BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF485438.1|CF485438 POL1_31_B12.g1_A002 Pollen Sorghum b... 771 0.0
gb|CF483535.1|CF483535 POL1_22_H11.g1_A002 Pollen Sorghum b... 769 0.0
gb|CF759226.1|CF759226 DSAF1_42_E07.b1_A011 Drought-stresse... 672 0.0
gb|CF760222.1|CF760222 DSAF1_57_A03.b1_A011 Drought-stresse... 617 e-175
gb|CN127236.1|CN127236 RHOH1_21_G05.g3_A002 Acid- and alkal... 569 e-160
gb|CN130926.1|CN130926 RHOH1_44_F10.g1_A002 Acid- and alkal... 569 e-160
gb|CN130940.1|CN130940 RHOH1_44_H04.g1_A002 Acid- and alkal... 569 e-160
gb|CX607581.1|CX607581 ANR1_29_C03.g1_A002 Anaerobic roots ... 537 e-151
gb|CN130857.1|CN130857 RHOH1_44_F10.b1_A002 Acid- and alkal... 490 e-136
gb|CF483457.1|CF483457 POL1_22_H11.b1_A002 Pollen Sorghum b... 408 e-112
gb|CN130870.1|CN130870 RHOH1_44_H04.b1_A002 Acid- and alkal... 406 e-111
gb|CX607497.1|CX607497 ANR1_29_C03.b1_A002 Anaerobic roots ... 307 9e-082
gb|CX607570.1|CX607570 ANR1_29_B04.g1_A002 Anaerobic roots ... 293 1e-077
gb|CN152337.1|CN152337 WOUND1_81_A03.g1_A002 Wounded leaves... 283 1e-074
gb|CD220686.1|CD220686 CCC1_68_A01.g1_A007 Callus culture/c... 280 2e-073
gb|CF480922.1|CF480922 POL1_68_H06.g1_A002 Pollen Sorghum b... 280 2e-073
gb|AW924501.1|AW924501 WS1_70_C08.b1_A002 Water-stressed 1 ... 276 3e-072
gb|AW923964.1|AW923964 WS1_31_E12.b1_A002 Water-stressed 1 ... 274 1e-071
gb|AW922642.1|AW922642 DG1_46_G01.b1_A002 Dark Grown 1 (DG1... 268 8e-070
gb|BF657231.1|BF657231 OV2_22_C06.b1_A002 Ovary 2 (OV2) Sor... 262 5e-068
gb|BG649617.1|BG649617 RHIZ2_81_D03.b1_A003 Rhizome2 (RHIZ2... 262 5e-068
gb|BG357973.1|BG357973 OV2_32_F03.b1_A002 Ovary 2 (OV2) Sor... 260 2e-067
gb|CF482087.1|CF482087 POL1_76_B09.g1_A002 Pollen Sorghum b... 260 2e-067
gb|CW170352.1|CW170352 104_580_11155162_116_36512_035 Sorgh... 234 1e-059
gb|AW287531.2|AW287531 LG1_242_C03.b1_A002 Light Grown 1 (L... 226 3e-057
gb|AW677175.1|AW677175 DG1_5_G07.b1_A002 Dark Grown 1 (DG1)... 226 3e-057
gb|AW923118.1|AW923118 DG1_49_C10.b1_A002 Dark Grown 1 (DG1... 226 3e-057
gb|BE360510.1|BE360510 DG1_64_A12.b1_A002 Dark Grown 1 (DG1... 226 3e-057
gb|BG463717.1|BG463717 EM1_51_B03.b1_A002 Embryo 1 (EM1) So... 226 3e-057
gb|BG464969.1|BG464969 EM1_34_D09.b1_A002 Embryo 1 (EM1) So... 226 3e-057
gb|AW922809.1|AW922809 DG1_46_G01.g1_A002 Dark Grown 1 (DG1... 186 2e-045
gb|CX607486.1|CX607486 ANR1_29_B04.b1_A002 Anaerobic roots ... 176 2e-042
gb|CW170353.1|CW170353 104_580_11155162_148_36511_035 Sorgh... 174 9e-042
gb|BF656888.1|BF656888 OV2_22_C06.g1_A002 Ovary 2 (OV2) Sor... 165 9e-039
gb|BG158183.1|BG158183 EM1_10_F10.g1_A002 Embryo 1 (EM1) So... 165 9e-039
gb|BG605778.1|BG605778 RHIZ2_81_D03.g1_A003 Rhizome2 (RHIZ2... 165 9e-039
gb|CW091874.1|CW091874 104_454_10998818_114_33037_013 Sorgh... 159 5e-037
gb|CW241511.1|CW241511 104_700_11218812_148_37541_036 Sorgh... 159 5e-037
gb|CW251503.1|CW251503 104_714_11223967_116_35068_030 Sorgh... 159 5e-037
gb|CC059618.1|CC059618 ii25e08.b1 WGS-SbicolorF (DH5a methy... 151 1e-034
gb|CW420290.1|CW420290 fsbb001f126i19f0 Sorghum methylation... 151 1e-034
gb|BQ655955.1|BQ655955 pRC0147 Sorghum halepense rhizome cD... 151 1e-034
gb|CF480856.1|CF480856 POL1_68_H06.b1_A002 Pollen Sorghum b... 143 3e-032
gb|BZ781233.1|BZ781233 ii25e08.g1 WGS-SbicolorF (DH5a methy... 137 2e-030
gb|BM317742.1|BM317742 WS1_64_H09.b9_A002 Water-stressed 1 ... 131 1e-028
gb|AW679772.1|AW679772 WS1_31_E12.g1_A002 Water-stressed 1 ... 125 7e-027
gb|BE363639.1|BE363639 WS1_64_H09.g1_A002 Water-stressed 1 ... 125 7e-027
gb|BE353117.1|BE353117 DG1_4_F11.g1_A002 Dark Grown 1 (DG1)... 123 3e-026
gb|BE593290.1|BE593290 WS1_100_A02.g1_A002 Water-stressed 1... 123 3e-026
gb|BG357653.1|BG357653 OV2_32_F03.g1_A002 Ovary 2 (OV2) Sor... 123 3e-026
gb|BG463804.1|BG463804 EM1_51_B03.g1_A002 Embryo 1 (EM1) So... 123 3e-026
gb|CD220585.1|CD220585 CCC1_68_A01.b1_A007 Callus culture/c... 123 3e-026
gb|CW251504.1|CW251504 104_714_11223967_148_35072_030 Sorgh... 121 1e-025
gb|CW420291.1|CW420291 fsbb001f126i19k0 Sorghum methylation... 121 1e-025
gb|AW677303.1|AW677303 DG1_5_G07.g1_A002 Dark Grown 1 (DG1)... 109 4e-022
gb|BG464804.1|BG464804 EM1_34_D09.g1_A002 Embryo 1 (EM1) So... 101 1e-019
gb|CF758081.1|CF758081 DSAF1_27_A09.g1_A011 Drought-stresse... 96 7e-018
gb|BE593704.1|BE593704 WS1_100_A02.b1_A002 Water-stressed 1... 88 2e-015
gb|CW043685.1|CW043685 104_279_10508516_114_30276 Sorghum m... 82 1e-013
gb|BG048776.1|BG048776 OV1_22_H05.b1_A002 Ovary 1 (OV1) Sor... 82 1e-013
gb|BE358850.1|BE358850 DG1_32_E01.g1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|BG049071.1|BG049071 OV1_22_H05.g1_A002 Ovary 1 (OV1) Sor... 64 2e-008
gb|AW924612.1|AW924612 WS1_70_C08.g1_A002 Water-stressed 1 ... 60 4e-007
gb|AW678085.1|AW678085 WS1_13_G12.b1_A002 Water-stressed 1 ... 56 6e-006
gb|AW678167.1|AW678167 WS1_13_G12.g1_A002 Water-stressed 1 ... 56 6e-006
gb|AW923130.1|AW923130 DG1_49_C10.g1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|CW224062.1|CW224062 104_660_11203250_116_37444_011 Sorgh... 52 9e-005
gb|CW198639.1|CW198639 104_623_11183081_148_37057_073 Sorgh... 40 0.34
gb|BG273264.1|BG273264 OV2_25_B12.g1_A002 Ovary 2 (OV2) Sor... 40 0.34
gb|BG273399.1|BG273399 OV2_25_B12.b1_A002 Ovary 2 (OV2) Sor... 40 0.34
gb|CF483060.1|CF483060 POL1_11_B03.b1_A002 Pollen Sorghum b... 40 0.34
gb|CF486045.1|CF486045 POL1_35_G12.b1_A002 Pollen Sorghum b... 40 0.34
gb|CF486123.1|CF486123 POL1_35_G12.g1_A002 Pollen Sorghum b... 40 0.34
gb|CF486526.1|CF486526 POL1_38_E12.b1_A002 Pollen Sorghum b... 40 0.34
gb|CF486614.1|CF486614 POL1_38_E12.g1_A002 Pollen Sorghum b... 40 0.34
>gb|CF485438.1|CF485438 POL1_31_B12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_31_B12_A002 5', mRNA sequence
Length = 600
Score = 771 bits (389), Expect = 0.0
Identities = 491/525 (93%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ccatgggtatcgacctcgtcgccggcggccgcaacaagaagaccaagcgcacggcgccca 135
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||||||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||||
Sbjct: 136 agtccgacgatgtctatctcaagctccttgtcaagctctaccacttccttgtccgtagga 195
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 196 caaagagcaacttcaacgccgtgatcctgaagcgactgttcatgagcaagaccaaccgcc 255
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||
Sbjct: 256 cgccgctctcgatgcgccgcctcgttaagttcatggaggggaagagtgatcagattgccg 315
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct: 316 ttattgtgggcaccgtgactgacgacaagaggatcaacgaggtgccggcgatgaaggtgt 375
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 376 gtgcgctcaggttcactgagacagctagggccaggatcatcaatgccggtggagagtgcc 435
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
|||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||
Sbjct: 436 tcaccttcgaccagcttgcgctccgtgccccgcacgggcaaaacacggttctcctgaggg 495
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||
Sbjct: 496 gtcctaagaacgctagggaagctgttaagcacttcggccctgcaccaggagtgccacaca 555
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgaga 594
|||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 556 gccacaccaagccttacgttcgctcaaagggaaggaagtttgaga 600
>gb|CF483535.1|CF483535 POL1_22_H11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_22_H11_A002 5', mRNA sequence
Length = 596
Score = 769 bits (388), Expect = 0.0
Identities = 490/524 (93%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccatgggtatcgacctcgtcgccggcggccgcaacaagaagaccaagcgcacggcgccca 132
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 133 agtccgacgatgtctatctcaagctccttgtcaagctctaccgcttccttgtccgtagga 192
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 193 caaagagcaacttcaacgccgtgatcctgaagcgactgttcatgagcaagaccaaccgcc 252
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||
Sbjct: 253 cgccgctctcgatgcgccgcctcgttaagttcatggaggggaagagtgatcagattgccg 312
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |
Sbjct: 313 ttattgtgggcaccgtgactgacgacaagaggatcaacgaggtgccggcgatgaaagtgt 372
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 373 gtgcgctcaggttcactgagacagctagggccaggatcatcaatgccggtggagagtgcc 432
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
|||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 433 tcaccttcgaccagcttgcgctccgtgccccgctcgggcaaaacacggttctcctgaggg 492
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcaca 549
||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||
Sbjct: 493 gtcctaagaacgctagggaagctgttaagcacttcggccctgcaccaggagtgccacaca 552
Query: 550 gccacaccaagccttatgttcgctcgaagggtaggaagtttgag 593
|||||||||||||||| |||||||| ||||| | ||||||||||
Sbjct: 553 gccacaccaagccttacgttcgctcaaagggaaagaagtttgag 596
>gb|CF759226.1|CF759226 DSAF1_42_E07.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_42_E07_A011 5', mRNA sequence
Length = 503
Score = 672 bits (339), Expect = 0.0
Identities = 426/455 (93%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccatgggtatcgacctcgtcgccggcggccgcaacaagaagaccaagcgcacggcgccca 108
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 109 agtccgacgatgtctatctcaagctccttgtcaagctctaccgcttccttgtccgtagga 168
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 169 caaagagcaacttcaacgccgtgatcctgaagcgactgttcatgagcaagaccaaccgcc 228
