG1_329_A06.g1_A002 Light Grown 1 (L... 153 4e-035
gb|BF422055.1|BF422055 FM1_12_D04.g1_A003 Floral-Induced Me... 153 4e-035
gb|BG053031.1|BG053031 RHIZ2_16_F01.g1_A003 Rhizome2 (RHIZ2... 153 4e-035
gb|BG488067.1|BG488067 RHIZ2_62_H06.g1_A003 Rhizome2 (RHIZ2... 153 4e-035
gb|BG558557.1|BG558557 RHIZ2_57_D04.g1_A003 Rhizome2 (RHIZ2... 153 4e-035
gb|CF429514.1|CF429514 PH1_22_B06.g1_A002 Phosphorous-defic... 153 4e-035
gb|BG273582.1|BG273582 OV2_27_E01.b1_A002 Ovary 2 (OV2) Sor... 151 2e-034
gb|BM324707.1|BM324707 PIC1_34_F01.b1_A002 Pathogen-infecte... 151 2e-034
gb|CN136390.1|CN136390 OX1_42_F05.g1_A002 Oxidatively-stres... 151 2e-034
gb|CX606362.1|CX606362 ANR1_2_D02.g1_A002 Anaerobic roots S... 151 2e-034
gb|AW282685.1|AW282685 LG1_303_B11.g1_A002 Light Grown 1 (L... 147 2e-033
gb|AW284034.1|AW284034 LG1_267_A02.g1_A002 Light Grown 1 (L... 147 2e-033
gb|AW284884.1|AW284884 LG1_295_D08.g1_A002 Light Grown 1 (L... 147 2e-033
gb|AW747625.1|AW747625 WS1_74_D02.g1_A002 Water-stressed 1 ... 147 2e-033
gb|AW925015.1|AW925015 WS1_74_D02.b1_A002 Water-stressed 1 ... 147 2e-033
gb|BG947695.1|BG947695 IP1_7_H10.g1_A002 Immature pannicle ... 147 2e-033
gb|BI098032.1|BI098032 IP1_31_C01.g1_A002 Immature pannicle... 147 2e-033
gb|BM331608.1|BM331608 PIC1_58_E03.g1_A002 Pathogen-infecte... 147 2e-033
gb|BM331626.1|BM331626 PIC1_58_D04.g1_A002 Pathogen-infecte... 147 2e-033
gb|CD209722.1|CD209722 HS1_54_E01.b1_A012 Heat-shocked seed... 147 2e-033
gb|CD235373.1|CD235373 SS1_29_B05.b1_A012 Salt-stressed see... 147 2e-033
gb|CD430306.1|CD430306 ETH1_18_E11.b1_A002 Ethylene-treated... 147 2e-033
gb|CF073452.1|CF073452 FE1_10_B03.b1_A002 Iron-deficient se... 147 2e-033
gb|DR831503.2|DR831503 MM85 Sorghum bicolor greenbug-respon... 145 1e-032
gb|CW032651.1|CW032651 104_261_10501510_114_30363 Sorghum m... 143 4e-032
gb|CW293823.1|CW293823 104_774_11414863_116_35773_024 Sorgh... 143 4e-032
gb|CW293824.1|CW293824 104_774_11414863_148_35772_024 Sorgh... 143 4e-032
gb|CW445645.1|CW445645 fsbb001f170o11k0 Sorghum methylation... 143 4e-032
gb|AW285201.1|AW285201 LG1_235_F06.g1_A002 Light Grown 1 (L... 143 4e-032
gb|BI098633.1|BI098633 IP1_35_A06.g1_A002 Immature pannicle... 143 4e-032
gb|BI098742.1|BI098742 IP1_36_D12.g1_A002 Immature pannicle... 143 4e-032
gb|BI245609.1|BI245609 IP1_67_G03.g1_A002 Immature pannicle... 143 4e-032
gb|BM326907.1|BM326907 PIC1_4_F02.g1_A002 Pathogen-infected... 143 4e-032
gb|CF073400.1|CF073400 FE1_10_G04.b1_A002 Iron-deficient se... 143 4e-032
gb|BE600460.1|BE600460 PI1_96_G03.g1_A002 Pathogen induced ... 139 6e-031
gb|CD207655.1|CD207655 HS1_34_C02.b1_A012 Heat-shocked seed... 139 6e-031
gb|CN140584.1|CN140584 OX1_45_G08.b1_A002 Oxidatively-stres... 139 6e-031
gb|BE353125.1|BE353125 DG1_4_B06.g1_A002 Dark Grown 1 (DG1)... 137 2e-030
gb|BF657634.1|BF657634 OV2_17_G03.g1_A002 Ovary 2 (OV2) Sor... 137 2e-030
gb|BG463516.1|BG463516 EM1_49_E01.g1_A002 Embryo 1 (EM1) So... 137 2e-030
gb|BI099633.1|BI099633 IP1_44_G01.g1_A002 Immature pannicle... 137 2e-030
gb|CW404670.1|CW404670 fsbb001f096o14k0 Sorghum methylation... 133 4e-029
gb|AW283874.1|AW283874 LG1_260_H09.g1_A002 Light Grown 1 (L... 133 4e-029
gb|BG103419.1|BG103419 RHIZ2_20_B06.b1_A003 Rhizome2 (RHIZ2... 133 4e-029
gb|BG559043.1|BG559043 RHIZ2_53_H04.g1_A003 Rhizome2 (RHIZ2... 131 1e-028
gb|AW284347.1|AW284347 LG1_275_D07.g1_A002 Light Grown 1 (L... 127 2e-027
gb|AW284529.1|AW284529 LG1_270_C06.g1_A002 Light Grown 1 (L... 127 2e-027
gb|AW285661.1|AW285661 LG1_319_G07.g1_A002 Light Grown 1 (L... 127 2e-027
gb|BG673879.1|BG673879 EM1_60_D08.g1_A002 Embryo 1 (EM1) So... 127 2e-027
gb|BM330552.1|BM330552 PIC1_53_E04.g1_A002 Pathogen-infecte... 127 2e-027
gb|CN137831.1|CN137831 OX1_60_A05.b1_A002 Oxidatively-stres... 127 2e-027
gb|AW285626.1|AW285626 LG1_319_C10.g1_A002 Light Grown 1 (L... 121 1e-025
gb|BG103662.1|BG103662 RHIZ2_39_C09.g1_A003 Rhizome2 (RHIZ2... 121 1e-025
gb|AI724197.1|AI724197 RHIZ1_8_D07.y2_A001 Rhizome1 (RHIZ1)... 119 6e-025
gb|BG947615.1|BG947615 IP1_6_H01.g1_A002 Immature pannicle ... 119 6e-025
gb|BG713874.1|BG713874 EM1_60_D08.g2_A002 Embryo 1 (EM1) So... 111 1e-022
gb|BM323288.1|BM323288 PIC1_17_E12.b1_A002 Pathogen-infecte... 111 1e-022
gb|CF488723.1|CF488723 POL1_51_F11.g1_A002 Pollen Sorghum b... 111 1e-022
gb|CF485715.1|CF485715 POL1_33_D12.b1_A002 Pollen Sorghum b... 107 2e-021
gb|BM322421.1|BM322421 PIC1_4_F02.b1_A002 Pathogen-infected... 103 3e-020
gb|BG103997.1|BG103997 RHIZ2_39_C09.b1_A003 Rhizome2 (RHIZ2... 101 1e-019
gb|BF421201.1|BF421201 FM1_6_F09.b1_A003 Floral-Induced Mer... 100 5e-019
gb|AW922177.1|AW922177 LG1_346_D03.b1_A002 Light Grown 1 (L... 98 2e-018
gb|AW284689.1|AW284689 LG1_214_C09.g1_A002 Light Grown 1 (L... 94 3e-017
gb|BE356403.1|BE356403 DG1_124_A05.g1_A002 Dark Grown 1 (DG... 90 5e-016
gb|BG054002.1|BG054002 OV2_1_A04.g1_A002 Ovary 2 (OV2) Sorg... 90 5e-016
gb|BG240694.1|BG240694 OV1_37_B03.g1_A002 Ovary 1 (OV1) Sor... 90 5e-016
gb|AW284290.1|AW284290 LG1_269_B05.g1_A002 Light Grown 1 (L... 86 8e-015
gb|CF759319.1|CF759319 DSAF1_43_F11.b1_A011 Drought-stresse... 86 8e-015
gb|CW021357.1|CW021357 104_160_10431217_1_30004 Sorghum met... 82 1e-013
gb|CF487407.1|CF487407 POL1_43_D02.g1_A002 Pollen Sorghum b... 80 5e-013
gb|BG559542.1|BG559542 RHIZ2_68_C05.g1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|AW287380.2|AW287380 LG1_303_B11.b1_A002 Light Grown 1 (L... 76 8e-012
gb|CN129525.1|CN129525 RHOH1_35_H09.g1_A002 Acid- and alkal... 76 8e-012
gb|BG465983.1|BG465983 RHIZ2_47_A11.g1_A003 Rhizome2 (RHIZ2... 74 3e-011
gb|CW224072.1|CW224072 104_660_11203255_148_37194_028 Sorgh... 68 2e-009
gb|AW285645.1|AW285645 LG1_319_E10.g1_A002 Light Grown 1 (L... 68 2e-009
gb|CN150172.1|CN150172 WOUND1_67_A06.g1_A002 Wounded leaves... 66 7e-009
gb|BF655772.1|BF655772 FM1_41_A05.g1_A003 Floral-Induced Me... 64 3e-008
gb|BI211782.1|BI211782 IP1_27_H10.g1_A002 Immature pannicle... 64 3e-008
gb|CX607251.1|CX607251 ANR1_7_B10.g1_A002 Anaerobic roots S... 58 2e-006
gb|AW679846.1|AW679846 WS1_32_G09.g1_A002 Water-stressed 1 ... 52 1e-004
gb|AW922757.1|AW922757 DG1_45_A12.g1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|CF486633.1|CF486633 POL1_38_G10.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CN142711.1|CN142711 WOUND1_11_E10.g1_A002 Wounded leaves... 44 0.027
gb|BZ337412.1|BZ337412 ia87d08.g1 WGS-SbicolorF (JM107 adap... 42 0.11
gb|CW311411.1|CW311411 104_800_11470219_116_35753_066 Sorgh... 42 0.11
gb|CW311412.1|CW311412 104_800_11470219_148_35757_066 Sorgh... 42 0.11
gb|CW456656.1|CW456656 fsbb001f202b17f0 Sorghum methylation... 42 0.11
gb|CW478272.1|CW478272 fsbb001f236b08f0 Sorghum methylation... 42 0.11
gb|BG273362.1|BG273362 OV2_27_E01.g1_A002 Ovary 2 (OV2) Sor... 42 0.11
gb|CW082196.1|CW082196 104_423_10943278_116_32332_093 Sorgh... 40 0.42
gb|CW177475.1|CW177475 104_590_11159046_148_36592_017 Sorgh... 40 0.42
gb|CW256652.1|CW256652 104_721_11226907_148_35144_068 Sorgh... 40 0.42
gb|CW264608.1|CW264608 104_733_11231396_148_35250_072 Sorgh... 40 0.42
gb|CW269409.1|CW269409 104_740_11401828_148_35315_006 Sorgh... 40 0.42
gb|CW304676.1|CW304676 104_789_11465908_116_35702_004 Sorgh... 40 0.42
gb|CW314065.1|CW314065 104_804_11471624_116_35793_022 Sorgh... 40 0.42
gb|CW324028.1|CW324028 104_818_11476940_116_35905_074 Sorgh... 40 0.42
gb|CW330203.1|CW330203 104_827_11480249_148_36008_079 Sorgh... 40 0.42
gb|CW391873.1|CW391873 fsbb001f078d17k0 Sorghum methylation... 40 0.42
gb|CW426001.1|CW426001 fsbb001f137d04k0 Sorghum methylation... 40 0.42
gb|CW455964.1|CW455964 fsbb001f201b13k0 Sorghum methylation... 40 0.42
gb|CW501406.1|CW501406 fsbb001f297d08f0 Sorghum methylation... 40 0.42
gb|AW745795.1|AW745795 WS1_37_A08.g1_A002 Water-stressed 1 ... 40 0.42
gb|BI139595.1|BI139595 IP1_46_E02.g1_A002 Immature pannicle... 40 0.42
gb|CX622121.1|CX622121 GABR1_62_D09.b2_A002 GA- or brassino... 40 0.42
>gb|DN551925.1|DN551925 pSPR-RT-MR-H2_F08_C293 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1553
Score = 1080 bits (545), Expect = 0.0
Identities = 625/652 (95%)
Strand = Plus / Minus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 951 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 892
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 832
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 831 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 772
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 771 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 712
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggg 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 711 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtg 652
Query: 301 gcgccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggc 360
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 651 gcgccttctccggcaaggaccccaccaaggtggaccgcagcggcgcctacatcgccaggc 592
Query: 361 aggccgccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcct 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 591 aggccgccaagagcatcgtggccagtggcctcgcccgccgctgcctcgtgcaggtctcgt 532
Query: 421 acgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacca 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 531 acgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagca 472
Query: 481 tccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatga 540
|||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 471 tcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatga 412
Query: 541 tcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacg 600
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 411 tcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacg 352
Query: 601 gccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 gccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 300
Score = 91.7 bits (46), Expect = 1e-016
Identities = 81/91 (89%), Gaps = 5/91 (5%)
Strand = Plus / Minus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 107 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 52
Query: 918 gccaggattaatgcgctggtcttttatcttt 948
|||||||| |||||||| || |||||||||
Sbjct: 51 accaggatt-atgcgctgatcatttatcttt 22
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Minus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 233 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 174
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 173 ctcctggatgtgtgtttgatcagtgactggctgctc 138
>gb|CW274729.1|CW274729 104_747_11404582_116_35375_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404582, DNA
sequence
Length = 578
Score = 979 bits (494), Expect = 0.0
Identities = 554/574 (96%)
Strand = Plus / Minus
Query: 79 ccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgacctcaaggagcacg 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgacctcaaggagcacg 519
Query: 139 tcatcaagcccgtcatcccggagaggtacctggacgagaagaccatcttccacctcaacc 198
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 518 tcatcaagcccgtcatcccggagaagtacctcgacgagaagaccatcttccacctcaacc 459
Query: 199 cgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctcaccggccgcaaga 258
||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 458 cgtcgggccgcttcgtcatcggtgggccccacggcgacgccggcctcaccggccgcaaga 399
Query: 259 tcatcatcgacacctacggcggctggggagcccacggcgggggcgccttctccggcaagg 318
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 398 tcatcatcgacacctacggcggctggggtgcccacggcggtggcgccttctccggcaagg 339
Query: 319 accccaccaaggtggaccgcagcggggcctacgtcgccaggcaggccgccaagagcatcg 378
