BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE598726.1|BE598726 PI1_81_A12.b1_A002 Pathogen induced ... 910 0.0
gb|CX612233.1|CX612233 GABR1_1_F11.b1_A002 GA- or brassinol... 866 0.0
gb|AW564373.1|AW564373 LG1_290_H10.b1_A002 Light Grown 1 (L... 862 0.0
gb|BG947739.1|BG947739 IP1_8_E06.g1_A002 Immature pannicle ... 848 0.0
gb|BE358947.1|BE358947 DG1_37_C03.b1_A002 Dark Grown 1 (DG1... 815 0.0
gb|BE598394.1|BE598394 PI1_81_A12.g1_A002 Pathogen induced ... 803 0.0
gb|BM326925.1|BM326925 PIC1_4_G12.g1_A002 Pathogen-infected... 791 0.0
gb|CX612323.1|CX612323 GABR1_1_F11.g1_A002 GA- or brassinol... 753 0.0
gb|AW923940.1|AW923940 WS1_31_D05.b1_A002 Water-stressed 1 ... 722 0.0
gb|BM328668.1|BM328668 PIC1_25_A12.g1_A002 Pathogen-infecte... 692 0.0
gb|BG103143.1|BG103143 RHIZ2_18_F09.g1_A003 Rhizome2 (RHIZ2... 628 e-178
gb|BE358837.1|BE358837 DG1_32_C04.g1_A002 Dark Grown 1 (DG1... 615 e-174
gb|BE358980.1|BE358980 DG1_37_C03.g1_A002 Dark Grown 1 (DG1... 587 e-165
gb|BE356139.1|BE356139 DG1_122_E02.g1_A002 Dark Grown 1 (DG... 561 e-158
gb|CB929269.1|CB929269 ABA1_41_B05.b1_A012 Abscisic acid-tr... 513 e-143
gb|CW435928.1|CW435928 fsbb001f152f01k0 Sorghum methylation... 454 e-125
gb|BG933568.1|BG933568 WS1_4_H09.b1_A002 Water-stressed 1 (... 444 e-122
gb|AW680120.1|AW680120 WS1_4_H09.g1_A002 Water-stressed 1 (... 442 e-122
gb|BG052710.1|BG052710 RHIZ2_28_G06.g1_A003 Rhizome2 (RHIZ2... 442 e-122
gb|BG559870.1|BG559870 RHIZ2_74_F04.g1_A003 Rhizome2 (RHIZ2... 442 e-122
gb|BM328675.1|BM328675 PIC1_25_B12.g1_A002 Pathogen-infecte... 426 e-117
gb|CN128193.1|CN128193 RHOH1_27_E03.g1_A002 Acid- and alkal... 400 e-109
gb|CW065183.1|CW065183 104_311_10522997_115_30121 Sorghum m... 398 e-109
gb|BG948032.1|BG948032 IP1_8_E06.b1_A002 Immature pannicle ... 371 e-100
gb|BM330970.1|BM330970 PIC1_67_H03.g1_A002 Pathogen-infecte... 367 2e-099
gb|AW922728.1|AW922728 DG1_45_A08.g1_A002 Dark Grown 1 (DG1... 339 4e-091
gb|CF426874.1|CF426874 PH1_2_E09.b1_A002 Phosphorous-defici... 325 7e-087
gb|BG047632.1|BG047632 OV1_26_C08.b1_A002 Ovary 1 (OV1) Sor... 321 1e-085
gb|CF772893.1|CF772893 DSBF1_40_F07.g1_A010 Drought-stresse... 315 6e-084
gb|BG103104.1|BG103104 RHIZ2_18_C01.g1_A003 Rhizome2 (RHIZ2... 311 1e-082
gb|CX623197.1|CX623197 GABR1_68_F11.b1_A002 GA- or brassino... 293 2e-077
gb|BM322440.1|BM322440 PIC1_4_G12.b1_A002 Pathogen-infected... 270 3e-070