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||
Sbjct: 229 cgccgctctcgatgcgccgcctcgttaagttcatggaggggaagagtgatcagattgccg 288
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct: 289 ttattgtgggcaccgtgactgacgacaagaggatcaacgaggtgccggcgatgaaggtgt 348
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 349 gtgcgctcaggttcactgagacagctagggccaggatcatcaatgccggtggagagtgcc 408
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggg 489
|||||||||||||||| |||||||||||||| || ||| || |||||||||| |||||||
Sbjct: 409 tcaccttcgaccagcttgcgctccgtgccccgctcggggaagacacggttctcctgaggg 468
Query: 490 gtcctaagaacgctagggaagctgtcaggcacttc 524
||||||||||||||||||||||||| | |||||||
Sbjct: 469 gtcctaagaacgctagggaagctgttaagcacttc 503
>gb|CF760222.1|CF760222 DSAF1_57_A03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_57_A03_A011 5', mRNA sequence
Length = 454
Score = 617 bits (311), Expect = e-175
Identities = 383/407 (94%)
Strand = Plus / Plus
Query: 70 ccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccca 129
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ccatgggtatcgacctcgtcgccggcggccgcaacaagaagaccaagcgcacggcgccca 107
Query: 130 agtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagga 189
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 108 agtccgacgatgtctatctcaagctccttgtcaagctctaccgcttccttgtccgtagga 167
Query: 190 caaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcc 249
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 168 caaagagcaacttcaacgccgtgatcctgaagcgactgttcatgagcaagaccaaccgcc 227
Query: 250 cgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccg 309
||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||
Sbjct: 228 cgccgctctcgatgcgccgcctcgttaagttcatggaggggaagagtgatcagattgccg 287
Query: 310 tgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtct 369
| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
Sbjct: 288 ttattgtgggcaccgtgactgacgacaagaggatcaacgaggtgccggcgatgaaggtgt 347
Query: 370 gcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcc 429
| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 348 gtgcgctcaggttcactgagacagctagggccaggatcatcaatgccggtggagagtgcc 407
Query: 430 tcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacg 476
|||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 408 tcaccttcgaccagcttgcgctccgtgccccgctcgggcaaaacacg 454
>gb|CN127236.1|CN127236 RHOH1_21_G05.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G05_A002 5', mRNA sequence
Length = 809
Score = 569 bits (287), Expect = e-160
Identities = 494/563 (87%)
Strand = Plus / Plus
Query: 72 atgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaag 131
||||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 64 atgggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaag 123
Query: 132 tccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggaca 191
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 124 tccgacgatgtctacctcaagctcctcgtcaagctgtaccgcttccttgttcggaggacc 183
Query: 192 aagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccg 251
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 184 aagagcaacttcaacgctgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 243
Query: 252 ccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtg 311
|| |||||| | ||||||||||||| ||||||||||| |||| ||||||| || |||
Sbjct: 244 cctctctcgctccgccgcctcgtcaacttcatggagggcaaggagaatcagattgctgtg 303
Query: 312 attgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgc 371
|| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 304 atagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggct 363
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| | |||||||| || |||||||||
Sbjct: 364 gcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgcctc 423
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || ||||||||||||||||||||
Sbjct: 424 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctgagggga 483
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| |||||||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 484 cctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 543
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 544 cacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 603
Query: 612 aacagcaggggcttcaaggtcta 634
|||||||| ||||||||||||||
Sbjct: 604 aacagcagaggcttcaaggtcta 626
>gb|CN130926.1|CN130926 RHOH1_44_F10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_F10_A002 5', mRNA sequence
Length = 809
Score = 569 bits (287), Expect = e-160
Identities = 494/563 (87%)
Strand = Plus / Plus
Query: 72 atgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaag 131
||||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 64 atgggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaag 123
Query: 132 tccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggaca 191
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 124 tccgacgatgtctacctcaagctcctcgtcaagctgtaccgcttccttgttcggaggacc 183
Query: 192 aagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccg 251
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 184 aagagcaacttcaacgctgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 243
Query: 252 ccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtg 311
|| |||||| | ||||||||||||| ||||||||||| |||| ||||||| || |||
Sbjct: 244 cctctctcgctccgccgcctcgtcaacttcatggagggcaaggagaatcagattgctgtg 303
Query: 312 attgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgc 371
|| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 304 atagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggct 363
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| | |||||||| || |||||||||
Sbjct: 364 gcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgcctc 423
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || ||||||||||||||||||||
Sbjct: 424 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctgagggga 483
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| |||||||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 484 cctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 543
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 544 cacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 603
Query: 612 aacagcaggggcttcaaggtcta 634
|||||||| ||||||||||||||
Sbjct: 604 aacagcagaggcttcaaggtcta 626
>gb|CN130940.1|CN130940 RHOH1_44_H04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_H04_A002 5', mRNA sequence
Length = 816
Score = 569 bits (287), Expect = e-160
Identities = 494/563 (87%)
Strand = Plus / Plus
Query: 72 atgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaag 131
||||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 64 atgggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaag 123
Query: 132 tccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggaca 191
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 124 tccgacgatgtctacctcaagctcctcgtcaagctgtaccgcttccttgttcggaggacc 183
Query: 192 aagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccg 251
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 184 aagagcaacttcaacgctgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 243
Query: 252 ccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtg 311
|| |||||| | ||||||||||||| ||||||||||| |||| ||||||| || |||
Sbjct: 244 cctctctcgctccgccgcctcgtcaacttcatggagggcaaggagaatcagattgctgtg 303
Query: 312 attgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgc 371
|| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 304 atagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggct 363
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| | |||||||| || |||||||||
Sbjct: 364 gcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgcctc 423
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || ||||||||||||||||||||
Sbjct: 424 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctgagggga 483
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| |||||||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 484 cctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 543
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 544 cacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 603
Query: 612 aacagcaggggcttcaaggtcta 634
|||||||| ||||||||||||||
Sbjct: 604 aacagcagaggcttcaaggtcta 626
>gb|CX607581.1|CX607581 ANR1_29_C03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C03_A002 5', mRNA sequence
Length = 715
Score = 537 bits (271), Expect = e-151
Identities = 490/563 (87%)
Strand = Plus / Plus
Query: 72 atgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaag 131
||||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 74 atgggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaag 133
Query: 132 tccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggaca 191
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 134 tccgacgatgtctacctcaagctcctcgtcaagctgtaccgcttccttgttcggaggacc 193
Query: 192 aagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccg 251
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 194 aagagcaacttcaacgctgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 253
Query: 252 ccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtg 311
