BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405245.2.2
(616 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX606143.1|CX606143 ANR1_1_H06.b1_A002 Anaerobic roots S... 440 e-122
gb|CW041247.1|CW041247 104_274_10506462_114_30468 Sorghum m... 432 e-119
gb|CW041248.1|CW041248 104_274_10506462_116_30432 Sorghum m... 432 e-119
gb|CW041249.1|CW041249 104_274_10506462_116_30480 Sorghum m... 432 e-119
gb|CW441621.1|CW441621 fsbb001f160n21f0 Sorghum methylation... 432 e-119
gb|AW565625.1|AW565625 LG1_347_B05.g1_A002 Light Grown 1 (L... 432 e-119
gb|AW679715.1|AW679715 WS1_30_A07.g1_A002 Water-stressed 1 ... 432 e-119
gb|BE356388.1|BE356388 DG1_124_E09.g1_A002 Dark Grown 1 (DG... 432 e-119
gb|BE358022.1|BE358022 DG1_23_B01.g1_A002 Dark Grown 1 (DG1... 432 e-119
gb|BE358654.1|BE358654 DG1_30_F10.g1_A002 Dark Grown 1 (DG1... 432 e-119
gb|BE366419.1|BE366419 PI1_33_C11.g1_A002 Pathogen induced ... 432 e-119
gb|BE593863.1|BE593863 WS1_103_C05.g1_A002 Water-stressed 1... 432 e-119
gb|BE594909.1|BE594909 PI1_47_D08.g1_A002 Pathogen induced ... 432 e-119
gb|BF480986.1|BF480986 FM1_15_H10.g1_A003 Floral-Induced Me... 432 e-119
gb|BF586505.1|BF586505 FM1_29_A11.g1_A003 Floral-Induced Me... 432 e-119
gb|BG102056.1|BG102056 RHIZ2_24_C09.g1_A003 Rhizome2 (RHIZ2... 432 e-119
gb|BG102550.1|BG102550 RHIZ2_34_D11.g1_A003 Rhizome2 (RHIZ2... 432 e-119
gb|BG356319.1|BG356319 EM1_21_A11.g1_A002 Embryo 1 (EM1) So... 432 e-119
gb|BG488041.1|BG488041 RHIZ2_62_E05.g1_A003 Rhizome2 (RHIZ2... 432 e-119
gb|BG557601.1|BG557601 EM1_53_G10.g1_A002 Embryo 1 (EM1) So... 432 e-119
gb|BI074277.1|BI074277 IP1_13_F03.g1_A002 Immature pannicle... 432 e-119
gb|BM327844.1|BM327844 PIC1_18_B12.g1_A002 Pathogen-infecte... 432 e-119
gb|CD219947.1|CD219947 CCC1_60_H06.b1_A007 Callus culture/c... 432 e-119
gb|CD222142.1|CD222142 CCC1_2_D07.b1_A007 Callus culture/ce... 432 e-119
gb|CD222334.1|CD222334 CCC1_21_F04.b1_A007 Callus culture/c... 432 e-119
gb|CD222615.1|CD222615 CCC1_23_A08.b1_A007 Callus culture/c... 432 e-119
gb|CD224153.1|CD224153 CCC1_32_E07.b1_A007 Callus culture/c... 432 e-119
gb|CD228676.1|CD228676 CCC1_9_A02.b1_A007 Callus culture/ce... 432 e-119
gb|CD236168.1|CD236168 SS1_32_E11.b1_A012 Salt-stressed see... 432 e-119
gb|CD462131.1|CD462131 SA1_39_D04.b1_A002 Salicylic acid-tr... 432 e-119
gb|CF427565.1|CF427565 PH1_16_E09.b1_A002 Phosphorous-defic... 432 e-119
gb|CF428663.1|CF428663 PH1_17_H06.b1_A002 Phosphorous-defic... 432 e-119
gb|CF428859.1|CF428859 PH1_18_H06.b1_A002 Phosphorous-defic... 432 e-119
gb|CF434138.1|CF434138 NIT1_32_B06.b1_A002 Nitrogen-deficie... 432 e-119
gb|CF489719.1|CF489719 POL1_59_F05.b1_A002 Pollen Sorghum b... 432 e-119
gb|CF760068.1|CF760068 DSAF1_55_B03.b1_A011 Drought-stresse... 432 e-119
gb|CN133292.1|CN133292 OX1_11_G06.b1_A002 Oxidatively-stres... 432 e-119
gb|CN145285.1|CN145285 WOUND1_28_A04.b2_A002 Wounded leaves... 432 e-119
gb|CN148100.1|CN148100 WOUND1_54_E06.b1_A002 Wounded leaves... 432 e-119
gb|CX606476.1|CX606476 ANR1_3_F07.b1_A002 Anaerobic roots S... 432 e-119
gb|CX606805.1|CX606805 ANR1_5_C04.b1_A002 Anaerobic roots S... 432 e-119
gb|CX607355.1|CX607355 ANR1_8_D05.b1_A002 Anaerobic roots S... 432 e-119
gb|CX608537.1|CX608537 ANR1_39_E03.b1_A002 Anaerobic roots ... 432 e-119
gb|CX610976.1|CX610976 ANR1_22_A04.b1_A002 Anaerobic roots ... 432 e-119
gb|CX610995.1|CX610995 ANR1_22_B12.b1_A002 Anaerobic roots ... 432 e-119
gb|CX613816.1|CX613816 GABR1_10_H05.b1_A002 GA- or brassino... 432 e-119
gb|CX614086.1|CX614086 GABR1_12_A09.b1_A002 GA- or brassino... 432 e-119
gb|CX619871.1|CX619871 GABR1_48_G11.b1_A002 GA- or brassino... 432 e-119
gb|CX620937.1|CX620937 GABR1_55_A11.b1_A002 GA- or brassino... 432 e-119
gb|CX622168.1|CX622168 GABR1_62_H11.b2_A002 GA- or brassino... 432 e-119
gb|BG559680.1|BG559680 RHIZ2_72_E06.g1_A003 Rhizome2 (RHIZ2... 428 e-118
gb|CD234542.1|CD234542 SS1_14_G07.b1_A012 Salt-stressed see... 428 e-118
gb|CF433586.1|CF433586 NIT1_28_G07.b1_A002 Nitrogen-deficie... 428 e-118
gb|BE358423.1|BE358423 DG1_29_G02.g1_A002 Dark Grown 1 (DG1... 426 e-117
gb|AW672110.1|AW672110 LG1_357_G06.b1_A002 Light Grown 1 (L... 424 e-117
gb|BE356515.1|BE356515 DG1_125_E11.g1_A002 Dark Grown 1 (DG... 424 e-117
gb|BE358177.1|BE358177 DG1_24_A11.g1_A002 Dark Grown 1 (DG1... 424 e-117
gb|BG051603.1|BG051603 FM1_58_F09.g1_A003 Floral-Induced Me... 424 e-117
gb|BG273377.1|BG273377 OV2_28_H10.g1_A002 Ovary 2 (OV2) Sor... 424 e-117
gb|CD223430.1|CD223430 CCC1_28_A09.b1_A007 Callus culture/c... 424 e-117
gb|CD226156.1|CD226156 CCC1_44_A10.b1_A007 Callus culture/c... 424 e-117
gb|CD227533.1|CD227533 CCC1_52_H03.b1_A007 Callus culture/c... 424 e-117
gb|CF480852.1|CF480852 POL1_68_G07.b1_A002 Pollen Sorghum b... 424 e-117
gb|CN143733.1|CN143733 WOUND1_18_C01.b1_A002 Wounded leaves... 424 e-117
gb|CN145356.1|CN145356 WOUND1_28_A04.g1_A002 Wounded leaves... 424 e-117
gb|CX607660.1|CX607660 ANR1_30_B05.b1_A002 Anaerobic roots ... 424 e-117
gb|CX609182.1|CX609182 ANR1_11_D09.b1_A002 Anaerobic roots ... 424 e-117
gb|CX610686.1|CX610686 ANR1_20_E11.b1_A002 Anaerobic roots ... 424 e-117
gb|CX611323.1|CX611323 ANR1_24_B02.b1_A002 Anaerobic roots ... 424 e-117
gb|CX615589.1|CX615589 GABR1_21_C06.b1_A002 GA- or brassino... 424 e-117
gb|CX619540.1|CX619540 GABR1_46_D06.b1_A002 GA- or brassino... 424 e-117
gb|CX619834.1|CX619834 GABR1_48_D07.b1_A002 GA- or brassino... 424 e-117
gb|CD234910.1|CD234910 SS1_19_B06.b1_A012 Salt-stressed see... 420 e-116
gb|CF428262.1|CF428262 PH1_14_E03.b1_A002 Phosphorous-defic... 420 e-116
gb|BE357223.1|BE357223 DG1_147_B06.g1_A002 Dark Grown 1 (DG... 418 e-115
gb|CF481656.1|CF481656 POL1_73_F06.b1_A002 Pollen Sorghum b... 418 e-115
gb|CN131575.1|CN131575 OX1_1_C02.b1_A002 Oxidatively-stress... 418 e-115
gb|CN124493.1|CN124493 RHOH1_5_D08.b1_A002 Acid- and alkali... 416 e-114
gb|CX610484.1|CX610484 ANR1_19_B07.b1_A002 Anaerobic roots ... 416 e-114
gb|BF587993.1|BF587993 FM1_35_D06.g1_A003 Floral-Induced Me... 414 e-114
gb|BI098045.1|BI098045 IP1_31_D03.g1_A002 Immature pannicle... 414 e-114
gb|BG559827.1|BG559827 RHIZ2_74_B04.g1_A003 Rhizome2 (RHIZ2... 412 e-113
gb|CD225267.1|CD225267 CCC1_39_C03.b1_A007 Callus culture/c... 412 e-113
gb|CF073403.1|CF073403 FE1_10_D06.b1_A002 Iron-deficient se... 412 e-113
gb|BI076306.1|BI076306 IP1_25_E08.g1_A002 Immature pannicle... 410 e-113
gb|CX607216.1|CX607216 ANR1_7_G11.b1_A002 Anaerobic roots S... 408 e-112
gb|CX617682.1|CX617682 GABR1_35_D09.b1_A002 GA- or brassino... 408 e-112
gb|CW207638.1|CW207638 104_636_11188258_148_36970_033 Sorgh... 406 e-112
gb|BF705335.1|BF705335 RHIZ2_3_G04.g1_A003 Rhizome2 (RHIZ2)... 404 e-111
gb|CX616858.1|CX616858 GABR1_30_G12.b1_A002 GA- or brassino... 400 e-110
gb|CD228862.1|CD228862 CCC1_10_C08.b1_A007 Callus culture/c... 392 e-107
gb|DN552481.1|DN552481 pSHR-L_D09_S003 pSHR Sorghum halepen... 387 e-106
gb|BG487841.1|BG487841 RHIZ2_60_A05.g1_A003 Rhizome2 (RHIZ2... 383 e-104
gb|AW672200.1|AW672200 LG1_357_G06.g1_A002 Light Grown 1 (L... 377 e-103
gb|AW563665.1|AW563665 LG1_245_G05.b1_A002 Light Grown 1 (L... 373 e-101
gb|CX622141.1|CX622141 GABR1_62_F06.b2_A002 GA- or brassino... 357 8e-097
gb|BG239905.1|BG239905 OV1_30_E05.g1_A002 Ovary 1 (OV1) Sor... 355 3e-096
gb|CD462151.1|CD462151 SA1_39_D04.g1_A002 Salicylic acid-tr... 339 2e-091
gb|BG241396.1|BG241396 RHIZ2_51_E02.g1_A003 Rhizome2 (RHIZ2... 327 7e-088
gb|CD427520.1|CD427520 SA1_37_E07.b1_A002 Salicylic acid-tr... 319 2e-085
gb|BG102030.1|BG102030 RHIZ2_24_A04.g1_A003 Rhizome2 (RHIZ2... 309 2e-082
gb|BG559941.1|BG559941 RHIZ2_75_E11.g1_A003 Rhizome2 (RHIZ2... 309 2e-082
gb|BE362837.1|BE362837 DG1_89_E04.g2_A002 Dark Grown 1 (DG1... 303 1e-080
gb|BG465245.1|BG465245 EM1_73_G06.g1_A002 Embryo 1 (EM1) So... 301 4e-080
gb|AW564454.1|AW564454 LG1_295_C04.b1_A002 Light Grown 1 (L... 285 2e-075
gb|AW923869.1|AW923869 WS1_30_A07.b1_A002 Water-stressed 1 ... 274 9e-072
gb|BF586584.1|BF586584 FM1_29_A11.b1_A003 Floral-Induced Me... 268 6e-070
gb|BI351471.1|BI351471 IP1_72_B04.g1_A002 Immature pannicle... 240 1e-061
gb|BG052412.1|BG052412 RHIZ2_13_E02.g1_A003 Rhizome2 (RHIZ2... 238 5e-061
gb|CD222470.1|CD222470 CCC1_22_B12.b1_A007 Callus culture/c... 238 5e-061
gb|BG102511.1|BG102511 RHIZ2_34_A04.g1_A003 Rhizome2 (RHIZ2... 236 2e-060
gb|CW207637.1|CW207637 104_636_11188258_116_36975_033 Sorgh... 200 1e-049
gb|AW282503.1|AW282503 LG1_312_H05.g1_A002 Light Grown 1 (L... 186 2e-045
gb|CF428416.1|CF428416 PH1_15_D05.b1_A002 Phosphorous-defic... 182 3e-044
gb|BG487847.1|BG487847 RHIZ2_60_B02.g1_A003 Rhizome2 (RHIZ2... 178 4e-043
gb|BG947525.1|BG947525 IP1_5_E08.g1_A002 Immature pannicle ... 178 4e-043
gb|BI099378.1|BI099378 IP1_41_D03.g1_A002 Immature pannicle... 178 4e-043
gb|BG558122.1|BG558122 RHIZ2_67_B03.g1_A003 Rhizome2 (RHIZ2... 174 6e-042