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 338 accccaccaaggtggaccgcagcggcgcctacatcgccaggcaggccgccaagagcatcg 279
Query: 379 tggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgccatcggcgtgccgg 438
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 tggccagcggcctcgcccgccgctgcctcgtgcaggtctcctacgccatcggcgtgccgg 219
Query: 439 agcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaaggagatcc 498
||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||
Sbjct: 218 agcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaaggagatcc 159
Query: 499 taaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaacctcgacc 558
| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 158 tcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaacctcgacc 99
Query: 559 tcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttggccgtgacg 618
| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98 tgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttggccgtgacg 39
Query: 619 acgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||| ||||||||
Sbjct: 38 acgccgacttcacctgggaggtggtgaagcccct 5
>gb|BG158422.1|BG158422 FM1_60_C08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 831 bits (419), Expect = 0.0
Identities = 476/495 (96%)
Strand = Plus / Plus
Query: 63 cacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgcc 122
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgcc 71
Query: 123 gacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagacc 182
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 72 gacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaagacc 131
Query: 183 atcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggc 242
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 132 atcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccggc 191
Query: 243 ctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggc 302
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 192 ctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtggc 251
Query: 303 gccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcag 362
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 252 gccttctccggcaaggaccccaccaaggtggaccgcagcggcgcctacatcgccaggcag 311
Query: 363 gccgccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctac 422
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 312 gccgccaagagcatcgtggccagtggcctcgcccgccgctgcctcgtgcaggtctcgtac 371
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 372 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatc 431
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 432 ccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatc 491
Query: 543 accatcaacctcgac 557
|||||||||||||||
Sbjct: 492 accatcaacctcgac 506
>gb|BG103894.1|BG103894 RHIZ2_38_H12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 478
Score = 654 bits (330), Expect = 0.0
Identities = 371/385 (96%)
Strand = Plus / Plus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 94 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 153
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 213
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 214 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 273
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 274 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 333
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggg 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 334 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtg 393
Query: 301 gcgccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggc 360
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 394 gcgccttctccggcaaggaccccaccaaggtggaccgcagcggcgcctacatcgccaggc 453
Query: 361 aggccgccaagagcatcgtggccag 385
|||||||||||||||||||||||||
Sbjct: 454 aggccgccaagagcatcgtggccag 478
>gb|BF705362.1|BF705362 RHIZ2_3_A11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 497
Score = 569 bits (287), Expect = e-160
Identities = 322/334 (96%)
Strand = Plus / Plus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 164 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 223
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 283
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 284 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 343
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 344 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 403
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggg 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 404 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtg 463
Query: 301 gcgccttctccggcaaggaccccaccaaggtgga 334
||||||||||||||||||||||||||||||||||
Sbjct: 464 gcgccttctccggcaaggaccccaccaaggtgga 497
>gb|BG047981.1|BG047981 OV1_26_B09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 713
Score = 569 bits (287), Expect = e-160
Identities = 328/342 (95%)
Strand = Plus / Plus
Query: 311 cggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggccgccaa 370
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 1 cggcaaggaccccaccaaggtggaccgcagcggcgcctacatcgccaggcaggccgccaa 60
Query: 371 gagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgccatcgg 430
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 61 gagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtctcntacgccatcgg 120
Query: 431 cgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaa 490
||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 121 cgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaa 180
Query: 491 ggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaa 550
||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 181 ggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaa 240
Query: 551 cctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttgg 610
||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 cctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttgg 300
Query: 611 ccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 ccgtgacgacgccgacttcacctgggaggtggtgaagcccct 342
Score = 143 bits (72), Expect = 4e-032
Identities = 155/176 (88%), Gaps = 15/176 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 544 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 599
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 600 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 650
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 -tttttctt-ccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 704
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 461 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 513
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 418 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 477
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 478 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 522
>gb|BG051778.1|BG051778 FM1_58_C08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 338
Score = 545 bits (275), Expect = e-153
Identities = 311/323 (96%)
Strand = Plus / Plus
Query: 63 cacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgcc 122
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cacaccggcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgcc 71
Query: 123 gacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagacc 182
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 72 gacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaagacc 131
Query: 183 atcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggc 242
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 132 atcttccacctcaacccgtcgggccggttcgtcatcggtgggccccacggtgacgccggc 191
Query: 243 ctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggc 302
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 192 ctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtggc 251
Query: 303 gccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcag 362
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 252 gccttctccggcaaggaccccaccaaggtggaccgcagcggcgcctacatcgccaggcag 311
Query: 363 gccgccaagagcatcgtggccag 385
|||||||||||||||||||||||
Sbjct: 312 gccgccaagagcatcgtggccag 334
>gb|BE125314.1|BE125314 DG1_19_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 515 bits (260), Expect = e-144
Identities = 295/307 (96%)
Strand = Plus / Plus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 141 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 200
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 260
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 261 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 320
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 321 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 380
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggg 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 381 gcctcaccggccgcaagatcatcatcgacacctacggcggctggggtgcccacggcggtg 440
Query: 301 gcgcctt 307
|||||||
Sbjct: 441 gcgcctt 447
>gb|BF588452.1|BF588452 FM1_36_G10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 692
Score = 513 bits (259), Expect = e-143
Identities = 307/323 (95%)
Strand = Plus / Plus
Query: 330 gtggaccgcagcggggcctacgtcgccaggcaggccgccaagagcatcgtggccagcggc 389
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gtggaccgcagcggcgcctacatcgccaggcaggccgccaagagcatcgtggccagtggc 60
Query: 390 ctcgcccgccgctgcctcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtcc 449
||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 61 ctcgcccgccgctgcttcgtgcaggtctcgtacgccatcggcgtgccggagcccctgtcc 120
Query: 450 gtgttcgtcgactcctacggcaccgggaccatccccgacaaggagatcctaaagatcgtc 509
|||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||
Sbjct: 121 gtgttcgtcgactcgtacggcaccgggagcatcccggacaaggagatcctcaagatcgtc 180
Query: 510 aaggagaacttcgacttcaggccagggatgatcaccatcaacctcgacctcaagaagggc 569
||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 181 aaggagaacttcgacttcaggcccggcatgatcaccatcaacctcgacctgaagaaaggc 240
Query: 570 ggcaacaggttcatcaagaccgccgcatacggccactttggccgtgacgacgccgacttc 629
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 ggcaacaggttcatcaagaccgccgcctacggccactttggccgtgacgacgccgacttc 300
Query: 630 acctgggaggtggtcaagcccct 652
|||||||||||||| ||||||||
Sbjct: 301 acctgggaggtggtgaagcccct 323
Score = 170 bits (86), Expect = 2e-040
Identities = 164/186 (88%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 516 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 571
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 572 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 623
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 624 tttttttcttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 683
Query: 1037 ctatca 1042
||||||
Sbjct: 684 ctatca 689
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 390 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 449
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 450 ctcctggatgtgtgtttgatcagtgactggctgctc 485
>gb|BE125541.1|BE125541 DG1_27_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 423
Score = 484 bits (244), Expect = e-135
Identities = 273/283 (96%)
Strand = Plus / Plus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 141 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 200
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 260
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 261 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 320
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 321 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 380
