BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.4
(806 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle ... 672 0.0
gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1... 654 0.0
gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sor... 603 e-170
gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sor... 551 e-155
gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2)... 545 e-153
gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle... 539 e-151
gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sor... 537 e-151
gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle... 537 e-151
gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Me... 535 e-150
gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle... 529 e-148
gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sor... 527 e-148
gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle... 525 e-147
gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sor... 505 e-141
gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Me... 444 e-123
gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sor... 432 e-119
gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorgh... 402 e-110
gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2... 391 e-107
gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adap... 387 e-105
gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle... 363 2e-098
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 313 1e-083
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 313 1e-083
gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorgh... 299 2e-079
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 287 8e-076
gb|BG558112.1|BG558112 RHIZ2_67_A03.g1_A003 Rhizome2 (RHIZ2... 246 3e-063
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 236 3e-060
gb|BG051535.1|BG051535 FM1_57_G01.g1_A003 Floral-Induced Me... 212 4e-053
gb|AI724868.1|AI724868 RHIZ1_30_D02.y3_A001 Rhizome1 (RHIZ1... 180 1e-043
gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum m... 176 2e-042
gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum m... 176 2e-042
gb|CW154736.1|CW154736 104_557_11145760_148_36357_064 Sorgh... 161 1e-037
gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Me... 159 5e-037
gb|CW304527.1|CW304527 104_789_11465829_148_35705_087 Sorgh... 131 1e-028
gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed see... 131 1e-028
gb|CL165781.1|CL165781 104_361_10808896_116_31821_112 Sorgh... 125 7e-027
gb|CW304526.1|CW304526 104_789_11465829_116_35701_087 Sorgh... 125 7e-027
gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Me... 123 3e-026
gb|BI075368.1|BI075368 IP1_19_F12.b1_A002 Immature pannicle... 123 3e-026
gb|CW116495.1|CW116495 104_492_11107149_116_34608_093 Sorgh... 121 1e-025
gb|BZ367054.1|BZ367054 id02b04.g1 WGS-SbicolorF (JM107 adap... 119 4e-025
gb|CL165780.1|CL165780 104_361_10808896_114_31820_112 Sorgh... 119 4e-025
gb|CW092081.1|CW092081 104_454_10998932_114_33037_074 Sorgh... 111 1e-022
gb|CW154735.1|CW154735 104_557_11145760_116_36358_064 Sorgh... 111 1e-022
gb|BF656542.1|BF656542 FM1_51_D01.g1_A003 Floral-Induced Me... 80 4e-013
gb|CW476625.1|CW476625 fsbb001f233j03k0 Sorghum methylation... 62 8e-008
gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1... 62 8e-008
gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1... 62 8e-008
gb|BG465924.1|BG465924 RHIZ2_46_C09.g1_A003 Rhizome2 (RHIZ2... 60 3e-007
gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) So... 56 5e-006
gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves... 56 5e-006
gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/c... 54 2e-005
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 52 8e-005
gb|CW472326.1|CW472326 fsbb001f227d11f0 Sorghum methylation... 48 0.001
gb|CW077452.1|CW077452 104_381_10892527_116_31765_127 Sorgh... 46 0.005
gb|CW077453.1|CW077453 104_381_10892527_148_31764_127 Sorgh... 46 0.005
gb|CW081454.1|CW081454 104_419_10941845_116_32296_023 Sorgh... 46 0.005
gb|CW112744.1|CW112744 104_486_11105051_116_34545_036 Sorgh... 46 0.005
gb|CW112745.1|CW112745 104_486_11105051_148_34541_036 Sorgh... 46 0.005
gb|CW128496.1|CW128496 104_510_11114036_148_34753_078 Sorgh... 46 0.005
gb|CW164626.1|CW164626 104_572_11152084_148_36463_004 Sorgh... 46 0.005
gb|CW190500.1|CW190500 104_612_11174536_148_36759_062 Sorgh... 46 0.005
gb|CW210000.1|CW210000 104_640_11189560_116_37000_060 Sorgh... 46 0.005
gb|CW457729.1|CW457729 fsbb001f203k19f0 Sorghum methylation... 46 0.005
gb|CW457730.1|CW457730 fsbb001f203k19k0 Sorghum methylation... 46 0.005
gb|AW284341.2|AW284341 LG1_275_C12.g1_A002 Light Grown 1 (L... 46 0.005
gb|AW286529.2|AW286529 LG1_334_A07.g1_A002 Light Grown 1 (L... 46 0.005
gb|AW677220.1|AW677220 DG1_6_D11.g1_A002 Dark Grown 1 (DG1)... 46 0.005
gb|AW744827.1|AW744827 LG1_384_D09.g1_A002 Light Grown 1 (L... 46 0.005
gb|AW922651.1|AW922651 DG1_20_B09.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|AW923628.1|AW923628 DG1_56_E12.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE356472.1|BE356472 DG1_125_D03.g1_A002 Dark Grown 1 (DG... 46 0.005
gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE359750.1|BE359750 DG1_56_E12.g2_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 46 0.005
gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Me... 46 0.005
gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) So... 46 0.005
gb|BG557199.1|BG557199 EM1_43_H09.g1_A002 Embryo 1 (EM1) So... 46 0.005
gb|BG557200.1|BG557200 EM1_43_H10.g1_A002 Embryo 1 (EM1) So... 46 0.005
gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-tr... 46 0.005
gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficien... 46 0.005
gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficie... 46 0.005
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 46 0.005
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 46 0.005
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 46 0.005
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 46 0.005
gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassino... 46 0.005
gb|CX620938.1|CX620938 GABR1_55_B01.b1_A002 GA- or brassino... 46 0.005
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 46 0.005
gb|CW172245.1|CW172245 104_583_11156181_148_36534_089 Sorgh... 44 0.020
gb|CW254111.1|CW254111 104_718_11225481_116_35118_045 Sorgh... 44 0.020
gb|AW283021.1|AW283021 LG1_301_G01.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW284398.1|AW284398 LG1_289_B04.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW282563.2|AW282563 LG1_312_A09.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW282564.2|AW282564 LG1_312_A08.g1_A002 Light Grown 1 (L... 44 0.020
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 44 0.020
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 44 0.020
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 44 0.020
gb|BF421234.1|BF421234 FM1_7_B10.g1_A003 Floral-Induced Mer... 44 0.020
gb|BF421580.1|BF421580 FM1_9_F03.g1_A003 Floral-Induced Mer... 44 0.020
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 44 0.020
gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Me... 44 0.020
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 44 0.020
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 44 0.020
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 44 0.020
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 44 0.020
gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Me... 44 0.020
gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Me... 44 0.020
gb|BF587017.1|BF587017 FM1_32_C04.g1_A003 Floral-Induced Me... 44 0.020
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 44 0.020
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 44 0.020
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 44 0.020
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 44 0.020
gb|BG052581.1|BG052581 RHIZ2_25_C09.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG052590.1|BG052590 RHIZ2_25_E04.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2)... 44 0.020
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG103225.1|BG103225 RHIZ2_19_G03.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG103244.1|BG103244 RHIZ2_20_B09.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2... 44 0.020
gb|BI245591.1|BI245591 IP1_67_E07.g1_A002 Immature pannicle... 44 0.020
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 44 0.020
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 44 0.020
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 44 0.020
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 44 0.020
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 44 0.020
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 44 0.020
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 44 0.020
gb|CD432478.1|CD432478 ETH1_30_D10.b1_A002 Ethylene-treated... 44 0.020
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 44 0.020
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 44 0.020
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 44 0.020
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 44 0.020
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 44 0.020
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 44 0.020
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 44 0.020
gb|CN134551.1|CN134551 OX1_27_C03.b1_A002 Oxidatively-stres... 44 0.020
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 44 0.020
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 44 0.020
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 44 0.020
