BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306434.2.3
(3914 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 1007 0.0
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 839 0.0
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 835 0.0
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 829 0.0
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 825 0.0
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 771 0.0
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 737 0.0
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 722 0.0
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 688 0.0
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 688 0.0
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 678 0.0
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 638 0.0
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 618 e-175
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 611 e-172
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 611 e-172
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 579 e-163
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 476 e-132
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 470 e-130
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 456 e-126
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 416 e-114
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 414 e-113
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 392 e-107
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 387 e-105
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 383 e-104
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 341 3e-091
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 289 1e-075
gb|CW068735.1|CW068735 104_317_10525278_1_30096 Sorghum met... 287 4e-075
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 278 4e-072
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 274 6e-071
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 274 6e-071
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 274 6e-071
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 274 6e-071
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 268 4e-069
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 266 1e-068
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 264 6e-068
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 246 1e-062
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 242 2e-061
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 240 8e-061
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 240 8e-061
gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle... 236 1e-059
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 232 2e-058
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 222 2e-055
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 222 2e-055
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 220 8e-055
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 212 2e-052
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 212 2e-052
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 208 3e-051
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 204 4e-050
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 190 7e-046
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 190 7e-046
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 190 7e-046
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 190 7e-046
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 188 3e-045
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 186 1e-044
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 182 2e-043
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 180 7e-043
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 180 7e-043
gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient se... 180 7e-043
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 178 3e-042
gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-tre... 178 3e-042
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 172 2e-040
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 168 2e-039
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 168 2e-039
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 163 2e-037
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 163 2e-037
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 163 2e-037
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 161 6e-037
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 159 2e-036
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 155 4e-035
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 153 1e-034
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 151 6e-034
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 149 2e-033
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 149 2e-033
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 143 1e-031
gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation... 139 2e-030
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 135 3e-029
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 135 3e-029
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 133 1e-028
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 131 5e-028
gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Me... 131 5e-028
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 131 5e-028
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 131 5e-028
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 131 5e-028
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 129 2e-027
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 129 2e-027
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 129 2e-027
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 125 3e-026
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 123 1e-025
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 123 1e-025
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 123 1e-025
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 119 2e-024
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 117 8e-024
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 117 8e-024
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 117 8e-024
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 113 1e-022
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 111 5e-022
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 109 2e-021
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 105 3e-020
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 105 3e-020
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 103 1e-019
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 101 5e-019
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 101 5e-019
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 101 5e-019
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 100 2e-018
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 100 2e-018
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 98 8e-018
gb|BG465904.1|BG465904 RHIZ2_46_A10.g1_A003 Rhizome2 (RHIZ2... 98 8e-018
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 98 8e-018
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 98 8e-018
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 98 8e-018
gb|CL155293.1|CL155293 104_341_10782024_116_31472_120 Sorgh... 96 3e-017
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 96 3e-017
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 96 3e-017
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 94 1e-016
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 94 1e-016
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 94 1e-016
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 92 5e-016
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 92 5e-016
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 92 5e-016
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 92 5e-016
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 90 2e-015
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 90 2e-015
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 90 2e-015
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 88 7e-015
gb|CW406407.1|CW406407 fsbb001f099g12f0 Sorghum methylation... 88 7e-015
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 86 3e-014
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 86 3e-014
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 86 3e-014
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 84 1e-013
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 84 1e-013
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 84 1e-013
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 82 4e-013
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 82 4e-013
gb|CW462663.1|CW462663 fsbb001f210o15k0 Sorghum methylation... 82 4e-013
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 82 4e-013
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 82 4e-013
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 82 4e-013
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 82 4e-013
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 82 4e-013
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 82 4e-013
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 82 4e-013
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 80 2e-012
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 78 7e-012
gb|BE362694.1|BE362694 DG1_88_F12.g1_A002 Dark Grown 1 (DG1... 78 7e-012
gb|BG103120.1|BG103120 RHIZ2_18_D07.g1_A003 Rhizome2 (RHIZ2... 78 7e-012
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 78 7e-012
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 78 7e-012
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 76 3e-011
gb|CW431890.1|CW431890 fsbb001f146f11k0 Sorghum methylation... 76 3e-011
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 76 3e-011
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 76 3e-011
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 76 3e-011
gb|CW071795.1|CW071795 104_324_10591777_116_30462 Sorghum m... 74 1e-010
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 74 1e-010
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 74 1e-010
gb|BE357266.1|BE357266 DG1_148_D12.b1_A002 Dark Grown 1 (DG... 74 1e-010
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 74 1e-010
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 74 1e-010
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 74 1e-010
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 74 1e-010
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 72 4e-010
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 72 4e-010
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 72 4e-010
gb|BZ422160.1|BZ422160 id50c12.b1 WGS-SbicolorF (DH5a methy... 70 2e-009
gb|CW039030.1|CW039030 104_271_10505258_114_30387 Sorghum m... 70 2e-009
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 70 2e-009
gb|CW203375.1|CW203375 104_631_11185990_116_37062_095 Sorgh... 70 2e-009
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 70 2e-009
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 70 2e-009
gb|BG158395.1|BG158395 FM1_60_A04.b1_A003 Floral-Induced Me... 70 2e-009
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 70 2e-009
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 68 7e-009
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 68 7e-009
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 68 7e-009
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 68 7e-009
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 68 7e-009
gb|BE125071.1|BE125071 DG1_15_D04.b1_A002 Dark Grown 1 (DG1... 68 7e-009
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 68 7e-009
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 68 7e-009
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 68 7e-009
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 68 7e-009
gb|BE126093.1|BE126093 DG1_65_G07.g1_A002 Dark Grown 1 (DG1... 66 3e-008
gb|BE126121.1|BE126121 DG1_65_B11.g1_A002 Dark Grown 1 (DG1... 66 3e-008
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 66 3e-008
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 66 3e-008
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 66 3e-008
gb|CN132797.1|CN132797 OX1_8_F12.b1_A002 Oxidatively-stress... 66 3e-008
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 64 1e-007
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 64 1e-007
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 64 1e-007