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggcggctg 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctcaccggccgcaagatcatcatcgacacctacggcggctg 423
>gb|BE357999.1|BE357999 DG1_23_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 462 bits (233), Expect = e-128
Identities = 268/280 (95%)
Strand = Plus / Plus
Query: 373 gcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgccatcggcg 432
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 gcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtctcntacgccatcggcg 60
Query: 433 tgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaagg 492
||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||
Sbjct: 61 tgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaagg 120
Query: 493 agatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaacc 552
||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 121 agatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaacc 180
Query: 553 tcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttggcc 612
||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 tcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttggcc 240
Query: 613 gtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 gtgacgacgccgacttcacctgggaggtggtgaagcccct 280
Score = 131 bits (66), Expect = 1e-028
Identities = 153/176 (86%), Gaps = 17/176 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 482 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 537
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 538 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 588
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 --ttttctt--cccttttcgagtctgtactgaaactgctgagagatttgcagtttt 640
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 399 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 451
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 356 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 415
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 416 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 460
>gb|CW260857.1|CW260857 104_727_11229193_116_35197_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229193, DNA
sequence
Length = 618
Score = 456 bits (230), Expect = e-126
Identities = 259/269 (96%)
Strand = Plus / Minus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 269 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 210
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 150
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 149 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaagtacctcgacgagaaga 90
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 89 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 30
Query: 241 gcctcaccggccgcaagatcatcatcgac 269
|||||||||||||||||||||||||||||
Sbjct: 29 gcctcaccggccgcaagatcatcatcgac 1
>gb|BG054129.1|BG054129 OV2_1_E11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 479
Score = 450 bits (227), Expect = e-124
Identities = 265/278 (95%)
Strand = Plus / Plus
Query: 1 gcaanacccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcg 60
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 202 gcaagacccaggtcacggtggagtacgtcaacgagggcggcgccatggtgcccgtccgcg 261
Query: 61 tgcacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 120
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tccacaccgtcctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccg 321
Query: 121 ccgacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaaga 180
||||||||||||||||||| |||||||||||||||||| || |||||| ||||||||||
Sbjct: 322 ccgacctcaaggagcacgtattcaagcccgtcatcccggcgaagtacctcgacgagaaga 381
Query: 181 ccatcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccg 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 382 ccatcttccacctcaacccgtcgggccgcttcgtcatcggtgggccccacggcgacgccg 441
Query: 241 gcctcaccggccgcaagatcatcatcgacacctacggc 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcctcaccggccgcaagatcatcatcgacacctacggc 479
>gb|DN551707.1|DN551707 pSPR-L_F08_C224 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 963
Score = 422 bits (213), Expect = e-116
Identities = 541/650 (83%), Gaps = 3/650 (0%)
Strand = Plus / Minus
Query: 6 acccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcgtgcac 65
||||||||||| || |||||| || ||||| || |||||||| ||| |||| || |||
Sbjct: 942 acccaggtgacagttgagtaccgcaatgagggtggtgccatggtccccatccgtgtccac 883
Query: 66 accgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgac 125
|| || |||||||| |||||||| |||||||| |||||||| || ||||| || || |||
Sbjct: 882 actgtcctcatctctacccagcatgacgagacagtcaccaatgatgagattgctgctgac 823
Query: 126 ctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagaccatc 185
|| |||||||| ||||||||||| ||||||| ||| |||||| || ||||||||||||
Sbjct: 822 ctgaaggagcatgtcatcaagcctgtcatccntgagcagtaccttgatgagaagaccatc 763
Query: 186 ttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctc 245
|||||||| ||||| || || ||||| ||||| || || || ||||| || || || |||
Sbjct: 762 ttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggtctc 703
Query: 246 accggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggcgcc 305
|| ||||| ||||||||||| |||||||| || |||||||||||||| || || |||||
Sbjct: 702 actggccggaagatcatcattgacacctatggtggctggggagcccatggtggtggcgct 643
Query: 306 ttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggcc 365
||||||||||||||||| |||||||| |||||||| || |||||| | || ||||||||
Sbjct: 642 ttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacattgcaaggcaggct 583
Query: 366 gccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgcc 425
||||||||||| || |||| |||||| || |||||| | | || ||||| |||||||||
Sbjct: 582 gccaagagcattgttgccaacggccttgctcgccgcgccattgttcaggtctcctacgcc 523
Query: 426 atcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcccc 485
||||| ||||| ||||| || ||||| || || ||| | ||||||||||| || || |||
Sbjct: 522 atcggtgtgcctgagcctctctccgtctttgttgacacatacggcaccggcacgattccc 463
Query: 486 gacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcacc 545
|||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||| |
Sbjct: 462 gacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatcatc 403
Query: 546 atcaacctcgacctcaagaagggcggcaacagg---ttcatcaagaccgccgcatacggc 602
|||||||||||||||||||| || |||||| || | | ||||||| || || || |||
Sbjct: 402 atcaacctcgacctcaagaaaggtggcaacgggcgctacctcaagacggcggcctatggc 343
Query: 603 cactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||| | |||||| | |||||||||||||||||||| ||||||||
Sbjct: 342 cactttggaagggacgaccctgacttcacctgggaggtggtgaagcccct 293
>gb|DN552332.1|DN552332 pSPR-RT-A-H2_D12_C224 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 1288
Score = 422 bits (213), Expect = e-116
Identities = 541/650 (83%), Gaps = 3/650 (0%)
Strand = Plus / Minus
Query: 6 acccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcgtgcac 65
||||||||||| || |||||| || ||||| || |||||||| ||| |||| || |||
Sbjct: 942 acccaggtgacagttgagtaccgcaatgagggtggtgccatggtccccatccgtgtccac 883
Query: 66 accgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgac 125
|| || |||||||| |||||||| |||||||| |||||||| || ||||| || || |||
Sbjct: 882 actgtcctcatctctacccagcatgacgagacagtcaccaatgatgagattgctgctgac 823
Query: 126 ctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagaccatc 185
|| |||||||| ||||||||||| ||||||| ||| |||||| || ||||||||||||
Sbjct: 822 ctgaaggagcatgtcatcaagcctgtcatccntgagcagtaccttgatgagaagaccatc 763
Query: 186 ttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctc 245
|||||||| ||||| || || ||||| ||||| || || || ||||| || || || |||
Sbjct: 762 ttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggtctc 703
Query: 246 accggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggcgcc 305
|| ||||| ||||||||||| |||||||| || |||||||||||||| || || |||||
Sbjct: 702 actggccggaagatcatcattgacacctatggtggctggggagcccatggtggtggcgct 643
Query: 306 ttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggcc 365
||||||||||||||||| |||||||| |||||||| || |||||| | || ||||||||
Sbjct: 642 ttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacattgcaaggcaggct 583
Query: 366 gccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgcc 425
||||||||||| || |||| |||||| || |||||| | | || ||||| |||||||||
Sbjct: 582 gccaagagcattgttgccaacggccttgctcgccgcgccattgttcaggtctcctacgcc 523
Query: 426 atcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcccc 485
||||| ||||| ||||| || ||||| || || ||| | ||||||||||| || || |||
Sbjct: 522 atcggtgtgcctgagcctctctccgtctttgttgacacatacggcaccggcacgattccc 463
Query: 486 gacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcacc 545
|||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||| |
Sbjct: 462 gacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatcatc 403
Query: 546 atcaacctcgacctcaagaagggcggcaacagg---ttcatcaagaccgccgcatacggc 602
|||||||||||||||||||| || |||||| || | | ||||||| || || || |||
Sbjct: 402 atcaacctcgacctcaagaaaggtggcaacgggcgctacctcaagacggcggcctatggc 343
Query: 603 cactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||| | |||||| | |||||||||||||||||||| ||||||||
Sbjct: 342 cactttggaagggacgaccctgacttcacctgggaggtggtgaagcccct 293
>gb|CN136320.1|CN136320 OX1_42_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_42_F05_A002 3', mRNA sequence
Length = 836
Score = 414 bits (209), Expect = e-114
Identities = 484/575 (84%), Gaps = 3/575 (0%)
Strand = Plus / Plus
Query: 81 acccagcacgacgagaccgtcaccaacgacgagatcgccgccgacctcaaggagcacgtc 140
||||||||||||||||| |||||||| || ||||| || || ||||| |||||||| |||
Sbjct: 1 acccagcacgacgagacagtcaccaatgatgagattgctgctgacctgaaggagcatgtc 60
Query: 141 atcaagcccgtcatcccggagaggtacctggacgagaagaccatcttccacctcaacccg 200
|||||||| |||||||| ||| |||||| || |||||||||||||||||||| |||||
Sbjct: 61 atcaagcctgtcatccctgagcagtaccttgatgagaagaccatcttccaccttaaccca 120
Query: 201 tcggggcgcttcgtcatcggcgggccccacggggacgccggcctcaccggccgcaagatc 260
|| || ||||| ||||| || || || ||||| || || || || || ||||| ||||||
Sbjct: 121 tctggtcgctttgtcattggtggacctcacggtgatgctggtcttactggccggaagatc 180
Query: 261 atcatcgacacctacggcggctggggagcccacggcgggggcgccttctccggcaaggac 320
||||| |||||||| || ||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 181 atcattgacacctatggtggctggggagcccacggtggtggcgctttctccggcaaggac 240
Query: 321 cccaccaaggtggaccgcagcggggcctacgtcgccaggcaggccgccaagagcatcgtg 380
|| |||||||| |||||||| || |||||| |||| |||||||| ||||||||||| ||
Sbjct: 241 ccaaccaaggtcgaccgcagtggagcctacatcgcaaggcaggctgccaagagcattgtt 300
Query: 381 gccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgccatcggcgtgccggag 440
|||| |||||| || |||||| | |||| ||||| |||||||||||||| ||||| |||
Sbjct: 301 gccaacggccttgctcgccgcgccatcgtccaggtctcctacgccatcggtgtgcctgag 360
Query: 441 cccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaaggagatccta 500
|| || ||||| || || ||| | || |||||||| || || || ||||||||||||||
Sbjct: 361 cctctctccgtctttgttgacacgtatggcaccggcacgattcctgacaaggagatcctc 420
Query: 501 aagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaacctcgacctc 560
||||| || ||||||||||| ||||||||||| || ||||||| ||||||||||||||||
Sbjct: 421 aagattgtgaaggagaactttgacttcaggcctggcatgatcatcatcaacctcgacctc 480
Query: 561 aagaagggcggcaacagg---ttcatcaagaccgccgcatacggccactttggccgtgac 617
||||| || |||||| || | | ||||||| || || |||||||||||||| | |||
Sbjct: 481 aagaaaggtggcaacgggcgctacctcaagacggcggcctacggccactttggaagggac 540
Query: 618 gacgccgacttcacctgggaggtggtcaagcccct 652
||| | |||||||||||||||||||| ||||||||
Sbjct: 541 gaccctgacttcacctgggaggtggtgaagcccct 575
>gb|BF421124.1|BF421124 FM1_6_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 605