|| |||||| | || |||||||||| ||||||||||| |||| ||||||| || |||
Sbjct: 254 cctctctcgctccggcgcctcgtcaacttcatggagggcaaggagaatcagattgctgtg 313
Query: 312 attgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgc 371
|| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 314 atagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggct 373
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| |||||||| || |||||||||
Sbjct: 374 gcgctcaggttcactgagacggccagggcccggattgggaatgctggtggcgagtgcctc 433
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || ||||||||||||||||||||
Sbjct: 434 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctgagggga 493
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| ||| |||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 494 cctaagaatgctggggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 553
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 554 cacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 613
Query: 612 aacagcaggggcttcaaggtcta 634
||||||| ||||||||||||||
Sbjct: 614 aacagcacaggcttcaaggtcta 636
>gb|CN130857.1|CN130857 RHOH1_44_F10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_F10_A002 3', mRNA sequence
Length = 718
Score = 490 bits (247), Expect = e-136
Identities = 484/563 (85%)
Strand = Plus / Plus
Query: 72 atgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaag 131
||||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 4 atgggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaag 63
Query: 132 tccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcaggaca 191
|| || ||||| |||||||||||||| |||||||| |||||||||||||| || |||||
Sbjct: 64 tctgaggatgtttacctcaagctcctagtcaagctgtaccgcttccttgttcggaggacc 123
Query: 192 aagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgcccg 251
||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||| |
Sbjct: 124 aagagcaacttcaacgctgtgatcctgaagcggcttttcatgagcaagaccaaccgccgg 183
Query: 252 ccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtg 311
|| ||| | | ||||||||||||| ||||||||||| |||| ||||||| || |||
Sbjct: 184 cctttctggctccgccgcctcgtcaacttcatggagggcaaggagaatcagattgctgtg 243
Query: 312 attgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgc 371
|| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 244 atagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggct 303
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| | |||||||| || |||||||||
Sbjct: 304 gcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgcctc 363
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || |||||||||||| |||||||
Sbjct: 364 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgttgagggga 423
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| |||||||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 424 cctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 483
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
|||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 484 cacaggaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 543
Query: 612 aacagcaggggcttcaaggtcta 634
|||||||| ||||||||||||||
Sbjct: 544 aacagcagaggcttcaaggtcta 566
>gb|CF483457.1|CF483457 POL1_22_H11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_22_H11_A002 3', mRNA sequence
Length = 527
Score = 408 bits (206), Expect = e-112
Identities = 263/282 (93%)
Strand = Plus / Plus
Query: 355 cggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatg 414
|||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 cggcgatgaaagtgtgtgcgctcaggttcactgagacagctagggccaggatcatcaatg 60
Query: 415 ctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaaca 474
| || |||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 61 ccggtggagagtgcctcaccttcgaccagcttgcgctccgtgccccgctcgggcaaaaca 120
Query: 475 cggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcac 534
||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||
Sbjct: 121 cggttctcctgaggggtcctaagaacgctagggaagctgttaagcacttcggccctgcac 180
Query: 535 caggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgaga 594
|||||||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 181 caggagtgccacacagccacaccaagccttacgttcgctcaaagggaaggaagtttgaga 240
Query: 595 aggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
|||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 241 aggcaagaggtaggaggaacagcaggggcttcaaggtctaag 282
>gb|CN130870.1|CN130870 RHOH1_44_H04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_H04_A002 3', mRNA sequence
Length = 741
Score = 406 bits (205), Expect = e-111
Identities = 388/449 (86%)
Strand = Plus / Plus
Query: 186 aggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaac 245
||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 2 aggaccaagagcaacttcaacgctgtgatcctgaagcggctcttcatgagcaagaccaac 61
Query: 246 cgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagatc 305
|||||||| |||||||| ||| ||||||||| ||||||||||| |||| |||||||
Sbjct: 62 cgcccgcctctctcgatccgctgcctcgtcaacttcatggagggcaaggagaatcagatt 121
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| ||||| |||||||||||||| |||||||||||| || ||||| || || ||||||
Sbjct: 122 gctgtgatagtgggcaccgtgactgacgacaagagggtctatgaggtcccagcaatgaag 181
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| |||||||||||||||||||| || |||||| |||| | |||||||| || |||
Sbjct: 182 gtggctgcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgag 241
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
||||||||||| |||||||| ||||| |||||||| || || || |||||||||||||||
Sbjct: 242 tgcctcacctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctg 301
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| |||||||| |||||||||||||| | |||||| || ||||| || || |||||
Sbjct: 302 aggggacctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccc 361
Query: 546 cacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagagga 605
||||||||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 362 cacagccacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagagga 421
Query: 606 aggaggaacagcaggggcttcaaggtcta 634
|||||||||||||| ||||||||||||||
Sbjct: 422 aggaggaacagcagaggcttcaaggtcta 450
>gb|CX607497.1|CX607497 ANR1_29_C03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C03_A002 3', mRNA sequence
Length = 669
Score = 307 bits (155), Expect = 9e-082
Identities = 317/371 (85%)
Strand = Plus / Plus
Query: 264 cgccgcctcgtcaggttcatggaggggaagggtgatcagatcgccgtgattgtgggcacc 323
||||||||||||| ||||||||||| |||| ||||||| || ||||| |||||||||
Sbjct: 4 cgccgcctcgtcaacttcatggagggcaaggagaatcagattgctgtgatagtgggcacc 63
Query: 324 gtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttc 383
||||| |||||||||||| || ||||| || || |||||||| ||||||||||||
Sbjct: 64 gtgactgacgacaagagggtctatgaggtaccagcaatgaaggtggctgcgctcaggttc 123
Query: 384 actgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccag 443
|||||||| || |||||| |||| | |||||||| || |||||||||||||| ||||||
Sbjct: 124 actgagacggccagggcccggattgtgaatgctggtggcgagtgcctcacctttgaccag 183
Query: 444 ctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgct 503
|| ||||| |||||||| || || || |||||||||||||||||||| |||||||| |||
Sbjct: 184 cttgcgctgcgtgccccgctgggccagaacacggttctgctgaggggacctaagaatgct 243
Query: 504 agggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcct 563
||||||||||| | |||||| || ||||| || || ||||| ||||||||||| |||||
Sbjct: 244 agggaagctgtgaagcactttggccctgcgcctggtgtgccccacagccacacgaagcca 303
Query: 564 tatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggc 623
|| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 304 tacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggaggaacagcagaggc 363
Query: 624 ttcaaggtcta 634
|||||||||||
Sbjct: 364 ttcaaggtcta 374
>gb|CX607570.1|CX607570 ANR1_29_B04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_B04_A002 5', mRNA sequence
Length = 710
Score = 293 bits (148), Expect = 1e-077
Identities = 462/566 (81%), Gaps = 3/566 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 69 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 128
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 188
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | ||||||||||||| |||||||||
Sbjct: 189 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcagaaccaaccgc 248
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 249 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 308
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || |||||||||
Sbjct: 309 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcgatgaag 368
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 369 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 428
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 429 tgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctcttg 488
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| || |||| ||| | || || || |||||||| || || || || |||||
Sbjct: 489 aggggccccgagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccg 548
Query: 546 cacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagagga 605
||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| | ||
Sbjct: 549 cacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtggc 608
Query: 606 aggaggaacagcaggggcttcaaggt 631
|||||||||||| | || ||||||||
Sbjct: 609 aggaggaacagccgtggattcaaggt 634