gb|CN128125.1|CN128125 RHOH1_27_E03.b1_A002 Acid- and alkal... 270 3e-070
gb|CX611045.1|CX611045 ANR1_22_G07.b1_A002 Anaerobic roots ... 266 5e-069
gb|CW069120.1|CW069120 104_318_10525655_1_30095 Sorghum met... 208 1e-051
gb|AW282755.1|AW282755 LG1_290_H10.g1_A002 Light Grown 1 (L... 200 3e-049
gb|AI724163.1|AI724163 RHIZ1_7_G05.y2_A001 Rhizome1 (RHIZ1)... 192 6e-047
gb|CW195601.1|CW195601 104_619_11180724_116_36808_044 Sorgh... 174 2e-041
gb|CX622843.1|CX622843 GABR1_66_G03.b1_A002 GA- or brassino... 170 2e-040
gb|BZ337599.1|BZ337599 ia89f08.g1 WGS-SbicolorF (JM107 adap... 165 1e-038
gb|CW341966.1|CW341966 104_843_11486613_116_36157_085 Sorgh... 165 1e-038
gb|BG047988.1|BG047988 OV1_26_C08.g1_A002 Ovary 1 (OV1) Sor... 155 1e-035
gb|CW155314.1|CW155314 104_557_11146073_148_36360_067 Sorgh... 129 8e-028
gb|CW177065.1|CW177065 104_590_11158824_116_36593_092 Sorgh... 129 8e-028
gb|CW195602.1|CW195602 104_619_11180724_148_36804_044 Sorgh... 129 8e-028
gb|CD424899.1|CD424899 SA1_9_C07.b1_A002 Salicylic acid-tre... 129 8e-028
gb|CN125323.1|CN125323 RHOH1_10_H10.b1_A002 Acid- and alkal... 129 8e-028
gb|CN149962.1|CN149962 WOUND1_66_B07.b1_A002 Wounded leaves... 129 8e-028
gb|CW341967.1|CW341967 104_843_11486613_148_36158_085 Sorgh... 127 3e-027
gb|CW252976.1|CW252976 104_716_11224822_116_35103_089 Sorgh... 125 1e-026
gb|BM330485.1|BM330485 PIC1_52_F06.g1_A002 Pathogen-infecte... 119 8e-025
gb|BM324178.1|BM324178 PIC1_25_A12.b1_A002 Pathogen-infecte... 117 3e-024
gb|CX615688.1|CX615688 GABR1_22_A05.b1_A002 GA- or brassino... 115 1e-023
gb|BI098163.1|BI098163 IP1_32_H07.g1_A002 Immature pannicle... 113 5e-023
gb|CD225257.1|CD225257 CCC1_39_H04.b1_A007 Callus culture/c... 107 3e-021
gb|CF485564.1|CF485564 POL1_32_G02.b1_A002 Pollen Sorghum b... 107 3e-021
gb|CX607990.1|CX607990 ANR1_32_A09.b1_A002 Anaerobic roots ... 107 3e-021
gb|CX610151.1|CX610151 ANR1_17_A01.b1_A002 Anaerobic roots ... 107 3e-021
gb|CW302720.1|CW302720 104_787_11464865_148_35670_079 Sorgh... 100 7e-019
gb|CN127153.1|CN127153 RHOH1_21_H01.b1_A002 Acid- and alkal... 100 7e-019
gb|BE592429.1|BE592429 WS1_94_F06.g1_A002 Water-stressed 1 ... 98 3e-018
gb|BG464726.1|BG464726 EM1_33_C05.g1_A002 Embryo 1 (EM1) So... 98 3e-018
gb|BG103207.1|BG103207 RHIZ2_19_E05.g1_A003 Rhizome2 (RHIZ2... 96 1e-017
gb|CW045199.1|CW045199 104_281_10509415_114_30238 Sorghum m... 94 4e-017
gb|BI098154.1|BI098154 IP1_32_G07.g1_A002 Immature pannicle... 92 2e-016