Score = 408 bits (206), Expect = e-112
Identities = 242/254 (95%)
Strand = Plus / Plus
Query: 399 cgctgcctcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtc 458
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgctgcctcgtgcaggtctcgtacgccatcggcgtgccggagcccctgtccgtgttcgtc 60
Query: 459 gactcctacggcaccgggaccatccccgacaaggagatcctaaagatcgtcaaggagaac 518
||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct: 61 gactcgtacggcaccgggagcatcccggacaaggagatcctcaagatcgtcaaggagaac 120
Query: 519 ttcgacttcaggccagggatgatcaccatcaacctcgacctcaagaagggcggcaacagg 578
|||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 121 ttcgacttcaggcccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacagg 180
Query: 579 ttcatcaagaccgccgcatacggccactttggccgtgacgacgccgacttcacctgggag 638
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcatcaagaccgccgcctacggccactttggccgtgacgacgccgacttcacctgggag 240
Query: 639 gtggtcaagcccct 652
||||| ||||||||
Sbjct: 241 gtggtgaagcccct 254
Score = 127 bits (64), Expect = 2e-027
Identities = 146/168 (86%), Gaps = 14/168 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 447 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 502
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 503 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 554
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagattt 1025
||||| | | |||||||||||||||||||||||||||| ||||||||
Sbjct: 555 -tttttttcttcccttttcgagtctgtactgaaactgct-agagattt 600
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 321 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 380
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 381 ctcctggatgtgtgtttgatcagtgactggctgctc 416
>gb|CN137899.1|CN137899 OX1_60_A05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_A05_A002 5', mRNA sequence
Length = 805
Score = 408 bits (206), Expect = e-112
Identities = 479/570 (84%)
Strand = Plus / Plus
Query: 6 acccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcgtgcac 65
||||||||||| || |||||| || ||||| || |||||||| ||| |||| || |||
Sbjct: 182 acccaggtgacagttgagtaccgcaatgagggtggtgccatggtccccatccgtgtccac 241
Query: 66 accgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgac 125
|| || |||||||| ||||||||||||||||| |||||||| || ||||| || || |||
Sbjct: 242 actgtcctcatctctacccagcacgacgagacagtcaccaatgatgagattgctgctgac 301
Query: 126 ctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagaccatc 185
|| |||||||| ||||||||||| |||||||| ||| |||||| || ||||||||||||
Sbjct: 302 ctgaaggagcatgtcatcaagcctgtcatccctgagcagtaccttgatgagaagaccatc 361
Query: 186 ttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctc 245
|||||||| ||||| || || ||||| ||||| || || || ||||| || || || ||
Sbjct: 362 ttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggtctt 421
Query: 246 accggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggcgcc 305
|| ||||| ||||||||||| |||||||| || ||||||||||||||||| || |||||
Sbjct: 422 actggccggaagatcatcattgacacctatggtggctggggagcccacggtggtggcgct 481
Query: 306 ttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggcc 365
||||||||||||||||| |||||||| |||||||| || |||||| |||| ||||||||
Sbjct: 482 ttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacatcgcaaggcaggct 541
Query: 366 gccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgcc 425
||||||||||| || |||| |||||| || |||||| | |||| ||||| |||||||||
Sbjct: 542 gccaagagcattgttgccaacggccttgctcgccgcgccatcgtccaggtctcctacgcc 601
Query: 426 atcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcccc 485
||||| ||||| ||||| || ||||| || || ||| | || |||||||| || || ||
Sbjct: 602 atcggtgtgcctgagcctctctccgtctttgttgacacgtatggcaccggcacgattcct 661
Query: 486 gacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcacc 545
|||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||| |
Sbjct: 662 gacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatcatc 721
Query: 546 atcaacctcgacctcaagaagggcggcaac 575
|||||||||||||||||||| || ||||||
Sbjct: 722 atcaacctcgacctcaagaaaggtggcaac 751
>gb|CX611404.1|CX611404 ANR1_24_A11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A11_A002 5', mRNA sequence
Length = 729
Score = 408 bits (206), Expect = e-112
Identities = 479/570 (84%)
Strand = Plus / Plus
Query: 6 acccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcgtgcac 65
||||||||||| || |||||| || ||||| || |||||||| ||| |||| || |||
Sbjct: 101 acccaggtgacagttgagtaccgcaatgagggtggtgccatggtccccatccgtgtccac 160
Query: 66 accgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgac 125
|| || |||||||| ||||||||||||||||| |||||||| || ||||| || || |||
Sbjct: 161 actgtcctcatctctacccagcacgacgagacagtcaccaatgatgagattgctgctgac 220
Query: 126 ctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagaccatc 185
|| |||||||| ||||||||||| |||||||| ||| |||||| || ||||||||||||
Sbjct: 221 ctgaaggagcatgtcatcaagcctgtcatccctgagcagtaccttgatgagaagaccatc 280
Query: 186 ttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctc 245
|||||||| ||||| || || ||||| ||||| || || || ||||| || || || ||
Sbjct: 281 ttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggtctt 340
Query: 246 accggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggcgcc 305
|| ||||| ||||||||||| |||||||| || ||||||||||||||||| || |||||
Sbjct: 341 actggccggaagatcatcattgacacctatggtggctggggagcccacggtggtggcgct 400
Query: 306 ttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggcc 365
||||||||||||||||| |||||||| |||||||| || |||||| |||| ||||||||
Sbjct: 401 ttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacatcgcaaggcaggct 460
Query: 366 gccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgcc 425
||||||||||| || |||| |||||| || |||||| | |||| ||||| |||||||||
Sbjct: 461 gccaagagcattgttgccaacggccttgctcgccgcgccatcgtccaggtctcctacgcc 520
Query: 426 atcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcccc 485
||||| ||||| ||||| || ||||| || || ||| | || |||||||| || || ||
Sbjct: 521 atcggtgtgcctgagcctctctccgtctttgttgacacgtatggcaccggcacgattcct 580
Query: 486 gacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcacc 545
|||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||| |
Sbjct: 581 gacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatcatc 640
Query: 546 atcaacctcgacctcaagaagggcggcaac 575
|||||||||||||||||||| || ||||||
Sbjct: 641 atcaacctcgacctcaagaaaggtggcaac 670
>gb|BF705281.1|BF705281 RHIZ2_3_A11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 604
Score = 406 bits (205), Expect = e-111
Identities = 241/253 (95%)
Strand = Plus / Plus
Query: 400 gctgcctcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtcg 459
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgcctcgtgcaggtctcgtacgccatcggcgtgccggagcccctgtccgtgttcgtcg 60
Query: 460 actcctacggcaccgggaccatccccgacaaggagatcctaaagatcgtcaaggagaact 519
|||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 61 actcgtacggcaccgggagcatcccggacaaggagatcctcaagatcgtcaaggagaact 120
Query: 520 tcgacttcaggccagggatgatcaccatcaacctcgacctcaagaagggcggcaacaggt 579
||||||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 121 tcgacttcaggcccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacaggt 180
Query: 580 tcatcaagaccgccgcatacggccactttggccgtgacgacgccgacttcacctgggagg 639
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcatcaagaccgccgcctacggccactttggccgtgacgacgccgacttcacctgggagg 240
Query: 640 tggtcaagcccct 652
|||| ||||||||
Sbjct: 241 tggtgaagcccct 253
Score = 137 bits (69), Expect = 2e-030
Identities = 151/173 (87%), Gaps = 14/173 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 446 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 501
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 502 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 553
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagt 1030
||||| |||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 554 tttttttcttccccttttcgagtctgtact-aaactgct-agagatttgcagt 604
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 320 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 379
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 380 ctcctggatgtgtgtttgatcagtgactggctgctc 415
>gb|BG103632.1|BG103632 RHIZ2_38_H12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 668
Score = 404 bits (204), Expect = e-111
Identities = 240/252 (95%)
Strand = Plus / Plus
Query: 401 ctgcctcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtcga 460
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcctcgtgcaggtctcgtacgccatcggcgtgccggagcccctgtccgtgttcgtcga 60
Query: 461 ctcctacggcaccgggaccatccccgacaaggagatcctaaagatcgtcaaggagaactt 520
||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 61 ctcgtacggcaccgggagcatcccggacaaggagatcctcaagatcgtcaaggagaactt 120
Query: 521 cgacttcaggccagggatgatcaccatcaacctcgacctcaagaagggcggcaacaggtt 580
|||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 121 cgacttcaggcccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacaggtt 180
Query: 581 catcaagaccgccgcatacggccactttggccgtgacgacgccgacttcacctgggaggt 640
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcaagaccgccgcctacggccactttggccgtgacgacgccgacttcacctgggaggt 240
Query: 641 ggtcaagcccct 652
||| ||||||||
Sbjct: 241 ggtgaagcccct 252
Score = 170 bits (86), Expect = 2e-040
Identities = 164/186 (88%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 445 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 500
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 501 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 552
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 553 tttttttcttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 612
Query: 1037 ctatca 1042
||||||
Sbjct: 613 ctatca 618
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 319 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 378
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 379 ctcctggatgtgtgtttgatcagtgactggctgctc 414
>gb|BF588420.1|BF588420 FM1_36_D10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 591
Score = 396 bits (200), Expect = e-108
Identities = 239/252 (94%)
Strand = Plus / Plus
Query: 401 ctgcctcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtcga 460
|||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcttcgtgcaggtctcgtacgccatcggcgtgccggagcccctgtccgtgttcgtcga 60
Query: 461 ctcctacggcaccgggaccatccccgacaaggagatcctaaagatcgtcaaggagaactt 520
||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 61 ctcgtacggcaccgggagcatcccggacaaggagatcctcaagatcgtcaaggagaactt 120
Query: 521 cgacttcaggccagggatgatcaccatcaacctcgacctcaagaagggcggcaacaggtt 580
|||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 121 cgacttcaggcccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacaggtt 180
Query: 581 catcaagaccgccgcatacggccactttggccgtgacgacgccgacttcacctgggaggt 640
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcaagaccgccgcctacggccactttggccgtgacgacgccgacttcacctgggaggt 240
Query: 641 ggtcaagcccct 652
||| ||||||||
Sbjct: 241 ggtgaagcccct 252
Score = 127 bits (64), Expect = 2e-027
Identities = 139/160 (86%), Gaps = 13/160 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 445 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 500
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 501 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 552
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctg 1017
||||| | | |||||||||||||||||||||||||||||
Sbjct: 553 -tttttttcttcccttttcgagtctgtactgaaactgctg 591
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 319 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 378