gb|CW462662.1|CW462662 fsbb001f210o15f0 Sorghum methylation... 64 1e-007
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 64 1e-007
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 64 1e-007
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 64 1e-007
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 64 1e-007
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 64 1e-007
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 64 1e-007
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 64 1e-007
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 64 1e-007
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 62 4e-007
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 62 4e-007
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 62 4e-007
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 62 4e-007
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 60 2e-006
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 58 6e-006
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 58 6e-006
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 58 6e-006
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 58 6e-006
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 58 6e-006
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 58 6e-006
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 58 6e-006
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 58 6e-006
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 58 6e-006
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 58 6e-006
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 58 6e-006
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 58 6e-006
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 58 6e-006
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 56 3e-005
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 56 3e-005
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 56 3e-005
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 56 3e-005
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 56 3e-005
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 56 3e-005
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 56 3e-005
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 56 3e-005
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 54 1e-004
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 54 1e-004
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 54 1e-004
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 54 1e-004
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 52 4e-004
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 52 4e-004
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 52 4e-004
gb|CL157591.1|CL157591 104_345_10783695_114_31477_255 Sorgh... 50 0.002
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 50 0.002
gb|CL161384.1|CL161384 104_352_10805682_116_31827_354 Sorgh... 50 0.002
gb|CL177245.1|CL177245 104_384_10893704_116_31916_152 Sorgh... 50 0.002
gb|CL197184.1|CL197184 104_424_10943572_114_32383_016 Sorgh... 50 0.002
gb|CW082277.1|CW082277 104_424_10943572_114_32334_016 Sorgh... 50 0.002
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 50 0.002
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 50 0.002
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 50 0.002
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 50 0.002
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 50 0.002
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 50 0.002
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 50 0.002
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 50 0.002
gb|CW068734.1|CW068734 104_317_10525278_115_30116 Sorghum m... 48 0.006
gb|CW195166.1|CW195166 104_618_11180494_116_36796_085 Sorgh... 48 0.006
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 48 0.006
gb|CW478262.1|CW478262 fsbb001f236b03f0 Sorghum methylation... 46 0.025
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 46 0.025
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 46 0.025
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 46 0.025
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 46 0.025
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 46 0.025
gb|CL161383.1|CL161383 104_352_10805682_114_31826_354 Sorgh... 44 0.098
gb|CW101100.1|CW101100 104_468_11004458_148_34395_003 Sorgh... 44 0.098
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 44 0.098
gb|CW150094.1|CW150094 104_549_11142847_116_36303_026 Sorgh... 44 0.098
gb|CW187969.1|CW187969 104_607_11172768_116_36728_088 Sorgh... 44 0.098
gb|CW237056.1|CW237056 104_693_11215955_116_37514_044 Sorgh... 44 0.098
gb|CW319176.1|CW319176 104_811_11474346_116_35881_069 Sorgh... 44 0.098
gb|CW328753.1|CW328753 104_825_11479478_116_36002_063 Sorgh... 44 0.098
gb|CW328754.1|CW328754 104_825_11479478_148_36001_063 Sorgh... 44 0.098
gb|CW420003.1|CW420003 fsbb001f126b21k0 Sorghum methylation... 44 0.098
gb|CW434433.1|CW434433 fsbb001f150c03f0 Sorghum methylation... 44 0.098
gb|BF705097.1|BF705097 RHIZ2_1_D04.b1_A003 Rhizome2 (RHIZ2)... 44 0.098
gb|BZ347769.1|BZ347769 ho34d05.g2 WGS-SbicolorF (JM107 adap... 42 0.39
gb|CL150967.1|CL150967 104_333_10778910_116_31360_078 Sorgh... 42 0.39
gb|CL160702.1|CL160702 104_351_10805174_116_31825_230 Sorgh... 42 0.39
gb|CL187106.1|CL187106 104_402_10900655_114_32432_090 Sorgh... 42 0.39
gb|CL191568.1|CL191568 104_410_10906891_116_32538_070 Sorgh... 42 0.39
gb|CW056422.1|CW056422 104_298_10517674_115_30157 Sorghum m... 42 0.39
gb|CW067439.1|CW067439 104_315_10524278_114_30124 Sorghum m... 42 0.39
gb|CW089828.1|CW089828 104_435_10948934_114_32597_057 Sorgh... 42 0.39
gb|CW090912.1|CW090912 104_448_10958206_114_32150_074 Sorgh... 42 0.39
gb|CW107501.1|CW107501 104_477_11096624_148_34473_020 Sorgh... 42 0.39
gb|CW148253.1|CW148253 104_542_11140317_148_35006_083 Sorgh... 42 0.39
gb|CW198838.1|CW198838 104_623_11183188_148_36842_004 Sorgh... 42 0.39
gb|CW232088.1|CW232088 104_681_11211474_116_37346_069 Sorgh... 42 0.39
gb|CW232089.1|CW232089 104_681_11211474_148_37350_069 Sorgh... 42 0.39
gb|CW319135.1|CW319135 104_811_11474323_148_35882_070 Sorgh... 42 0.39
gb|CW339393.1|CW339393 104_840_11485251_116_36138_014 Sorgh... 42 0.39
gb|CW365420.1|CW365420 fsbb001f037p07f0 Sorghum methylation... 42 0.39
gb|CW408810.1|CW408810 fsbb001f102n19k0 Sorghum methylation... 42 0.39
gb|CW411521.1|CW411521 fsbb001f106l17k0 Sorghum methylation... 42 0.39
gb|CW440737.1|CW440737 fsbb001f159i10f0 Sorghum methylation... 42 0.39
gb|CW443262.1|CW443262 fsbb001f163e15f0 Sorghum methylation... 42 0.39
gb|CW465013.1|CW465013 fsbb001f215j03f0 Sorghum methylation... 42 0.39
gb|CW496562.1|CW496562 fsbb001f288o02k0 Sorghum methylation... 42 0.39
gb|BE366968.1|BE366968 PI1_42_A12.b1_A002 Pathogen induced ... 42 0.39
gb|BF481027.1|BF481027 FM1_15_D09.b1_A003 Floral-Induced Me... 42 0.39
gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Me... 42 0.39
gb|BF585744.1|BF585744 FM1_24_A11.b1_A003 Floral-Induced Me... 42 0.39
gb|BF585745.1|BF585745 FM1_24_A12.b1_A003 Floral-Induced Me... 42 0.39
gb|BF585932.1|BF585932 FM1_25_C07.b1_A003 Floral-Induced Me... 42 0.39
gb|BF587109.1|BF587109 FM1_32_C11.b1_A003 Floral-Induced Me... 42 0.39
gb|BF587338.1|BF587338 FM1_35_B10.b1_A003 Floral-Induced Me... 42 0.39
gb|BF588153.1|BF588153 FM1_38_D07.b1_A003 Floral-Induced Me... 42 0.39
gb|BF588156.1|BF588156 FM1_38_D10.b1_A003 Floral-Induced Me... 42 0.39
gb|BF655658.1|BF655658 FM1_47_C04.b1_A003 Floral-Induced Me... 42 0.39
gb|BG050294.1|BG050294 FM1_53_B06.b1_A003 Floral-Induced Me... 42 0.39
gb|BG102983.1|BG102983 RHIZ2_35_F10.b1_A003 Rhizome2 (RHIZ2... 42 0.39
gb|BG357357.1|BG357357 OV2_12_H04.b1_A002 Ovary 2 (OV2) Sor... 42 0.39
gb|BG466105.1|BG466105 RHIZ2_48_F08.g1_A003 Rhizome2 (RHIZ2... 42 0.39
gb|BG488316.1|BG488316 RHIZ2_62_B03.b1_A003 Rhizome2 (RHIZ2... 42 0.39
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 42 0.39
gb|CX618476.1|CX618476 GABR1_39_G10.g1_A002 GA- or brassino... 42 0.39
>gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 580
Score = 1007 bits (508), Expect = 0.0
Identities = 556/572 (97%)
Strand = Plus / Minus
Query: 2198 cgcgtacgttgtttccaggccaggggcttccatcttgcattgtccatccttcctcaggaa 2257
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 580 cgcgtacgttgtttccaggccagaggcttccatcttgcattgtccatccttcctcaggaa 521
Query: 2258 ccttttgggcttttgcaaccaaggcattgatccttaccttgaattcctcgtattctctct 2317
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 520 ccttttgggcttttgcaaccaaggcgttgatccttaccttgaattcctcgtattctctct 461
Query: 2318 tcatcgccctcctctccctaacaaatgaagcagcaaccttgtctttcaggtagtctatct 2377
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 460 tcattgccctcctctccctaacaaatgaagcggcaaccttgtctttcaggtagtctatct 401
Query: 2378 tctgttggaagtaccactcaggagcacgaggctcgatattaaactttttgctgaaaggaa 2437
|||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 400 tctgttggaagtaccactcaggagcacgaggctcaagattaaactttttgcagaaaggaa 341
Query: 2438 cccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcac 2497
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 340 cccatttttttgcaaattcagatgtttcagacaacgcttcaaacgtaagcattgcagcac 281
Query: 2498 catcatcagaaacatagcaggagaccttctcaaccggataatccacagaaaggatggaaa 2557
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 280 catcatcagaaacatagcaggagaccttctcaaccggataatccacggaaaggatggaaa 221
Query: 2558 ggacagtgttcgctgtgaccaagggaggttcctttgtgggatcaaccgtactgacaaaga 2617
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 220 ggacagtgttcgctgtgaccaagggaggttcctttgagggatcaaccgtactgacaaaga 161
Query: 2618 agtcgattggagcaagctgagagggttgaccttccttgtcaaaccttagtgacaaacggt 2677
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agtcaatcggagcaagctgagagggttgaccttccttgtcaaaccttagtgacaaacggt 101
Query: 2678 ccaggtaagtctctctctcgattggaagccactttgggaactgatcaagaatccaggaca 2737
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccaggtaagtctctctctcaattggaagccactttgggaactgatcaagaatccaggaca 41
Query: 2738 tcgcaaaccagatttcacagattacagatatg 2769
| |||||||||||||||||||| |||||||||
Sbjct: 40 tggcaaaccagatttcacagataacagatatg 9
>gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 839 bits (423), Expect = 0.0
Identities = 465/479 (97%)
Strand = Plus / Minus
Query: 2296 ttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaagcagcaacc 2355
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 491 ttgaattcctcgtattctctcttcattgccctcctctccctaacaaatgaagcggcaacc 432
Query: 2356 ttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctcgata 2415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 431 ttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctcaaga 372
Query: 2416 ttaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgct 2475
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 371 ttaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgct 312
Query: 2476 tcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccgga 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccgga 252
Query: 2536 taatccacagaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgtg 2595
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 251 taatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgag 192
Query: 2596 ggatcaaccgtactgacaaagaagtcgattggagcaagctgagagggttgaccttccttg 2655
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 191 ggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgaccttccttg 132
Query: 2656 tcaaaccttagtgacaaacggtccaggtaagtctctctctcgattggaagccactttggg 2715
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131 tcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccactttggg 72
Query: 2716 aactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagcca 2774
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 71 aactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatgagcca 13
>gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 477
Score = 835 bits (421), Expect = 0.0
Identities = 457/469 (97%)
Strand = Plus / Minus
Query: 1741 ttaggagcatcataaccatatagtgcctgccgtctgaaaacacatccagtacccacataa 1800
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttaggagcatcataaccatacagtgcctgccgtctgaaaacacatccagtacccacatag 418
Query: 1801 atgggcccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctg 1860
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 417 atgggtccttgaataccatccaaacctttcatgttgatatcaaaaaagacgacattcctg 358
Query: 1861 ttagcatatcgatcatgacggtcaataccaccaaacctctgagggaactgtacatagcac 1920
|| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 357 tttgcgtatcgatcatgacggtcaataccatcaaacctctgagggaactggacatagcac 298