gb|CW264923.1|CW264923 104_734_11231578_116_35258_047 Sorgh... 90 7e-016
gb|CN125411.1|CN125411 RHOH1_10_H10.g1_A002 Acid- and alkal... 88 3e-015
gb|BZ349935.1|BZ349935 hr47e03.g1 WGS-SbicolorF (JM107 adap... 84 4e-014
gb|CW241292.1|CW241292 104_700_11218687_116_37545_026 Sorgh... 82 2e-013
gb|CW241293.1|CW241293 104_700_11218687_148_37542_026 Sorgh... 82 2e-013
gb|CD213228.1|CD213228 HS1_29_A02.b1_A012 Heat-shocked seed... 80 7e-013
gb|CL176063.1|CL176063 104_382_10892872_116_31763_088 Sorgh... 78 3e-012
gb|CW141686.1|CW141686 104_532_11136444_148_34929_036 Sorgh... 78 3e-012
gb|AW672136.1|AW672136 LG1_357_D04.b1_A002 Light Grown 1 (L... 66 1e-008
gb|BG050791.1|BG050791 FM1_70_F06.b1_A003 Floral-Induced Me... 66 1e-008
gb|BG239908.1|BG239908 OV1_30_E11.g1_A002 Ovary 1 (OV1) Sor... 66 1e-008
gb|BG322453.1|BG322453 EM1_28_B08.b1_A002 Embryo 1 (EM1) So... 66 1e-008
gb|BI098408.1|BI098408 IP1_32_A01.b1_A002 Immature pannicle... 66 1e-008
gb|BI211916.1|BI211916 IP1_62_A09.b1_A002 Immature pannicle... 66 1e-008
gb|BI245833.1|BI245833 IP1_64_A10.b1_A002 Immature pannicle... 66 1e-008
gb|CD231000.1|CD231000 SS1_7_A08.g1_A012 Salt-stressed seed... 66 1e-008
gb|CD231740.1|CD231740 SS1_23_B08.g1_A012 Salt-stressed see... 66 1e-008
gb|CD231767.1|CD231767 SS1_23_F08.g1_A012 Salt-stressed see... 66 1e-008
gb|CF427742.1|CF427742 PH1_10_E03.g1_A002 Phosphorous-defic... 66 1e-008
gb|CF430354.1|CF430354 PH1_27_G09.g1_A002 Phosphorous-defic... 66 1e-008
gb|CF430487.1|CF430487 PH1_28_A03.g1_A002 Phosphorous-defic... 66 1e-008
gb|CF432706.1|CF432706 NIT1_18_B01.g1_A002 Nitrogen-deficie... 66 1e-008
gb|CF433668.1|CF433668 NIT1_28_C11.g1_A002 Nitrogen-deficie... 66 1e-008
gb|CF433901.1|CF433901 NIT1_30_D07.g1_A002 Nitrogen-deficie... 66 1e-008
gb|CF434004.1|CF434004 NIT1_31_D06.g1_A002 Nitrogen-deficie... 66 1e-008
gb|CF755793.1|CF755793 DSAF1_1_H08.b1_A011 Drought-stressed... 66 1e-008
gb|CN125876.1|CN125876 RHOH1_13_H02.g1_A002 Acid- and alkal... 66 1e-008
gb|CN128624.1|CN128624 RHOH1_30_D09.g1_A002 Acid- and alkal... 66 1e-008
gb|CN141132.1|CN141132 OX1_49_B06.g1_A002 Oxidatively-stres... 66 1e-008
gb|CX611949.1|CX611949 ANR1_27_D08.g1_A002 Anaerobic roots ... 66 1e-008
gb|CX615385.1|CX615385 GABR1_19_G09.g1_A002 GA- or brassino... 66 1e-008
gb|CX615535.1|CX615535 GABR1_20_E09.g1_A002 GA- or brassino... 66 1e-008
gb|CX618964.1|CX618964 GABR1_42_E12.g1_A002 GA- or brassino... 66 1e-008