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 379 ctcctggatgtgtgtttgatcagtgactggctgctc 414
>gb|BM323774.1|BM323774 PIC1_23_C05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 540
Score = 391 bits (197), Expect = e-106
Identities = 434/513 (84%)
Strand = Plus / Plus
Query: 63 cacaccgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgcc 122
||||| || |||||||| ||||||||||||||||| |||||||| || ||||| || ||
Sbjct: 12 cacactgtcctcatctctacccagcacgacgagacagtcaccaatgatgagattgctgct 71
Query: 123 gacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagacc 182
||||| |||||||| ||||||||||| |||||||| ||| |||||| || |||||||||
Sbjct: 72 gacctgaaggagcatgtcatcaagcctgtcatccctgagcagtaccttgatgagaagacc 131
Query: 183 atcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggc 242
||||||||||| ||||| || || ||||| ||||| || || || ||||| || || ||
Sbjct: 132 atcttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggt 191
Query: 243 ctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggc 302
|| || ||||| ||||||||||| |||||||| || ||||||||||||||||| || |||
Sbjct: 192 cttactggccggaagatcatcattgacacctatggtggctggggagcccacggtggtggc 251
Query: 303 gccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcag 362
|| ||||||||||||||||| |||||||| |||||||| || |||||| |||| ||||||
Sbjct: 252 gctttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacatcgcaaggcag 311
Query: 363 gccgccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctac 422
|| ||||||||||| || |||| |||||| || |||||| | |||| ||||| ||||||
Sbjct: 312 gctgccaagagcattgttgccaacggccttgctcgccgcgccatcgtccaggtctcctac 371
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
|||||||| ||||| ||||| || ||||| || || ||| | || |||||||| || ||
Sbjct: 372 gccatcggtgtgcctgagcctctctccgtctttgttgacacgtatggcaccggcacgatt 431
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 432 cctgacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatc 491
Query: 543 accatcaacctcgacctcaagaagggcggcaac 575
| ||||||||||||||||||||| || ||||||
Sbjct: 492 atcatcaacctcgacctcaagaaaggtggcaac 524
>gb|AW565869.1|AW565869 LG1_352_G11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 617
Score = 389 bits (196), Expect = e-106
Identities = 226/236 (95%)
Strand = Plus / Plus
Query: 417 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccggg 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccggg 62
Query: 477 accatccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccaggg 536
| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 63 agcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggc 122
Query: 537 atgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgca 596
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 123 atgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcc 182
Query: 597 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 183 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 238
Score = 129 bits (65), Expect = 6e-028
Identities = 153/176 (86%), Gaps = 16/176 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 440 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 495
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| |||| ||
Sbjct: 496 accaggatt-atgcgctgatc-tttatcttt-----tagtttgg--tcgtccagtat-tt 545
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ttttttctt--cccctttcgagtctgtactgaaactgctgagagatttgcagtttt 599
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 357 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 409
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 314 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 373
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 374 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 418
>gb|BE362016.1|BE362016 DG1_83_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 389 bits (196), Expect = e-106
Identities = 226/236 (95%)
Strand = Plus / Plus
Query: 417 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccggg 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccggg 61
Query: 477 accatccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccaggg 536
| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 62 agcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggc 121
Query: 537 atgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgca 596
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 122 atgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcc 181
Query: 597 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 237
Score = 137 bits (69), Expect = 2e-030
Identities = 154/176 (87%), Gaps = 16/176 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 439 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 494
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 495 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 545
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 -tttttctt--cccttttcgagtctgtactgaaactgctgagagatttgcagtttt 598
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 356 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 408
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 313 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 372
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 373 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 417
>gb|BF587600.1|BF587600 FM1_38_D12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 666
Score = 389 bits (196), Expect = e-106
Identities = 234/247 (94%)
Strand = Plus / Plus
Query: 406 tcgtgcaggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcct 465
|||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 2 tcgtgcaggtctcgtacgccatcggcgtgcnggagcccctgtccgtgttcgtcgactcgt 61
Query: 466 acggcaccgggaccatccccgacaaggagatcctaaagatcgtcaaggagaacttcgact 525
|||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 62 acggcaccgggagcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgact 121
Query: 526 tcaggccagggatgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatca 585
||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 122 tcaggcccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatca 181
Query: 586 agaccgccgcatacggccactttggccgtgacgacgccgacttcacctgggaggtggtca 645
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 182 agaccgccgcctacggccactttggccgtgacgacgccgacttcacctgggaggtggtga 241
Query: 646 agcccct 652
|||||||
Sbjct: 242 agcccct 248
Score = 163 bits (82), Expect = 4e-038
Identities = 163/186 (87%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 441 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 496
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| |||||||
Sbjct: 497 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtcctgtatctt 548
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 549 tttttttcttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 608
Query: 1037 ctatca 1042
||||||
Sbjct: 609 ctatca 614
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 315 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 374
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 375 ctcctggatgtgtgtttgatcagtgactggctgctc 410
>gb|BG464622.1|BG464622 EM1_72_A05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 389 bits (196), Expect = e-106
Identities = 226/236 (95%)
Strand = Plus / Plus
Query: 417 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccggg 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccggg 60
Query: 477 accatccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccaggg 536
| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 61 agcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggc 120
Query: 537 atgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgca 596
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 121 atgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcc 180
Query: 597 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 236
Score = 85.7 bits (43), Expect = 8e-015
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 438 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 493
Query: 918 gccaggattaatgcgctggtcttt 941
|||||||| |||||||| |||||
Sbjct: 494 accaggatt-atgcgctgatcttt 516
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 355 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 407
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 312 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 371
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 372 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 416
>gb|BI351060.1|BI351060 IP1_69_C12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 537
Score = 389 bits (196), Expect = e-106
Identities = 226/236 (95%)
Strand = Plus / Plus
Query: 417 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccggg 476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 tcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccggg 61
Query: 477 accatccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccaggg 536
| |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 62 agcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggc 121
Query: 537 atgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgca 596
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 122 atgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcc 181
Query: 597 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 tacggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 237
Score = 85.7 bits (43), Expect = 8e-015
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 439 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 494
Query: 918 gccaggattaatgcgctggtcttt 941
|||||||| |||||||| |||||
Sbjct: 495 accaggatt-atgcgctgatcttt 517
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 356 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 408
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 313 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 372
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 373 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 417
>gb|BE363728.1|BE363728 WS1_69_D09.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 606
Score = 387 bits (195), Expect = e-105
Identities = 230/242 (95%)
Strand = Plus / Plus
Query: 411 caggtgtcctacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggc 470
||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 caggtctcntacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggc 60
Query: 471 accgggaccatccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcagg 530
||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 accgggagcatcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcagg 120
Query: 531 ccagggatgatcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagacc 590
|| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 121 cccggcatgatcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagacc 180
Query: 591 gccgcatacggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagccc 650
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 gccgcctacggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagccc 240
Query: 651 ct 652
||
Sbjct: 241 ct 242
Score = 129 bits (65), Expect = 6e-028
Identities = 155/177 (87%), Gaps = 16/177 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 444 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 499
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| |||| ||
Sbjct: 500 accaggatt-atgcgctgatc-tttatcttt-----tagtttgg--tcgtccagtat-tt 549
Query: 978 atttttctttccccttttc-gagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttttttc-ttccccttttcagagtctgtactgaaactgctgagagatttgcagtttt 605