Query: 1921 actttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgcta 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 actttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgcta 238
Query: 1981 ttgttgatgtagtgatcacagtccaagttcaataggtatgcagcatttgataagacagca 2040
|||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct: 237 ttgttgatgtagtgatcacaatccaagttcaataggtacggagcatttgataagacagca 178
Query: 2041 gagacacggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctc 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gagacacggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctc 118
Query: 2101 ttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccacca 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccacca 58
Query: 2161 ctttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgt 2209
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ctttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgt 9
>gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 829 bits (418), Expect = 0.0
Identities = 559/606 (92%)
Strand = Plus / Minus
Query: 931 atttccaggatgccggtcacggagatgcagatgaaaagtgccatgaaccagatactggcc 990
||||| ||||||||||| || | ||||||||||||||||||||||||||||||||| ||
Sbjct: 614 atttcaaggatgccggtgacagcgatgcagatgaaaagtgccatgaaccagatactagcg 555
Query: 991 acattggtaagctctggtgtgataaacttccccgtgagcaggcagatggcaggcaaggta 1050
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 554 acattggtaagctctggtgtgataaatttccccgtgagcagacagatggcaggcaaggta 495
Query: 1051 cagtaagccaggagaggaatggacgtccagggataaacgatggagttgatataagaaaac 1110
|||||||||| |||||||||||| ||||| || || || || |||||||| |||||||||
Sbjct: 494 cagtaagccaagagaggaatggatgtccatgggtatacaatagagttgatgtaagaaaac 435
Query: 1111 ctttccaggaattttagcccgccgccgtacccgtaccaaagtgggcagtgcttgctgaag 1170
||||||| |||||||| || || || || ||||||||||||||||||||||||||||||
Sbjct: 434 ctttccaaaaattttaggccaccaccatatccgtaccaaagtgggcagtgcttgctgaag 375
Query: 1171 aaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcggaaaggttc 1230
|||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 374 aaaatttcaacagatccaagagcccaacgaaggacctggtgaagccggtcagaaagattc 315
Query: 1231 agaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagcca 1290
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 314 agaggtgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccaacca 255
Query: 1291 tggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaatccagcca 1350
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 254 tggcagtgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagcca 195
Query: 1351 atctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttcc 1410
|||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 194 atctctttcccccagtcagtcttgtcttcgtagccgcagctgattacatgtatagcttcc 135
Query: 1411 ttcagaagagaagctggacttgcgctcttcagggtccctccgttctcaagaagtgttgat 1470
|| |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||
Sbjct: 134 tttagaagagaagctggacttgcactcctcagggtcccaccattctcaagaagtgttgat 75
Query: 1471 gcgacaaaaacagaagactgcccaaatttcttctctagtttctgttgatttacaattccg 1530
|| ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 74 gcaacaaaaacagatgactgcccaaatttcttttctagtttctgttgacttacaattcca 15
Query: 1531 gccttc 1536
||||||
Sbjct: 14 gccttc 9
>gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 468
Score = 825 bits (416), Expect = 0.0
Identities = 446/456 (97%)
Strand = Plus / Minus
Query: 2099 tcttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccac 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccac 405
Query: 2159 cactttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggcc 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cactttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggcc 345
Query: 2219 aggggcttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaacca 2278
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agaggcttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaacca 285
Query: 2279 aggcattgatccttaccttgaattcctcgtattctctcttcatcgccctcctctccctaa 2338
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 284 aggcgttgatccttaccttgaattcctcgtattctctcttcattgccctcctctccctaa 225
Query: 2339 caaatgaagcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcag 2398
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 caaatgaagcggcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcag 165
Query: 2399 gagcacgaggctcgatattaaactttttgctgaaaggaacccatttctttgcaaattcag 2458
||||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 164 gagcacgaggctcaagattaaactttttgcagaaaggaacccatttttttgcaaattcag 105
Query: 2459 atgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcagg 2518
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgtttcagacaacgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcagg 45
Query: 2519 agaccttctcaaccggataatccacagaaaggatgg 2554
||||||||||||||||||||||||| ||||||||||
Sbjct: 44 agaccttctcaaccggataatccacggaaaggatgg 9
>gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 473
Score = 771 bits (389), Expect = 0.0
Identities = 446/465 (95%)
Strand = Plus / Minus
Query: 2672 aacggtccaggtaagtctctctctcgattggaagccactttgggaactgatcaagaatcc 2731
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 473 aacggtccaggtaagtctctctctcaattggaagccactttgggaactgatcaagaatcc 414
Query: 2732 aggacatcgcaaaccagatttcacagattacagatatgagccacaatgcaaatgcatctt 2791
||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct: 413 aggacatggcaaaccagatttcacagataacagatatgagccataatgcgaacgcatctt 354
Query: 2792 tcgccggatgcatcactcggtagtggaagaagaaacccaaaaccaccaaccggataacga 2851
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 353 tcgccggatgcatcacacggtagtggaagaagaaacccaaaaccaccaaccggataacaa 294
Query: 2852 taatcatcctgtagggattaattcggcttgatgatatagggacttttctggacaatggct 2911
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 293 taatcatcctgtagggattgattcggcttgatgatattgggacttttctggacaatggct 234
Query: 2912 gcctagcttcatccattagtggcagatctgcatcgtcgccatcccaatcaccgccaccct 2971
| | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 233 gtcgagcttcatccattagtggcagatctgcgtcgtcgccgtcccaatcaccgccaccct 174
Query: 2972 cgctcctgacatgctgcaggcgctcctgcttctgcttccagccctccattctctccttcc 3031
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 173 cgctcctgacatgctgcaggcgctcctgcttctgcttccagccctccatcctctccttcc 114
Query: 3032 aggccacgctgccatatccgtaggcggccagatccttggacgggtccatggatctcggtt 3091
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aggccacgctgccgtagccgtaggcggccagatccttggacgggtccatggatctcggtt 54
Query: 3092 gcactggaaggttgggatctgcgaaagggagcgggtggatcctct 3136
||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 53 gcactgggaggttgggatctgcgaaggggagcgggtggatcctct 9
>gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 737 bits (372), Expect = 0.0
Identities = 408/420 (97%)
Strand = Plus / Minus
Query: 2350 gcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggc 2409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggc 369
Query: 2410 tcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttcagac 2469
|| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 368 tcaagattaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagac 309
Query: 2470 aatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctca 2529
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aacgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctca 249
Query: 2530 accggataatccacagaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcc 2589
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 accggataatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcc 189
Query: 2590 tttgtgggatcaaccgtactgacaaagaagtcgattggagcaagctgagagggttgacct 2649
|||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 188 tttgagggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgacct 129
Query: 2650 tccttgtcaaaccttagtgacaaacggtccaggtaagtctctctctcgattggaagccac 2709
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 128 tccttgtcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccac 69
Query: 2710 tttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatg 2769
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 68 tttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatg 9
>gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 722 bits (364), Expect = 0.0
Identities = 502/548 (91%)
Strand = Plus / Minus
Query: 833 ggccctggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgt 892
|||| |||||||||||||| ||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 548 ggccttggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgt 489
Query: 893 tcctccaccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacgg 952
| ||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| || |
Sbjct: 488 ttctccaccagtcatcgatggccacaccactccatctcatttcaaggatgccggtgacag 429
Query: 953 agatgcagatgaaaagtgccatgaaccagatactggccacattggtaagctctggtgtga 1012
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 428 caatgcagatgaaaagtgccatgaaccagatactagcgacattggtaagctctggtgtga 369
Query: 1013 taaacttccccgtgagcaggcagatggcaggcaaggtacagtaagccaggagaggaatgg 1072
|||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 368 taaatttccccgtgagcagacagatggcaggcaaggtacagtaagccaagagaggaatgg 309
Query: 1073 acgtccagggataaacgatggagttgatataagaaaacctttccaggaattttagcccgc 1132
| ||||| || || || || |||||||| |||||||||||||||| |||||||| ||||
Sbjct: 308 atgtccatgggtatacaatagagttgatgtaagaaaacctttccaaaaattttaggccgc 249
Query: 1133 cgccgtacccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaaggg 1192
| || || |||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct: 248 caccatatccgtaccaaagtgggcagtgcttgctgaagaaaatttcaacagatccaagag 189
Query: 1193 cccagcgaaggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatg 1252
|||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 188 cccaacgaaggacctggtgaagccggtcagaaagattcagaggtgcagaacctttgaatg 129
Query: 1253 caggccgcttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccag 1312
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 128 caggccgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatcttaaatccag 69
Query: 1313 tcaagatatcctctgtgatcgatccataaatccagccaatctcttttccccagtcggtct 1372
|||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 68 tcaagatatcctctgtaattgatccataaatccagccaatctctttcccccagtcagtct 9
Query: 1373 tgtcttcg 1380
||||||||
Sbjct: 8 tgtcttcg 1
>gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 418
Score = 688 bits (347), Expect = 0.0
Identities = 395/411 (96%)
Strand = Plus / Minus
Query: 2700 tggaagccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagat 2759
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 418 tggaagccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagat 359
Query: 2760 tacagatatgagccacaatgcaaatgcatctttcgccggatgcatcactcggtagtggaa 2819
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 358 aacagatatgagccgcaatgcaaatgcatctttcgccggatgcatcacacggtagtggaa 299
Query: 2820 gaagaaacccaaaaccaccaaccggataacgataatcatcctgtagggattaattcggct 2879
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 298 gaagaaacccaaaaccaccaaccggataacaataatcatcctgtagggattgattcggct 239
Query: 2880 tgatgatatagggacttttctggacaatggctgcctagcttcatccattagtggcagatc 2939
||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 238 tgatgatattgggacttttctggacaatggctgtcgagcttcatccattagtggcagatc 179
Query: 2940 tgcatcgtcgccatcccaatcaccgccaccctcgctcctgacatgctgcaggcgctcctg 2999
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 178 tgcgtcgtcgccgtcccaatcaccgcctccctcgctcctgacatgctgcaggcgctcctg 119
Query: 3000 cttctgcttccagccctccattctctccttccaggccacgctgccatatccgtaggcggc 3059
||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 118 cttctgcttccagccctccatcctctccttccaggccacgctgccgtagccgtaggcggc 59
Query: 3060 cagatccttggacgggtccatggatctcggttgcactggaaggttgggatc 3110
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 58 cagatccttggacgggtccatggatctcggttgcactgggaggttgggatc 8
>gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 391
Score = 688 bits (347), Expect = 0.0
Identities = 374/383 (97%)
Strand = Plus / Minus
Query: 1827 tttcatgttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaat 1886
|||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 391 tttcatgttgatatcaaaaaagacgacattcctgtttgcgtatcgatcatgacggtcaat 332
Query: 1887 accaccaaacctctgagggaactgtacatagcacactttcttccccaccaaaggatccat 1946
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 accatcaaacctctgagggaactggacatagcacactttcttccccaccaaaggatccat 272
Query: 1947 catgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaa 2006
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 271 catgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacaatccaa 212