gb|CN141820.1|CN141820 WOUND1_2_C04.b1_A002 Wounded leaves ... 44 0.020
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 44 0.020
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 44 0.020
gb|CN143277.1|CN143277 WOUND1_15_E07.b1_A002 Wounded leaves... 44 0.020
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 44 0.020
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 44 0.020
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 44 0.020
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 44 0.020
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 44 0.020
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 44 0.020
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 44 0.020
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 44 0.020
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 44 0.020
gb|CN145862.1|CN145862 WOUND1_35_F12.g1_A002 Wounded leaves... 44 0.020
gb|CN145942.1|CN145942 WOUND1_36_H04.b1_A002 Wounded leaves... 44 0.020
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 44 0.020
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 44 0.020
gb|CN147899.1|CN147899 WOUND1_53_A07.b1_A002 Wounded leaves... 44 0.020
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 44 0.020
gb|CN148093.1|CN148093 WOUND1_54_D09.b1_A002 Wounded leaves... 44 0.020
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 44 0.020
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 44 0.020
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 44 0.020
gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves... 44 0.020
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 44 0.020
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 44 0.020
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 44 0.020
gb|CN150415.1|CN150415 WOUND1_69_B07.b1_A002 Wounded leaves... 44 0.020
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 44 0.020
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 44 0.020
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 44 0.020
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 44 0.020
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 44 0.020
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 44 0.020
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 44 0.020
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 44 0.020
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 44 0.020
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 44 0.020
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 44 0.020
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 44 0.020
gb|CX618845.1|CX618845 GABR1_42_B07.b1_A002 GA- or brassino... 44 0.020
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 44 0.020
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 44 0.020
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 44 0.020
gb|CX621923.1|CX621923 GABR1_61_A11.b2_A002 GA- or brassino... 44 0.020
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 44 0.020
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 44 0.020
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 44 0.020
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 44 0.020
gb|AW676919.1|AW676919 DG1_2_E11.b1_A002 Dark Grown 1 (DG1)... 42 0.078
gb|CW143523.1|CW143523 104_535_11137466_116_34955_009 Sorgh... 40 0.31
gb|CW143524.1|CW143524 104_535_11137466_148_34959_009 Sorgh... 40 0.31
gb|CW391208.1|CW391208 fsbb001f077d18f0 Sorghum methylation... 40 0.31
gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2... 40 0.31
gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) So... 40 0.31
gb|CF771891.1|CF771891 DSBF1_25_F02.g1_A010 Drought-stresse... 40 0.31
gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassino... 40 0.31
>gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 636
Score = 672 bits (339), Expect = 0.0
Identities = 539/603 (89%), Gaps = 7/603 (1%)
Strand = Plus / Plus
Query: 34 tccagctggcgcccagtagctactctgccgattggcaggttcaatatgtttttgcacgca 93
|||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 tccagcagacgcccagtagctactctgccgattggcaggtccaatatgtttttgcacgca 61
Query: 94 atggcaaaccgattggaccacaggcgaattctaagtggctctacatcgccccgacgggga 153
|||||||||| ||||||||| ||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 62 atggcaaaccaattggaccaaaggcgaattctaattggctttacatcgtcccgacgggga 121
Query: 154 tgtacgggtgcgtgaactacctcaaggagaagtatgggaatccaacgatctacataacgg 213
|||| || || ||||||||||||||||||||||||||||||||||| ||||||| || |
Sbjct: 122 tgtatggatgtgtgaactacctcaaggagaagtatgggaatccaactgtctacattaccg 181
Query: 214 agaacggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacga 273
|||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct: 182 agaatggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaa 241
Query: 274 gggtgcggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcga 333
|||||||||||||||| |||||||| ||||||||||| || |||||||| ||||| || |
Sbjct: 242 gggtgcggttctacagaagctacattggccagctgaaaaaagccatagatcagggcgcaa 301
Query: 334 acgtggctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtact 393
||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 302 acgtggctggctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatact 361
Query: 394 cgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgt 453
|||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||
Sbjct: 362 cgtccaagtttggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcgt 421
Query: 454 cggcctactggttcagggacatgcttcagaagcattgagatctccagag---ccgagcct 510
|||||||||||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 422 cggcctactggttcagggacatgcttcagaagcattgagatctctagggccaccgagcct 481
Query: 511 gagcacggaaggtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttc 570
|| | | | |||| |||||||||||||| |||| |||||| |||| ||||||||||||
Sbjct: 482 ga--aggta--gtactattttgttcagctttgcctcgtgttttggattgcccaatggttc 537
Query: 571 aaatccggctcagtgcctggctaccaaaatgggaacaaaggacagctaccccgatcaatt 630
|||||| || |||| |||||| |||||||||| ||| || ||| || ||||| ||||
Sbjct: 538 aaatccagccttgtgcttggctagcaaaatgggagtaaaagagagccactccgatgaatt 597
Query: 631 gtg 633
|||
Sbjct: 598 gtg 600
>gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 654 bits (330), Expect = 0.0
Identities = 531/594 (89%), Gaps = 8/594 (1%)
Strand = Plus / Plus
Query: 43 cgcccagtagctactctgccgattggcaggttcaatatgtttttgcacgcaatggcaaac 102
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 2 cgcccagtagctactctgccgattggcaggtccaatatgtttt-gcacgcaatggcaaac 60
Query: 103 cgattggaccacaggcgaattctaagtggctctacatcgccccgacggggatgtacgggt 162
| ||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| || |
Sbjct: 61 caattggaccaaaggcgaattctaattggctttacatcgtcccgacggggatgtatggat 120
Query: 163 gcgtgaactacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaa 222
| ||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||
Sbjct: 121 gtgtgaactacctcaaggagaagtatgggaatccaactgtctacattaccgagaatggaa 180
Query: 223 tggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggt 282
|||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 181 tggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtgcggt 240
Query: 283 tctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctg 342
||||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||||||
Sbjct: 241 tctacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtggctg 300
Query: 343 gctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagt 402
|||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 301 gctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtccaagt 360
Query: 403 tcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctact 462
| |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 361 ttggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcctact 420
Query: 463 ggttcagggacatgcttcagaagcattgagatctccagag---ccgagcctgagcacgga 519
||||||||||||||||||||||||||||||||||| || | |||||||||| | | |
Sbjct: 421 ggttcagggacatgcttcagaagcattgagatctctagggccaccgagcctga--aggta 478
Query: 520 aggtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggc 579
|||| |||||||||||||| |||| |||||| |||| |||||||||||||||||| ||
Sbjct: 479 --gtactattttgttcagctttgcctcgtgttttggattgcccaatggttcaaatccagc 536
Query: 580 tcagtgcctggctaccaaaatgggaacaaaggacagctaccccgatcaattgtg 633
|||| |||||| |||||||||| ||| || ||| || ||||| |||||||
Sbjct: 537 cttgtgcttggctagcaaaatgggagtaaaagagagccactccgatgaattgtg 590
>gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 603 bits (304), Expect = e-170
Identities = 418/456 (91%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 107 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 166
Query: 61 ccgattggcaggttcaatatgtttttgcacgcaatggcaaaccgattggaccacaggcga 120
||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 167 ccgattggcaggtccaatatgtttttgcacgcaatggcaaaccaattggaccaaaggcga 226
Query: 121 attctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaagg 180
||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||||||||
Sbjct: 227 attctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaagg 286
Query: 181 agaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaact 240
||||||||||||||||||| ||||||| || ||||| |||||||| |||||||||||||
Sbjct: 287 agaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctggaaact 346
Query: 241 tgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcg 300
||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |
Sbjct: 347 tgacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacattg 406
Query: 301 gccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctc 360
|||||||||| || |||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 407 gccagctgaaaaaagccatagatcagggcgcaaacgtggctggctacttcgcctggtctc 466