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 413
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 318 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 377
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 378 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 422
>gb|BE595755.1|BE595755 PI1_54_E02.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 352
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 6 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 65
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 66 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 125
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 126 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 185
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 186 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 238
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc 733
|||||| |||||||||||||||||||||
Sbjct: 314 atcttcctctggctctgctgatacctgc 341
>gb|BG051706.1|BG051706 FM1_60_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 551
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 2 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 61
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 62 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 121
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 122 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 181
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 234
Score = 91.7 bits (46), Expect = 1e-016
Identities = 81/91 (89%), Gaps = 5/91 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 427 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 482
Query: 918 gccaggattaatgcgctggtcttttatcttt 948
|||||||| |||||||| || |||||||||
Sbjct: 483 accaggatt-atgcgctgatcatttatcttt 512
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 301 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 360
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 361 ctcctggatgtgtgtttgatcagtgactggctgctc 396
>gb|BG487885.1|BG487885 RHIZ2_60_E11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 624
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 8 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 67
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 68 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 127
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 128 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 187
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 188 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 240
Score = 163 bits (82), Expect = 4e-038
Identities = 164/186 (88%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 433 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 488
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||| ||
Sbjct: 489 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatttt 540
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 541 ttttttc-ttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 599
Query: 1037 ctatca 1042
||||||
Sbjct: 600 ctatca 605
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 307 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 366
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 367 ctcctggatgtgtgtttgatcagtgactggctgctc 402
>gb|BG488037.1|BG488037 RHIZ2_62_D10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 618
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 2 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 61
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 62 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 121
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 122 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 181
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 234
Score = 163 bits (82), Expect = 4e-038
Identities = 164/186 (88%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 427 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 482
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||| ||
Sbjct: 483 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatttt 534
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 535 ttttttc-ttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 593
Query: 1037 ctatca 1042
||||||
Sbjct: 594 ctatca 599
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 301 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 360
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 361 ctcctggatgtgtgtttgatcagtgactggctgctc 396
>gb|BG488043.1|BG488043 RHIZ2_62_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 655
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 2 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 61
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 62 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 121
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 122 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 181
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 182 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 234
Score = 155 bits (78), Expect = 1e-035
Identities = 163/186 (87%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 427 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 482
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 483 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 534
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 535 tttttttcttcccc-tttcgagtctgtactgaaactgctgagagattttgcagttttaat 593
Query: 1037 ctatca 1042
||||||
Sbjct: 594 ctatca 599
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 301 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 360
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 361 ctcctggatgtgtgtttgatcagtgactggctgctc 396
>gb|BG488044.1|BG488044 RHIZ2_62_E08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 660
Score = 383 bits (193), Expect = e-104
Identities = 223/233 (95%)
Strand = Plus / Plus
Query: 420 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacc 479
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 8 tacgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagc 67
Query: 480 atccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatg 539
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 68 atcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatg 127
Query: 540 atcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatac 599
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 128 atcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctac 187
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 188 ggccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 240
Score = 155 bits (78), Expect = 1e-035
Identities = 163/186 (87%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 433 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 488
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 489 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 540
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 541 tttttttcttcccc-tttcgagtctgtactgaaactgctgagagattttgcagttttaat 599
Query: 1037 ctatca 1042
||||||
Sbjct: 600 ctatca 605
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 307 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 366
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 367 ctcctggatgtgtgtttgatcagtgactggctgctc 402
>gb|BG241448.1|BG241448 RHIZ2_49_C09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 601
Score = 381 bits (192), Expect = e-103
Identities = 222/232 (95%)
Strand = Plus / Plus
Query: 421 acgccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggacca 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1 acgccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagca 60
Query: 481 tccccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatga 540
|||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 61 tcccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatga 120
Query: 541 tcaccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacg 600
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 121 tcaccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacg 180
Query: 601 gccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gccactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 232
Score = 170 bits (86), Expect = 2e-040
Identities = 164/186 (88%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 425 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 480
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 481 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 532
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttgat 1036
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 533 tttttttcttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaat 592
Query: 1037 ctatca 1042
||||||
Sbjct: 593 ctatca 598
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 299 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 358
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 359 ctcctggatgtgtgtttgatcagtgactggctgctc 394
>gb|CN146878.1|CN146878 WOUND1_44_H11.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_44_H11_A002 3', mRNA sequence
Length = 811
Score = 379 bits (191), Expect = e-103
Identities = 448/533 (84%), Gaps = 3/533 (0%)
Strand = Plus / Plus
Query: 123 gacctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagacc 182
||||| |||||||| ||||||||||| |||||||| ||| |||||| ||||||||||||
Sbjct: 18 gacctgaaggagcatgtcatcaagcctgtcatccctgagcagtaccttgacgagaagacc 77
Query: 183 atcttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggc 242
||||||||||| ||||| || || ||||| ||||| || || || ||||| || || ||
Sbjct: 78 atcttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggt 137
Query: 243 ctcaccggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggc 302
|| || ||||| ||||||||||| |||||||| || ||||||||||||||||| || |||
Sbjct: 138 cttactggccggaagatcatcattgacacctatggtggctggggagcccacggtggtggc 197
Query: 303 gccttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcag 362
|| ||||||||||||||||| |||||||| |||||||| || |||||| |||| ||||||
Sbjct: 198 gctttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacatcgcaaggcag 257
Query: 363 gccgccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctac 422
|| ||||||||||| || |||| |||||| || |||||| | |||| ||||| ||||||
Sbjct: 258 gctgccaagagcattgttgccaacggccttgctcgccgcgccatcgtccaggtctcctac 317
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
|||||||| ||||| ||||| || ||||| || || ||| | || ||| |||| || ||
Sbjct: 318 gccatcggtgtgcctgagcctctctccgtctttgttgacacgtatggcgccggcacgatt 377
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| ||||| || ||||||||||| ||||||||||| || ||||||
Sbjct: 378 cctgacaaggagatcctcaagattgtgaaggagaactttgacttcaggcctggcatgatc 437
Query: 543 accatcaacctcgacctcaagaagggcggcaacagg---ttcatcaagaccgccgcatac 599
| ||||||||||||||||||||| || |||||| || | | ||||||| || || |||
Sbjct: 438 atcatcaacctcgacctcaagaaaggtggcaacgggcgctacctcaagacggcggcctac 497
Query: 600 ggccactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||| | |||||| | |||||||||||||||||||| ||||||||
Sbjct: 498 ggccactttggaagggacgaccctgacttcacctgggaggtggtgaagcccct 550
>gb|AW924448.1|AW924448 WS1_69_D09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 621
Score = 377 bits (190), Expect = e-102
Identities = 220/230 (95%)
Strand = Plus / Plus
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 1 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatc 60