Query: 2007 gttcaataggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggc 2066
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gttcaataggtacggagcatttgataagacagcagagacacggaccagtgcattcatggc 152
Query: 2067 accagccttcttgtgatggttataacctggcctcttttctctcgagacataaacaaggcg 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 accagccttcttgtgatggttataacctggcctcttttctctcgagacataaacaaggcg 92
Query: 2127 aggcaactcatttccttccacatcacgaccaccactttggccaaggaatacctgaatcat 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 aggcaactcatttccttccacatcacgaccaccactttggccaaggaatacctgaatcat 32
Query: 2187 tccaggatgatcgcgtacgttgt 2209
|||||||||||||||||||||||
Sbjct: 31 tccaggatgatcgcgtacgttgt 9
>gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 678 bits (342), Expect = 0.0
Identities = 498/550 (90%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| || || || | ||||||||| ||||| ||||
Sbjct: 550 agttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaatgggt 491
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 490 cgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacga 431
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacga 598
|||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct: 430 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatga 371
Query: 599 tcacccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgt 658
|||||||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 370 tcacccagaacgcgaagaagagcttcccgaagagaggaccccatgactcgtacccgttgt 311
Query: 659 tgatcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcg 718
|||||||||||||||| || ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 310 tgatcgcgttcgagattccagccacgaccccgatgaagttgagcaggagaagcgtggtgg 251
Query: 719 ggggtatcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccc 778
| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 250 gaggtatcaacagggtggtccatttgaacgtgtacagctctgagaactcctcgtcgtccc 191
Query: 779 cggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccct 838
||||||| || || |||||||||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 190 cggcctttgatgtgacggtgaagctcgtgtcgataccggcgaggaccttgagaaggcctt 131
Query: 839 ggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcc 898
||||||||||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||
Sbjct: 130 ggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttctcc 71
Query: 899 accagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatgc 958
||||||| ||||||||||| |||||||| |||||||| ||||||||||| || | |||||
Sbjct: 70 accagtcatcgatggccacaccactccatctcatttcaaggatgccggtgacagcgatgc 11
Query: 959 agatgaaaag 968
||||||||||
Sbjct: 10 agatgaaaag 1
>gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 638 bits (322), Expect = 0.0
Identities = 415/446 (93%)
Strand = Plus / Minus
Query: 1173 aatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcggaaaggttcag 1232
|||||||||||| ||||| ||||| |||||| | |||| ||| ||||| ||||| |||||
Sbjct: 478 aatttcgacagatccaagagcccaacgaaggtcttggtcaagccggtcagaaagattcag 419
Query: 1233 aggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatg 1292
||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 418 aggtgcagaacctttgaatgcagcccgcttcgggatgcagtaaatagaccgccaaccatg 359
Query: 1293 gcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaat 1352
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 358 gcagtgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaat 299
Query: 1353 ctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttcctt 1412
|||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 ctctttcccccagtcagtcttgtcttcgtagccgcagctgattacatgtatagcttcctt 239
Query: 1413 cagaagagaagctggacttgcgctcttcagggtccctccgttctcaagaagtgttgatgc 1472
|||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||
Sbjct: 238 tagaagagaagctggacttgcactcctcagggtcccaccattctcaagaagtgttgatgc 179
Query: 1473 gacaaaaacagaagactgcccaaatttcttctctagtttctgttgatttacaattccggc 1532
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 178 aacaaaaacagatgactgcccaaatttcttttctagtttctgttgatttacaattccagc 119
Query: 1533 cttctcgatatcagcacctggagcaccttcatcaatttcacccaaagcatatgcaggaga 1592
|||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 118 cttctcaacgtcagcacctggagcaccttcctcaatttcacccaaagcatatgcaggaga 59
Query: 1593 tgggttttctgctttcttgaaaaata 1618
|||||||||||||||||||||||||
Sbjct: 58 agggttttctgctttcttgaaaaata 33
>gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_27_H08_A002 3', mRNA sequence
Length = 783
Score = 618 bits (312), Expect = e-175
Identities = 600/696 (86%)
Strand = Plus / Minus
Query: 1692 gcaccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatc 1751
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 698 gcaccactttggccagcagttgcaagtccttgatggtggcttctttgttttgggtgcgtc 639
Query: 1752 ataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttg 1811
||| ||||||| |||||||| ||||| |||||||| ||||| || |||||||| |||||
Sbjct: 638 atagccatataatgcctgcctcctgaagacacatcctgtaccaacgtaaatggggccttg 579
Query: 1812 aataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcg 1871
||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 578 gataccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcg 519
Query: 1872 atcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttccc 1931
||||||||| ||||| ||| | || || ||||| ||||| |||||||| |||||||| ||
Sbjct: 518 atcatgacgatcaatcccatcgaatctttgaggaaactgcacatagcaaactttctttcc 459
Query: 1932 caccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgta 1991
| ||||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||||
Sbjct: 458 aagcaaaggatccatcataaaacacattgcttcctttatagccttactattattgatgta 399
Query: 1992 gtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagacacggac 2051
||||||||| |||||||||| | || | ||||| | || ||||||||||| |||||
Sbjct: 398 gtgatcacaatccaagttcagcaaataaggtgcattagttagtacagcagagactcggac 339
Query: 2052 cagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttctctcga 2111
|| ||||||||| |||||||||||||| ||||||| ||| ||||||| |||||||| ||
Sbjct: 338 caatgcattcatagcaccagccttcttatgatggtcatagcctggccgtttttctcttga 279
Query: 2112 gacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttggccaag 2171
|| ||||| | ||||||| ||||||||||||||| ||| | ||||||||||| |||||
Sbjct: 278 aacgtaaaccaatcgaggcagctcatttccttccacgtcatggccaccactttgaccaag 219
Query: 2172 gaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatc 2231
|| ||||||||||||||||||||||| || || |||||||||||||| || | |||||
Sbjct: 218 aaaaacctgaatcattccaggatgatcacgaacattgtttccaggccatggtgtcccatc 159
Query: 2232 ttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatcct 2291
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 158 ctgcattgtccatccttcctcaggtaccttttgggctttagcaaccaaggcattgattct 99
Query: 2292 taccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaagcagc 2351
||||||||||||||||| ||||||||||| || |||| || ||||| || | ||
Sbjct: 98 aaccttgaattcctcgtactctctcttcattgctctccgttctctaacgaagtttggcgc 39
Query: 2352 aaccttgtctttcaggtagtctatcttctgttggaa 2387
|||||||||||||||||||||||||||||||||||
Sbjct: 38 caccttgtctttcaggtagtctatcttctgttggaa 3
>gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 419
Score = 611 bits (308), Expect = e-172
Identities = 379/403 (94%)
Strand = Plus / Minus
Query: 2307 gtattctctcttcatcgccctcctctccctaacaaatgaagcagcaaccttgtctttcag 2366
||||||| | ||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 412 gtattctgtattcattgccctcctttccctaacaaatgaagcggcaaccttgtctttcag 353
Query: 2367 gtagtctatcttctgttggaagtaccactcaggagcacgaggctcgatattaaacttttt 2426
||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 352 gtagtgtatcttntgttggaagtaccactcagtagcacgaggctcaagattaaacttttt 293
Query: 2427 gctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacgtaag 2486
|| ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 292 gcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaaggtaag 233
Query: 2487 cattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccacaga 2546
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 232 cattgcagcaccatcatcagaaacatagcaggagaccttagtaaccggataatccacgga 173
Query: 2547 aaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgtgggatcaaccgt 2606
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 172 aaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgagggatcaaccgt 113
Query: 2607 actgacaaagaagtcgattggagcaagctgagagggttgaccttccttgtcaaaccttag 2666
| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aatgacaaagaagtcaatcggagcaagctgagagggttgaccttccttgtcaaaccttag 53
Query: 2667 tgacaaacggtccaggtaagtctctctctcgattggaagccac 2709
||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 52 tgacaaacggtccaggtaagtctctctttcaattggaagccac 10
>gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 611 bits (308), Expect = e-172
Identities = 380/404 (94%)
Strand = Plus / Minus
Query: 1216 cggtcggaaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaa 1275
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cggtcagaaagattcagaggtgcagaacctttgaatgcaggccgcttcgggatgcagtaa 396
Query: 1276 atagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgat 1335
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 395 atagaccgccaaccatggcagtgcatcttaaatccagtcaagatatcctctgtaattgat 336
Query: 1336 ccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgata 1395
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 335 ccataaatccagccaatctctttcccccagtcagtcttgtcttcgtagccgcagctgatt 276
Query: 1396 acatgtatagcttccttcagaagagaagctggacttgcgctcttcagggtccctccgttc 1455
||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||
Sbjct: 275 acatgtatagcttcctttagaagagaagctggacttgcactcctcagggtcccaccattc 216
Query: 1456 tcaagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagtttctgt 1515
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 215 tcaagaagtgttgatgcaacaaaaacagatgactgcccaaatttcttttctagtttctgt 156
Query: 1516 tgatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatttcaccc 1575
||| |||||||||| |||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 155 tgacttacaattccagccttctcaacgtcagcacctggagcaccttcctcaatttcaccc 96
Query: 1576 aaagcatatgcaggagatgggttttctgctttcttgaaaaataa 1619
||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 95 aaagcatatgcaggagaagggttttctgctttcttgaaaaataa 52
>gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 5', mRNA sequence
Length = 752
Score = 579 bits (292), Expect = e-163
Identities = 331/344 (96%)
Strand = Plus / Minus
Query: 1675 ctgcagcagcaagagaggcaccacttgggccagcagttgcaagttcttgatggtggcttc 1734
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctgcagcagcaagagagacaccacttgggccagcagttgcaagttcttgatggtggcttc 293
Query: 1735 tttgttttaggagcatcataaccatatagtgcctgccgtctgaaaacacatccagtaccc 1794
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 292 ttcgttttaggagcatcataaccatacagtgcctgccgtctgaaaacacatccagtaccc 233
Query: 1795 acataaatgggcccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacg 1854
||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 232 acatagatgggtccttgaataccgtccaaacctttcatgttgatatcaaaaaagacgacg 173
Query: 1855 ttcctgttagcatatcgatcatgacggtcaataccaccaaacctctgagggaactgtaca 1914
|||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 172 ttcctgtttgtgtatcgatcatgacggtcaataccatcaaacctctgagggaactggaca 113
Query: 1915 tagcacactttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggcc 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tagcacactttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggcc 53
Query: 1975 ttgctattgttgatgtagtgatcacagtccaagttcaataggta 2018
|||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 52 ttgctattgttgatgtagtgatcacaatccaagttcaataggta 9
Score = 515 bits (260), Expect = e-144
Identities = 323/344 (93%)
Strand = Plus / Minus
Query: 1275 aatagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcga 1334
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 752 aatagaccgccaaccatggcagtgcatcttaaatccagtcaagatatcctctgtaattga 693
Query: 1335 tccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgat 1394
|||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 692 tccataaatccagccaatctctttcccccagtcagtctagtcttcgtagccgcagctgat 633
Query: 1395 aacatgtatagcttccttcagaagagaagctggacttgcgctcttcagggtccctccgtt 1454
||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||
Sbjct: 632 tacatgtatagcttcctttagaagagaagctggacttgcactcctcagggtcccaccatt 573
Query: 1455 ctcaagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagtttctg 1514
|||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 572 ctcaagaagtgttgatgcaacaaaaacagatgactgcccaaatttcttttctagtttctg 513
Query: 1515 ttgatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatttcacc 1574
||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 512 ttgatttacaattccagccttctcaacgtcagcacctggagcaccttcctcaatttcacc 453