Query: 361 tcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtgg 420
|||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |
Sbjct: 467 tccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgttg 526
Query: 421 acttcaacacgctcgaacgccacccgaaggcgtcgg 456
||||||| ||||||||||| ||||| ||||||||||
Sbjct: 527 acttcaatacgctcgaacggcaccccaaggcgtcgg 562
>gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 551 bits (278), Expect = e-155
Identities = 463/522 (88%), Gaps = 7/522 (1%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 1 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 60
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctg 234
||||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||
Sbjct: 61 tcaaggagaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctg 120
Query: 235 gaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagct 294
||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 121 gaaacttgacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagct 180
Query: 295 acatcggccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcct 354
|||| ||||||||||| || |||||||| ||||| || ||||||||||||||||||||||
Sbjct: 181 acattggccagctgaaaaaagccatagatcagggcgcaaacgtggctggctacttcgcct 240
Query: 355 ggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtct 414
|||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 241 ggtctctccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatcgtct 300
Query: 415 acgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggaca 474
|||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 301 acgttgacttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggaca 360
Query: 475 tgcttcagaagcattgagatctccagag---ccgagcctgagcacggaaggtaccatttt 531
||||||||||||||||||||||| || | |||||||||| | | | |||| |||||
Sbjct: 361 tgcttcagaagcattgagatctctagggccaccgagcctga--aggta--gtactatttt 416
Query: 532 gttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcctggc 591
||||||||| |||| |||||| |||| |||||||||||||||||| || |||| ||||
Sbjct: 417 gttcagctttgcctcgtgttttggattgcccaatggttcaaatccagccttgtgcttggc 476
Query: 592 taccaaaatgggaacaaaggacagctaccccgatcaattgtg 633
|| |||||||||| ||| || ||| || ||||| |||||||
Sbjct: 477 tagcaaaatgggagtaaaagagagccactccgatgaattgtg 518
>gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 479
Score = 545 bits (275), Expect = e-153
Identities = 427/475 (89%), Gaps = 7/475 (1%)
Strand = Plus / Plus
Query: 105 attggaccacaggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgc 164
||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| || ||
Sbjct: 5 attggaccaaaggcgaattctaattggctttacatcgtcccgacggggatgtatggatgt 64
Query: 165 gtgaactacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatg 224
||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||
Sbjct: 65 gtgaactacctcaaggagaagtatgggaatccaactgtctacattaccgagaatggaatg 124
Query: 225 gaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttc 284
|| |||||||||||||||||||| || |||||||||||||| ||||| ||||||||||||
Sbjct: 125 gatcagcctggaaacttgacccgtgatcagtacctgcgcgatgccacaagggtgcggttc 184
Query: 285 tacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggc 344
||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||||||||
Sbjct: 185 tacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtggctggc 244
Query: 345 tacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttc 404
|||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct: 245 tacttcgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtccaagttt 304
Query: 405 ggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctactgg 464
|||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 305 ggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcctactgg 364
Query: 465 ttcagggacatgcttcagaagcattgagatctccag---agccgagcctgagcacggaag 521
||||||||||||||||||||||||||||||||| || ||||||||||| | | |
Sbjct: 365 ttcagggacatgcttcagaagcattgagatctctagggccgccgagcctga--aggta-- 420
Query: 522 gtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatcc 576
|||| |||||||||||||| |||| |||||| |||| ||||||||||||||||||
Sbjct: 421 gtactattttgttcagctttgcctcgtgttttggattgcccaatggttcaaatcc 475
>gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 553
Score = 539 bits (272), Expect = e-151
Identities = 436/488 (89%), Gaps = 7/488 (1%)
Strand = Plus / Plus
Query: 120 aattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaag 179
|||||||| ||||| ||||||| ||||||||||||||| || || |||||||||||||||
Sbjct: 1 aattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaag 60
Query: 180 gagaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaac 239
|||||||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||
Sbjct: 61 gagaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctggaaac 120
Query: 240 ttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatc 299
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 121 ttgacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacatt 180
Query: 300 ggccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtct 359
||||||||||| || |||||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 181 ggccagctgaaaaaagccatagatcagggcgcaaacgtggctggctacttcgcctggtct 240
Query: 360 ctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtg 419
||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 241 ctccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgtt 300
Query: 420 gacttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgctt 479
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 gacttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgctt 360
Query: 480 cagaagcattgagatctccagag---ccgagcctgagcacggaaggtaccattttgttca 536
|||||||||||||||||| || | |||||||||| | | | |||| ||||||||||
Sbjct: 361 cagaagcattgagatctctagggccaccgagcctga--aggta--gtactattttgttca 416
Query: 537 gcttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcctggctacca 596
|||| |||| |||||| |||| |||||||||||||||||| || |||| |||||| ||
Sbjct: 417 gctttgcctcgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagca 476
Query: 597 aaatggga 604
||||||||
Sbjct: 477 aaatggga 484
>gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 537 bits (271), Expect = e-151
Identities = 456/515 (88%), Gaps = 7/515 (1%)
Strand = Plus / Plus
Query: 122 ttctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaagga 181
|||||| ||||| ||||||| ||||||||||||||| || || |||||||||||||||||
Sbjct: 1 ttctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaagga 60
Query: 182 gaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaactt 241
|||||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||
Sbjct: 61 gaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctggaaactt 120
Query: 242 gacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcgg 301
|||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||
Sbjct: 121 gacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacattgg 180
Query: 302 ccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctct 361
||||||||| || |||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 181 ccagctgaaaaaagccatagatcagggcgcaaacgtggctggctacttcgcctggtctct 240
Query: 362 cctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtgga 421
||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||
Sbjct: 241 ccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgttga 300
Query: 422 cttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgcttca 481
|||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgcttca 360
Query: 482 gaagcattgagatctccagag---ccgagcctgagcacggaaggtaccattttgttcagc 538
|||||||||||||||| || | |||||||||| | | | |||| ||||||||||||
Sbjct: 361 gaagcattgagatctctagggccaccgagcctga--aggta--gtactattttgttcagc 416
Query: 539 ttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcctggctaccaaa 598
|| |||| |||||| |||| |||||||||||||||||| || |||| |||||| ||||
Sbjct: 417 tttgcctcgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagcaaa 476
Query: 599 atgggaacaaaggacagctaccccgatcaattgtg 633
|||||| ||| || ||| || ||||| |||||||
Sbjct: 477 atgggagtaaaagagagccactccgatgaattgtg 511
Score = 105 bits (53), Expect = 6e-021
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 532 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 591
Query: 694 tggttgatcgtgtttgaaatgctta 718
|| |||||| | |||||||||||||
Sbjct: 592 tgattgatcttatttgaaatgctta 616
>gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 592
Score = 537 bits (271), Expect = e-151
Identities = 456/515 (88%), Gaps = 7/515 (1%)
Strand = Plus / Plus
Query: 122 ttctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaagga 181
|||||| ||||| ||||||| ||||||||||||||| || || |||||||||||||||||
Sbjct: 1 ttctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaagga 60
Query: 182 gaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaactt 241
|||||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||
Sbjct: 61 gaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctggaaactt 120
Query: 242 gacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcgg 301
|||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||
Sbjct: 121 gacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacattgg 180
Query: 302 ccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctct 361
||||||||| || |||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 181 ccagctgaaaaaagccatagatcagggcgcaaacgtggctggctacttcgcctggtctct 240
Query: 362 cctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtgga 421
||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||
Sbjct: 241 ccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgttga 300
Query: 422 cttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgcttca 481