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 61 ccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatc 120
Query: 543 accatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggc 602
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 121 accatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggc 180
Query: 603 cactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 230
Score = 143 bits (72), Expect = 4e-032
Identities = 155/176 (88%), Gaps = 15/176 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 432 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 487
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 488 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 538
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 -tttttctt-ccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 592
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 349 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 401
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 306 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 365
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 366 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 410
>gb|BE361348.1|BE361348 DG1_71_C10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 502
Score = 377 bits (190), Expect = e-102
Identities = 220/230 (95%)
Strand = Plus / Plus
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 1 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatc 60
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 61 ccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatc 120
Query: 543 accatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggc 602
||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 121 accatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggc 180
Query: 603 cactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 230
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 349 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 401
Score = 73.8 bits (37), Expect = 3e-011
Identities = 62/70 (88%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||
Sbjct: 431 agcaagccatgtcggcgcc----gccggattagggattggtataatttggtgtggcagca 486
Query: 918 gccaggatta 927
|||||||||
Sbjct: 487 accaggatta 496
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 306 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 365
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 366 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 410
>gb|BG948232.1|BG948232 IP1_10_H10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 620
Score = 375 bits (189), Expect = e-102
Identities = 219/229 (95%)
Strand = Plus / Plus
Query: 424 ccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcc 483
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcc 60
Query: 484 ccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatca 543
| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 61 cggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatca 120
Query: 544 ccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggcc 603
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 121 ccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggcc 180
Query: 604 actttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 actttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 229
Score = 143 bits (72), Expect = 4e-032
Identities = 155/176 (88%), Gaps = 15/176 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 431 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 486
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 487 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 537
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 -tttttctt-ccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 591
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 348 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 400
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 305 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 364
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 365 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 409
>gb|BE359096.1|BE359096 DG1_38_G05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 582
Score = 373 bits (188), Expect = e-101
Identities = 218/228 (95%)
Strand = Plus / Plus
Query: 425 catcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccc 484
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 1 catcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatccc 60
Query: 485 cgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcac 544
|||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 61 ggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcac 120
Query: 545 catcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggcca 604
||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 catcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggcca 180
Query: 605 ctttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 ctttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 228
Score = 123 bits (62), Expect = 4e-026
Identities = 147/169 (86%), Gaps = 16/169 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 430 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 485
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| |||| ||
Sbjct: 486 accaggatt-atgcgctgatc-tttatcttt-----tagtttgg--tcgtccagtat-tt 535
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttg 1026
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttttttctt--cccttttcgagtctgtactgaaactgctgagagatttg 582
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 347 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 399
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 304 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 363
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 364 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 408
>gb|BG049734.1|BG049734 EM1_8_E10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 373 bits (188), Expect = e-101
Identities = 218/228 (95%)
Strand = Plus / Plus
Query: 425 catcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccc 484
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 1 catcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatccc 60
Query: 485 cgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcac 544
|||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 61 ggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcac 120
Query: 545 catcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggcca 604
||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 catcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggcca 180
Query: 605 ctttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 ctttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 228
Score = 143 bits (72), Expect = 4e-032
Identities = 155/176 (88%), Gaps = 15/176 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 430 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 485
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 486 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 536
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 -tttttctt-ccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 590
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 347 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 399
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 304 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 363
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 364 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 408
>gb|BG054111.1|BG054111 OV2_3_F05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 598
Score = 369 bits (186), Expect = e-100
Identities = 219/230 (95%)
Strand = Plus / Plus
Query: 423 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatc 482
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 1 gccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatc 60
Query: 483 cccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatc 542
|| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 61 ccggacaaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatc 120
Query: 543 accatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggc 602
||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 121 accatcaacctcgacttgaagaaaggcggcaacaggttcatcaagaccgccgcctacggc 180
Query: 603 cactttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cactttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 230
Score = 129 bits (65), Expect = 6e-028
Identities = 153/176 (86%), Gaps = 16/176 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 432 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 487
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| |||| ||
Sbjct: 488 accaggatt-atgcgctgatc-tttatcttt-----tagtttgg--tcgtccagtat-tt 537
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttttttctt--cccctttcgagtctgtactgaaactgctgagagatttgcagtttt 591
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 349 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 401
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 306 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 365
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 366 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 410
>gb|BG054036.1|BG054036 OV2_1_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 567
Score = 367 bits (185), Expect = 1e-099
Identities = 218/229 (95%)
Strand = Plus / Plus
Query: 424 ccatcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcc 483
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ccatcggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcc 60
Query: 484 ccgacaaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatca 543
| |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 61 cggacaaggagatcctcaagatcgtcaaggagaactttgacttcaggcccggcatgatca 120
Query: 544 ccatcaacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggcc 603
|||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 121 ccatcaacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggcc 180
Query: 604 actttggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 actttggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 229
Score = 85.7 bits (43), Expect = 8e-015
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 431 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 486
Query: 918 gccaggattaatgcgctggtcttt 941
|||||||| |||||||| |||||
Sbjct: 487 accaggatt-atgcgctgatcttt 509
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 348 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 400
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 305 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 364
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 365 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 409
>gb|BG357443.1|BG357443 OV2_29_H10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 651
Score = 367 bits (185), Expect = 1e-099
Identities = 215/225 (95%)
Strand = Plus / Plus
Query: 428 cggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccga 487
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||
Sbjct: 1 cggcgtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccgga 60
Query: 488 caaggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccat 547
|||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 61 caaggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccat 120
Query: 548 caacctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactt 607