>gb|CN152337.1|CN152337 WOUND1_81_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_A03_A002 5', mRNA sequence
Length = 819
Score = 283 bits (143), Expect = 1e-074
Identities = 436/533 (81%), Gaps = 3/533 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 279 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 338
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 339 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 398
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 399 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 458
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || ||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 459 ccaccaatttccctgcgccgccgtgtcaagttcatggaaggaaaggaggagaagaacatt 518
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 519 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 578
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 579 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 638
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 639 tgcctcacatttgaccagctagctctccgtgctccacttggcgagaacacggtcctcttg 698
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 699 aggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccg 758
Query: 546 cacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggc 598
||||||||||||||||| ||||| ||||| ||||| |||||||| || |||||
Sbjct: 759 cacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggc 811
>gb|CD220686.1|CD220686 CCC1_68_A01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_68_A01_A007 5', mRNA sequence
Length = 636
Score = 280 bits (141), Expect = 2e-073
Identities = 460/566 (81%), Gaps = 3/566 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | ||||||| |||||||||||| ||||||
Sbjct: 67 gccatgggtatcgacctcgtcgccggtgggaggaacaagaggaccaagcgcaccgcgccc 126
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 127 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 186
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 187 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 246
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || | |||||||| |||| ||||||||| || |||| || || ||
Sbjct: 247 ccaccaatttcccttcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 306
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 307 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 366
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 367 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 426
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 427 tgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctcttg 486
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 487 aggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccg 546
Query: 546 cacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagagga 605
||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| | ||
Sbjct: 547 cacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtggc 606
Query: 606 aggaggaacagcaggggcttcaaggt 631
| |||||||||| | || ||||||||
Sbjct: 607 angaggaacagccgtggattcaaggt 632
>gb|CF480922.1|CF480922 POL1_68_H06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_H06_A002 5', mRNA sequence
Length = 758
Score = 280 bits (141), Expect = 2e-073
Identities = 462/567 (81%), Gaps = 4/567 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 60 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 119
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 120 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 179
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 180 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 239
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 240 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 299
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 300 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 359
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgct-ggcggaga 424
|| || || |||||||| | |||||| || |||||||| |||||||| || || ||
Sbjct: 360 gttactgccctgaggttcaccgggacagcaagagccaggattgtcaatgctgggtgggga 419
Query: 425 gtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgct 484
||||||||| || |||||||| || |||||||| |||||||| | |||||||| || |
Sbjct: 420 gtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctctt 479
Query: 485 gaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcc 544
|||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 480 gaggggccccaagaatgctcgtgaggcggtgaggcactttggcatggctcctggcgtgcc 539
Query: 545 tcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagagg 604
||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| | ||
Sbjct: 540 gcacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtgg 599
Query: 605 aaggaggaacagcaggggcttcaaggt 631
|||||||||||| | || ||||||||
Sbjct: 600 caggaggaacagccgtggattcaaggt 626
>gb|AW924501.1|AW924501 WS1_70_C08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 276 bits (139), Expect = 3e-072
Identities = 417/509 (81%), Gaps = 3/509 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 50 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 109
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 110 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 169
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 170 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 229
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 230 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 289
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 290 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 349
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 350 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 409
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 410 tgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctcttg 469
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 470 aggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccg 529
Query: 546 cacagccacaccaagccttatgttcgctc 574
||||||||||||||||| ||||| |||||
Sbjct: 530 cacagccacaccaagccatatgtgcgctc 558
>gb|AW923964.1|AW923964 WS1_31_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 578
Score = 274 bits (138), Expect = 1e-071
Identities = 431/528 (81%), Gaps = 3/528 (0%)
Strand = Plus / Plus
Query: 107 gaagaccaagcgcacggcgcccaagtccgacgatgtctacctcaagctcctcgtcaagct 166
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gaagaccaagcgcaccgcgcccaagtccgacgatgtctacctcaagctcctcgtcaagct 68
Query: 167 ctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagcgcct 226
|||||| ||||| || | ||||| ||||||||||||||||| || ||||||||| | ||
Sbjct: 69 ctaccgtttcctggttaggaggaccaagagcaacttcaacgctgtcatcctcaagaggct 128
Query: 227 cttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|||||||||||| ||||||||||| || | || |||||||||| |||| |||||||||
Sbjct: 129 cttcatgagcaaaaccaaccgcccaccaatttccctgcgccgccttgtcaagttcatgga 188
Query: 287 ggggaagggtgatcag---atcgccgtgattgtgggcaccgtgaccgacgacaagaggat 343
|| |||| || || || || |||||||| ||||| || || || ||||| |||||
Sbjct: 189 aggaaaggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaaggat 248
Query: 344 cagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggccag 403
| ||||| || || |||||||| || || |||||||| |||||||| || |||||
Sbjct: 249 ccaggaggttccagcaatgaaggttactgccctgaggttcaccgagacagcaagagccag 308
Query: 404 gatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccact 463
||| |||||||||| || ||||||||||| || |||||||| || |||||||| |||||
Sbjct: 309 gattgtcaatgctggtggggagtgcctcacatttgaccagcttgctctccgtgctccact 368
Query: 464 tgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcactt 523
||| | |||||||| || ||||||| || ||||| ||| | || || || ||||||||
Sbjct: 369 tggcgagaacacggtcctcttgaggggccccaagaatgctcgtgaggcggtgaggcactt 428
Query: 524 cgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggtag 583
|| || || || ||||| ||||||||||||||||| ||||| ||||| ||||| ||
Sbjct: 429 tggcaaggctcctggcgtgccgcacagccacaccaagccatatgtgcgctccaagggaag 488
Query: 584 gaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggt 631
|||||| || ||||| | || |||||||||||| | || ||||||||
Sbjct: 489 gaagttcgaaaaggctcgtggcaggaggaacagccgtggattcaaggt 536
>gb|AW922642.1|AW922642 DG1_46_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 268 bits (135), Expect = 8e-070
Identities = 407/497 (81%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 63 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 122
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 123 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 182
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 183 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 242
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 243 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 302
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 303 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 362
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 363 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 422
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 423 tgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctcttg 482
Query: 486 aggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcct 545