|||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgcttca 360
Query: 482 gaagcattgagatctccagag---ccgagcctgagcacggaaggtaccattttgttcagc 538
|||||||||||||||| || | |||||||||| | | | |||| ||||||||||||
Sbjct: 361 gaagcattgagatctctagggccaccgagcctga--aggta--gtactattttgttcagc 416
Query: 539 ttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcctggctaccaaa 598
|| |||| |||||| |||| |||||||||||||||||| || |||| |||||| ||||
Sbjct: 417 tttgcctcgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagcaaa 476
Query: 599 atgggaacaaaggacagctaccccgatcaattgtg 633
|||||| ||| || ||| || ||||| |||||||
Sbjct: 477 atgggagtaaaagagagccactccgatgaattgtg 511
Score = 79.8 bits (40), Expect = 4e-013
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 532 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 591
>gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 500
Score = 535 bits (270), Expect = e-150
Identities = 422/470 (89%), Gaps = 7/470 (1%)
Strand = Plus / Plus
Query: 110 accacaggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaa 169
|||| ||||||||||||| ||||| ||||||| ||||||||||||||| || || |||||
Sbjct: 1 accaaaggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaa 60
Query: 170 ctacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatggacca 229
|||||||||||||||||||||||||||||| ||||||| || ||||| |||||||| ||
Sbjct: 61 ctacctcaaggagaagtatgggaatccaactgtctacattaccgagaatggaatggatca 120
Query: 230 gcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacag 289
|||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 121 gcctggaaacttgacccgtgatcagtacctgcgcgatgccacaagggtgcggttctacag 180
Query: 290 gagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggctactt 349
|||||||| ||||||||||| || |||||||| ||||| || |||||||||||||||||
Sbjct: 181 aagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtggctggctactt 240
Query: 350 cgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcat 409
||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||
Sbjct: 241 cgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcat 300
Query: 410 cgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcag 469
||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 301 cgtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcag 360
Query: 470 ggacatgcttcagaagcattgagatctccag---agccgagcctgagcacggaaggtacc 526
|||||||||||||||||||||||||||| || ||||||||||| | | | ||||
Sbjct: 361 ggacatgcttcagaagcattgagatctctagggccgccgagcctga--aggta--gtact 416
Query: 527 attttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatcc 576
|||||||||||||| |||| |||||| |||| ||||||||||||||||||
Sbjct: 417 attttgttcagctttgcctcgtgttttggattgcccaatggttcaaatcc 466
>gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 529 bits (267), Expect = e-148
Identities = 428/479 (89%), Gaps = 7/479 (1%)
Strand = Plus / Plus
Query: 129 tggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaaggagaagtat 188
||||| ||||||| ||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 2 tggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaaggagaagtat 61
Query: 189 gggaatccaacgatctacataacggagaacggaatggaccagcctggaaacttgacccga 248
||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||||||
Sbjct: 62 gggaatccaactgtctacattaccgagaatggaatggatcagcctggaaacttgacccgt 121
Query: 249 gaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcggccagctg 308
||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 122 gaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacattggccagctg 181
Query: 309 aagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctctcctcgac 368
|| || |||||||| ||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 182 aaaaaagccatagatcagggcgcaaacgtggctggctacttcgcctggtctctccttgac 241
Query: 369 aacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtggacttcaac 428
||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 242 aacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaat 301
Query: 429 acgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgcttcagaagcat 488
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgcttcagaagcat 361
Query: 489 tgagatctccagag---ccgagcctgagcacggaaggtaccattttgttcagcttcgcct 545
||||||||| || | |||||||||| | | | |||| |||||||||||||| ||||
Sbjct: 362 tgagatctctagggccaccgagcctga--aggta--gtactattttgttcagctttgcct 417
Query: 546 agtgtttgggatggcccaatggttcaaatccggctcagtgcctggctaccaaaatggga 604
|||||| |||| |||||||||||||||||| || |||| |||||| ||||||||||
Sbjct: 418 cgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagcaaaatggga 476
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgag 673
|||||||| ||||||| ||||||||||| ||| |||||||
Sbjct: 529 atgttgtgagtttgtgagtatgttctctgtggcgtttgag 568
>gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 527 bits (266), Expect = e-148
Identities = 445/502 (88%), Gaps = 7/502 (1%)
Strand = Plus / Plus
Query: 135 tacatcgccccgacggggatgtacgggtgcgtgaactacctcaaggagaagtatgggaat 194
||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 4 tacatcgtcccgacggggatgtatggatgtgtgaactacctcaaggagaagtatgggaat 63
Query: 195 ccaacgatctacataacggagaacggaatggaccagcctggaaacttgacccgagaccag 254
||||| ||||||| || ||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 64 ccaactgtctacattaccgagaatggaatggatcagcctggaaacttgacccgtgaccag 123
Query: 255 tacctgcgcgacgccacgagggtgcggttctacaggagctacatcggccagctgaagaag 314
||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 124 tacctgcgcgatgccacaagggtgcggttctacagaagctacattggccagctgaaaaaa 183
Query: 315 gccatagaccagggagcgaacgtggctggctacttcgcctggtctctcctcgacaacttc 374
|||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 184 gccatagatcagggcgcaaacgtggctggctacttcgcctggtctctccttgacaacttc 243
Query: 375 gagtggctggcagggtactcgtccaagttcggcatcgtctacgtggacttcaacacgctc 434
||||||||| |||| |||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 244 gagtggctgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaatacgctc 303
Query: 435 gaacgccacccgaaggcgtcggcctactggttcagggacatgcttcagaagcattgagat 494
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaacggcaccccaaggcgtcggcctactggttcagggacatgcttcagaagcattgagat 363
Query: 495 ctccagag---ccgagcctgagcacggaaggtaccattttgttcagcttcgcctagtgtt 551
||| || | |||||||||| | | | |||| |||||||||||||| |||| |||||
Sbjct: 364 ctctagggccaccgagcctga--aggta--gtactattttgttcagctttgcctcgtgtt 419
Query: 552 tgggatggcccaatggttcaaatccggctcagtgcctggctaccaaaatgggaacaaagg 611
| |||| |||||||||||||||||| || |||| |||||| |||||||||| ||| |
Sbjct: 420 ttggattgcccaatggttcaaatccagccttgtgcttggctagcaaaatgggagtaaaag 479
Query: 612 acagctaccccgatcaattgtg 633
| ||| || ||||| |||||||
Sbjct: 480 agagccactccgatgaattgtg 501
>gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 525 bits (265), Expect = e-147
Identities = 423/473 (89%), Gaps = 7/473 (1%)
Strand = Plus / Plus
Query: 135 tacatcgccccgacggggatgtacgggtgcgtgaactacctcaaggagaagtatgggaat 194
||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 2 tacatcgtcccgacggggatgtatggatgtgtgaactacctcaaggagaagtatgggaat 61
Query: 195 ccaacgatctacataacggagaacggaatggaccagcctggaaacttgacccgagaccag 254
||||| ||||||| || ||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 62 ccaactgtctacattaccgagaatggaatggatcagcctggaaacttgacccgtgaccag 121
Query: 255 tacctgcgcgacgccacgagggtgcggttctacaggagctacatcggccagctgaagaag 314
||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 122 tacctgcgcgatgccacaagggtgcggttctacagaagctacattggccagctgaaaaaa 181
Query: 315 gccatagaccagggagcgaacgtggctggctacttcgcctggtctctcctcgacaacttc 374
|||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 gccatagatcagggcgcaaacgtggctggctacttcgcctggtctctccttgacaacttc 241
Query: 375 gagtggctggcagggtactcgtccaagttcggcatcgtctacgtggacttcaacacgctc 434
||||||||| |||| |||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 242 gagtggctgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaatacgctc 301
Query: 435 gaacgccacccgaaggcgtcggcctactggttcagggacatgcttcagaagcattgagat 494
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaacggcaccccaaggcgtcggcctactggttcagggacatgcttcagaagcattgagat 361
Query: 495 ctccagag---ccgagcctgagcacggaaggtaccattttgttcagcttcgcctagtgtt 551
||| || | |||||||||| | | | |||| |||||||||||||| |||| |||||
Sbjct: 362 ctctagggccaccgagcctga--aggta--gtactattttgttcagctttgcctcgtgtt 417
Query: 552 tgggatggcccaatggttcaaatccggctcagtgcctggctaccaaaatggga 604
| |||| |||||||||||||||||| || |||| |||||| ||||||||||
Sbjct: 418 ttggattgcccaatggttcaaatccagccttgtgcttggctagcaaaatggga 470
>gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 505 bits (255), Expect = e-141
Identities = 351/383 (91%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 107 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 166
Query: 61 ccgattggcaggttcaatatgtttttgcacgcaatggcaaaccgattggaccacaggcga 120
||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 167 ccgattggcaggtccaatatgtttttgcacgcaatggcaaaccaattggaccaaaggcga 226
Query: 121 attctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaagg 180
||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||||||||
Sbjct: 227 attctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacctcaagg 286
Query: 181 agaagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaact 240
||||||||||||||||||| ||||||| || ||||| |||||||| |||||||||||||
Sbjct: 287 agaagtatgggaatccaactgtctacattaccgagaatggaatggatcagcctggaaact 346
Query: 241 tgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcg 300
||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||| |
Sbjct: 347 tgacccgtgaccagtacctgcgcgatgccacaagggtgcggttctacagaagctacattg 406
Query: 301 gccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctc 360
|||||||||| || |||||||| || || || ||||||||||||||||||||||||||||
Sbjct: 407 gccagctgaaaaaagccatagatcatggcgcaaacgtggctggctacttcgcctggtctc 466