gb|BI211606.1|BI211606 IP1_59_F06.g1_A002 Immature pannicle... 174 6e-042
gb|BI212012.1|BI212012 IP1_63_D02.g1_A002 Immature pannicle... 174 6e-042
gb|CD424361.1|CD424361 SA1_5_G02.b1_A002 Salicylic acid-tre... 174 6e-042
gb|CF427548.1|CF427548 PH1_16_E12.b1_A002 Phosphorous-defic... 174 6e-042
gb|BE358570.1|BE358570 DG1_31_E07.g1_A002 Dark Grown 1 (DG1... 172 2e-041
gb|BI074994.1|BI074994 IP1_18_F08.g1_A002 Immature pannicle... 170 1e-040
gb|BE601241.1|BE601241 PI1_90_F06.g1_A002 Pathogen induced ... 167 2e-039
gb|BI075545.1|BI075545 IP1_21_H04.g1_A002 Immature pannicle... 163 2e-038
gb|BI075032.1|BI075032 IP1_20_H05.g1_A002 Immature pannicle... 157 1e-036
gb|CD227625.1|CD227625 CCC1_52_H03.g1_A007 Callus culture/c... 155 6e-036
gb|CD229464.1|CD229464 CCC1_16_C05.b1_A007 Callus culture/c... 151 9e-035
gb|CW057869.1|CW057869 104_300_10518446_1_30040 Sorghum met... 133 2e-029
gb|CW057963.1|CW057963 104_300_10518494_1_30028 Sorghum met... 133 2e-029
gb|CF484290.1|CF484290 POL1_4_G12.b1_A002 Pollen Sorghum bi... 133 2e-029
gb|CF485401.1|CF485401 POL1_31_G03.b1_A002 Pollen Sorghum b... 133 2e-029
gb|BI075077.1|BI075077 IP1_20_C09.g1_A002 Immature pannicle... 131 8e-029
gb|CF486717.1|CF486717 POL1_39_G12.b1_A002 Pollen Sorghum b... 131 8e-029
gb|CN141051.1|CN141051 OX1_49_B10.b1_A002 Oxidatively-stres... 131 8e-029
gb|BG558977.1|BG558977 RHIZ2_53_A10.g1_A003 Rhizome2 (RHIZ2... 129 3e-028
gb|BI141312.1|BI141312 IP1_54_B12.g1_A002 Immature pannicle... 127 1e-027
gb|CF486258.1|CF486258 POL1_36_E04.g1_A002 Pollen Sorghum b... 127 1e-027
gb|CF485217.1|CF485217 POL1_30_D08.b1_A002 Pollen Sorghum b... 121 8e-026
gb|BI075081.1|BI075081 IP1_20_D01.g1_A002 Immature pannicle... 117 1e-024
gb|CX613255.1|CX613255 GABR1_7_D09.b1_A002 GA- or brassinol... 117 1e-024
gb|CF486176.1|CF486176 POL1_36_E04.b1_A002 Pollen Sorghum b... 115 5e-024
gb|CD227267.1|CD227267 CCC1_50_B02.b1_A007 Callus culture/c... 113 2e-023
gb|CF434304.1|CF434304 NIT1_29_F04.b1_A002 Nitrogen-deficie... 113 2e-023
gb|CF427396.1|CF427396 PH1_1_H05.b1_A002 Phosphorous-defici... 111 8e-023
gb|AI724841.1|AI724841 RHIZ1_9_H04.y2_A001 Rhizome1 (RHIZ1)... 109 3e-022
gb|AW284871.1|AW284871 LG1_295_C04.g1_A002 Light Grown 1 (L... 109 3e-022
gb|AW285474.1|AW285474 LG1_241_A08.g1_A002 Light Grown 1 (L... 109 3e-022
gb|AW923411.1|AW923411 DG1_51_F08.g1_A002 Dark Grown 1 (DG1... 109 3e-022
gb|AW923412.1|AW923412 DG1_51_F09.g1_A002 Dark Grown 1 (DG1... 109 3e-022
gb|BE356973.1|BE356973 DG1_145_D08.g1_A002 Dark Grown 1 (DG... 109 3e-022
gb|BF422206.1|BF422206 FM1_13_C09.g1_A003 Floral-Induced Me... 109 3e-022
gb|BF704986.1|BF704986 RHIZ2_1_A01.g1_A003 Rhizome2 (RHIZ2)... 109 3e-022
gb|BG101927.1|BG101927 RHIZ2_21_E11.g1_A003 Rhizome2 (RHIZ2... 109 3e-022
gb|BG103511.1|BG103511 RHIZ2_37_D11.g1_A003 Rhizome2 (RHIZ2... 109 3e-022
gb|BG556662.1|BG556662 EM1_40_A06.g1_A002 Embryo 1 (EM1) So... 109 3e-022
gb|BG605956.1|BG605956 RHIZ2_83_F10.g1_A003 Rhizome2 (RHIZ2... 109 3e-022
gb|BG947689.1|BG947689 IP1_7_H04.g1_A002 Immature pannicle ... 109 3e-022
gb|BI211776.1|BI211776 IP1_27_H04.g1_A002 Immature pannicle... 109 3e-022
gb|BI351477.1|BI351477 IP1_72_C05.g1_A002 Immature pannicle... 109 3e-022
gb|BM329714.1|BM329714 PIC1_42_F02.g1_A002 Pathogen-infecte... 109 3e-022
gb|BQ655930.1|BQ655930 pRC0108 Sorghum halepense rhizome cD... 109 3e-022
gb|CD204144.1|CD204144 HS1_4_E02.b1_A012 Heat-shocked seedl... 109 3e-022
gb|CD211139.1|CD211139 HS1_61_D01.b1_A012 Heat-shocked seed... 109 3e-022
gb|CD211447.1|CD211447 HS1_60_D01.b1_A012 Heat-shocked seed... 109 3e-022
gb|CD219708.1|CD219708 CCC1_58_B10.b1_A007 Callus culture/c... 109 3e-022
gb|CD223831.1|CD223831 CCC1_30_E11.b1_A007 Callus culture/c... 109 3e-022
gb|CD225236.1|CD225236 CCC1_39_C12.b1_A007 Callus culture/c... 109 3e-022
gb|CD225444.1|CD225444 CCC1_3_D11.b1_A007 Callus culture/ce... 109 3e-022
gb|CF757527.1|CF757527 DSAF1_19_A11.g1_A011 Drought-stresse... 109 3e-022
gb|CF758669.1|CF758669 DSAF1_35_B10.g1_A011 Drought-stresse... 109 3e-022
gb|CF770273.1|CF770273 DSBF1_6_F06.g1_A010 Drought-stressed... 109 3e-022
gb|CN131603.1|CN131603 OX1_1_E12.b1_A002 Oxidatively-stress... 109 3e-022
gb|CX609731.1|CX609731 ANR1_14_H12.b1_A002 Anaerobic roots ... 109 3e-022
gb|CX616630.1|CX616630 GABR1_29_B10.b1_A002 GA- or brassino... 109 3e-022
gb|CX622445.1|CX622445 GABR1_64_B03.b2_A002 GA- or brassino... 109 3e-022
gb|CX623011.1|CX623011 GABR1_67_F02.b1_A002 GA- or brassino... 109 3e-022
gb|BZ625779.1|BZ625779 ih40f11.b1 WGS-SbicolorF (DH5a methy... 107 1e-021
gb|CW022942.1|CW022942 104_162_10432148_1_30008 Sorghum met... 107 1e-021
gb|CW044141.1|CW044141 104_280_10508784_115_30241 Sorghum m... 107 1e-021
gb|BG558054.1|BG558054 RHIZ2_66_A08.g1_A003 Rhizome2 (RHIZ2... 105 5e-021
gb|CD432286.1|CD432286 ETH1_29_G10.b1_A002 Ethylene-treated... 103 2e-020
gb|CX608374.1|CX608374 ANR1_38_F06.b1_A002 Anaerobic roots ... 103 2e-020
gb|AW745024.1|AW745024 LG1_385_F02.g1_A002 Light Grown 1 (L... 101 7e-020
gb|CD233757.1|CD233757 SS1_4_H03.b1_A012 Salt-stressed seed... 101 7e-020
gb|CF760990.1|CF760990 DSAF1_69_F03.b1_A011 Drought-stresse... 98 1e-018
gb|BF655923.1|BF655923 FM1_42_E11.g1_A003 Floral-Induced Me... 94 2e-017
gb|BG054108.1|BG054108 OV2_3_F02.g1_A002 Ovary 2 (OV2) Sorg... 90 3e-016
gb|BI075614.1|BI075614 IP1_22_H09.g1_A002 Immature pannicle... 90 3e-016
gb|CW453811.1|CW453811 fsbb001f197p15f0 Sorghum methylation... 86 4e-015
gb|BG558068.1|BG558068 RHIZ2_66_C03.g1_A003 Rhizome2 (RHIZ2... 86 4e-015
gb|BI075644.1|BI075644 IP1_23_C07.g1_A002 Immature pannicle... 86 4e-015
gb|BI099644.1|BI099644 IP1_44_H05.g1_A002 Immature pannicle... 86 4e-015
gb|BI139524.1|BI139524 IP1_45_C10.g1_A002 Immature pannicle... 84 2e-014
gb|BG558521.1|BG558521 RHIZ2_56_H01.g1_A003 Rhizome2 (RHIZ2... 78 1e-012
gb|BM317679.1|BM317679 LG1_245_G05.g1_A002 Light Grown 1 (L... 78 1e-012
gb|BG052404.1|BG052404 RHIZ2_13_D03.g1_A003 Rhizome2 (RHIZ2... 74 2e-011
gb|BE359252.1|BE359252 DG1_39_E08.g1_A002 Dark Grown 1 (DG1... 70 3e-010
gb|BF587357.1|BF587357 FM1_35_D06.b1_A003 Floral-Induced Me... 70 3e-010
gb|BG559563.1|BG559563 RHIZ2_69_A01.g1_A003 Rhizome2 (RHIZ2... 54 2e-005
gb|CW173472.1|CW173472 104_585_11156865_148_36555_045 Sorgh... 52 6e-005
gb|BG239856.1|BG239856 OV1_29_H08.g1_A002 Ovary 1 (OV1) Sor... 46 0.004
>gb|CX606143.1|CX606143 ANR1_1_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_H06_A002 3', mRNA sequence
Length = 744
Score = 440 bits (222), Expect = e-122
Identities = 268/282 (95%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 171 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 230
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 290
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 291 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggccgcaac 350
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 410
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 452
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 571 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 630
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 631 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 687
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 688 ggttgtaccctggacctgctatagccggttgattcttcaa 727
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 469 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 523
>gb|CW041247.1|CW041247 104_274_10506462_114_30468 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 574
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 215 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 274
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 334
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 335 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 394
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 454
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 496
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 513 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 567
>gb|CW041248.1|CW041248 104_274_10506462_116_30432 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 661
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 602 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 543
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 483
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 482 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 423
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 363
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 321
Score = 127 bits (64), Expect = 1e-027
Identities = 172/205 (83%), Gaps = 11/205 (5%)
Strand = Plus / Minus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 202 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 143