Query: 1575 caaagcatatgcaggagatgggttttctgctttcttgaaaaata 1618
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 452 caaagcatatgcaggagaagggttttctgctttcttgaaaaata 409
>gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 540
Score = 476 bits (240), Expect = e-132
Identities = 465/540 (86%)
Strand = Plus / Minus
Query: 1967 ttatggccttgctattgttgatgtagtgatcacagtccaagttcaataggtatgcagcat 2026
|||| ||||| ||||| ||||||||||||||||| |||||||||| | || | ||||
Sbjct: 540 ttatagccttactattattgatgtagtgatcacaatccaagttcagcaaataaggtgcat 481
Query: 2027 ttgataagacagcagagacacggaccagtgcattcatggcaccagccttcttgtgatggt 2086
| | || ||||||||||| ||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 480 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttatgatggt 421
Query: 2087 tataacctggcctcttttctctcgagacataaacaaggcgaggcaactcatttccttcca 2146
||| ||||||| |||||||| || || ||||| | ||||||| ||||||||||||||
Sbjct: 420 catagcctggccgtttttctcttgaaacgtaaaccaatcgaggcagctcatttccttcca 361
Query: 2147 catcacgaccaccactttggccaaggaatacctgaatcattccaggatgatcgcgtacgt 2206
| ||| | ||||||||||| ||||| || ||||||||||||||||||||||| || || |
Sbjct: 360 cgtcatggccaccactttgaccaagaaaaacctgaatcattccaggatgatcacgaacat 301
Query: 2207 tgtttccaggccaggggcttccatcttgcattgtccatccttcctcaggaaccttttggg 2266
||||||||||||| || | ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 300 tgtttccaggccatggtgtcccatcctgcattgtccatccttcctcaggtaccttttggg 241
Query: 2267 cttttgcaaccaaggcattgatccttaccttgaattcctcgtattctctcttcatcgccc 2326
|||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| || |
Sbjct: 240 ctttagcaaccaaggcattgattctaaccttgaattcctcgtactctctcttcattgctc 181
Query: 2327 tcctctccctaacaaatgaagcagcaaccttgtctttcaggtagtctatcttctgttgga 2386
||| || ||||| || | || |||||||||||||||||||||||||| |||||||
Sbjct: 180 tccgttctctaacgaagtttggcgccaccttgtctttcaggtagtctatcttttgttgga 121
Query: 2387 agtaccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttct 2446
| |||||||| |||||||||||||| | || || |||||| |||||||||||||||||
Sbjct: 120 aataccactctggagcacgaggctcaaggctataccttttgcagaaaggaacccatttct 61
Query: 2447 ttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcag 2506
|||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 60 ttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcag 1
>gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_18_C04_A002 5', mRNA sequence
Length = 627
Score = 470 bits (237), Expect = e-130
Identities = 516/609 (84%)
Strand = Plus / Minus
Query: 2423 ttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaacg 2482
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 609 ttttgcagaaaggaacccatttctttgcaaattcagatgtctcagacaatgcttcaaatg 550
Query: 2483 taagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatcca 2542
| ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct: 549 tcagcatggcagcaccatcatcagaaacatagcatgaaaccttatcaactggataatcca 490
Query: 2543 cagaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgtgggatcaa 2602
| ||| |||| || || ||||| || |||||| | || ||||||||||| ||||||||
Sbjct: 489 ccgaatggatagatagaacagtatttgctgtgcctaatggaggttccttcaagggatcaa 430
Query: 2603 ccgtactgacaaagaagtcgattggagcaagctgagagggttgaccttccttgtcaaacc 2662
|||||||||||||||| || || || || || ||||| || || ||||||||||||||||
Sbjct: 429 ccgtactgacaaagaaatccataggggcgagttgagaaggctgcccttccttgtcaaacc 370
Query: 2663 ttagtgacaaacggtccaggtaagtctctctctcgattggaagccactttgggaactgat 2722
| | | || ||||| || || || || |||||||| |||| ||||||||| |||||||
Sbjct: 369 tcaaagtcagccggtcaagataggtttccctctcgataggaaaccactttggaaactgat 310
Query: 2723 caagaatccaggacatcgcaaaccagatttcacagattacagatatgagccacaatgcaa 2782
|||||||||| ||||| |||||||| ||||||||||| |||||||||||||| || ||||
Sbjct: 309 caagaatccaagacatggcaaaccaaatttcacagatcacagatatgagccataaagcaa 250
Query: 2783 atgcatctttcgccggatgcatcactcggtagtggaagaagaaacccaaaaccaccaacc 2842
||||||| | ||||||||||||||||||||||||||||||| ||||||||||| | ||
Sbjct: 249 atgcatcaggcaccggatgcatcactcggtagtggaagaagaaccccaaaaccactagcc 190
Query: 2843 ggataacgataatcatcctgtagggattaattcggcttgatgatatagggacttttctgg 2902
| || | |||||||||||| ||||| || ||| ||||||| | | || | |||||||
Sbjct: 189 gaattatgataatcatcctataggggttgatttggcttgaaggaagcggaatctttctgg 130
Query: 2903 acaatggctgcctagcttcatccattagtggcagatctgcatcgtcgccatcccaatcac 2962
|||||||||| |||||||||||||||||||| ||||||||||| |||||||| | ||
Sbjct: 129 acaatggctgtctagcttcatccattagtggtagatctgcatcatcgccatcatcgttac 70
Query: 2963 cgccaccctcgctcctgacatgctgcaggcgctcctgcttctgcttccagccctccattc 3022
| ||||| ||| |||| | || |||| | |||||||||||||||||||| |||||| |
Sbjct: 69 caccaccgtcgttcctcgcctggtgcatcctctcctgcttctgcttccagctctccatcc 10
Query: 3023 tctccttcc 3031
|||||||||
Sbjct: 9 tctccttcc 1
>gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483110, DNA
sequence
Length = 706
Score = 456 bits (230), Expect = e-126
Identities = 260/270 (96%)
Strand = Plus / Plus
Query: 2659 aaccttagtgacaaacggtccaggtaagtctctctctcgattggaagccactttgggaac 2718
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 192 aaccttagtgacaaacggtccaggtaggtctctctctcaattggaagccactttgggaac 251
Query: 2719 tgatcaagaatccaggacatcgcaaaccagatttcacagattacagatatgagccacaat 2778
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 tgatcaagaatccaggacatggcaaaccagatttcacagataacagatatgagccacaat 311
Query: 2779 gcaaatgcatctttcgccggatgcatcactcggtagtggaagaagaaacccaaaaccacc 2838
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 312 gcaaatgcatctttcgccggatgcatcacacggtagtggaagaagaaacccaaaaccacc 371
Query: 2839 aaccggataacgataatcatcctgtagggattaattcggcttgatgatatagggactttt 2898
||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 372 aaccggataacaataatcatcctgtagggattgattcggcttgatgatattgggactttt 431
Query: 2899 ctggacaatggctgcctagcttcatccatt 2928
|||||||||||||| | |||||||||||||
Sbjct: 432 ctggacaatggctgtcgagcttcatccatt 461
Score = 176 bits (89), Expect = 1e-041
Identities = 98/101 (97%)
Strand = Plus / Plus
Query: 2563 gtgttcgctgtgaccaagggaggttcctttgtgggatcaaccgtactgacaaagaagtcg 2622
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtgttcgctgtgaccaagggaggttcctttgagggatcaaccgtactgacaaagaagtca 60
Query: 2623 attggagcaagctgagagggttgaccttccttgtcaaacct 2663
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataggagcaagctgagagggttgaccttccttgtcaaacct 101
>gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_F12_A002 5', mRNA sequence
Length = 704
Score = 416 bits (210), Expect = e-114
Identities = 309/342 (90%)
Strand = Plus / Minus
Query: 552 gttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacccagaaggc 611
|||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||
Sbjct: 700 gttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccagaacgc 641
Query: 612 gaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgcgttcga 671
|||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||
Sbjct: 640 gaagaagagcttcccgaagagaggaccccatgactcgtacccgttgttgatcgcgttcga 581
Query: 672 gatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtatcagcag 731
||| || ||||| ||||||||||||||||||||||| |||||||| || || |||| |||
Sbjct: 580 gattccagccacgaccccgatgaagttcagcaggagaagcgtggttggagggatcaacag 521
Query: 732 ggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggccttcgacgt 791
||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct: 520 ggtggtccatttgaacgtgtacagctctgagaactcctcgtcgtccccggcctttgatgt 461
Query: 792 cacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctggaacaccgcgaa 851
|||||||||||||||||||| |||||||| ||||| || ||||| |||||||||| |||
Sbjct: 460 gacggtgaagctcgtgtcgataccggcgaggaccttgagaaggccttggaacaccgtgaa 401
Query: 852 cagatgcgccgaaacgcctccgatgacccagaactgctcgtt 893
||||| || ||||| ||||| ||||||||||||||||||||
Sbjct: 400 gagatgtgcggaaacacctccaatgacccagaactgctcgtt 359
Score = 387 bits (195), Expect = e-105
Identities = 297/331 (89%)
Strand = Plus / Minus
Query: 914 ccacgccactccacctcatttccaggatgccggtcacggagatgcagatgaaaagtgcca 973
|||| |||||||| |||||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 338 ccacaccactccatctcatttcaaggatgccggtgacagcaatgcagatgaaaagtgcca 279
Query: 974 tgaaccagatactggccacattggtaagctctggtgtgataaacttccccgtgagcaggc 1033
||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 278 tgaaccagatactagcgacattggtaagctctggtgtgataaatttccccgtgagcagac 219
Query: 1034 agatggcaggcaaggtacagtaagccaggagaggaatggacgtccagggataaacgatgg 1093
||||||||||||||||||||||||||| |||||||||||| ||||| || || || || |
Sbjct: 218 agatggcaggcaaggtacagtaagccaagagaggaatggatgtccatgggtatacaatag 159
Query: 1094 agttgatataagaaaacctttccaggaattttagcccgccgccgtacccgtaccaaagtg 1153
||||||| |||||||||||||||| |||||||| ||||| || || |||||||||||||
Sbjct: 158 agttgatgtaagaaaacctttccaaaaattttaggccgccaccatatccgtaccaaagtg 99
Query: 1154 ggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaa 1213
|||||||| |||||||||||||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 98 ggcagtgcatgctgaagaaaatttcaacagatccaagagcccaacgaaggacctggtgaa 39
Query: 1214 gacggtcggaaaggttcagaggcgcagaacc 1244
| ||||| ||||| |||||||| ||||||||
Sbjct: 38 gccggtcagaaagattcagaggtgcagaacc 8
>gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517674, DNA
sequence
Length = 595
Score = 414 bits (209), Expect = e-113
Identities = 277/300 (92%), Gaps = 6/300 (2%)
Strand = Plus / Plus
Query: 3290 gcgccctgagcatggactcggcgacgtactgcgggtcgtcctcgtg------ggcggcgc 3343
||||||||||||||||||| ||||||||||||||||| |||||||| || | |||
Sbjct: 1 gcgccctgagcatggactccgcgacgtactgcgggtcatcctcgtgcccgccggggccgc 60
Query: 3344 cgtcctgcaggccgaactcgccctccaggtcgtcgacgccgtcctcctcctcgtcgccgg 3403
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 cgccctgcaggccgaactcgccctccaggtcgtcgacgccgtcctcctcctcgtcgcccg 120
Query: 3404 ccacccgcgggcagcccttgaggcgcttgtagcgggtcctgcactgcgggcacgcttgcg 3463
|||| |||||||| ||||||||||||||||| || |||| ||||||||||||||| ||||
Sbjct: 121 ccacgcgcgggcaccccttgaggcgcttgtaccgtgtccggcactgcgggcacgcctgcg 180
Query: 3464 agccctcgcggcgctcgtactcgtagcaggcgcggcagacggggaaggcgcactcgttgc 3523
| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 181 acccctcacggcgctcgtactcgtagcaggcgcggcacaccgggaaggcgcactcgttgc 240
Query: 3524 acgccacgaagggctccccgtcgaagcccaccccgacctcgtcgccgcatatctggcacg 3583
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 acgccacgaagggctccccgtcgaagcccaccccgacctcgtccccgcatatctggcacg 300
Score = 125 bits (63), Expect = 3e-026
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 3634 tcgcggcggatcaccaccagctcgttccggttatgcgagccggccaccagccccgcgcta 3693
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 354 tcgcggcggatcaccaccagctcgttccggttgtgcgagccggccaccagccccgcgctc 413
Query: 3694 gcctccatctc 3704
|||||||||||
Sbjct: 414 gcctccatctc 424
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3750 cgcggcggcggcacagcgaaatgcacgtagtcctcc 3785
|||||||||||||||| |||||| | ||||||||||
Sbjct: 454 cgcggcggcggcacagggaaatgtaggtagtcctcc 489
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3858 gcgcggcgccgctctgggctg 3878
|||||||||||||||||||||
Sbjct: 560 gcgcggcgccgctctgggctg 580
>gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_F01_A002 5', mRNA sequence
Length = 591
Score = 392 bits (198), Expect = e-107
Identities = 393/458 (85%)
Strand = Plus / Minus
Query: 2488 attgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccacagaa 2547
||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||| | |
Sbjct: 591 attgcggcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgca 532
Query: 2548 aggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgtgggatcaaccgta 2607
||||| || || ||||| || ||||||||||| |||||||||||| |||||||| |||
Sbjct: 531 aggatagacagaacagtatttgctgtgaccaaaggaggttcctttaacggatcaactgta 472
Query: 2608 ctgacaaagaagtcgattggagcaagctgagagggttgaccttccttgtcaaaccttagt 2667
|||||||| || || ||||||||||| ||||| || || ||||||||||||||||| |||
Sbjct: 471 ctgacaaaaaaatcaattggagcaagttgagatggctggccttccttgtcaaacctcagt 412
Query: 2668 gacaaacggtccaggtaagtctctctctcgattggaagccactttgggaactgatcaaga 2727
|||| || || ||||||||||||||||| || || |||||||||||| |||||||||
Sbjct: 411 gacagccgatctaggtaagtctctctctcaataggggaccactttgggaattgatcaaga 352
Query: 2728 atccaggacatcgcaaaccagatttcacagattacagatatgagccacaatgcaaatgca 2787
||||| ||||| |||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 351 atccaagacatggcaaaccagatttcacagataaccgatatgagccacaaagcaaatgca 292
Query: 2788 tctttcgccggatgcatcactcggtagtggaagaagaaacccaaaaccaccaaccggata 2847
|| ||| ||||||||||||||||||||||||||||||| ||||||||||| | ||| |||
Sbjct: 291 tcattcaccggatgcatcactcggtagtggaagaagaaccccaaaaccacaagccgaata 232
Query: 2848 acgataatcatcctgtagggattaattcggcttgatgatatagggacttttctggacaat 2907
| |||||||||||| || ||||| || ||||||||| || || | ||| |||||||
Sbjct: 231 atgataatcatcctatatggattgatctggcttgatggaatcggaattttcctggacagc 172