Query: 361 tcctcgacaacttcgagtggctg 383
|||| ||||||||||||||||||
Sbjct: 467 tccttgacaacttcgagtggctg 489
>gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 442
Score = 444 bits (224), Expect = e-123
Identities = 376/424 (88%), Gaps = 7/424 (1%)
Strand = Plus / Plus
Query: 213 gagaacggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacg 272
||||| |||||||| |||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 3 gagaatggaatggatcagcctggaaacttgacccgtgatcagtacctgcgcgatgccaca 62
Query: 273 agggtgcggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcg 332
||||||||||||||||| |||||||| ||||||||||| || |||||||| ||||| ||
Sbjct: 63 agggtgcggttctacagaagctacattggccagctgaaaaaagccatagatcagggcgca 122
Query: 333 aacgtggctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtac 392
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||
Sbjct: 123 aacgtggctggctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatac 182
Query: 393 tcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcg 452
||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 183 tcgtccaagtttggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcg 242
Query: 453 tcggcctactggttcagggacatgcttcagaagcattgagatctccag---agccgagcc 509
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 243 tcggcctactggttcagggacatgcttcagaagcattgagatctctagggccgccgagcc 302
Query: 510 tgagcacggaaggtaccattttgttcagcttcgcctagtgtttgggatggcccaatggtt 569
||| | | | |||| |||||||||||||| |||| |||||| |||| |||||||||||
Sbjct: 303 tga--aggta--gtactattttgttcagctttgcctcgtgttttggattgcccaatggtt 358
Query: 570 caaatccggctcagtgcctggctaccaaaatgggaacaaaggacagctaccccgatcaat 629
||||||| || |||| |||||| ||||||||||| ||| || ||| || |||||||||
Sbjct: 359 caaatccagccttgtgcttggctagcaaaatgggaataaaagagagccactccgatcaat 418
Query: 630 tgtg 633
||||
Sbjct: 419 tgtg 422
>gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 345
Score = 432 bits (218), Expect = e-119
Identities = 302/330 (91%)
Strand = Plus / Plus
Query: 165 gtgaactacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatg 224
||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||
Sbjct: 11 gtgaactacctcaaggagaagtatgggaatccaactgtctacattaccgagaatggaatg 70
Query: 225 gaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttc 284
|| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 71 gatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtgcggttc 130
Query: 285 tacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggc 344
||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||||||||
Sbjct: 131 tacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtggctggc 190
Query: 345 tacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttc 404
||||||| |||||||||||| |||||||||||||| ||| |||| ||||||||||||||
Sbjct: 191 tacttcgtctggtctctccttgacaacttcgagtgcctgtcaggatactcgtccaagttt 250
Query: 405 ggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctactgg 464
||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 251 ggcatagtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcgtactgg 310
Query: 465 ttcagggacatgcttcagaagcattgagat 494
||||||||||||||||||||||||||||||
Sbjct: 311 ttcagggacatgcttcagaagcattgagat 340
>gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218762, DNA
sequence
Length = 644
Score = 402 bits (203), Expect = e-110
Identities = 260/279 (93%)
Strand = Plus / Minus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 325 ggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtg 266
Query: 279 cggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtg 338
||||||||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||
Sbjct: 265 cggttctacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtg 206
Query: 339 gctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtcc 398
|||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 205 gctggctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtcc 146
Query: 399 aagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcc 458
||||| |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 145 aagtttggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcc 86
Query: 459 tactggttcagggacatgcttcagaagcattgagatctc 497
|||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tactggttcagggacatgcttcagaagcattgagatctc 47
Score = 125 bits (63), Expect = 7e-027
Identities = 93/103 (90%)
Strand = Plus / Minus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 525 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 466
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 465 tcaaggagaagtatgggaatccaactgtctacattaccgagaa 423
>gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 427
Score = 391 bits (197), Expect = e-107
Identities = 269/293 (91%)
Strand = Plus / Plus
Query: 204 tacataacggagaacggaatggaccagcctggaaacttgacccgagaccagtacctgcgc 263
||||| || ||||| |||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 9 tacattaccgagaatggaatggatcagcctggaaacttgacccgtgatcagtacctgcgt 68
Query: 264 gacgccacgagggtgcggttctacaggagctacatcggccagctgaagaaggccatagac 323
|| ||||| ||||||||||||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 69 gatgccacaagggtgcggttctacagaagctacattggccagctgaaaaaagccatagat 128
Query: 324 cagggagcgaacgtggctggctacttcgcctggtctctcctcgacaacttcgagtggctg 383
||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 129 cagggcgcaaacgtggctggctacttcgcctggtctctccttgacaacttcgagtggctg 188
Query: 384 gcagggtactcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgccac 443
|||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| |||
Sbjct: 189 tcaggatactcgtccaagtttggcatcgtctacgttgacttcaatacgctcgaacggcac 248
Query: 444 ccgaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatct 496
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cccaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatct 301
Score = 79.8 bits (40), Expect = 4e-013
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 522 gtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggctc 581
|||| |||||||||||||| |||| |||||| |||| |||||||||||||||||| ||
Sbjct: 326 gtactattttgttcagctttgcctcgtgttttggattgcccaatggttcaaatccagcct 385
Query: 582 agtgcctggctaccaaaatgggaa 605
|||| |||||| |||||||||||
Sbjct: 386 tgtgcttggctagcaaaatgggaa 409
>gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02b04 5', DNA sequence
Length = 619
Score = 387 bits (195), Expect = e-105
Identities = 259/279 (92%), Gaps = 1/279 (0%)
Strand = Plus / Minus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 278 ggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtg 219
Query: 279 cggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtg 338
||||||||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||
Sbjct: 218 cggttctacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtg 159
Query: 339 gctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtcc 398
|||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 158 gctggctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtcc 99
Query: 399 aagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcc 458
||||| |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 98 aagtttggcatcgtctacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcc 39
Query: 459 tactggttcagggacatgcttcagaagcattgagatctc 497
||||||||||||||||| |||||||||||||||||||||
Sbjct: 38 tactggttcagggacat-cttcagaagcattgagatctc 1
Score = 125 bits (63), Expect = 7e-027
Identities = 93/103 (90%)
Strand = Plus / Minus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 478 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 419
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 418 tcaaggagaagtatgggaatccaactgtctacattaccgagaa 376
>gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 510
Score = 363 bits (183), Expect = 2e-098
Identities = 329/375 (87%), Gaps = 7/375 (1%)
Strand = Plus / Plus
Query: 262 gcgacgccacgagggtgcggttctacaggagctacatcggccagctgaagaaggccatag 321
|||| ||||| ||||||||||||||||| |||||||| ||||||||||| || |||||||
Sbjct: 1 gcgatgccacaagggtgcggttctacagaagctacattggccagctgaaaaaagccatag 60
Query: 322 accagggagcgaacgtggctggctacttcgcctggtctctcctcgacaacttcgagtggc 381
| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 atcagggcgcaaacgtggctggctacttcgcctggtctctccttgacaacttcgagtggc 120
Query: 382 tggcagggtactcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgcc 441
|| |||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| |
Sbjct: 121 tgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaatacgctcgaacggc 180
Query: 442 acccgaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctccaga 501
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 accccaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctctagg 240
Query: 502 g---ccgagcctgagcacggaaggtaccattttgttcagcttcgcctagtgtttgggatg 558
| |||||||||| | | | |||| |||||||||||||| |||| |||||| ||||
Sbjct: 241 gccaccgagcctga--aggta--gtactattttgttcagctttgcctcgtgttttggatt 296
Query: 559 gcccaatggttcaaatccggctcagtgcctggctaccaaaatgggaacaaaggacagcta 618
|||||||||||||||||| || |||| |||||| |||||||||| ||| || ||| |
Sbjct: 297 gcccaatggttcaaatccagccttgtgcttggctagcaaaatgggagtaaaagagagcca 356
Query: 619 ccccgatcaattgtg 633
| ||||| |||||||
Sbjct: 357 ctccgatgaattgtg 371
Score = 111 bits (56), Expect = 1e-022
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 392 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 451
Query: 694 tggttgatcgtgtttgaaatgcttaattcaggactgtgacatctcgag 741
|| |||||| | |||||||||||| | |||||| |||||||||||||
Sbjct: 452 tgattgatcttatttgaaatgctt-agtcaggaacgtgacatctcgag 498
>gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 313 bits (158), Expect = 1e-083
Identities = 370/441 (83%), Gaps = 6/441 (1%)
Strand = Plus / Plus