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 142 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 86
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 85 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 29
Query: 553 aaagttactacacgatcgatatgtt 577
|||||||||| ||||||||||||||
Sbjct: 28 aaagttactatacgatcgatatgtt 4
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 304 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 250
>gb|CW041249.1|CW041249 104_274_10506462_116_30480 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506462, DNA
sequence
Length = 667
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 602 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 543
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 483
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 482 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 423
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 363
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 321
Score = 127 bits (64), Expect = 1e-027
Identities = 172/205 (83%), Gaps = 11/205 (5%)
Strand = Plus / Minus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 202 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 143
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 142 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 86
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 85 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 29
Query: 553 aaagttactacacgatcgatatgtt 577
|||||||||| ||||||||||||||
Sbjct: 28 aaagttactatacgatcgatatgtt 4
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 304 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 250
>gb|CW441621.1|CW441621 fsbb001f160n21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f160n21, DNA
sequence
Length = 666
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 445 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 386
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 326
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 325 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 266
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 206
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 164
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 147 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 93
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 378 aagttggacggcgctgctagtattccctgttt 409
||||||| |||||||||||||||||| |||||
Sbjct: 45 aagttggtcggcgctgctagtattccgtgttt 14
>gb|AW565625.1|AW565625 LG1_347_B05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 29 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 88
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 148
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 149 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 208
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 268
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 310
Score = 121 bits (61), Expect = 8e-026
Identities = 179/214 (83%), Gaps = 12/214 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 429 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 488
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 489 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 545
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 546 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 602
Query: 553 aaagttactacacgatcga-tatgttctttttgc 585
|||||||||| |||||||| |||||| |||||||
Sbjct: 603 aaagttactatacgatcgantatgttttttttgc 636
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 327 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 381
>gb|AW679715.1|AW679715 WS1_30_A07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 668
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 85 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 144
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 204
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 205 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 264
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 324
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 366
Score = 109 bits (55), Expect = 3e-022
Identities = 143/172 (83%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 485 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 544
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 545 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 601
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttccta 544
|||||||||||||||| |||||||| ||||| || || |||||| ||||||
Sbjct: 602 ggttgtaccctggacctgctatagccggttgatttttncaattgtattccta 653
Score = 77.8 bits (39), Expect = 1e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || |||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 383 ggattgaattcggggaaggaagaggacctggttgaccattctttattacagtttg 437
>gb|BE356388.1|BE356388 DG1_124_E09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 43 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 102
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 162
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 163 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 222
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 282
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 324
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 341 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 395
Score = 58.0 bits (29), Expect = 1e-006
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 472 gttgaggaaatatccttgtacggttgtaccctggacc 508
||||||||||| |||||||||||||||||||||||||
Sbjct: 539 gttgaggaaat-tccttgtacggttgtaccctggacc 574
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgttt 409
||||||| |||||||||||||||||| |||||
Sbjct: 443 aagttggtcggcgctgctagtattccgtgttt 474
>gb|BE358022.1|BE358022 DG1_23_B01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 42 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 101
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 161
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 162 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 221
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 281
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 323
Score = 97.6 bits (49), Expect = 1e-018
Identities = 126/151 (83%), Gaps = 8/151 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 442 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 501
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| | |||||||
Sbjct: 502 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaattttcttgtac 558
Query: 493 ggttgtaccctggacccgctatagctggttg 523
|||||||||||||||| |||||||| |||||
Sbjct: 559 ggttgtaccctggacctgctatagccggttg 589
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 340 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 394
>gb|BE358654.1|BE358654 DG1_30_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 169 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 228
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 288
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 289 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 348
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 408
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 450
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccat 339
|||||| || |||||||||||||||||||||||||||||
Sbjct: 467 ggattgaattcggggaaggaagaggaactggttgaccat 505
>gb|BE366419.1|BE366419 PI1_33_C11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 720
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 156 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 215
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 275
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 276 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 335
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 395
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 437
Score = 105 bits (53), Expect = 5e-021
Identities = 127/151 (84%), Gaps = 8/151 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 556 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 615
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 616 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 672
Query: 493 ggttgtaccctggacccgctatagctggttg 523
|||||||||||||||| |||||||| |||||
Sbjct: 673 ggttgtaccctggacctgctatagccggttg 703
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 454 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 508
>gb|BE593863.1|BE593863 WS1_103_C05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 604
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 206 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 265
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 325
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 326 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 385