||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 483 aggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccg 542
Query: 546 cacagccacaccaagcc 562
|||||||||||||||||
Sbjct: 543 cacagccacaccaagcc 559
>gb|BF657231.1|BF657231 OV2_22_C06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 262 bits (132), Expect = 5e-068
Identities = 359/434 (82%), Gaps = 3/434 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 58 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 117
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 118 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 177
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 178 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 237
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 238 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 297
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 298 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 357
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 358 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 417
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctg 485
|||||||| || |||||||| || |||||||| |||||||| | |||||||| || ||
Sbjct: 418 tgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctcttg 477
Query: 486 aggggtcctaagaa 499
||||| || |||||
Sbjct: 478 aggggccccaagaa 491
>gb|BG649617.1|BG649617 RHIZ2_81_D03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 566
Score = 262 bits (132), Expect = 5e-068
Identities = 417/510 (81%), Gaps = 4/510 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 57 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 116
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 117 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 176
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 177 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 236
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 237 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 296
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 297 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 356
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctg-gcggaga 424
|| || || |||||||| |||||||| || |||||||| ||||||||| | || ||
Sbjct: 357 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctgagtgggga 416
Query: 425 gtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgct 484
||||||||| || |||||||| || |||||||| |||||||| | |||||||| || |
Sbjct: 417 gtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctctt 476
Query: 485 gaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcc 544
|||||| || ||||| ||| | || || || |||||||| || || || || |||||
Sbjct: 477 gaggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgcc 536
Query: 545 tcacagccacaccaagccttatgttcgctc 574
||||||||||||||||| ||||| |||||
Sbjct: 537 gcacagccacaccaagccatatgtgcgctc 566
>gb|BG357973.1|BG357973 OV2_32_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 468
Score = 260 bits (131), Expect = 2e-067
Identities = 334/401 (83%), Gaps = 3/401 (0%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 57 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 116
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 117 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 176
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 177 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 236
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag---atc 305
|| || | || |||||||||| |||| ||||||||| || |||| || || ||
Sbjct: 237 ccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaacatt 296
Query: 306 gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaag 365
|| |||||||| ||||| || || || ||||| |||||| ||||| || || ||||||
Sbjct: 297 gctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaag 356
Query: 366 gtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagag 425
|| || || |||||||| |||||||| || |||||||| |||||||||| || |||
Sbjct: 357 gttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggggag 416
Query: 426 tgcctcaccttcgaccagctcgcgctccgtgccccacttgg 466
|||||||| || |||||||| || |||||||| ||||||||
Sbjct: 417 tgcctcacatttgaccagcttgctctccgtgctccacttgg 457
>gb|CF482087.1|CF482087 POL1_76_B09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_76_B09_A002 5', mRNA sequence
Length = 482
Score = 260 bits (131), Expect = 2e-067
Identities = 230/263 (87%)
Strand = Plus / Minus
Query: 372 gcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctc 431
|||||||||||||||||||| || |||||| |||| | |||||||| || |||||||||
Sbjct: 442 gcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgcctc 383
Query: 432 accttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggt 491
||||| |||||||| ||||| |||||||| || || || ||||||||||||||||||||
Sbjct: 382 acctttgaccagcttgcgctgcgtgccccgctgggccagaacacggttctgctgagggga 323
Query: 492 cctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagc 551
|||||||| |||||||||||||| | |||||| || ||||| || || ||||| ||||||
Sbjct: 322 cctaagaatgctagggaagctgtgaagcactttggccctgcgcctggtgtgccccacagc 263
Query: 552 cacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggagg 611
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 262 cacacgaagccatacgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggagg 203
Query: 612 aacagcaggggcttcaaggtcta 634
|||||||| ||||||||||||||
Sbjct: 202 aacagcagaggcttcaaggtcta 180
>gb|CW170352.1|CW170352 104_580_11155162_116_36512_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155162, DNA
sequence
Length = 736
Score = 234 bits (118), Expect = 1e-059
Identities = 150/161 (93%)
Strand = Plus / Minus
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
|||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 625 ggttctcntgaggggtcctaagaacgctagggaagctgttaagcacttcggccctgcacc 566
Query: 536 aggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaa 595
||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 565 aggagtgccacacagccacaccaagccttacgttcgctcaaagggaaggaagtttgagaa 506
Query: 596 ggcgagaggaaggaggaacagcaggggcttcaaggtctaag 636
||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 505 ggcaagaggtaggaggaacagcaggggcttcaaggtctaag 465
>gb|AW287531.2|AW287531 LG1_242_C03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 365
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 61 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 120
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 121 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 180
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 181 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 240
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 241 ccaccaatttccctgcgccgccttgtcaagttcatgga 278
>gb|AW677175.1|AW677175 DG1_5_G07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 368
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 64 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 123
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 124 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 183
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 184 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 243
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 244 ccaccaatttccctgcgccgccttgtcaagttcatgga 281
>gb|AW923118.1|AW923118 DG1_49_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 383
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 56 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 115
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 116 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 175
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 176 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 235
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 236 ccaccaatttccctgcgccgccttgtcaagttcatgga 273
>gb|BE360510.1|BE360510 DG1_64_A12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 333
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 51 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 110
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 111 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 170
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 171 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 230
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 231 ccaccaatttccctgcgccgccttgtcaagttcatgga 268
>gb|BG463717.1|BG463717 EM1_51_B03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 371
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 67 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 126
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 127 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 186
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 187 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 246
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 247 ccaccaatttccctgcgccgccttgtcaagttcatgga 284
>gb|BG464969.1|BG464969 EM1_34_D09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 373
Score = 226 bits (114), Expect = 3e-057
Identities = 192/218 (88%)
Strand = Plus / Plus
Query: 69 gccatgggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgccc 128
|||||||||||||| ||||| ||||| || | |||||||||||||||||||| ||||||
Sbjct: 67 gccatgggtatcgacctcgtcgccggtgggaggaacaagaagaccaagcgcaccgcgccc 126