Query: 50 tagctactctgccgattggcaggttcaatatgtttttgcacgcaatggcaaaccgattgg 109
||||||||| || ||||||||||||||||||| ||| | ||| ||||||||||| |||||
Sbjct: 41 tagctactcagctgattggcaggttcaatatgctttagaacggaatggcaaaccaattgg 100
Query: 110 accacaggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaa 169
||||||||||||||| || ||||| ||||||| ||| |||||||||| || || |||||
Sbjct: 101 accacaggcgaattcaaactggctttacatcgtcccatcggggatgtatggttgtgtgaa 160
Query: 170 ctacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatggacca 229
||| || ||| |||||||||| |||||||| | | |||||| |||||||||||||| ||
Sbjct: 161 ctatctgaagcagaagtatggaaatccaacagttttcataactgagaacggaatggatca 220
Query: 230 gcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacag 289
||||||||||||||||| || |||||| ||| |||| |||| ||||||| |||||||
Sbjct: 221 acctggaaacttgacccgtgagcagtacttgcacgacaccacaagggtgcaattctacaa 280
Query: 290 gagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggctactt 349
||||| ||| |||||||||| ||||| || | || || |||||||||||||||||
Sbjct: 281 aggctacctcgctgagctgaagaaagccatcgatgacggcgctaacgtggctggctactt 340
Query: 350 cgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcat 409
||| ||||||||||| |||||||||||||||| | |||| ||| ||||||||||||| ||
Sbjct: 341 cgcttggtctctccttgacaacttcgagtggcagtcaggttacacgtccaagttcggaat 400
Query: 410 cgtctacgtggacttcaacac------gctcgaacgccacccgaaggcgtcggcctactg 463
|||||||| ||||||| ||| ||||||||| ||||| |||| || ||||||||
Sbjct: 401 tgtctacgtcgacttcagcacgcccaagctcgaacgacaccccaaggattcagcctactg 460
Query: 464 gttcagggacatgcttcagaa 484
|||||| ||||||||||||||
Sbjct: 461 gttcagagacatgcttcagaa 481
>gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 313 bits (158), Expect = 1e-083
Identities = 370/441 (83%), Gaps = 6/441 (1%)
Strand = Plus / Plus
Query: 50 tagctactctgccgattggcaggttcaatatgtttttgcacgcaatggcaaaccgattgg 109
||||||||| || ||||||||||||||||||| ||| | ||| ||||||||||| |||||
Sbjct: 77 tagctactcagctgattggcaggttcaatatgctttagaacggaatggcaaaccaattgg 136
Query: 110 accacaggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaa 169
||||||||||||||| || ||||| ||||||| ||| |||||||||| || || |||||
Sbjct: 137 accacaggcgaattcaaactggctttacatcgtcccatcggggatgtatggttgtgtgaa 196
Query: 170 ctacctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatggacca 229
||| || ||| |||||||||| |||||||| | | |||||| |||||||||||||| ||
Sbjct: 197 ctatctgaagcagaagtatggaaatccaacagttttcataactgagaacggaatggatca 256
Query: 230 gcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacag 289
||||||||||||||||| || |||||| ||| |||| |||| ||||||| |||||||
Sbjct: 257 acctggaaacttgacccgtgagcagtacttgcacgacaccacaagggtgcaattctacaa 316
Query: 290 gagctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggctactt 349
||||| ||| |||||||||| ||||| || | || || |||||||||||||||||
Sbjct: 317 aggctacctcgctgagctgaagaaagccatcgatgacggcgctaacgtggctggctactt 376
Query: 350 cgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcat 409
||| ||||||||||| |||||||||||||||| | |||| ||| ||||||||||||| ||
Sbjct: 377 cgcttggtctctccttgacaacttcgagtggcagtcaggttacacgtccaagttcggaat 436
Query: 410 cgtctacgtggacttcaacac------gctcgaacgccacccgaaggcgtcggcctactg 463
|||||||| ||||||| ||| ||||||||| ||||| |||| || ||||||||
Sbjct: 437 tgtctacgtcgacttcagcacgcccaagctcgaacgacaccccaaggattcagcctactg 496
Query: 464 gttcagggacatgcttcagaa 484
|||||| ||||||||||||||
Sbjct: 497 gttcagagacatgcttcagaa 517
>gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998932, DNA
sequence
Length = 670
Score = 299 bits (151), Expect = 2e-079
Identities = 214/235 (91%)
Strand = Plus / Plus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 436 ggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtg 495
Query: 279 cggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtg 338
||||||||||| |||||||| ||||||||||| || |||||||| ||||| || ||||||
Sbjct: 496 cggttctacagaagctacattggccagctgaaaaaagccatagatcagggcgcaaacgtg 555
Query: 339 gctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtcc 398
|||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||
Sbjct: 556 gctggctacttcgcctggtctctccttgacaacttcgagtggctgtcaggatactcgtcc 615
Query: 399 aagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcgt 453
||||| |||||||||||||| ||||| | ||||||||||| ||||| |||||||
Sbjct: 616 aagtttggcatcgtctacgttgactttcatacgctcgaacggcaccccaaggcgt 670
Score = 125 bits (63), Expect = 7e-027
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 236 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 295
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 296 tcaaggagaagtatgggaatccaactgtctacattaccgagaa 338
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 70 ttgcacgcaatggcaaaccaattggacca 98
>gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_B01_A002 3', mRNA sequence
Length = 609
Score = 287 bits (145), Expect = 8e-076
Identities = 357/428 (83%), Gaps = 6/428 (1%)
Strand = Plus / Plus
Query: 63 gattggcaggttcaatatgtttttgcacgcaatggcaaaccgattggaccacaggcgaat 122
||||||||||||||||||| ||| | ||| ||||||||||| ||||||||||||||||||
Sbjct: 2 gattggcaggttcaatatgctttagaacggaatggcaaaccaattggaccacaggcgaat 61
Query: 123 tctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacctcaaggag 182
|| || ||||| ||||| | ||| |||||||||| || || |||||||| || ||| ||
Sbjct: 62 tcaaactggctttacattgtcccatcggggatgtatggttgtgtgaactatctgaagcag 121
Query: 183 aagtatgggaatccaacgatctacataacggagaacggaatggaccagcctggaaacttg 242
|||||||| |||||||| | | |||||| |||||||||||||| || || |||||||||
Sbjct: 122 aagtatggaaatccaacagttttcataactgagaacggaatggatcaacccggaaacttg 181
Query: 243 acccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggagctacatcggc 302
||||| || |||||| ||| |||| |||| ||||||| ||||||| ||||| |||
Sbjct: 182 acccgtgagcagtacttgcacgacaccacaagggtgcaattctacaaaggctacctcgct 241
Query: 303 cagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgcctggtctctc 362
|||||||||| ||||| || | || || |||||||||||||||||||| |||||||||
Sbjct: 242 gagctgaagaaagccatcgatgacggcgctaacgtggctggctacttcgcttggtctctc 301
Query: 363 ctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtggac 422
|| |||||||||||||||| | |||| ||| ||||||||||||| || |||||||| |||
Sbjct: 302 cttgacaacttcgagtggcagtcaggttacacgtccaagttcggaattgtctacgtcgac 361
Query: 423 ttcaacac------gctcgaacgccacccgaaggcgtcggcctactggttcagggacatg 476
|||| ||| ||||||||| ||||| |||| || |||||||||||||| ||||||
Sbjct: 362 ttcagcacgcccaagctcgaacgacaccccaaggattcagcctactggttcagagacatg 421
Query: 477 cttcagaa 484
||||||||
Sbjct: 422 cttcagaa 429
>gb|BG558112.1|BG558112 RHIZ2_67_A03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 330
Score = 246 bits (124), Expect = 3e-063
Identities = 234/268 (87%), Gaps = 7/268 (2%)
Strand = Plus / Plus
Query: 369 aacttcgagtggctggcagggtactcgtccaagttcggcatcgtctacgtggacttcaac 428
||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 1 aacttcgagtggctgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaat 60
Query: 429 acgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgcttcagaagcat 488
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgcttcagaagcat 120
Query: 489 tgagatctccag---agccgagcctgagcacggaaggtaccattttgttcagcttcgcct 545
||||||||| || ||||||||||| | | | |||| |||||||||||||| ||||
Sbjct: 121 tgagatctctagggccgccgagcctga--aggta--gtactattttgttcagctttgcct 176
Query: 546 agtgtttgggatggcccaatggttcaaatccggctcagtgcctggctaccaaaatgggaa 605
|||||| |||| |||||||||||||||||| || |||| |||||| |||||||||||
Sbjct: 177 cgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagcaaaatgggaa 236
Query: 606 caaaggacagctaccccgatcaattgtg 633
||| || ||| || |||||||||||||
Sbjct: 237 taaaagagagccactccgatcaattgtg 264
>gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 538
Score = 236 bits (119), Expect = 3e-060
Identities = 313/378 (82%), Gaps = 6/378 (1%)
Strand = Plus / Plus
Query: 113 acaggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaacta 172
|||||||||||| || ||||| ||||| | ||| |||||||||| || || ||||||||
Sbjct: 1 acaggcgaattcaaactggctttacattgtcccatcggggatgtatggttgtgtgaacta 60
Query: 173 cctcaaggagaagtatgggaatccaacgatctacataacggagaacggaatggaccagcc 232
|| ||| |||||||||| |||||||| | | |||||| |||||||||||||| || ||
Sbjct: 61 tctgaagcagaagtatggaaatccaacagttttcataactgagaacggaatggatcaacc 120
Query: 233 tggaaacttgacccgagaccagtacctgcgcgacgccacgagggtgcggttctacaggag 292
||||||||||||||| || |||||| ||| |||| |||| ||||||| ||||||| |
Sbjct: 121 tggaaacttgacccgtgagcagtacttgcacgacaccacaagggtgcaattctacaaagg 180
Query: 293 ctacatcggccagctgaagaaggccatagaccagggagcgaacgtggctggctacttcgc 352
|||| ||| |||||||||| ||||| || | || || ||||||||||||||||||||
Sbjct: 181 ctacctcgctgagctgaagaaagccatcgatgacggcgctaacgtggctggctacttcgc 240
Query: 353 ctggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgt 412
||||||||||| |||||||||||||||| | |||| ||| ||||||||||||| || ||
Sbjct: 241 ttggtctctccttgacaacttcgagtggcagtcaggttacacgtccaagttcggaattgt 300
Query: 413 ctacgtggacttcaacac------gctcgaacgccacccgaaggcgtcggcctactggtt 466
|||||| ||||||| ||| ||||||||| ||||| |||| || |||||||||||
Sbjct: 301 ctacgtcgacttcagcacgcccaagctcgaacgacaccccaaggattcagcctactggtt 360
Query: 467 cagggacatgcttcagaa 484
||| ||||||||||||||
Sbjct: 361 cagagacatgcttcagaa 378
>gb|BG051535.1|BG051535 FM1_57_G01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 143
Score = 212 bits (107), Expect = 4e-053
Identities = 134/143 (93%)
Strand = Plus / Plus
Query: 354 tggtctctcctcgacaacttcgagtggctggcagggtactcgtccaagttcggcatcgtc 413
||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||| |||
Sbjct: 1 tggtctctccttgacaacttcgagtggctgtcaggatactcgtccaagtttggcatagtc 60
Query: 414 tacgtggacttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggac 473
||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 61 tacgttgacttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggac 120