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 445
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 487
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 504 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 558
>gb|BE594909.1|BE594909 PI1_47_D08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 621
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 71 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 130
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 190
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 191 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 250
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 310
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 352
Score = 89.7 bits (45), Expect = 3e-016
Identities = 126/151 (83%), Gaps = 9/151 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 472 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 531
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| || |||||| | |||||||||| |||||||||
Sbjct: 532 ctgtagatgtaaaat---tcctcaggccct-gtgctctgcttgaggaaatttccttgtac 587
Query: 493 ggttgtaccctggacccgctatagctggttg 523
|||||||||||||||| |||||||| |||||
Sbjct: 588 ggttgtaccctggacctgctatagccggttg 618
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 369 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 423
>gb|BF480986.1|BF480986 FM1_15_H10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 650
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 125 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 184
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 244
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 245 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 304
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 364
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 406
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 423 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 477
Score = 63.9 bits (32), Expect = 2e-008
Identities = 64/73 (87%), Gaps = 5/73 (6%)
Strand = Plus / Plus
Query: 375 taaaagttggacggcgctgctagtattccctgtttcgt--gt---tttcatattggagga 429
|||||||||| |||||||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 524 taaaagttggtcggcgctgctagtattccatgtttggttggtgtatttcatgttggagga 583
Query: 430 cgtctgtagatgt 442
|||||||||||||
Sbjct: 584 cgtctgtagatgt 596
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 461 cttgtgctcgggttgaggaaatatccttgtacggttgt 498
||||||||| | |||||||||| |||||||||||||||
Sbjct: 613 cttgtgctctgcttgaggaaatttccttgtacggttgt 650
>gb|BF586505.1|BF586505 FM1_29_A11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 600
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 34 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 93
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 153
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 154 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 213
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 273
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 315
Score = 107 bits (54), Expect = 1e-021
Identities = 125/148 (84%), Gaps = 8/148 (5%)
Strand = Plus / Plus
Query: 375 taaaagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggagga 429
|||||||||| |||||||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 433 taaaagttggtcggcgctgctagtattccatgtttggttggtgtatttcatgttggagga 492
Query: 430 cgtctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttg 489
||||||||||||| ||||| ||| ||||||||| | |||||||||| ||||||
Sbjct: 493 cgtctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttg 549
Query: 490 tacggttgtaccctggacccgctatagc 517
||||||||||||||||||| ||||||||
Sbjct: 550 tacggttgtaccctggacctgctatagc 577
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 332 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 386
>gb|BG102056.1|BG102056 RHIZ2_24_C09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 625
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 41 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 100
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 160
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 161 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 220
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 280
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 322
Score = 121 bits (61), Expect = 8e-026
Identities = 138/163 (84%), Gaps = 8/163 (4%)
Strand = Plus / Plus
Query: 375 taaaagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggagga 429
|||||||||| |||||||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 440 taaaagttggtcggcgctgctagtattccatgtttggttggtgtatttcatgttggagga 499
Query: 430 cgtctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttg 489
||||||||||||| ||||| ||| ||||||||| | |||||||||| ||||||
Sbjct: 500 cgtctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttg 556
Query: 490 tacggttgtaccctggacccgctatagctggttggttcttcaa 532
||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 557 tacggttgtaccctggacctgctatagccggttgattcttcaa 599
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 339 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 393
>gb|BG102550.1|BG102550 RHIZ2_34_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 440
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 31 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 90
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 150
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 151 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 210
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 270
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 312
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 329 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 383
>gb|BG356319.1|BG356319 EM1_21_A11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 666
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 70 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 129
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 189
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 190 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 249
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 309
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 351
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 470 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 529
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 530 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 586
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 587 ggttgtaccctggacctgctatagccggttgattcttcaa 626
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 368 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 422
>gb|BG488041.1|BG488041 RHIZ2_62_E05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 612
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 27 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 86
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 146
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 147 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 206
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 266
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 308
Score = 113 bits (57), Expect = 2e-023
Identities = 137/163 (84%), Gaps = 8/163 (4%)
Strand = Plus / Plus
Query: 375 taaaagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggagga 429
|||||||||| |||||||||||||||||| ||||| || || |||||| ||||||||
Sbjct: 426 taaaagttggtcggcgctgctagtattccatgtttggttggtgtatttcatgttggagga 485
Query: 430 cgtctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttg 489
||||||||||||| ||||| ||| ||||||||| | |||||||||| ||||||
Sbjct: 486 cgtctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttg 542
Query: 490 tacggttgtaccctggacccgctatagctggttggttcttcaa 532
||||||||||||||||||| |||||||| ||||| || |||||
Sbjct: 543 tacggttgtaccctggacctgctatagccggttgatttttcaa 585
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 379
>gb|BG557601.1|BG557601 EM1_53_G10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 28 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 87
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 147
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 148 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 207
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 267
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 309
Score = 111 bits (56), Expect = 8e-023
Identities = 133/158 (84%), Gaps = 8/158 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 428 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 487
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 488 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 544
Query: 493 ggttgtaccctggacccgctatagctggttggttcttc 530
|||||||||||||||| |||||||| ||||| ||||||