Query: 129 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgcttccttgtgcgcagg 188
|||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||
Sbjct: 127 aagtccgacgatgtctacctcaagctcctcgtcaagctctaccgtttcctggttaggagg 186
Query: 189 acaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaaccgc 248
|| ||||||||||||||||| || ||||||||| | |||||||||||||| |||||||||
Sbjct: 187 accaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaaccgc 246
Query: 249 ccgccgctctcgatgcgccgcctcgtcaggttcatgga 286
|| || | || |||||||||| |||| |||||||||
Sbjct: 247 ccaccaatttccctgcgccgccttgtcaagttcatgga 284
>gb|AW922809.1|AW922809 DG1_46_G01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 683
Score = 186 bits (94), Expect = 2e-045
Identities = 384/480 (80%), Gaps = 3/480 (0%)
Strand = Plus / Plus
Query: 155 cctcgtcaagctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgat 214
|||||||||||||||||| ||||| || | ||||| ||||||||||||||||| || ||
Sbjct: 1 cctcgtcaagctctaccgtttcctggttaggaggaccaagagcaacttcaacgctgtcat 60
Query: 215 cctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgt 274
||||||| | |||||||||||||| ||||||||||| || | || |||||||||| ||
Sbjct: 61 cctcaagaggctcttcatgagcaaaaccaaccgcccaccaatttccctgcgccgccttgt 120
Query: 275 caggttcatggaggggaagggtgatcag---atcgccgtgattgtgggcaccgtgaccga 331
|| ||||||||| || |||| || || || || |||||||| ||||| || || ||
Sbjct: 121 caagttcatggaaggaaaggaggagaagaacattgctgtgattgttggcacagtcacaga 180
Query: 332 cgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagac 391
||||| |||||| ||||| || || |||||||| || || |||||||| |||||
Sbjct: 181 tgacaaaaggatccaggaggttccagcaatgaaggttactgccctgaggttcaccgagac 240
Query: 392 agcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgct 451
||| || |||||||| |||||||||| || ||||||||||| || |||||||| || ||
Sbjct: 241 agcaagagccaggattgtcaatgctggtggggagtgcctcacatttgaccagcttgctct 300
Query: 452 ccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagc 511
|||||| |||||||| | |||||||| || ||||||| || ||||| ||| | || ||
Sbjct: 301 ccgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgctcgtgaggc 360
Query: 512 tgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcg 571
|| |||||||| || || || || ||||| ||||||||||||||||| ||||| ||
Sbjct: 361 ggtgaggcactttggcaaggctcctggcgtgccgcacagccacaccaagccatatgtgcg 420
Query: 572 ctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggt 631
||| ||||| |||||||| || ||||| | || |||||||||||| | || ||||||||
Sbjct: 421 ctccaagggaaggaagttcgaaaaggctcgtggcaggaggaacagccgtggattcaaggt 480
>gb|CX607486.1|CX607486 ANR1_29_B04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_B04_A002 3', mRNA sequence
Length = 687
Score = 176 bits (89), Expect = 2e-042
Identities = 379/475 (79%), Gaps = 3/475 (0%)
Strand = Plus / Plus
Query: 160 tcaagctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctca 219
||||||||||||| ||||| || | ||||| ||||||||||||||||| || |||||||
Sbjct: 1 tcaagctctaccgtttcctggttaggaggaccaagagcaacttcaacgctgtcatcctca 60
Query: 220 agcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggt 279
|| | |||||||||||||| ||||||||||| || | || |||||||||| |||| ||
Sbjct: 61 agaggctcttcatgagcaaaaccaaccgcccaccaatttccctgcgccgccttgtcaagt 120
Query: 280 tcatggaggggaagggtgatcag---atcgccgtgattgtgggcaccgtgaccgacgaca 336
||||||| || |||| || || || || |||||||| ||||| || || || ||||
Sbjct: 121 tcatggaaggaaaggaggagaagaacattgctgtgattgttggcacagtcacagatgaca 180
Query: 337 agaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcga 396
| |||||| ||||| || || |||||||| || || |||||||| |||||||| |
Sbjct: 181 aaaggatccaggaggttccagcaatgaaggttactgccctgaggttcaccgagacagcaa 240
Query: 397 gggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtg 456
| |||||||| |||||||||| || ||||||||||| || |||||||| || |||||||
Sbjct: 241 gagccaggattgtcaatgctggtggggagtgcctcacatttgaccagcttgctctccgtg 300
Query: 457 ccccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtca 516
| |||||||| | |||||||| || ||||||| || ||||| ||| | || || || |
Sbjct: 301 ctccacttggcgagaacacggtcctcttgaggggccccaagaatgctcgtgaggcggtga 360
Query: 517 ggcacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcga 576
||||||| || || || || ||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 361 ggcactttggcaaggctcctggcgtgccgcacagccacaccaagccatatgtgcgctcca 420
Query: 577 agggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggt 631
|||| |||||||| || ||||| | || |||||||||||| | || ||||||||
Sbjct: 421 agggaaggaagttcgaaaaggctcgtggcaggaggaacagccgtggattcaaggt 475
>gb|CW170353.1|CW170353 104_580_11155162_148_36511_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155162, DNA
sequence
Length = 614
Score = 174 bits (88), Expect = 9e-042
Identities = 118/128 (92%)
Strand = Plus / Plus
Query: 476 ggttctgctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcacc 535
|||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 487 ggttctcctgaggggtcctaagaacgctagggaagctgttaagcacttcggccctgcacc 546
Query: 536 aggagtgcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaa 595
||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 547 aggagtgccacacagccacaccaagccttacgttcgcttcaagggaaggaagtttgagaa 606
Query: 596 ggcgagag 603
||| ||||
Sbjct: 607 ggcaagag 614
>gb|BF656888.1|BF656888 OV2_22_C06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 567
Score = 165 bits (83), Expect = 9e-039
Identities = 358/449 (79%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 186 aggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaac 245
||||| ||||||||||||||||| || ||||||||| | |||||||||||||| ||||||
Sbjct: 3 aggaccaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaac 62
Query: 246 cgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag--- 302
||||| || | || |||||||||| |||| ||||||||| || |||| || ||
Sbjct: 63 cgcccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaac 122
Query: 303 atcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatg 362
|| || |||||||| ||||| || || || ||||| |||||| ||||| || || |||
Sbjct: 123 attgctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatg 182
Query: 363 aaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcgga 422
||||| || || |||||||| |||||||| || |||||||| |||||||||| ||
Sbjct: 183 aaggttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggg 242
Query: 423 gagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctg 482
||||||||||| || |||||||| || |||||||| |||||||| | |||||||| ||
Sbjct: 243 gagtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctc 302
Query: 483 ctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtg 542
||||||| || ||||| ||| | || || || |||||||| || || || || |||
Sbjct: 303 ttgaggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtg 362
Query: 543 cctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgaga 602
|| ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| |
Sbjct: 363 ccgcacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgt 422
Query: 603 ggaaggaggaacagcaggggcttcaaggt 631
|| |||||||||||| | || ||||||||
Sbjct: 423 ggcaggaggaacagccgtggattcaaggt 451
>gb|BG158183.1|BG158183 EM1_10_F10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 667
Score = 165 bits (83), Expect = 9e-039
Identities = 358/449 (79%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 186 aggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaac 245
||||| ||||||||||||||||| || ||||||||| | |||||||||||||| ||||||
Sbjct: 1 aggaccaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaac 60
Query: 246 cgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag--- 302
||||| || | || |||||||||| |||| ||||||||| || |||| || ||
Sbjct: 61 cgcccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaac 120
Query: 303 atcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatg 362
|| || |||||||| ||||| || || || ||||| |||||| ||||| || || |||
Sbjct: 121 attgctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatg 180
Query: 363 aaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcgga 422
||||| || || |||||||| |||||||| || |||||||| |||||||||| ||
Sbjct: 181 aaggttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggg 240
Query: 423 gagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctg 482
||||||||||| || |||||||| || |||||||| |||||||| | |||||||| ||
Sbjct: 241 gagtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctc 300
Query: 483 ctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtg 542
||||||| || ||||| ||| | || || || |||||||| || || || || |||
Sbjct: 301 ttgaggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtg 360
Query: 543 cctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgaga 602
|| ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| |
Sbjct: 361 ccgcacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgt 420
Query: 603 ggaaggaggaacagcaggggcttcaaggt 631
|| |||||||||||| | || ||||||||
Sbjct: 421 ggcaggaggaacagccgtggattcaaggt 449
>gb|BG605778.1|BG605778 RHIZ2_81_D03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 675
Score = 165 bits (83), Expect = 9e-039
Identities = 358/449 (79%), Gaps = 3/449 (0%)
Strand = Plus / Plus
Query: 186 aggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaac 245
||||| ||||||||||||||||| || ||||||||| | |||||||||||||| ||||||
Sbjct: 12 aggaccaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaac 71