gb|CX622038.1|CX622038 GABR1_61_D10.g2_A002 GA- or brassino... 66 1e-008
gb|BE592553.1|BE592553 WS1_94_F06.b1_A002 Water-stressed 1 ... 64 4e-008
gb|CF771082.1|CF771082 DSBF1_13_F08.g1_A010 Drought-stresse... 64 4e-008
gb|CW141685.1|CW141685 104_532_11136444_116_34933_036 Sorgh... 60 6e-007
gb|CW251424.1|CW251424 104_714_11223922_116_35069_047 Sorgh... 60 6e-007
gb|CX606371.1|CX606371 ANR1_2_D11.g1_A002 Anaerobic roots S... 60 6e-007
gb|CD222221.1|CD222221 CCC1_2_E05.g1_A007 Callus culture/ce... 58 2e-006
gb|CF430476.1|CF430476 PH1_28_D01.g1_A002 Phosphorous-defic... 58 2e-006
gb|CX607777.1|CX607777 ANR1_30_E03.g1_A002 Anaerobic roots ... 58 2e-006
gb|BZ332079.1|BZ332079 hx25c04.b1 WGS-SbicolorF (JM107 adap... 56 1e-005
gb|CD232602.1|CD232602 SS1_46_E09.g1_A012 Salt-stressed see... 50 6e-004
gb|CD429345.1|CD429345 ETH1_4_B06.b1_A002 Ethylene-treated ... 48 0.002
gb|CX623284.1|CX623284 GABR1_68_F11.g1_A002 GA- or brassino... 46 0.009
gb|CW264924.1|CW264924 104_734_11231578_148_35262_047 Sorgh... 44 0.037
gb|CW293212.1|CW293212 104_773_11414527_116_35587_022 Sorgh... 44 0.037
gb|BE360625.1|BE360625 DG1_64_F10.g1_A002 Dark Grown 1 (DG1... 44 0.037
gb|BE597954.1|BE597954 PI1_67_E07.g1_A002 Pathogen induced ... 44 0.037
gb|BG048443.1|BG048443 OV1_13_D12.g1_A002 Ovary 1 (OV1) Sor... 44 0.037
gb|BG101912.1|BG101912 RHIZ2_21_D05.g1_A003 Rhizome2 (RHIZ2... 44 0.037
gb|BG355671.1|BG355671 EM1_16_F10.g1_A002 Embryo 1 (EM1) So... 44 0.037
gb|BG410969.1|BG410969 EM1_28_B08.g1_A002 Embryo 1 (EM1) So... 44 0.037
gb|BG557917.1|BG557917 EM1_39_B11.g1_A002 Embryo 1 (EM1) So... 44 0.037
gb|CD230979.1|CD230979 SS1_7_A08.b1_A012 Salt-stressed seed... 44 0.037
gb|CD231720.1|CD231720 SS1_23_B08.b1_A012 Salt-stressed see... 44 0.037
gb|CD231960.1|CD231960 SS1_31_G04.b1_A012 Salt-stressed see... 44 0.037
gb|CD235212.1|CD235212 SS1_28_D12.b1_A012 Salt-stressed see... 44 0.037
gb|CF071290.1|CF071290 FE1_16_D06.g1_A002 Iron-deficient se... 44 0.037
gb|CF429793.1|CF429793 PH1_24_F01.b1_A002 Phosphorous-defic... 44 0.037
gb|CF430220.1|CF430220 PH1_27_G09.b1_A002 Phosphorous-defic... 44 0.037
gb|CF433612.1|CF433612 NIT1_28_C11.b1_A002 Nitrogen-deficie... 44 0.037
gb|CF433976.1|CF433976 NIT1_31_D06.b1_A002 Nitrogen-deficie... 44 0.037
gb|CN141047.1|CN141047 OX1_49_B06.b1_A002 Oxidatively-stres... 44 0.037
gb|CX611862.1|CX611862 ANR1_27_D08.b1_A002 Anaerobic roots ... 44 0.037