Query: 474 atgcttcagaagcattgagatct 496
|||||||||||||||||||||||
Sbjct: 121 atgcttcagaagcattgagatct 143
>gb|AI724868.1|AI724868 RHIZ1_30_D02.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 396
Score = 180 bits (91), Expect = 1e-043
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 379 ggctggcagggtactcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaac 438
||||| |||| |||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 1 ggctgtcaggatactcgtccaagtttggcatcgtctacgttgacttcaatacgctcgaac 60
Query: 439 gccacccgaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctc 497
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaccccaaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctc 119
Score = 93.7 bits (47), Expect = 2e-017
Identities = 81/91 (89%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 651 gtatgttctctctggagtttgagctgtggttattttatcgtgttggttgatcgtgtttga 710
||||||||||| ||| ||||||| ||||||||||||||||||||| |||||| | |||||
Sbjct: 294 gtatgttctctgtggcgtttgagatgtggttattttatcgtgttgattgatcttatttga 353
Query: 711 aatgcttaattcaggactgtgacatctcgag 741
||||||| |||||| ||||||||||||||
Sbjct: 354 aatgctt-cgtcaggaatgtgacatctcgag 383
Score = 87.7 bits (44), Expect = 1e-015
Identities = 95/112 (84%)
Strand = Plus / Plus
Query: 522 gtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggctc 581
|||| |||||||||||||| |||| |||||| |||| |||||||||||||||||| |
Sbjct: 147 gtactattttgttcagctttgcctcgtgttttggattgcccaatggttcaaatccaccct 206
Query: 582 agtgcctggctaccaaaatgggaacaaaggacagctaccccgatcaattgtg 633
|||| |||||| ||||||||||| ||| || ||| || |||||||||||||
Sbjct: 207 tgtgcttggctagcaaaatgggaataaaagagagccactccgatcaattgtg 258
>gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515837, DNA
sequence
Length = 585
Score = 176 bits (89), Expect = 2e-042
Identities = 226/272 (83%), Gaps = 6/272 (2%)
Strand = Plus / Minus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| || ||||||||||||||||| || |||||| ||| |||| |||| ||||||
Sbjct: 386 ggaatggatcaacctggaaacttgacccgtgagcagtacttgcacgacaccacaagggtg 327
Query: 279 cggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtg 338
| ||||||| ||||| ||| |||||||||| ||||| || | || || ||||||
Sbjct: 326 caattctacaaaggctacctcgctgagctgaagaaagccatcgatgacggcgctaacgtg 267
Query: 339 gctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtcc 398
|||||||||||||| ||||||||||| |||||||||||||||| | |||| ||| |||||
Sbjct: 266 gctggctacttcgcttggtctctccttgacaacttcgagtggcagtcaggttacacgtcc 207
Query: 399 aagttcggcatcgtctacgtggacttcaacac------gctcgaacgccacccgaaggcg 452
|||||||| || |||||||| ||||||| ||| ||||||||| ||||| ||||
Sbjct: 206 aagttcggaattgtctacgtcgacttcagcacgcccaagctcgaacgacaccccaaggat 147
Query: 453 tcggcctactggttcagggacatgcttcagaa 484
|| |||||||||||||| ||||||||||||||
Sbjct: 146 tcagcctactggttcagagacatgcttcagaa 115
>gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515908, DNA
sequence
Length = 582
Score = 176 bits (89), Expect = 2e-042
Identities = 226/272 (83%), Gaps = 6/272 (2%)
Strand = Plus / Minus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| || ||||||||||||||||| || |||||| ||| |||| |||| ||||||
Sbjct: 386 ggaatggatcaacctggaaacttgacccgtgagcagtacttgcacgacaccacaagggtg 327
Query: 279 cggttctacaggagctacatcggccagctgaagaaggccatagaccagggagcgaacgtg 338
| ||||||| ||||| ||| |||||||||| ||||| || | || || ||||||
Sbjct: 326 caattctacaaaggctacctcgctgagctgaagaaagccatcgatgacggcgctaacgtg 267
Query: 339 gctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtactcgtcc 398
|||||||||||||| ||||||||||| |||||||||||||||| | |||| ||| |||||
Sbjct: 266 gctggctacttcgcttggtctctccttgacaacttcgagtggcagtcaggttacacgtcc 207
Query: 399 aagttcggcatcgtctacgtggacttcaacac------gctcgaacgccacccgaaggcg 452
|||||||| || |||||||| ||||||| ||| ||||||||| ||||| ||||
Sbjct: 206 aagttcggaattgtctacgtcgacttcagcacgcccaagctcgaacgacaccccaaggat 147
Query: 453 tcggcctactggttcagggacatgcttcagaa 484
|| |||||||||||||| ||||||||||||||
Sbjct: 146 tcagcctactggttcagagacatgcttcagaa 115
>gb|CW154736.1|CW154736 104_557_11145760_148_36357_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145760, DNA
sequence
Length = 689
Score = 161 bits (81), Expect = 1e-037
Identities = 185/217 (85%), Gaps = 7/217 (3%)
Strand = Plus / Plus
Query: 420 gacttcaacacgctcgaacgccacccgaaggcgtcggcctactggttcagggacatgctt 479
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gacttcaatacgctcgaacggcaccccaaggcgtcggcctactggttcagggacatgctt 63
Query: 480 cagaagcattgagatctccagag---ccgagcctgagcacggaaggtaccattttgttca 536
|||||||||||||||||| || | |||||||||| | | | |||| ||||||||||
Sbjct: 64 cagaagcattgagatctctagggccaccgagcctga--aggta--gtactattttgttca 119
Query: 537 gcttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcctggctacca 596
|||| |||| |||||| |||| |||||||||||||||||| || |||| |||||| ||
Sbjct: 120 gctttgcctcgtgttttggattgcccaatggttcaaatccagccttgtgcttggctagca 179
Query: 597 aaatgggaacaaaggacagctaccccgatcaattgtg 633
|||||||| ||| || ||| || ||||| |||||||
Sbjct: 180 aaatgggagtaaaagagagccactccgatgaattgtg 216
Score = 111 bits (56), Expect = 1e-022
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 237 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 296
Query: 694 tggttgatcgtgtttgaaatgcttaattcaggactgtgacatctcgag 741
|| |||||| | |||||||||||| | |||||| |||||||||||||
Sbjct: 297 tgattgatcttatttgaaatgctt-agtcaggaacgtgacatctcgag 343
>gb|BG050964.1|BG050964 FM1_54_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 447
Score = 159 bits (80), Expect = 5e-037
Identities = 101/108 (93%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 340 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 399
Query: 61 ccgattggcaggttcaatatgtttttgcacgcaatggcaaaccgattg 108
||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 400 ccgattggcaggtccaatatgtttttgcacgcaatggcaaaccaattg 447
>gb|CW304527.1|CW304527 104_789_11465829_148_35705_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465829, DNA
sequence
Length = 562
Score = 131 bits (66), Expect = 1e-028
Identities = 161/190 (84%), Gaps = 7/190 (3%)
Strand = Plus / Minus
Query: 447 aaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctccagag---c 503
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 562 aaggcgtcggcctactggttcagggacatgcttcagaagcattgagatctctagggccac 503
Query: 504 cgagcctgagcacggaaggtaccattttgttcagcttcgcctagtgtttgggatggccca 563
||||||||| | | | |||| |||||||||||||| |||| |||||| |||| |||||
Sbjct: 502 cgagcctga--aggta--gtactattttgttcagctttgcctcgtgttttggattgccca 447
Query: 564 atggttcaaatccggctcagtgcctggctaccaaaatgggaacaaaggacagctaccccg 623
||||||||||||| || |||| |||||| |||||||||| ||| || ||| || |||
Sbjct: 446 atggttcaaatccagccttgtgcttggctagcaaaatgggagtaaaagagagccactccg 387
Query: 624 atcaattgtg 633
|| |||||||
Sbjct: 386 atgaattgtg 377
Score = 111 bits (56), Expect = 1e-022
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 356 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 297
Query: 694 tggttgatcgtgtttgaaatgcttaattcaggactgtgacatctcgag 741
|| |||||| | |||||||||||| | |||||| |||||||||||||
Sbjct: 296 tgattgatcttatttgaaatgctt-agtcaggaacgtgacatctcgag 250
>gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_26_D01_A012 3', mRNA sequence
Length = 552
Score = 131 bits (66), Expect = 1e-028
Identities = 126/146 (86%)
Strand = Plus / Plus
Query: 333 aacgtggctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtac 392
||||||| ||||||||||| ||||| ||||| |||||||||||||||||| | || |||
Sbjct: 120 aacgtggtgggctacttcgcgtggtccctcctggacaacttcgagtggctgtcgggctac 179
Query: 393 tcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcg 452
||||||||||||||||||||||||| ||||||| |||||| | || |||| ||||
Sbjct: 180 acgtccaagttcggcatcgtctacgtcgacttcacgacgctcaagcggtaccccaaggac 239
Query: 453 tcggcctactggttcagggacatgct 478
||||| ||||||||||||||||||||
Sbjct: 240 tcggcgtactggttcagggacatgct 265
>gb|CL165781.1|CL165781 104_361_10808896_116_31821_112 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808896, DNA
sequence
Length = 574
Score = 125 bits (63), Expect = 7e-027
Identities = 93/103 (90%)
Strand = Plus / Minus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 187 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 128
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 127 tcaaggagaagtatgggaatccaactgtctacattaccgagaa 85
Score = 119 bits (60), Expect = 4e-025
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 533 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 474
Query: 61 ccgattggcaggttcaatatgttt 84
||||||||||||| ||||||||||
Sbjct: 473 ccgattggcaggtccaatatgttt 450
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 353 ttgcacgcaatggcaaaccaattggacca 325
>gb|CW304526.1|CW304526 104_789_11465829_116_35701_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465829, DNA
sequence
Length = 610
Score = 125 bits (63), Expect = 7e-027
Identities = 93/103 (90%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 365 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 424
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 425 tcaaggagaagtatgggaatccaactgtctacattaccgagaa 467
Score = 119 bits (60), Expect = 4e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 19 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 78
Query: 61 ccgattggcaggttcaatatgttt 84
||||||||||||| ||||||||||
Sbjct: 79 ccgattggcaggtccaatatgttt 102
Score = 75.8 bits (38), Expect = 6e-012
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcg 264
|||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 565 ggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcg 610
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 199 ttgcacgcaatggcaaaccaattggacca 227
>gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 584