Query: 246 cgcccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcag--- 302
||||| || | || |||||||||| |||| ||||||||| || |||| || ||
Sbjct: 72 cgcccaccaatttccctgcgccgccttgtcaagttcatggaaggaaaggaggagaagaac 131
Query: 303 atcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatg 362
|| || |||||||| ||||| || || || ||||| |||||| ||||| || || |||
Sbjct: 132 attgctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatg 191
Query: 363 aaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcgga 422
||||| || || |||||||| |||||||| || |||||||| |||||||||| ||
Sbjct: 192 aaggttactgccctgaggttcaccgagacagcaagagccaggattgtcaatgctggtggg 251
Query: 423 gagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttctg 482
||||||||||| || |||||||| || |||||||| |||||||| | |||||||| ||
Sbjct: 252 gagtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcctc 311
Query: 483 ctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagtg 542
||||||| || ||||| ||| | || || || |||||||| || || || || |||
Sbjct: 312 ttgaggggccccaagaatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtg 371
Query: 543 cctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgaga 602
|| ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| |
Sbjct: 372 ccgcacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgt 431
Query: 603 ggaaggaggaacagcaggggcttcaaggt 631
|| |||||||||||| | || ||||||||
Sbjct: 432 ggcaggaggaacagccgtggattcaaggt 460
>gb|CW091874.1|CW091874 104_454_10998818_114_33037_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998818, DNA
sequence
Length = 719
Score = 159 bits (80), Expect = 5e-037
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 163 agctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagc 222
|||| |||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 521 agctgtaccgcttccttgttcggaggaccaagagcaacttcaacgctgtgatcctgaagc 580
Query: 223 gcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttca 282
| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||
Sbjct: 581 ggctcttcatgagcaagaccaaccgcccgcctctctcgctccgccgcctcgtcaacttca 640
Query: 283 tggaggggaagg 294
||||||| ||||
Sbjct: 641 tggagggcaagg 652
Score = 141 bits (71), Expect = 1e-031
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 74 gggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagtc 133
||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 328 gggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaagtc 387
Query: 134 cgacgatgtctacctcaagctcctcgtcaag 164
|||||||||||||||||||||||||||||||
Sbjct: 388 cgacgatgtctacctcaagctcctcgtcaag 418
>gb|CW241511.1|CW241511 104_700_11218812_148_37541_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218812, DNA
sequence
Length = 670
Score = 159 bits (80), Expect = 5e-037
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 163 agctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagc 222
|||| |||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 373 agctgtaccgcttccttgttcggaggaccaagagcaacttcaacgctgtgatcctgaagc 314
Query: 223 gcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttca 282
| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||
Sbjct: 313 ggctcttcatgagcaagaccaaccgcccgcctctctcgctccgccgcctcgtcaacttca 254
Query: 283 tggaggggaagg 294
||||||| ||||
Sbjct: 253 tggagggcaagg 242
Score = 141 bits (71), Expect = 1e-031
Identities = 86/91 (94%)
Strand = Plus / Minus
Query: 74 gggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagtc 133
||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 566 gggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaagtc 507
Query: 134 cgacgatgtctacctcaagctcctcgtcaag 164
|||||||||||||||||||||||||||||||
Sbjct: 506 cgacgatgtctacctcaagctcctcgtcaag 476
Score = 103 bits (52), Expect = 3e-020
Identities = 124/148 (83%)
Strand = Plus / Minus
Query: 298 atcagatcgccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccgg 357
||||||| || ||||| |||||||||||||| |||||||||||| || ||||| || |
Sbjct: 151 atcagattgctgtgatagtgggcaccgtgactgacgacaagagggtctatgaggtaccag 92
Query: 358 cgatgaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctg 417
| |||||||| |||||||||||||||||||| || |||||| |||| | |||||||
Sbjct: 91 caatgaaggtggctgcgctcaggttcactgagacggccagggcccggattgtgaatgctg 32
Query: 418 gcggagagtgcctcaccttcgaccagct 445
| || |||||||||||||| ||||||||
Sbjct: 31 gtggcgagtgcctcacctttgaccagct 4
>gb|CW251503.1|CW251503 104_714_11223967_116_35068_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223967, DNA
sequence
Length = 608
Score = 159 bits (80), Expect = 5e-037
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 163 agctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagc 222
|||| |||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 24 agctgtaccgcttccttgttcggaggaccaagagcaacttcaacgctgtgatcctgaagc 83
Query: 223 gcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttca 282
| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||
Sbjct: 84 ggctcttcatgagcaagaccaaccgcccgcctctctcgctccgccgcctcgtcaacttca 143
Query: 283 tggaggggaagg 294
||||||| ||||
Sbjct: 144 tggagggcaagg 155
Score = 113 bits (57), Expect = 3e-023
Identities = 141/169 (83%)
Strand = Plus / Plus
Query: 309 gtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgatgaaggtc 368
||||| |||||||||||||| |||||||||||| || ||||| || || ||||||||
Sbjct: 257 gtgatagtgggcaccgtgactgacgacaagagggtctatgaggtaccagcaatgaaggtg 316
Query: 369 tgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgc 428
|||||||||||||||||||| || |||||| |||| | |||||||| || ||||||
Sbjct: 317 gctgcgctcaggttcactgagacggccagggcccggattgtgaatgctggtggcgagtgc 376
Query: 429 ctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacgg 477
|||||||| |||||||| ||||| |||||||| || || || |||||||
Sbjct: 377 ctcacctttgaccagcttgcgctgcgtgccccgctgggccagaacacgg 425
>gb|CC059618.1|CC059618 ii25e08.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii25e08, DNA sequence
Length = 508
Score = 151 bits (76), Expect = 1e-034
Identities = 94/100 (94%)
Strand = Plus / Minus
Query: 379 ggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcg 438
|||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 508 ggttcactgagacagctagggccaggatcatcaatgccggtggagagtgcctcaccttcg 449
Query: 439 accagctcgcgctccgtgccccacttgggcaaaacacggt 478
||||||| |||||||||||||| || ||||||||||||||
Sbjct: 448 accagcttgcgctccgtgccccgctcgggcaaaacacggt 409
>gb|CW420290.1|CW420290 fsbb001f126i19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f126i19, DNA
sequence
Length = 601
Score = 151 bits (76), Expect = 1e-034
Identities = 115/128 (89%)
Strand = Plus / Plus
Query: 163 agctctaccgcttccttgtgcgcaggacaaagagcaacttcaacgccgtgatcctcaagc 222
|||| |||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||
Sbjct: 450 agctgtaccgcttccttgttcggaggaccaagagcaacttcaacgctgtgatcctgaagc 509
Query: 223 gcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttca 282
| ||||||||||||||||||||||||||||| |||||| | ||||| ||||||| ||||
Sbjct: 510 ggctcttcatgagcaagaccaaccgcccgcctctctcgctccgccggctcgtcaacttca 569
Query: 283 tggagggg 290
||||||||
Sbjct: 570 tggagggg 577
Score = 141 bits (71), Expect = 1e-031
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 74 gggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagtc 133
||||||||| || || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 257 gggtatcgacctagtcgccggcggccggaacaagaagaccaagcgcaccgcgcccaagtc 316
Query: 134 cgacgatgtctacctcaagctcctcgtcaag 164
|||||||||||||||||||||||||||||||
Sbjct: 317 cgacgatgtctacctcaagctcctcgtcaag 347
>gb|BQ655955.1|BQ655955 pRC0147 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0147, mRNA sequence
Length = 637
Score = 151 bits (76), Expect = 1e-034
Identities = 336/422 (79%), Gaps = 3/422 (0%)
Strand = Plus / Plus
Query: 213 atcctcaagcgcctcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctc 272
||||||||| | |||||||||||||| ||||||||||| || | || ||||||||||
Sbjct: 1 atcctcaagaggctcttcatgagcaaaaccaaccgcccaccaatttccctgcgccgcctt 60
Query: 273 gtcaggttcatggaggggaagggtgatcagatc---gccgtgattgtgggcaccgtgacc 329
|||| ||||||||| || |||| || ||| | || |||||||| ||||| || ||
Sbjct: 61 gtcaagttcatggaaggaaaggaggagaagaacattgctgtgattgttggcacagtcaca 120
Query: 330 gacgacaagaggatcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgag 389
|| |||||||||||| ||||| || || |||||||| || || |||||||| |||
Sbjct: 121 gatgacaagaggatccaggaggttccagcaatgaaggttactgccctgaggttcaccgag 180
Query: 390 acagcgagggccaggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcg 449
||||| |||||||| || |||||||||| || ||||||||||| || |||||||| ||
Sbjct: 181 acagcaagggccagaattgtcaatgctggtggggagtgcctcacatttgaccagcttgct 240
Query: 450 ctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaa 509
|||||||| |||||||| | |||||||| || ||||||| || ||||| ||| | ||
Sbjct: 241 ctccgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgctcgtgag 300
Query: 510 gctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagccttatgtt 569
|| || |||||||| || || || || ||||| ||||||||||||||||| |||||
Sbjct: 301 gcggtgaggcactttggcaaggctcctggcgtgccgcacagccacaccaagccatatgtg 360
Query: 570 cgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaag 629
||||| ||||| |||||||| |||||||| | || |||||||||||| | || ||||||
Sbjct: 361 cgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaag 420
Query: 630 gt 631
||