Query: 2908 ggctgcctagcttcatccattagtggcagatctgcatc 2945
|| || || ||||||||||||||||| ||||| |||||
Sbjct: 171 ggttgtcttgcttcatccattagtggtagatcagcatc 134
>gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H04_A002 5', mRNA sequence
Length = 723
Score = 387 bits (195), Expect = e-105
Identities = 354/407 (86%)
Strand = Plus / Minus
Query: 1692 gcaccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatc 1751
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 423 gcaccacttcggccagcagttgcaagtccttgatggtggcttctttgttttgggggcatc 364
Query: 1752 ataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttg 1811
||||||||||| |||||||| ||| || |||||||||||||| |||||||| || || ||
Sbjct: 363 ataaccatataatgcctgccttctaaatacacatccagtaccgacataaatcggaccctg 304
Query: 1812 aataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcg 1871
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct: 303 aataccatccaaacctttcatattgatatcgaaaaagacaacattcctgttagcatatcg 244
Query: 1872 atcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttccc 1931
||||| || ||| | ||| |||| || |||||||||||||||||||| || ||||| ||
Sbjct: 243 gtcatggcgatcagtcccatcaaatctttgagggaactgtacatagcaaaccttctttcc 184
Query: 1932 caccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgta 1991
| ||||| |||||||| |||||||| || || ||||| |||||||| |||||||||||
Sbjct: 183 tagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgta 124
Query: 1992 gtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagacacggac 2051
||||||||| |||||||| | | |||| |||||||| || ||||||||||| |||||
Sbjct: 123 gtgatcacaatccaagtttagcaaatatggagcatttgttagtacagcagagactcggac 64
Query: 2052 cagtgcattcatggcaccagccttcttgtgatggttataacctggcc 2098
|| ||||||||| |||||||| ||||| ||||||| ||| |||||||
Sbjct: 63 caatgcattcatagcaccagctttcttatgatggtcatagcctggcc 17
Score = 182 bits (92), Expect = 2e-043
Identities = 191/224 (85%)
Strand = Plus / Minus
Query: 1396 acatgtatagcttccttcagaagagaagctggacttgcgctcttcagggtccctccgttc 1455
|||||||||||||| |||| ||||||||| |||||||| ||||||| ||| || || |||
Sbjct: 722 acatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccattc 663
Query: 1456 tcaagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagtttctgt 1515
|| || ||||| |||| ||||| ||||||||||| ||||||||||| |||| ||| |||
Sbjct: 662 tcgagcagtgtggatgtaacaaagacagaagactgaccaaatttcttttctaatttttgt 603
Query: 1516 tgatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatttcaccc 1575
||||||||||| || || || || | ||||| ||||||||| ||||||||||||||||
Sbjct: 602 tgatttacaataccagctttttcattctcagctcctggagcagcttcatcaatttcacca 543
Query: 1576 aaagcatatgcaggagatgggttttctgctttcttgaaaaataa 1619
| |||||||||||| ||| | |||||| ||||||||||||||||
Sbjct: 542 agagcatatgcaggggattgattttcttctttcttgaaaaataa 499
>gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483110, DNA
sequence
Length = 643
Score = 383 bits (193), Expect = e-104
Identities = 220/229 (96%)
Strand = Plus / Minus
Query: 2700 tggaagccactttgggaactgatcaagaatccaggacatcgcaaaccagatttcacagat 2759
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 640 tggaagccacttggggaactgatcaagaatccaggacatggcaaaccagatttcacagat 581
Query: 2760 tacagatatgagccacaatgcaaatgcatctttcgccggatgcatcactcggtagtggaa 2819
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 580 aacagatatgagccacaatgcaaatgcatctttcgccggatgcatcacacggtagtggaa 521
Query: 2820 gaagaaacccaaaaccaccaaccggataacgataatcatcctgtagggattaattcggct 2879
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 520 gaagaaacccaaaaccaccaaccggataacaataatcatcctgtagggattgattcggct 461
Query: 2880 tgatgatatagggacttttctggacaatggctgcctagcttcatccatt 2928
||||||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 460 tgatgatattgggacttttctggacaatggctgtcgagcttcatccatt 412
>gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 3', mRNA sequence
Length = 677
Score = 341 bits (172), Expect = 3e-091
Identities = 235/256 (91%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| | || || | ||||||||| ||||||||||
Sbjct: 264 agttgcagtccagaccacactcctccagaaaaggtccatcgctcttggcaaggaacgggt 205
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 204 cgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacga 145
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacga 598
|||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct: 144 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatga 85
Query: 599 tcacccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgt 658
|||||||||| |||||||||||||||||||| || || ||||| ||||||||||||||||
Sbjct: 84 tcacccagaacgcgaagaagagcttcccgaaaagaggaccccatgactcgtacccgttgt 25
Query: 659 tgatcgcgttcgagat 674
||||||||||||||||
Sbjct: 24 tgatcgcgttcgagat 9
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 136 aaaagaatcaaactcctaaccaatatgtcctttgtcgctaatatacagactgtaaaaagg 195
||||||||||| |||||||||||| ||| | |||| ||||||||||| |||||||| ||
Sbjct: 676 aaaagaatcaa-ctcctaaccaatctgttc-ttgttgctaatataca-actgtaaatggg 620
Query: 196 gaatacactgggca 209
||||||| ||||||
Sbjct: 619 gaatacaatgggca 606
>gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 363
Score = 289 bits (146), Expect = 1e-075
Identities = 299/350 (85%)
Strand = Plus / Minus
Query: 1219 tcggaaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaata 1278
|||||||| || ||||| |||||||||| || || | ||| || || |||||||||||
Sbjct: 358 tcggaaagattgagaggtgcagaaccttgcaaagcggcccgtttaggtatgcagtaaatt 299
Query: 1279 gaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatcca 1338
|||||||| |||||||||||||||||||| ||||| | ||||| ||||| | ||||||
Sbjct: 298 gaccgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtaactgatcca 239
Query: 1339 taaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataaca 1398
|||||||| ||||| ||||||||||| || ||||||||||| |||||||| ||||| |||
Sbjct: 238 taaatccaaccaatatcttttccccaatctgtcttgtcttcatagccgcaactgatgaca 179
Query: 1399 tgtatagcttccttcagaagagaagctggacttgcgctcttcagggtccctccgttctca 1458
|||||||||||||||||||||||||||||||| || ||||||||||| || || ||||||
Sbjct: 178 tgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccattctca 119
Query: 1459 agaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagtttctgttga 1518
|||||||| ||||| |||||||| |||||||| ||||||||||| || | || ||||||
Sbjct: 118 agaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttttgttga 59
Query: 1519 tttacaattccggccttctcgatatcagcacctggagcaccttcatcaat 1568
|||||||| | ||||| || | ||||| ||||||||| ||||||||||
Sbjct: 58 tttacaatactagccttttcattttcagctcctggagcagcttcatcaat 9
>gb|CW068735.1|CW068735 104_317_10525278_1_30096 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10525278, DNA sequence
Length = 678
Score = 287 bits (145), Expect = 4e-075
Identities = 163/169 (96%)
Strand = Plus / Plus
Query: 2929 agtggcagatctgcatcgtcgccatcccaatcaccgccaccctcgctcctgacatgctgc 2988
|||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 224 agtggcagatctgcgtcgtcgccgtcccaatcaccgcctccctcgctcctgacatgctgc 283
Query: 2989 aggcgctcctgcttctgcttccagccctccattctctccttccaggccacgctgccatat 3048
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 284 aggcgctcctgcttctgcttccagccctccatcctctccttccaggccacgctgccgtag 343
Query: 3049 ccgtaggcggccagatccttggacgggtccatggatctcggttgcactg 3097
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ccgtaggcggccagatccttggacgggtccatggatctcggttgcactg 392
Score = 200 bits (101), Expect = 7e-049
Identities = 110/113 (97%)
Strand = Plus / Plus
Query: 3095 ctggaaggttgggatctgcgaaagggagcgggtggatcctcttgcccccgccgccgccgc 3154
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctgggaggttgggatctgcgaaggggagcgggtggatcctcttgcccccgccgccgccgc 555
Query: 3155 cgctcatgtaggacggcacgagcgcgtgctgctccggcgggatgtcatcaacc 3207
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cgcccatgtaggacggcacgagcgcgtgctgctccggcgggatgtcatcaacc 608
>gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_B05_A002 5', mRNA sequence
Length = 728
Score = 278 bits (140), Expect = 4e-072
Identities = 560/700 (80%)
Strand = Plus / Minus
Query: 547 gtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacccag 606
|||||||| ||||| || |||| ||| |||||||| || ||||| ||||| ||||||||
Sbjct: 713 gtcctgttttgccttccaaccaaacctttgaggaagggatacagatggacaatcacccaa 654
Query: 607 aaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgcg 666
|| || |||||||||||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct: 653 aatgcaaagaagagcttcccaaagaggggaccccatgactcatatccgttattgattgcg 594
Query: 667 ttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtatc 726
|| || | || || ||||| || |||||||||| ||||| | ||||| || ||||||
Sbjct: 593 ttggaaacaccagcaaccacaccaatgaagttcaataggagcaaagtggtaggaggtatc 534
Query: 727 agcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggccttc 786
| | ||| ||||| ||||| || |||||||| ||||||||||| || || || ||||
Sbjct: 533 aataaggtagtccatttgaatgtatacagctctgagaactcctcatcatctccacccttt 474
Query: 787 gacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctggaacacc 846
|| ||||| |||||||| || || | || || | ||||| || || |||||||||||
Sbjct: 473 gatgtcacagtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacaca 414
Query: 847 gcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcg 906
|| || || |||| || || ||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 413 gcaaagaggtgcgaggacacacctccaatgacccagaactgctcattcctccaccaatca 354
Query: 907 tcgatggccacgccactccacctcatttccaggatgccggtcacggagatgcagatgaaa 966
|| || | || |||||||| |||||||| ||||||| || | | ||||| || ||
Sbjct: 353 tcaattccaacaccactccatctcatttctaggatgcttgtagcaaaaatgcaaataaag 294
Query: 967 agtgccatgaaccagatactggccacattggtaagctctggtgtgataaacttccccgtg 1026
|||| ||||||||| | ||||| ||||| | | |||||| |||||||| ||||||||
Sbjct: 293 agtgacatgaaccacaggctggcaacattattcaactctggagtgataaatttccccgtc 234
Query: 1027 agcaggcagatggcaggcaaggtacagtaagccaggagaggaatggacgtccagggataa 1086
| | || ||||||||||| ||||||||||||| || ||||| || ||||| |||||
Sbjct: 233 aataaacaaatggcaggcaatgtacagtaagccaaaaggggaatagatgtccaaggatac 174
Query: 1087 acgatggagttgatataagaaaacctttccaggaattttagcccgccgccgtacccgtac 1146
|| ||||||||||| || ||||| |||||||| ||||| || || ||||| ||||| |||
Sbjct: 173 acaatggagttgatgtaggaaaatctttccagaaatttcaggccaccgccatacccatac 114
Query: 1147 caaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcgaaggacc 1206
||||| ||||| || ||||||||||| ||||| | ||||||||| ||||| ||||| |||
Sbjct: 113 caaagagggcaatgattgctgaagaagatttcaatagacccaagagcccaacgaagcacc 54
Query: 1207 tggtgaagacggtcggaaaggttcagaggcgcagaacctt 1246
||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 53 tggtgaagacgatctgaaagattcagaggtgcagaacctt 14
>gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 777
Score = 274 bits (138), Expect = 6e-071
Identities = 394/478 (82%), Gaps = 6/478 (1%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || |||||||| ||||||||||| | |||||||| || || || || ||
Sbjct: 550 gacccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtggg 491
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 490 cgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgaccca 431
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
||| |||||||||||||| ||||| || |||||||| |||| ||||||||||||||| ||
Sbjct: 430 gaatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggc 371
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || || ||
Sbjct: 370 gtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggat 311
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 310 gaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggt 251
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||||
Sbjct: 250 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 191
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcca 899
| || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 190 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 131
Query: 900 ccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||| || |||||| ||| || ||||||| ||| ||||||||||| ||| || |||||
Sbjct: 130 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatg 73
>gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500738, DNA
sequence
Length = 854
Score = 274 bits (138), Expect = 6e-071
Identities = 394/478 (82%), Gaps = 6/478 (1%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || |||||||| ||||||||||| | |||||||| || || || || ||
Sbjct: 187 gacccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtggg 246
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 247 cgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgaccca 306
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
||| |||||||||||||| ||||| || |||||||| |||| ||||||||||||||| ||
Sbjct: 307 gaatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggc 366
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || || ||
Sbjct: 367 gtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggat 426