Sbjct: 545 ggttgtaccctggacctgctatagccggttgattcttc 582
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 326 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 380
>gb|BI074277.1|BI074277 IP1_13_F03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 685
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 45 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 104
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 164
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 165 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 224
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 284
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 326
Score = 184 bits (93), Expect = 6e-045
Identities = 207/242 (85%), Gaps = 11/242 (4%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 445 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 504
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 505 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 561
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||||| |||| |||||| | ||
Sbjct: 562 ggttgtaccctggacctgctatagccggttgattcttcaa-ttgtattcctaaa--agtt 618
Query: 553 aaagttactacacgatcgatatgttctttttgcagaataacaatacttgtctcacgtttc 612
|||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 619 aaagttactatacgatcgatattttttttttgcagaataacaatacttgtctcacgtttc 678
Query: 613 at 614
||
Sbjct: 679 at 680
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 343 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 397
>gb|BM327844.1|BM327844 PIC1_18_B12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 584
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 2 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 61
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 121
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 122 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 181
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 241
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 402 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 461
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 462 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 518
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 519 ggttgtaccctggacctgctatagccggttgattcttcaa 558
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 300 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 354
>gb|CD219947.1|CD219947 CCC1_60_H06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_H06_A007 3', mRNA sequence
Length = 645
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 42 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 101
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 161
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 162 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 221
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 281
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 323
Score = 115 bits (58), Expect = 5e-024
Identities = 166/199 (83%), Gaps = 11/199 (5%)
Strand = Plus / Plus
Query: 381 ttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgtctg 435
|||| |||||||||||||||||| ||||| || || |||||| ||||||||||||||
Sbjct: 445 ttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgtctg 504
Query: 436 tagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtacggt 495
||||||| ||||| ||| ||||||||| | |||||||||| ||||||||||||
Sbjct: 505 tagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtacggt 561
Query: 496 tgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagccaaa 555
||||||||||||| |||||||| ||||| |||||| |||||| |||| || ||| |||
Sbjct: 562 tgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagttaaa 618
Query: 556 gttactacacgatcgatat 574
||||||| |||||||||||
Sbjct: 619 gttactatacgatcgatat 637
Score = 77.8 bits (39), Expect = 1e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 340 ggattgaattcggagaaggaagaggaactggttgaccattctttattacagtttg 394
>gb|CD222142.1|CD222142 CCC1_2_D07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_D07_A007 3', mRNA sequence
Length = 623
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 45 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 104
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 164
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 165 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 224
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 284
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 326
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 445 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 504
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 505 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 561
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 562 ggttgtaccctggacctgctatagccggttgattcttcaa 601
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 343 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 397
>gb|CD222334.1|CD222334 CCC1_21_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_F04_A007 3', mRNA sequence
Length = 662
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 56 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 115
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 175
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 176 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 235
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 295
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 337
Score = 135 bits (68), Expect = 5e-030
Identities = 179/213 (84%), Gaps = 11/213 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 456 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 515
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 516 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 572
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 573 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 629
Query: 553 aaagttactacacgatcgatatgttctttttgc 585
|||||||||| |||||||||||||| |||||||
Sbjct: 630 aaagttactatacgatcgatatgttttttttgc 662
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 354 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 408
>gb|CD222615.1|CD222615 CCC1_23_A08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_23_A08_A007 3', mRNA sequence
Length = 628
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 55 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 114
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 174
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 175 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 234
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 294
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 336
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 455 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 514
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 515 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 571
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 572 ggttgtaccctggacctgctatagccggttgattcttcaa 611
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 353 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 407
>gb|CD224153.1|CD224153 CCC1_32_E07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_32_E07_A007 3', mRNA sequence
Length = 658
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 57 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 116
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 176
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 177 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 236
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 296
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 338
Score = 119 bits (60), Expect = 3e-025
Identities = 168/201 (83%), Gaps = 11/201 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 457 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 516
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 517 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 573
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 574 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 630
Query: 553 aaagttactacacgatcgata 573
|||||||||| ||||||||||
Sbjct: 631 aaagttactatacgatcgata 651
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 355 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 409
>gb|CD228676.1|CD228676 CCC1_9_A02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_A02_A007 3', mRNA sequence
Length = 646
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 74 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 133
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 193
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 194 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 253
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 313