Sbjct: 421 gt 422
>gb|CF480856.1|CF480856 POL1_68_H06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_68_H06_A002 3', mRNA sequence
Length = 680
Score = 143 bits (72), Expect = 3e-032
Identities = 357/450 (79%), Gaps = 4/450 (0%)
Strand = Plus / Plus
Query: 186 aggacaaagagcaacttcaacgccgtgatcctcaagcgcctcttcatgagcaagaccaac 245
||||| ||||||||||||||||| || ||||||||| | |||||||||||||| ||||||
Sbjct: 16 aggaccaagagcaacttcaacgctgtcatcctcaagaggctcttcatgagcaaaaccaac 75
Query: 246 cgc-ccgccgctctcgatgcgccgcctcgtcaggttcatggaggggaagggtgatcagat 304
||| || || | || |||||||||| |||| ||||||||| || |||| || |||
Sbjct: 76 cgccccaccaatttccgtgcgccgccttgtcaagttcatggaaggaaaggaggagaagaa 135
Query: 305 c---gccgtgattgtgggcaccgtgaccgacgacaagaggatcagcgaggtgccggcgat 361
| || |||||||| ||||| || || || ||||| |||||| ||||| || || ||
Sbjct: 136 cattgctgtgattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaat 195
Query: 362 gaaggtctgcgcgctcaggttcactgagacagcgagggccaggatcatcaatgctggcgg 421
|||||| || || |||||||| | |||||| || |||||||| |||||||||| ||
Sbjct: 196 gaaggttactgccctgaggttcaccgggacagcaagagccaggattgtcaatgctggtgg 255
Query: 422 agagtgcctcaccttcgaccagctcgcgctccgtgccccacttgggcaaaacacggttct 481
||||||||||| || |||||||| || |||||||| |||||||| | |||||||| ||
Sbjct: 256 ggagtgcctcacatttgaccagcttgctctccgtgctccacttggcgagaacacggtcct 315
Query: 482 gctgaggggtcctaagaacgctagggaagctgtcaggcacttcgggcctgcaccaggagt 541
||||||| || ||||| ||| | || || || |||||||| || || || || ||
Sbjct: 316 cttgaggggccccaagaatgctcgtgaggcggtgaggcactttggcatggctcctggcgt 375
Query: 542 gcctcacagccacaccaagccttatgttcgctcgaagggtaggaagtttgagaaggcgag 601
||| ||||||||||||||||| ||||| ||||| ||||| |||||||| || ||||| |
Sbjct: 376 gccgcacagccacaccaagccatatgtgcgctccaagggaaggaagttcgaaaaggctcg 435
Query: 602 aggaaggaggaacagcaggggcttcaaggt 631
|| |||||||||||| | || ||||||||
Sbjct: 436 tggcaggaggaacagccgtggattcaaggt 465
>gb|BZ781233.1|BZ781233 ii25e08.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii25e08, DNA sequence
Length = 593
Score = 137 bits (69), Expect = 2e-030
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 74 gggtatcgatctcgtagccggcggccgcaacaagaagaccaagcgcacggcgcccaagtc 133
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gggtatcgacctcgtcgccggcggccgcaacaagaagaccaagcgcacggcgcccaagtc 572
Query: 134 cgacgatgtctacctcaagct 154
|||||||||||| ||||||||
Sbjct: 573 cgacgatgtctatctcaagct 593
>gb|BM317742.1|BM317742 WS1_64_H09.b9_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 375
Score = 131 bits (66), Expect = 1e-028
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 505 gggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcctt 564
|||||||||| | |||||| || ||||| || || ||||| ||||||||||| ||||| |
Sbjct: 9 gggaagctgtgaagcactttggccctgcgcctggtgtgccccacagccacacgaagccat 68
Query: 565 atgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggct 624
| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 69 acgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggaggaacagcagaggct 128
Query: 625 tcaaggtcta 634
||||||||||
Sbjct: 129 tcaaggtcta 138
>gb|AW679772.1|AW679772 WS1_31_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 125 bits (63), Expect = 7e-027
Identities = 323/409 (78%), Gaps = 3/409 (0%)
Strand = Plus / Plus
Query: 226 tcttcatgagcaagaccaaccgcccgccgctctcgatgcgccgcctcgtcaggttcatgg 285
||||||||||||| ||||||||||| || | || |||||||||| |||| ||||||||
Sbjct: 1 tcttcatgagcaaaaccaaccgcccaccaatttccctgcgccgccttgtcaagttcatgg 60
Query: 286 aggggaagggtgatcagatc---gccgtgattgtgggcaccgtgaccgacgacaagagga 342
| || |||| || ||| | || |||||||| ||||| || || || ||||| ||||
Sbjct: 61 aaggaaaggaggagaagaacattgctgtgattgttggcacagtcacagatgacaaaagga 120
Query: 343 tcagcgaggtgccggcgatgaaggtctgcgcgctcaggttcactgagacagcgagggcca 402
|| ||||| || || |||||||| || || |||||||| |||||||| || ||||
Sbjct: 121 tccaggaggttccagcaatgaaggttactgccctgaggttcaccgagacagcaagagcca 180
Query: 403 ggatcatcaatgctggcggagagtgcctcaccttcgaccagctcgcgctccgtgccccac 462
|||| |||||||||| || ||||||||||| || |||||||| || |||||||| ||||
Sbjct: 181 ggattgtcaatgctggtggggagtgcctcacatttgaccagcttgctctccgtgctccac 240
Query: 463 ttgggcaaaacacggttctgctgaggggtcctaagaacgctagggaagctgtcaggcact 522
|||| | |||||||| || ||||||| || ||||| ||| | || || || |||||||
Sbjct: 241 ttggcgagaacacggtcctcttgaggggccccaagaatgctcgtgaggcggtgaggcact 300
Query: 523 tcgggcctgcaccaggagtgcctcacagccacaccaagccttatgttcgctcgaagggta 582
| || || || || ||||| ||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 301 ttggcaaggctcctggcgtgccgcacagccacaccaagccatatgtgcgctccaagggaa 360
Query: 583 ggaagtttgagaaggcgagaggaaggaggaacagcaggggcttcaaggt 631
||||||| || ||||| | || |||||||||||| | || ||||||||
Sbjct: 361 ggaagttcgaaaaggctcgtggcaggaggaacagccgtggattcaaggt 409
>gb|BE363639.1|BE363639 WS1_64_H09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 141
Score = 125 bits (63), Expect = 7e-027
Identities = 111/127 (87%)
Strand = Plus / Plus
Query: 505 gggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacaccaagcctt 564
|||||||||| | |||||| || ||||| || || ||||| ||||||||||| ||||| |
Sbjct: 9 gggaagctgtgaagcactttggccctgcgcctggtgtgccccacagccacacgaagccat 68
Query: 565 atgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagcaggggct 624
| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 69 acgtgcgctccaagggcaggaagtttgagaaggcaagaggaaggaggaacagcagaggct 128
Query: 625 tcaaggt 631
|||||||
Sbjct: 129 tcaaggt 135
>gb|BE353117.1|BE353117 DG1_4_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 413
Score = 123 bits (62), Expect = 3e-026
Identities = 206/254 (81%)
Strand = Plus / Plus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
|||||||| |||||||| || |||||||| |||||||||| || ||||||||||| ||
Sbjct: 52 aggttcaccgagacagcaagagccaggattgtcaatgctggtggggagtgcctcacattt 111
Query: 438 gaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaag 497
|||||||| || |||||||| |||||||| | |||||||| || ||||||| || |||
Sbjct: 112 gaccagcttgctctccgtgctccacttggcgagaacacggtcctcttgaggggccccaag 171
Query: 498 aacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacacc 557
|| ||| | || || || |||||||| || || || || ||||| ||||||||||||
Sbjct: 172 aatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccgcacagccacacc 231
Query: 558 aagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagc 617
||||| ||||| ||||| ||||| |||||||| || ||||| | || ||||||||||||
Sbjct: 232 aagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtggcaggaggaacagc 291
Query: 618 aggggcttcaaggt 631
| || ||||||||
Sbjct: 292 cgtggattcaaggt 305
>gb|BE593290.1|BE593290 WS1_100_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 123 bits (62), Expect = 3e-026
Identities = 206/254 (81%)
Strand = Plus / Plus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
|||||||| |||||||| || |||||||| |||||||||| || ||||||||||| ||
Sbjct: 88 aggttcaccgagacagcaagagccaggattgtcaatgctggtggggagtgcctcacattt 147
Query: 438 gaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaag 497
|||||||| || |||||||| |||||||| | |||||||| || ||||||| || |||
Sbjct: 148 gaccagcttgctctccgtgctccacttggcgagaacacggtcctcttgaggggccccaag 207
Query: 498 aacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacacc 557
|| ||| | || || || |||||||| || || || || ||||| ||||||||||||
Sbjct: 208 aatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccgcacagccacacc 267
Query: 558 aagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagc 617
||||| ||||| ||||| ||||| |||||||| || ||||| | || ||||||||||||
Sbjct: 268 aagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtggcaggaggaacagc 327
Query: 618 aggggcttcaaggt 631
| || ||||||||
Sbjct: 328 cgtggattcaaggt 341
>gb|BG357653.1|BG357653 OV2_32_F03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 123 bits (62), Expect = 3e-026
Identities = 206/254 (81%)
Strand = Plus / Plus
Query: 378 aggttcactgagacagcgagggccaggatcatcaatgctggcggagagtgcctcaccttc 437
|||||||| |||||||| || |||||||| |||||||||| || ||||||||||| ||
Sbjct: 145 aggttcaccgagacagcaagagccaggattgtcaatgctggtggggagtgcctcacattt 204
Query: 438 gaccagctcgcgctccgtgccccacttgggcaaaacacggttctgctgaggggtcctaag 497
|||||||| || |||||||| |||||||| | |||||||| || ||||||| || |||
Sbjct: 205 gaccagcttgctctccgtgctccacttggcgagaacacggtcctcttgaggggccccaag 264
Query: 498 aacgctagggaagctgtcaggcacttcgggcctgcaccaggagtgcctcacagccacacc 557
|| ||| | || || || |||||||| || || || || ||||| ||||||||||||
Sbjct: 265 aatgctcgtgaggcggtgaggcactttggcaaggctcctggcgtgccgcacagccacacc 324
Query: 558 aagccttatgttcgctcgaagggtaggaagtttgagaaggcgagaggaaggaggaacagc 617
||||| ||||| ||||| ||||| |||||||| || ||||| | || ||||||||||||
Sbjct: 325 aagccatatgtgcgctccaagggaaggaagttcgaaaaggctcgtggcaggaggaacagc 384
Query: 618 aggggcttcaaggt 631
| || ||||||||
Sbjct: 385 cgtggattcaaggt 398
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 220,772
Number of Sequences: 832831
Number of extensions: 220772
Number of successful extensions: 61434
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61241
Number of HSP's gapped (non-prelim): 178
length of query: 877
length of database: 491,359,669
effective HSP length: 20
effective length of query: 857
effective length of database: 474,703,049
effective search space: 406820512993
effective search space used: 406820512993
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)