|||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 caacctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactt 180
Query: 608 tggccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 tggccgtgacgacgccgacttcacctgggaggtggtgaagcccct 225
Score = 137 bits (69), Expect = 2e-030
Identities = 154/176 (87%), Gaps = 16/176 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 427 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 482
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 483 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 533
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 -tttttctt--cccttttcgagtctgtactgaaactgctgagagatttgcagtttt 586
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 344 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 396
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 301 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 360
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 ctcctggatgtgtgtttgatcagtgactggctgctc-----catagaaga 405
>gb|CW792371.1|CW792371 SP__Ba0092B22.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0092B22 3', DNA sequence
Length = 710
Score = 359 bits (181), Expect = 3e-097
Identities = 478/573 (83%), Gaps = 3/573 (0%)
Strand = Plus / Plus
Query: 6 acccaggtgacggtggagtacgtgaacgagggcggcgccatggtgcccgtccgcgtgcac 65
||||||||||| || |||||| || ||||| || |||||||| ||| |||| || |||
Sbjct: 61 acccaggtgacagttgagtaccgcaatgagggtggtgccatggtccccatccgtgtccac 120
Query: 66 accgtgctcatctccacccagcacgacgagaccgtcaccaacgacgagatcgccgccgac 125
|| || |||||||| |||||||| |||||||| |||||||| || ||||| || || |||
Sbjct: 121 actgtcctcatctctacccagcatgacgagacagtcaccaatgatgagattgctgctgac 180
Query: 126 ctcaaggagcacgtcatcaagcccgtcatcccggagaggtacctggacgagaagaccatc 185
|| |||||||| ||||||||||| |||||||| ||| |||||| || ||||||||||||
Sbjct: 181 ctgaaggagcatgtcatcaagcctgtcatccctgagcagtaccttgatgagaagaccatc 240
Query: 186 ttccacctcaacccgtcggggcgcttcgtcatcggcgggccccacggggacgccggcctc 245
|||||||| ||||| || || ||||| ||||| || || || ||||| || || || |||
Sbjct: 241 ttccaccttaacccatctggtcgctttgtcattggtggacctcacggtgatgctggtctc 300
Query: 246 accggccgcaagatcatcatcgacacctacggcggctggggagcccacggcgggggcgcc 305
|| ||||| ||||||||||| |||||||| || |||||||||||||| || || |||||
Sbjct: 301 actggccggaagatcatcattgacacctatggtggctggggagcccatggtggtggcgct 360
Query: 306 ttctccggcaaggaccccaccaaggtggaccgcagcggggcctacgtcgccaggcaggcc 365
||||||||||||||||| |||||||| |||||||| || |||||| | || ||||||||
Sbjct: 361 ttctccggcaaggacccaaccaaggtcgaccgcagtggagcctacattgcaaggcaggct 420
Query: 366 gccaagagcatcgtggccagcggcctcgcccgccgctgcctcgtgcaggtgtcctacgcc 425
||||||||||| || |||| |||||| || |||||| | | || ||||| |||||||||
Sbjct: 421 gccaagagcattgttgccaacggccttgctcgccgcgccattgttcaggtctcctacgcc 480
Query: 426 atcggcgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatcccc 485
||||| ||||| ||||| || ||||| || || ||| | ||||||||||| || || |||
Sbjct: 481 atcggtgtgcctgagcctctctccgtctttgttgacacatacggcaccggcacgattccc 540
Query: 486 gacaaggagatcctaaagatcgtcaaggagaac-ttcgacttcaggccagggatgatcac 544
|||||||||||||| ||||| || ||||||||| || ||||||||||| || |||||||
Sbjct: 541 gacaaggagatcctcaagattgtgaaggagaacttttgacttcaggcctggcatgatcat 600
Query: 545 catcaa-cctcg-acctcaagaagggcggcaac 575
|||||| ||||| |||||||||| || ||||||
Sbjct: 601 catcaaccctcgaacctcaagaaaggtggcaac 633
>gb|BG412489.1|BG412489 OV2_35_A01.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 539
Score = 359 bits (181), Expect = 3e-097
Identities = 211/221 (95%)
Strand = Plus / Plus
Query: 432 gtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaag 491
|||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct: 1 gtgccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaag 60
Query: 492 gagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaac 551
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 61 gagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaac 120
Query: 552 ctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttggc 611
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 ctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttggc 180
Query: 612 cgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cgtgacgacgccgacttcacctgggaggtggtgaagcccct 221
Score = 85.7 bits (43), Expect = 8e-015
Identities = 75/84 (89%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 423 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 478
Query: 918 gccaggattaatgcgctggtcttt 941
|||||||| |||||||| |||||
Sbjct: 479 accaggatt-atgcgctgatcttt 501
Score = 73.8 bits (37), Expect = 3e-011
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || |||||||||||||| |||||||||||||||||||
Sbjct: 340 tgctgctgctgctcctgctcctggatgtgtgttggatcagtgactggctgctc 392
Score = 65.9 bits (33), Expect = 7e-009
Identities = 91/110 (82%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 297 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 356
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 357 ctcctggatgtgtgttggatcagtgactggctgctc-----catagaaga 401
>gb|AW922487.1|AW922487 DG1_19_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 565
Score = 353 bits (178), Expect = 2e-095
Identities = 211/222 (95%)
Strand = Plus / Plus
Query: 431 cgtgccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaa 490
||||||||||||||||||||||||||||||||| | ||||||||||| |||||| |||||
Sbjct: 1 cgtgccggagcccctgtccgtgttcgtcgactcgtccggcaccgggagcatcccggacaa 60
Query: 491 ggagatcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaa 550
||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 61 ggagatcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaa 120
Query: 551 cctcgacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttgg 610
||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 cctcgacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttgg 180
Query: 611 ccgtgacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 ccgtgacgacgccgacttcacctgggaggtggtgaagcccct 222
Score = 87.7 bits (44), Expect = 2e-015
Identities = 126/148 (85%), Gaps = 14/148 (9%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 424 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 479
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| |||||| ||| ||
Sbjct: 480 accaggatt-atgcgctgatc-tttatcttt-----tagtttgg--tcgtccagtaattt 530
Query: 978 atttttctttccccttttcgagtctgta 1005
|||||| ||||||||||||||||||||
Sbjct: 531 ttttttc-ttccccttttcgagtctgta 557
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 341 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 393
Score = 73.8 bits (37), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 14/110 (12%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||||| || ||||
Sbjct: 298 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctgctgctcctg 357
Query: 763 ------gatgtgtgtttgatcagtgactggctgctctgctccatagaaga 806
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 358 ctcctggatgtgtgtttgatcagtgactggctgct-----ccatagaaga 402
>gb|BG049985.1|BG049985 FM1_68_H11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 604
Score = 353 bits (178), Expect = 2e-095
Identities = 208/218 (95%)
Strand = Plus / Plus
Query: 435 ccggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaaggag 494
||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 1 ccggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaaggag 60
Query: 495 atcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaacctc 554
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 61 atcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaacctc 120
Query: 555 gacctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttggccgt 614
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 gacctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttggccgt 180
Query: 615 gacgacgccgacttcacctgggaggtggtcaagcccct 652
||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gacgacgccgacttcacctgggaggtggtgaagcccct 218
Score = 165 bits (83), Expect = 1e-038
Identities = 165/187 (88%), Gaps = 14/187 (7%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 411 agcaagccatgtcggcgcc----gccggcttagggattggtataatttggtgtggcagca 466
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
|||||||| |||||||| || ||||||||| |||||||| ||||||||||||||
Sbjct: 467 accaggatt-atgcgctgatcatttatcttt-----tagtttgg--tcgtccggtatctt 518
Query: 978 atttttct-ttccccttttcgagtctgtactgaaactgctgagaga-tttgcagttttga 1035
||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 519 ttttttttcttccccttttcgagtctgtactgaaactgctgagagattttgcagttttaa 578
Query: 1036 tctatca 1042
|||||||
Sbjct: 579 tctatca 585
Score = 77.8 bits (39), Expect = 2e-012
Identities = 82/96 (85%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 706 atcttcgtctggctctgctgatacctgc---aaggattgctgctgctgctgccgcccctg 762
|||||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||
Sbjct: 285 atcttcctctggctctgctgatacctgctgcaagcattgctgctgctgctcctgctcctg 344
Query: 763 ------gatgtgtgtttgatcagtgactggctgctc 792
||||||||||||||||||||||||||||||
Sbjct: 345 ctcctggatgtgtgtttgatcagtgactggctgctc 380
>gb|BI140366.1|BI140366 IP1_52_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 351 bits (177), Expect = 9e-095
Identities = 207/217 (95%)
Strand = Plus / Plus
Query: 436 cggagcccctgtccgtgttcgtcgactcctacggcaccgggaccatccccgacaaggaga 495
|||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||
Sbjct: 1 cggagcccctgtccgtgttcgtcgactcgtacggcaccgggagcatcccggacaaggaga 60
Query: 496 tcctaaagatcgtcaaggagaacttcgacttcaggccagggatgatcaccatcaacctcg 555
|||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 61 tcctcaagatcgtcaaggagaacttcgacttcaggcccggcatgatcaccatcaacctcg 120
Query: 556 acctcaagaagggcggcaacaggttcatcaagaccgccgcatacggccactttggccgtg 615
|||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 acctgaagaaaggcggcaacaggttcatcaagaccgccgcctacggccactttggccgtg 180
Query: 616 acgacgccgacttcacctgggaggtggtcaagcccct 652
|||||||||||||||||||||||||||| ||||||||
Sbjct: 181 acgacgccgacttcacctgggaggtggtgaagcccct 217
Score = 143 bits (72), Expect = 4e-032
Identities = 155/176 (88%), Gaps = 15/176 (8%)
Strand = Plus / Plus
Query: 858 agcaagccatgtcggcgccactgaccggcttagtgattggtataatttggtgtggcagca 917
||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 391 agcaagccatgtcggcgccgc----cggcttagggattggtataatttggtgtggcagca 446
Query: 918 gccaggattaatgcgctggtcttttatctttactactagtttggtctcgtccggtatctt 977
||||||||| ||||||| ||||| |||||| |||||||||| |||| |||| ||
Sbjct: 447 accaggatta-tgcgctgatcttt-atcttt-----tagtttggtc--gtccagtatttt 497
Query: 978 atttttctttccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 1033
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 -tttttctt-ccccttttcgagtctgtactgaaactgctgagagatttgcagtttt 551
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 740 tgctgctgctgctgccgcccctggatgtgtgtttgatcagtgactggctgctc 792
||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 308 tgctgctgctgctcctgctcctggatgtgtgtttgatcagtgactggctgctc 360
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 417,719
Number of Sequences: 832831
Number of extensions: 417719
Number of successful extensions: 148486
Number of sequences better than 0.5: 276
Number of HSP's better than 0.5 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147109
Number of HSP's gapped (non-prelim): 1183
length of query: 1083
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1063
effective length of database: 474,703,049
effective search space: 504609341087
effective search space used: 504609341087
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)