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 355
Score = 97.6 bits (49), Expect = 1e-018
Identities = 123/147 (83%), Gaps = 8/147 (5%)
Strand = Plus / Plus
Query: 381 ttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgtctg 435
|||| |||||||||||||||||| ||||| || || |||||| ||||||||||||||
Sbjct: 477 ttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgtctg 536
Query: 436 tagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtacggt 495
||||||| ||||| ||| ||||||||| | |||||||||| ||||||||||||
Sbjct: 537 tagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtacggt 593
Query: 496 tgtaccctggacccgctatagctggtt 522
||||||||||||| |||||||| ||||
Sbjct: 594 tgtaccctggacctgctatagccggtt 620
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 372 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 426
>gb|CD236168.1|CD236168 SS1_32_E11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_32_E11_A012 3', mRNA sequence
Length = 637
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 56 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 115
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 175
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 176 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 235
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 295
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 337
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 456 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 515
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 516 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 572
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 573 ggttgtaccctggacctgctatagccggttgattcttcaa 612
Score = 77.8 bits (39), Expect = 1e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 354 ggattgaattcggggaaggaagaggaactagttgaccattctttattacagtttg 408
>gb|CD462131.1|CD462131 SA1_39_D04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_39_D04_A002 3', mRNA sequence
Length = 640
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 39 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 98
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 158
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 159 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 218
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 278
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 320
Score = 121 bits (61), Expect = 8e-026
Identities = 169/202 (83%), Gaps = 11/202 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 438 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 497
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 498 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 554
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 555 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 611
Query: 553 aaagttactacacgatcgatat 574
|||||||||| |||||||||||
Sbjct: 612 aaagttactatacgatcgatat 633
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 337 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 391
>gb|CF427565.1|CF427565 PH1_16_E09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_16_E09_A002 3', mRNA sequence
Length = 554
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 35 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 94
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 154
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 155 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 214
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 274
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 316
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 333 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 387
Score = 65.9 bits (33), Expect = 4e-009
Identities = 101/123 (82%), Gaps = 8/123 (6%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 435 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 494
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 495 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 551
Query: 493 ggt 495
|||
Sbjct: 552 ggt 554
>gb|CF428663.1|CF428663 PH1_17_H06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_H06_A002 3', mRNA sequence
Length = 693
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 352 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 411
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 471
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 472 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 531
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 591
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 633
Score = 69.9 bits (35), Expect = 3e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattctt 343
|||||| || |||||||||||||||||||||||||||||||||
Sbjct: 650 ggattgaattcggggaaggaagaggaactggttgaccattctt 692
>gb|CF428859.1|CF428859 PH1_18_H06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_H06_A002 3', mRNA sequence
Length = 623
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 283 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 342
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 402
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 403 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 462
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 522
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 564
Score = 69.9 bits (35), Expect = 3e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattctt 343
|||||| || |||||||||||||||||||||||||||||||||
Sbjct: 581 ggattgaattcggggaaggaagaggaactggttgaccattctt 623
>gb|CF434138.1|CF434138 NIT1_32_B06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_32_B06_A002 3', mRNA sequence
Length = 672
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 60 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 119
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 179
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 180 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 239
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 299
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 341
Score = 101 bits (51), Expect = 7e-020
Identities = 122/145 (84%), Gaps = 8/145 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 460 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 519
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 520 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 576
Query: 493 ggttgtaccctggacccgctatagc 517
|||||||||||||||| ||||||||
Sbjct: 577 ggttgtaccctggacctgctatagc 601
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 358 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 412
>gb|CF489719.1|CF489719 POL1_59_F05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F05_A002 3', mRNA sequence
Length = 652
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 66 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 125
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 185
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 186 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 245
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 305
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 347
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 466 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 525
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 526 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 582
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 583 ggttgtaccctggacctgctatagccggttgattcttcaa 622
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 364 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 418
>gb|CF760068.1|CF760068 DSAF1_55_B03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_55_B03_A011 5', mRNA sequence
Length = 636
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 46 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 105
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 165
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 166 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 225
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 285
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 327
Score = 107 bits (54), Expect = 1e-021
Identities = 134/160 (83%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 446 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 505
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 506 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 562
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|| ||||||||||||| |||||||| ||||| ||||||||
Sbjct: 563 gggtgtaccctggacctgctatagccggttgattcttcaa 602
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 344 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 398
>gb|CN133292.1|CN133292 OX1_11_G06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_G06_A002 3', mRNA sequence