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 427 gaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggt 486
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||||
Sbjct: 487 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 546
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcca 899
| || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 547 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 606
Query: 900 ccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||| || |||||| ||| || ||||||| ||| ||||||||||| ||| || |||||
Sbjct: 607 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatg 664
>gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 601
Score = 274 bits (138), Expect = 6e-071
Identities = 394/478 (82%), Gaps = 6/478 (1%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || |||||||| ||||||||||| | |||||||| || || || || ||
Sbjct: 106 gacccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtggg 165
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 166 cgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgaccca 225
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
||| |||||||||||||| ||||| || |||||||| |||| ||||||||||||||| ||
Sbjct: 226 gaatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggc 285
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || || ||
Sbjct: 286 gtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggat 345
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 346 gaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggt 405
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||||
Sbjct: 406 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 465
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcca 899
| || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 466 cacgacagcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 525
Query: 900 ccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||| || |||||| ||| || ||||||| ||| ||||||||||| ||| || |||||
Sbjct: 526 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatg 583
>gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 685
Score = 274 bits (138), Expect = 6e-071
Identities = 394/478 (82%), Gaps = 6/478 (1%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || |||||||| ||||||||||| | |||||||| || || || || ||
Sbjct: 510 gacccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtggg 451
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 450 cgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgaccca 391
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
||| |||||||||||||| ||||| || |||||||| |||| ||||||||||||||| ||
Sbjct: 390 gaatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggc 331
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || || ||
Sbjct: 330 gtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggat 271
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 270 gaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggt 211
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||||
Sbjct: 210 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 151
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcca 899
| || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 150 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctcca 91
Query: 900 ccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||| || |||||| ||| || ||||||| ||| ||||||||||| ||| || |||||
Sbjct: 90 ccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatg 33
>gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 558
Score = 268 bits (135), Expect = 4e-069
Identities = 186/203 (91%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| || || || | ||||||||| ||||| ||||
Sbjct: 203 agttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaatgggt 144
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 143 cgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacga 84
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacga 598
|||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct: 83 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatga 24
Query: 599 tcacccagaaggcgaagaagagc 621
|||||||||| ||||||||||||
Sbjct: 23 tcacccagaacgcgaagaagagc 1
>gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 476
Score = 266 bits (134), Expect = 1e-068
Identities = 185/202 (91%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| || || || | ||||||||| ||||| ||||
Sbjct: 202 agttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaatgggt 143
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 142 cgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacga 83
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacga 598
|||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct: 82 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatga 23
Query: 599 tcacccagaaggcgaagaagag 620
|||||||||| |||||||||||
Sbjct: 22 tcacccagaacgcgaagaagag 1
>gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 721
Score = 264 bits (133), Expect = 6e-068
Identities = 429/525 (81%), Gaps = 2/525 (0%)
Strand = Plus / Minus
Query: 484 cggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtc 543
|||||||| || ||||||||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 529 cggacccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgtt 470
Query: 544 ggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacc 603
||||| |||||||||||||| ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 469 ggcgttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacc 410
Query: 604 cagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatc 663
|| || || ||||||||||||||||||||||| ||||| || || || || ||||||||
Sbjct: 409 caaaatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgatt 350
Query: 664 gcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggt 723
|| || || | || || || || || ||||| ||||| || || || |||||||| |||
Sbjct: 349 gcattggaaacgccagctactactccaatgaaattcagtagaagcagggtggtcggaggt 290
Query: 724 atcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggcc 783
||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 289 atcagaagggttgtccatttgaatgtgtacagctctgagaactcctcgtcgtctccaccc 230
Query: 784 ttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctggaac 843
|| || ||||| |||||||||||||| | || || | ||||| || || || ||||||
Sbjct: 229 ttggatgtcacagtgaagctcgtgtctacaccagctatgaccttgaggagtccttggaac 170
Query: 844 accgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccag 903
|| || || ||||| | || || ||||| |||||||| |||||||| || ||||||||
Sbjct: 169 acagcaaagagatgtgaagacacacctccaatgacccaaaactgctcatttctccaccaa 110
Query: 904 tcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatgcagatg 963
|| |||||| | || |||||||| |||||||||||||||| || | | ||||||||
Sbjct: 109 tcatcgatgcctacaccactccatctcatttccaggatgctcgtagcaaaaatgcagata 50
Query: 964 aaaagtgccatg-aaccagatactggccacattggtaagctctgg 1007
||||||| |||| ||||||| ||||| |||||| ||||||||||
Sbjct: 49 aaaagtgacatgaaaccaga-gctggcaacattgttaagctctgg 6
>gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 246 bits (124), Expect = 1e-062
Identities = 347/420 (82%), Gaps = 6/420 (1%)
Strand = Plus / Minus
Query: 544 ggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacc 603
|||||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 490 ggcgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgacc 431
Query: 604 cagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatc 663
|| || |||||||||||||| ||||| || |||||||| |||| |||||||||||||||
Sbjct: 430 cataatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatg 371
Query: 664 gcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggt 723
|||| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || ||
Sbjct: 370 gcgtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcggg 311
Query: 724 atcagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc- 779
|| || || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 310 atgaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccg 251
Query: 780 --ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccc 837
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||
Sbjct: 250 gtggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccc 191
Query: 838 tggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctc 897
|| | || ||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 190 tgcacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgttcctc 131
Query: 898 caccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||||| || |||||| ||| || ||||||| ||| ||||||||||| ||| || |||||
Sbjct: 130 caccactcctcgatgctcaccccgctccaccgcatctccaggatgcccgtcgcgaagatg 71
>gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 574
Score = 242 bits (122), Expect = 2e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| || || || | ||||||||| ||||| ||||
Sbjct: 192 agttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaatgggt 133
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||
Sbjct: 132 cgatgcggacccacaggagcgagaagatggaggccagcaggagggaccagacgatcacga 73
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacga 598
|||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct: 72 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatga 13
Query: 599 tcacccagaa 608
||||||||||
Sbjct: 12 tcacccagaa 3
>gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 686
Score = 240 bits (121), Expect = 8e-061
Identities = 326/393 (82%), Gaps = 6/393 (1%)
Strand = Plus / Minus
Query: 571 cccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaagagcttcccgaac 630
||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 671 cccttgaggaacgggtagaggtggacgatgacccagaatgcgaagaagagcttgccgaag 612
Query: 631 agggggccccacgactcgtacccgttgttgatcgcgttcgagatcccggccaccaccccg 690
|| |||||||| |||| ||||||||||||||| |||| ||||| |||||||| || |||
Sbjct: 611 agcgggccccatgactggtacccgttgttgatggcgtcggagatgccggccacgacgccg 552
Query: 691 atgaagttcagcaggaggagcgtggtcgggggtatcagcagggtggtccacttgaacgtg 750
|||| ||| | | ||| |||||||| || || || || || |||||||||||||| | |
Sbjct: 551 atgatgttgatgatgagcagcgtggtgggcgggatgaggagcgtggtccacttgaatgcg 492
Query: 751 tacagctccgagaactcctcg---tcgtcccc---ggccttcgacgtcacggtgaagctc 804
|| ||||| | |||||| ||| ||||| || |||||| || || ||||||||| |
Sbjct: 491 tagagctcggcgaactcgtcgtcctcgtcgccggtggccttggaggtgacggtgaagttg 432
Query: 805 gtgtcgatgccggcgagcaccttcagcaggccctggaacaccgcgaacagatgcgccgaa 864
|||||||| || || || ||||| ||||||||||| | || ||||| |||||||||||
Sbjct: 431 gtgtcgatccctgccaggaccttgagcaggccctgcacgacggcgaagagatgcgccgac 372
Query: 865 acgcctccgatgacccagaactgctcgttcctccaccagtcgtcgatggccacgccactc 924
||||| |||||||||||||||||||||||||||||||| || |||||| ||| || |||
Sbjct: 371 acgccgccgatgacccagaactgctcgttcctccaccactcctcgatgctcaccccgctc 312
Query: 925 cacctcatttccaggatgccggtcacggagatg 957
|||| ||| ||||||||||| ||| || |||||
Sbjct: 311 caccgcatctccaggatgcccgtcgcgaagatg 279
>gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240b20, DNA
sequence
Length = 503
Score = 240 bits (121), Expect = 8e-061
Identities = 148/157 (94%)
Strand = Plus / Plus
Query: 3427 cgcttgtagcgggtcctgcactgcgggcacgcttgcgagccctcgcggcgctcgtactcg 3486
|||||||| || |||| ||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 3 cgcttgtaccgtgtccggcactgcgggcacgcctgcgacccctcacggcgctcgtactcg 62
Query: 3487 tagcaggcgcggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgtcg 3546
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tagcaggcgcggcacaccgggaaggcgcactcgttgcacgccacgaagggctccccgtcg 122
Query: 3547 aagcccaccccgacctcgtcgccgcatatctggcacg 3583
|||||||||||||||||||| ||||||||||||||||
Sbjct: 123 aagcccaccccgacctcgtccccgcatatctggcacg 159
Score = 117 bits (59), Expect = 8e-024
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 3634 tcgcggcggatcaccaccagctcgttccggttatgcgagccggccaccagccccgcgcta 3693
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 213 tcgcggcggatcaccaccagctcgttccggttgtgcgagccggacaccagccccgcgctc 272
Query: 3694 gcctccatctc 3704
|||||||||||
Sbjct: 273 gcctccatctc 283
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3750 cgcggcggcggcacagcgaaatgcacgtagtcctcc 3785
|||||||||||||||| |||||| | ||||||||||
Sbjct: 313 cgcggcggcggcacagggaaatgtaggtagtcctcc 348
>gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 299
Score = 236 bits (119), Expect = 1e-059
Identities = 176/195 (90%)
Strand = Plus / Minus
Query: 1692 gcaccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatc 1751
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 218 gcaccactttggccagcagttgcaagtccttgatggtggcttctttgttttgggtgcgtc 159
Query: 1752 ataaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttg 1811
||| ||||||| |||||||| ||||| |||||||| ||||| || |||||||| |||||
Sbjct: 158 atagccatataatgcctgcctcctgaagacacatcctgtaccaacgtaaatggggccttg 99