Score = 123 bits (62), Expect = 3e-026
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 333 aacgtggctggctacttcgcctggtctctcctcgacaacttcgagtggctggcagggtac 392
||||||| ||||||||||| ||||| ||||| |||||||||||||||||| | || |||
Sbjct: 156 aacgtggtgggctacttcgcgtggtccctcctggacaacttcgagtggctgtcgggctac 215
Query: 393 tcgtccaagttcggcatcgtctacgtggacttcaacacgctcgaacgccacccgaaggcg 452
||||||||||||||||||||||||| ||||||| |||||| | || |||| ||||
Sbjct: 216 acgtccaagttcggcatcgtctacgtcgacttcacgacgctcaagcggtaccccaaggac 275
Query: 453 tcggcctactggttcagggacatgct 478
||||| | ||||||||||||||||||
Sbjct: 276 tcggcgtgctggttcagggacatgct 301
>gb|BI075368.1|BI075368 IP1_19_F12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 620
Score = 123 bits (62), Expect = 3e-026
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 522 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 581
Query: 175 tcaaggagaagtatgggaatccaacgatctacat 208
||||||||||||||||||||||||| |||||||
Sbjct: 582 tcaaggagaagtatgggaatccaactgtctacat 615
Score = 119 bits (60), Expect = 4e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 176 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 235
Query: 61 ccgattggcaggttcaatatgttt 84
||||||||||||| ||||||||||
Sbjct: 236 ccgattggcaggtccaatatgttt 259
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 356 ttgcacgcaatggcaaaccaattggacca 384
>gb|CW116495.1|CW116495 104_492_11107149_116_34608_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107149, DNA
sequence
Length = 436
Score = 121 bits (61), Expect = 1e-025
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 219 ggaatggaccagcctggaaacttgacccgagaccagtacctgcgcgacgccacgagggtg 278
|||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 352 ggaatggatcagcctggaaacttgacccgtgaccagtacctgcgcgatgccacaagggtg 411
Query: 279 cggttctacaggagctacatcggcc 303
||||||||||| |||||||| ||||
Sbjct: 412 cggttctacagaagctacattggcc 436
Score = 117 bits (59), Expect = 2e-024
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 152 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 211
Query: 175 tcaaggagaagtatgggaatccaacgatctacataacggagaa 217
|| |||||||||||||||||||||| ||||||| || |||||
Sbjct: 212 tcgaggagaagtatgggaatccaactgtctacattaccgagaa 254
>gb|BZ367054.1|BZ367054 id02b04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02b04 5', DNA sequence
Length = 617
Score = 119 bits (60), Expect = 4e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 295 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 354
Query: 61 ccgattggcaggttcaatatgttt 84
||||||||||||| ||||||||||
Sbjct: 355 ccgattggcaggtccaatatgttt 378
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 475 ttgcacgcaatggcaaaccaattggacca 503
>gb|CL165780.1|CL165780 104_361_10808896_114_31820_112 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808896, DNA
sequence
Length = 682
Score = 119 bits (60), Expect = 4e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 acacatccagctacatgaaggggcagaagctggtccagctggcgcccagtagctactctg 60
|||||||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||
Sbjct: 275 acacatccagctacatgaagggacagaaactgctccagcagacgcccagtagctactctg 334
Query: 61 ccgattggcaggttcaatatgttt 84
||||||||||||| ||||||||||
Sbjct: 335 ccgattggcaggtccaatatgttt 358
Score = 75.8 bits (38), Expect = 6e-012
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 115 aggcgaattctaagtggctctacatcgccccgacggggatgtacgggtgcgtgaactacc 174
||||||||||||| ||||| ||||||| ||||||||||||||| || || ||||||||||
Sbjct: 621 aggcgaattctaattggctttacatcgtcccgacggggatgtatggatgtgtgaactacc 680
Query: 175 tc 176
||
Sbjct: 681 tc 682
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 85 ttgcacgcaatggcaaaccgattggacca 113
||||||||||||||||||| |||||||||
Sbjct: 455 ttgcacgcaatggcaaaccaattggacca 483
>gb|CW092081.1|CW092081 104_454_10998932_114_33037_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998932, DNA
sequence
Length = 616
Score = 111 bits (56), Expect = 1e-022
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 602 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 543
Query: 694 tggttgatcgtgtttgaaatgcttaattcaggactgtgacatctcgag 741
|| |||||| | |||||||||||| | |||||| |||||||||||||
Sbjct: 542 tgattgatcttatttgaaatgctt-agtcaggaacgtgacatctcgag 496
>gb|CW154735.1|CW154735 104_557_11145760_116_36358_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145760, DNA
sequence
Length = 742
Score = 111 bits (56), Expect = 1e-022
Identities = 96/108 (88%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 634 atgttgtgtgtttgtgggtatgttctctctggagtttgagctgtggttattttatcgtgt 693
|||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 561 atgttgtgagtttgtgagtatgttctctgtggcgtttgagatgtggttattttatcgtgt 502
Query: 694 tggttgatcgtgtttgaaatgcttaattcaggactgtgacatctcgag 741
|| |||||| | |||||||||||| | |||||| |||||||||||||
Sbjct: 501 tgattgatcttatttgaaatgctt-agtcaggaacgtgacatctcgag 455
Score = 73.8 bits (37), Expect = 2e-011
Identities = 89/105 (84%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 529 tttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggctcagtgcct 588
|||||||||||| |||| ||||||||||| |||||||||||||||||| || |||| |
Sbjct: 685 tttgttcagctt-gcctcgtgtttgggattgcccaatggttcaaatccagccttgtgctt 627
Query: 589 ggctaccaaaatgggaacaaaggacagctaccccgatcaattgtg 633
||||| |||||||||| ||| || ||| || ||||| |||||||
Sbjct: 626 ggctagcaaaatgggagtaaaagagagccactccgatgaattgtg 582
Score = 42.1 bits (21), Expect = 0.078
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 469 gggacatgcttcagaagcattgagatctc 497
|||||||||| ||||||||||||||||||
Sbjct: 742 gggacatgct-cagaagcattgagatctc 715
>gb|BF656542.1|BF656542 FM1_51_D01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 237
Score = 79.8 bits (40), Expect = 4e-013
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 522 gtaccattttgttcagcttcgcctagtgtttgggatggcccaatggttcaaatccggctc 581
|||| |||||||||||||| |||| |||||| |||| |||||||||||||||||| |
Sbjct: 17 gtactattttgttcagctttgcctcgtgttttggattgcccaatggttcaaatccaccct 76
Query: 582 agtgcctggctaccaaaatgggaacaaaggacagctaccccgatcaattgtg 633
|||| |||||| ||||||||||| ||| || | | || |||||||||||||
Sbjct: 77 tgtgcttggctagcaaaatgggaataaaagagacccactccgatcaattgtg 128
Score = 71.9 bits (36), Expect = 9e-011
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 651 gtatgttctctctggagtttgagctgtggttattttatcgtgttggttgatcgtgtttga 710
||||||||||| ||| ||||||| ||||||||||| ||||||||| |||||| | |||||
Sbjct: 164 gtatgttctctgtggcgtttgagatgtggttattt-atcgtgttgattgatcttatttga 222
Query: 711 aatgctta 718
||||||||
Sbjct: 223 aatgctta 230
>gb|CW476625.1|CW476625 fsbb001f233j03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233j03, DNA
sequence
Length = 571
Score = 61.9 bits (31), Expect = 8e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 342 ggctacttcgcctggtctctcctcgacaacttcgagtgg 380
||||||||||||||||| || ||||||||||||||||||
Sbjct: 18 ggctacttcgcctggtccctgctcgacaacttcgagtgg 56
>gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 389
Score = 61.9 bits (31), Expect = 8e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 342 ggctacttcgcctggtctctcctcgacaacttcgagtgg 380
||||||||||||||||| || ||||||||||||||||||
Sbjct: 300 ggctacttcgcctggtccctgctcgacaacttcgagtgg 338
>gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 374
Score = 61.9 bits (31), Expect = 8e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 342 ggctacttcgcctggtctctcctcgacaacttcgagtgg 380
||||||||||||||||| || ||||||||||||||||||
Sbjct: 301 ggctacttcgcctggtccctgctcgacaacttcgagtgg 339
>gb|BG465924.1|BG465924 RHIZ2_46_C09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 232
Score = 60.0 bits (30), Expect = 3e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 548 tgtttgggatggcccaatggttcaaatccggctcagtgcctggctaccaaaatgggaaca 607
||||| |||| |||||||||||||||||| | |||| |||||| ||||||||||| |
Sbjct: 1 tgttttggattgcccaatggttcaaatccacccttgtgcttggctagcaaaatgggaata 60
Query: 608 aaggacagctaccccgatcaattgtg 633
|| || ||| || |||||||||||||
Sbjct: 61 aaagagagccactccgatcaattgtg 86
Score = 56.0 bits (28), Expect = 5e-006
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 667 gtttgagctgtggttattttatcgtgttggttgatcgtgtttgaaatgctta 718
||||||| ||||||||||| ||||||||| |||||| | |||||||||||||
Sbjct: 139 gtttgagatgtggttattt-atcgtgttgattgatcttatttgaaatgctta 189
>gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 345 tacttcgcctggtctctcctcgacaacttcgagtgg 380
|||||||||||||| || ||||||||||||||||||
Sbjct: 293 tacttcgcctggtccctgctcgacaacttcgagtgg 328
>gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_25_F02_A002 3', mRNA sequence
Length = 728
Score = 56.0 bits (28), Expect = 5e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 341 tggctacttcgcctggtctctcctcgacaacttcgagtgg 380
||||||||||| |||||||| ||||||||||||||||||
Sbjct: 447 tggctacttcgtgtggtctcttctcgacaacttcgagtgg 486
>gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_H03_A007 3', mRNA sequence
Length = 493
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 342 ggctacttcgcctggtctctcctcgacaacttcgagtgg 380
||||||||||||||||| || ||||||||||| ||||||
Sbjct: 267 ggctacttcgcctggtccctgctcgacaacttggagtgg 305
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 167,171
Number of Sequences: 832831
Number of extensions: 167171
Number of successful extensions: 47330
Number of sequences better than 0.5: 210
Number of HSP's better than 0.5 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46884
Number of HSP's gapped (non-prelim): 423
length of query: 806
length of database: 491,359,669
effective HSP length: 20
effective length of query: 786
effective length of database: 474,703,049
effective search space: 373116596514
effective search space used: 373116596514
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)