Length = 691
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 93 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 152
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 212
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 213 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 272
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 332
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 374
Score = 127 bits (64), Expect = 1e-027
Identities = 172/205 (83%), Gaps = 11/205 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 493 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 552
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 553 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 609
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 610 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 666
Query: 553 aaagttactacacgatcgatatgtt 577
|||||||||| ||||||||||||||
Sbjct: 667 aaagttactatacgatcgatatgtt 691
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 391 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 445
>gb|CN145285.1|CN145285 WOUND1_28_A04.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A04_A002 3', mRNA sequence
Length = 739
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 165 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 224
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 284
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 285 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 344
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 404
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 446
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 565 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 624
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 625 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 681
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 682 ggttgtaccctggacctgctatagccggttgattcttcaa 721
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 463 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 517
>gb|CN148100.1|CN148100 WOUND1_54_E06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_54_E06_A002 3', mRNA sequence
Length = 743
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 166 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 225
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 285
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 286 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 345
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 405
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 447
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 566 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 625
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 626 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 682
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 683 ggttgtaccctggacctgctatagccggttgattcttcaa 722
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 464 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 518
>gb|CX606476.1|CX606476 ANR1_3_F07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_F07_A002 3', mRNA sequence
Length = 753
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 146 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 205
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 265
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 266 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 325
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 385
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 427
Score = 131 bits (66), Expect = 8e-029
Identities = 177/211 (83%), Gaps = 11/211 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 546 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 605
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 606 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 662
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 663 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 719
Query: 553 aaagttactacacgatcgatatgttcttttt 583
|||||||||| |||||||||||||| |||||
Sbjct: 720 aaagttactatacgatcgatatgtttttttt 750
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 498
>gb|CX606805.1|CX606805 ANR1_5_C04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_C04_A002 3', mRNA sequence
Length = 775
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 166 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 225
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 285
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 286 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 345
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 405
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 447
Score = 131 bits (66), Expect = 8e-029
Identities = 177/211 (83%), Gaps = 11/211 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 566 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 625
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 626 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 682
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 683 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 739
Query: 553 aaagttactacacgatcgatatgttcttttt 583
|||||||||| |||||||||||||| |||||
Sbjct: 740 aaagttactatacgatcgatatgtttttttt 770
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 464 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 518
>gb|CX607355.1|CX607355 ANR1_8_D05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_8_D05_A002 3', mRNA sequence
Length = 772
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 165 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 224
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 284
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 285 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 344
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 404
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 446
Score = 131 bits (66), Expect = 8e-029
Identities = 177/211 (83%), Gaps = 11/211 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 565 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 624
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 625 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 681
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 682 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 738
Query: 553 aaagttactacacgatcgatatgttcttttt 583
|||||||||| |||||||||||||| |||||
Sbjct: 739 aaagttactatacgatcgatatgtttttttt 769
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 463 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 517
>gb|CX608537.1|CX608537 ANR1_39_E03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_E03_A002 3', mRNA sequence
Length = 622
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 52 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 111
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 112 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 171
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 172 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 231
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 291
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 333
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 452 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 511
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 512 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 568
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 569 ggttgtaccctggacctgctatagccggttgattcttcaa 608
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 404
>gb|CX610976.1|CX610976 ANR1_22_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_A04_A002 3', mRNA sequence
Length = 775
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 156 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 215
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 275
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 276 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 335
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 395
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 437
Score = 153 bits (77), Expect = 2e-035
Identities = 191/226 (84%), Gaps = 11/226 (4%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 556 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 615
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 616 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 672
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||| | |||||| |||||| |||| || |||
Sbjct: 673 ggttgtaccctggacctgctatagccggtcgattcttc-aattgtattcc--taaaagtt 729
Query: 553 aaagttactacacgatcgatatgttctttttgcagaataacaatac 598
|||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 730 aaagttactatacgatcgatatgttttttttgcagaataacaatac 775