Query: 1812 aataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcg 1871
||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 98 gataccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcg 39
Query: 1872 atcatgacggtcaat 1886
||||||||| |||||
Sbjct: 38 atcatgacgatcaat 24
>gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112l18, DNA
sequence
Length = 427
Score = 232 bits (117), Expect = 2e-058
Identities = 340/413 (82%), Gaps = 6/413 (1%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || |||||||| ||||||||||| | |||||||| || || || || ||
Sbjct: 413 gacccagagcagggagaagatggaggccagcagcacggaccagatgacaacaatggtggg 354
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||| | ||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 353 cgtcctgttctggcgccccatgagccccttgaggaacgggtagaggtggacgatgaccca 294
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
||| |||||||||||||| ||||| || |||||||| |||| ||||||||||||||| ||
Sbjct: 293 gaatgcgaagaagagcttgccgaagagcgggccccatgactggtacccgttgttgatggc 234
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| ||||| |||||||| || ||||||| ||| | | ||| |||||||| || || ||
Sbjct: 233 gtcggagatgccggccacgacgccgatgatgttgatgatgagcagcgtggtgggcgggat 174
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| || |||||||||||||| | ||| ||||| | |||||| ||| ||||| ||
Sbjct: 173 gaggagcgtggtccacttgaatgcgtagagctcggcgaactcgtcgtcctcgtcgccggt 114
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || ||||||||| | |||||||| || || || ||||| |||||||||||
Sbjct: 113 ggccttggaggtgacggtgaagttggtgtcgatccctgccaggaccttgagcaggccctg 54
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgt 892
| || ||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 53 cacgacggcgaagagatgcgccgacacgccgccgatgacccagaactgctcgt 1
>gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 381
Score = 222 bits (112), Expect = 2e-055
Identities = 151/164 (92%)
Strand = Plus / Minus
Query: 419 agttgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggt 478
||||||||||||| |||||||||||||| || || || | ||||||||| ||||||||||
Sbjct: 164 agttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaacgggt 105
Query: 479 cgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacga 538
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 104 cgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacga 45
Query: 539 tcgtcggcgtcctgttctgcctccccaccagacccttgaggaac 582
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 44 tcgtcggcgtccggttctgccgtcccaccagacccttgaggaac 1
>gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 285
Score = 222 bits (112), Expect = 2e-055
Identities = 232/272 (85%)
Strand = Plus / Minus
Query: 1105 gaaaacctttccaggaattttagcccgccgccgtacccgtaccaaagtgggcagtgcttg 1164
||||| |||||||| ||||| || || ||||| ||||| |||||||| ||||| || |||
Sbjct: 280 gaaaatctttccagaaatttcaggccaccgccatacccataccaaagagggcaatgattg 221
Query: 1165 ctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcggaa 1224
|||||||| ||||| | ||||||||| ||||| ||||| |||||||||||||| || |||
Sbjct: 220 ctgaagaagatttcaatagacccaagagcccaacgaagcacctggtgaagacgatctgaa 161
Query: 1225 aggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgc 1284
|| |||||||| |||||||||||||||||| ||| || || ||||||||||| ||||||
Sbjct: 160 agattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattgaccgc 101
Query: 1285 cagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaatc 1344
|| ||||| || ||||| || || ||||| | ||||| ||||| | ||||||||||||
Sbjct: 100 caaccatgacaatgcattttgaaaccagttagaatatcttctgtaactgatccataaatc 41
Query: 1345 cagccaatctcttttccccagtcggtcttgtc 1376
||||||||||||||||||||||| ||||||||
Sbjct: 40 cagccaatctcttttccccagtctgtcttgtc 9
>gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_20_E12_A002 5', mRNA sequence
Length = 436
Score = 220 bits (111), Expect = 8e-055
Identities = 318/387 (82%)
Strand = Plus / Minus
Query: 868 cctccgatgacccagaactgctcgttcctccaccagtcgtcgatggccacgccactccac 927
||||| ||||||||||||||||| ||||||||||| || || || | || ||||||||
Sbjct: 414 cctccaatgacccagaactgctcattcctccaccaatcatcaattccaacaccactccat 355
Query: 928 ctcatttccaggatgccggtcacggagatgcagatgaaaagtgccatgaaccagatactg 987
|||||||| ||||||| || | | ||||| || || |||| ||||||||| | |||
Sbjct: 354 ctcatttctaggatgcttgtagcaaaaatgcaaataaagagtgacatgaaccacaggctg 295
Query: 988 gccacattggtaagctctggtgtgataaacttccccgtgagcaggcagatggcaggcaag 1047
|| ||||| | | |||||| |||||||| |||||||| | | || |||||||||||
Sbjct: 294 gcaacattattcaactctggagtgataaatttccccgtcaataaacaaatggcaggcaat 235
Query: 1048 gtacagtaagccaggagaggaatggacgtccagggataaacgatggagttgatataagaa 1107
||||||||||||| || ||||| || ||||| ||||| || ||||||||||| || |||
Sbjct: 234 gtacagtaagccaaaaggggaatagatgtccaaggatacacaatggagttgatgtaggaa 175
Query: 1108 aacctttccaggaattttagcccgccgccgtacccgtaccaaagtgggcagtgcttgctg 1167
|| |||||||| ||||| || || ||||| ||||| |||||||| ||||| || ||||||
Sbjct: 174 aatctttccagaaatttcaggccaccgccatacccataccaaagagggcaatgattgctg 115
Query: 1168 aagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcggaaagg 1227
||||| ||||| | ||||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 114 aagaagatttcaatagacccaagagcccaacgaagcacctggtgaagacgatctgaaaga 55
Query: 1228 ttcagaggcgcagaacctttgaatgca 1254
|||||||| ||||||||||||||||||
Sbjct: 54 ttcagaggtgcagaacctttgaatgca 28
>gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 412
Score = 212 bits (107), Expect = 2e-052
Identities = 266/319 (83%)
Strand = Plus / Minus
Query: 484 cggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtc 543
|||||||| || ||||||||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 326 cggacccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgtt 267
Query: 544 ggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacc 603
||||| |||||||||||||| ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 266 ggcgttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacc 207
Query: 604 cagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatc 663
|| || || ||||||||||||||||||||||| ||||| || || || || ||||||||
Sbjct: 206 caaaatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgatt 147
Query: 664 gcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggt 723
|| || || | || || || || || ||||| ||||| || || || |||||||| |||
Sbjct: 146 gcattggaaacgccagctactactccaatgaaattcagtagaagcagggtggtcggaggt 87
Query: 724 atcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggcc 783
||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 86 atcagaagggttgtccatttgaatgtgtacagctctgagaactcctcgtcgtctccaccc 27
Query: 784 ttcgacgtcacggtgaagc 802
|| || ||||| |||||||
Sbjct: 26 ttggatgtcacagtgaagc 8
>gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_F11_A002 5', mRNA sequence
Length = 749
Score = 212 bits (107), Expect = 2e-052
Identities = 182/207 (87%)
Strand = Plus / Minus
Query: 3376 tcgacgccgtcctcctcctcgtcgccggccacccgcgggcagcccttgaggcgcttgtag 3435
|||||||||||||||||||| || |||| ||| ||| ||||||||||||||||||||||
Sbjct: 591 tcgacgccgtcctcctcctcatcaccggtcacacgctggcagcccttgaggcgcttgtat 532
Query: 3436 cgggtcctgcactgcgggcacgcttgcgagccctcgcggcgctcgtactcgtagcaggcg 3495
|||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||| |
Sbjct: 531 cgggtcttgcactgggggcagttctgcgtgccctcccggcgctcgtactcgtagcagtcc 472
Query: 3496 cggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgtcgaagcccacc 3555
|||||||||||||||||||||||||||||||||||||||||||||||| || | | |
Sbjct: 471 cggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgccgggggcaagg 412
Query: 3556 ccgacctcgtcgccgcatatctggcac 3582
||||| ||||||||||| |||||||||
Sbjct: 411 ccgacgtcgtcgccgcaaatctggcac 385
Score = 77.8 bits (39), Expect = 7e-012
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 3628 tcgcggtcgcggcggatcaccaccagctcgttccggttatgcgagccggccaccagcccc 3687
|||| |||||||||||| || || |||||||| ||||| || |||||||||||||||||
Sbjct: 345 tcgccgtcgcggcggatgacgacgagctcgttgcggttgtgggagccggccaccagcccg 286
Query: 3688 gcgctagcctccatc 3702
||||| |||||||||
Sbjct: 285 gcgctcgcctccatc 271
>gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 208 bits (105), Expect = 3e-051
Identities = 246/293 (83%)
Strand = Plus / Minus
Query: 484 cggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtc 543
|||||||| || ||||||||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 314 cggacccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgtt 255
Query: 544 ggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacc 603
||||| |||||||||||||| ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 254 ggcgttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacc 195
Query: 604 cagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatc 663
|| || || ||||||||||||||||||||||| ||||| || || || || ||||||||
Sbjct: 194 caaaatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgatt 135
Query: 664 gcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggt 723
|| || || | || || || || || ||||| ||||| || || || |||||||| |||
Sbjct: 134 gcattggaaacgccagctactactccaatgaaattcagtagaagcagggtggtcggaggt 75
Query: 724 atcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtc 776
||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 74 atcagaagggttgtccatttgaatgtgtacagctctgagaactcctcgtcgtc 22
>gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_A05_A002 5', mRNA sequence
Length = 594
Score = 204 bits (103), Expect = 4e-050
Identities = 181/207 (87%)
Strand = Plus / Minus
Query: 3376 tcgacgccgtcctcctcctcgtcgccggccacccgcgggcagcccttgaggcgcttgtag 3435
|||||||||||||||||||| || |||| ||| ||| ||||||||||||||||||||||
Sbjct: 289 tcgacgccgtcctcctcctcatcaccggtcacacgctggcagcccttgaggcgcttgtat 230
Query: 3436 cgggtcctgcactgcgggcacgcttgcgagccctcgcggcgctcgtactcgtagcaggcg 3495
|||||| ||||||| ||||| |||| |||||| ||||| ||||||||||||||| |
Sbjct: 229 cgggtcttgcactgggggcagttctgcgtgccctcccggcgttcgtactcgtagcagtcc 170
Query: 3496 cggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgtcgaagcccacc 3555
|||||||||||||||||||||||||||||||||||||||||||||||| || | | |
Sbjct: 169 cggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgccgggggcaagg 110
Query: 3556 ccgacctcgtcgccgcatatctggcac 3582
||||| ||||||||||| |||||||||
Sbjct: 109 ccgacgtcgtcgccgcaaatctggcac 83
Score = 79.8 bits (40), Expect = 2e-012
Identities = 144/180 (80%), Gaps = 9/180 (5%)
Strand = Plus / Minus
Query: 3061 agatccttggacgggtccatggatctcggttgcactggaaggttgggatctgcgaaaggg 3120
||||||||||| |||||||| || || |||||||| || | | ||||||| || ||||
Sbjct: 589 agatccttggatgggtccatagacctgggttgcacaggtaagctgggatccgcataagga 530
Query: 3121 agcgggtggatcctcttgcccccgccgccgccgccgctcatgtaggacggcacgagcgcg 3180
|| || ||||||||||| ||||| ||||| |||| | || ||||| ||||||
Sbjct: 529 aggggatggatcctctttcccccaccgcc---------catgaaagaaggcaccagcgcg 479
Query: 3181 tgctgctccggcgggatgtcatcaaccatctggccgttggtgaggagcggcacgttgggg 3240
||||||||||| ||||||||||| |||||||| || ||||||||||| || || ||||||
Sbjct: 478 tgctgctccggtgggatgtcatcgaccatctgcccattggtgaggagtggaacattgggg 419
>gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 190 bits (96), Expect = 7e-046
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| | |||||||||||| ||||| || ||||||||||||| | |||||| || ||
Sbjct: 287 gacccagacgagcgagaagatggaggcgaggaggatggaccagagcacgacgatggtggg 228
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 227 cgtccggttctgcctccccatcaggcccttgaggaacgggtacaggtggacgatgaccca 168
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||| |||||||||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 167 gaaggagaagaagagcttgccgaacagcggcccccacgagccgtacccgttgttga 112
>gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 190 bits (96), Expect = 7e-046
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| | |||||||||||| ||||| || ||||||||||||| | |||||| || ||
Sbjct: 302 gacccagacgagcgagaagatggaggcgaggaggatggaccagagcacgacgatggtggg 243
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 242 cgtccggttctgcctccccatcaggcccttgaggaacgggtacaggtggacgatgaccca 183
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||| |||||||||||| |||||||| || |||||||| |||||||||||||||
Sbjct: 182 gaaggagaagaagagcttgccgaacagcggcccccacgagccgtacccgttgttga 127
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,390,537
Number of Sequences: 832831
Number of extensions: 1390537
Number of successful extensions: 452758
Number of sequences better than 0.5: 308
Number of HSP's better than 0.5 without gapping: 305
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 451849
Number of HSP's gapped (non-prelim): 800
length of query: 3914
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3893
effective length of database: 473,870,218
effective search space: 1844776758674
effective search space used: 1844776758674
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)