Score = 77.8 bits (39), Expect = 1e-012
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || |||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 454 ggattgaattcggggaaggaagaggagctggttgaccattctttattacagtttg 508
>gb|CX610995.1|CX610995 ANR1_22_B12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B12_A002 3', mRNA sequence
Length = 762
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 159 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 218
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 278
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 279 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 338
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 398
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 440
Score = 129 bits (65), Expect = 3e-028
Identities = 176/210 (83%), Gaps = 11/210 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 559 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 618
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 619 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 675
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 676 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 732
Query: 553 aaagttactacacgatcgatatgttctttt 582
|||||||||| |||||||||||||| ||||
Sbjct: 733 aaagttactatacgatcgatatgttttttt 762
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 457 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 511
>gb|CX613816.1|CX613816 GABR1_10_H05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_H05_A002 3', mRNA sequence
Length = 679
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 101 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 160
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 220
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 221 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 280
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 340
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 382
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 501 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 560
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 561 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 617
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 618 ggttgtaccctggacctgctatagccggttgattcttcaa 657
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 399 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 453
>gb|CX614086.1|CX614086 GABR1_12_A09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_12_A09_A002 3', mRNA sequence
Length = 648
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 42 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 101
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 161
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 162 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 221
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 281
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 323
Score = 135 bits (68), Expect = 5e-030
Identities = 179/213 (84%), Gaps = 11/213 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 442 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 501
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 502 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 558
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 559 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 615
Query: 553 aaagttactacacgatcgatatgttctttttgc 585
|||||||||| |||||||||||||| |||||||
Sbjct: 616 aaagttactatacgatcgatatgttttttttgc 648
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 340 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 394
>gb|CX619871.1|CX619871 GABR1_48_G11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_48_G11_A002 3', mRNA sequence
Length = 771
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 164 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 223
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 283
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 284 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 343
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 403
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 445
Score = 131 bits (66), Expect = 8e-029
Identities = 177/211 (83%), Gaps = 11/211 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 564 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 623
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 624 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 680
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaaattgtgttcctatagaagcc 552
|||||||||||||||| |||||||| ||||| |||||| |||||| |||| || |||
Sbjct: 681 ggttgtaccctggacctgctatagccggttgattcttc-aattgtattcc--taaaagtt 737
Query: 553 aaagttactacacgatcgatatgttcttttt 583
|||||||||| |||||||||||||| |||||
Sbjct: 738 aaagttactatacgatcgatatgtttttttt 768
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 462 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 516
>gb|CX620937.1|CX620937 GABR1_55_A11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_55_A11_A002 3', mRNA sequence
Length = 738
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 156 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 215
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 275
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 276 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 335
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 395
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 437
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 556 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 615
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 616 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 672
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 673 ggttgtaccctggacctgctatagccggttgattcttcaa 712
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 454 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 508
>gb|CX622168.1|CX622168 GABR1_62_H11.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_62_H11_A002 3', mRNA sequence
Length = 741
Score = 432 bits (218), Expect = e-119
Identities = 267/282 (94%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 ctgcagccg-cgagccccacggccattaaacaggtgaactgcgtgtgggacgcgtacgag 61
||||||||| |||||||||||||| | || ||||||| ||||||||||||||||||||||
Sbjct: 165 ctgcagccgacgagccccacggccgtgaagcaggtgagctgcgtgtgggacgcgtacgag 224
Query: 62 gccaccaagggcgcccacggggtgtgcatcctgaccgagtgggacgagttcaagaccctg 121
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gccaccaagggtgcccacggtctgtgcatcctgaccgagtgggacgagttcaagaccctg 284
Query: 122 gactaccagaagatcttcgacaacatgcagaagcccgccttcgtcttcgacggccgcaac 181
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 285 gactaccagaagatcttcgacaacatgcagaagcctgccttcgtcttcgacggtcgcaac 344
Query: 182 atcatcgacccggagaagttgagggagatcggcttcatcgtctactccatcggcaagccg 241
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 attgtcgaccccgagaagctgagggagatcggcttcatcgtctactccatcggcaagccc 404
Query: 242 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 283
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctcgacgcctggcttaaggacatgcccgcggtcgcttaattc 446
Score = 115 bits (58), Expect = 5e-024
Identities = 135/160 (84%), Gaps = 8/160 (5%)
Strand = Plus / Plus
Query: 378 aagttggacggcgctgctagtattccctgtttcgt----gt-tttcatattggaggacgt 432
||||||| |||||||||||||||||| ||||| || || |||||| |||||||||||
Sbjct: 565 aagttggtcggcgctgctagtattccgtgtttggttggtgtatttcatgttggaggacgt 624
Query: 433 ctgtagatgtnnnnnnnntcctcgggcgcttgtgctcgggttgaggaaatatccttgtac 492
|||||||||| ||||| ||| ||||||||| | |||||||||| |||||||||
Sbjct: 625 ctgtagatgtaaaat---tcctcaggcccttgtgctctgcttgaggaaatttccttgtac 681
Query: 493 ggttgtaccctggacccgctatagctggttggttcttcaa 532
|||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 682 ggttgtaccctggacctgctatagccggttgattcttcaa 721
Score = 85.7 bits (43), Expect = 4e-015
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 301 ggattggatccggggaaggaagaggaactggttgaccattcttcattacagtttg 355
|||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 463 ggattgaattcggggaaggaagaggaactggttgaccattctttattacagtttg 517
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 136,676
Number of Sequences: 832831
Number of extensions: 136676
Number of successful extensions: 39630
Number of sequences better than 0.5: 203
Number of HSP's better than 0.5 without gapping: 202
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 38826
Number of HSP's gapped (non-prelim): 738
length of query: 616
length of database: 491,359,669
effective HSP length: 19
effective length of query: 597
effective length of database: 475,535,880
effective search space: 283894920360
effective search space used: 283894920360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)