gb|CX615302.1|CX615302 GABR1_19_G09.b1_A002 GA- or brassino... 44 0.037
gb|CX615450.1|CX615450 GABR1_20_E09.b1_A002 GA- or brassino... 44 0.037
gb|CX618883.1|CX618883 GABR1_42_E12.b1_A002 GA- or brassino... 44 0.037
gb|CX622936.1|CX622936 GABR1_66_G03.g1_A002 GA- or brassino... 42 0.14
gb|AW679739.1|AW679739 WS1_31_D05.g1_A002 Water-stressed 1 ... 40 0.57
gb|CW110695.1|CW110695 104_483_11103860_116_34518_070 Sorgh... 38 2.3
gb|CW163651.1|CW163651 104_571_11151575_116_36453_090 Sorgh... 38 2.3
gb|CW233441.1|CW233441 104_686_11213425_116_37369_003 Sorgh... 38 2.3
gb|CW261484.1|CW261484 104_728_11229536_148_35173_022 Sorgh... 38 2.3
gb|CW293213.1|CW293213 104_773_11414527_148_35591_022 Sorgh... 38 2.3
gb|CW296776.1|CW296776 104_778_11461695_148_35632_052 Sorgh... 38 2.3
gb|CW327338.1|CW327338 104_823_11478693_116_35975_095 Sorgh... 38 2.3
gb|CW395426.1|CW395426 fsbb001f083h07f0 Sorghum methylation... 38 2.3
gb|CW411599.1|CW411599 fsbb001f106n12k0 Sorghum methylation... 38 2.3
gb|BG050630.1|BG050630 FM1_70_F06.g1_A003 Floral-Induced Me... 38 2.3
gb|CF432658.1|CF432658 NIT1_18_B01.b1_A002 Nitrogen-deficie... 38 2.3
gb|CX607692.1|CX607692 ANR1_30_E03.b1_A002 Anaerobic roots ... 38 2.3
gb|CL163003.1|CL163003 104_355_10806822_114_31832_342 Sorgh... 36 8.9
gb|CL163004.1|CL163004 104_355_10806822_116_31833_342 Sorgh... 36 8.9
gb|CW026749.1|CW026749 104_253_10498126_114_30531 Sorghum m... 36 8.9
gb|CW118685.1|CW118685 104_495_11108343_148_34700_060 Sorgh... 36 8.9
gb|CW135742.1|CW135742 104_520_11118008_148_34833_024 Sorgh... 36 8.9
gb|CW137557.1|CW137557 104_525_11119735_116_34876_032 Sorgh... 36 8.9
gb|CW161472.1|CW161472 104_568_11150433_116_36433_041 Sorgh... 36 8.9
gb|CW168998.1|CW168998 104_578_11154443_116_36599_034 Sorgh... 36 8.9
gb|CW274744.1|CW274744 104_747_11404590_148_35373_019 Sorgh... 36 8.9
gb|CW324460.1|CW324460 104_819_11477175_116_35916_064 Sorgh... 36 8.9
gb|CW324461.1|CW324461 104_819_11477175_148_35912_064 Sorgh... 36 8.9
gb|CW394711.1|CW394711 fsbb001f082h02f0 Sorghum methylation... 36 8.9
gb|CW394712.1|CW394712 fsbb001f082h02k0 Sorghum methylation... 36 8.9
gb|CW399450.1|CW399450 fsbb001f089e19f0 Sorghum methylation... 36 8.9
gb|CW399451.1|CW399451 fsbb001f089e19k0 Sorghum methylation... 36 8.9
gb|CW450384.1|CW450384 fsbb001f188p23f0 Sorghum methylation... 36 8.9
gb|CW461978.1|CW461978 fsbb001f209o07f0 Sorghum methylation... 36 8.9
gb|CW492193.1|CW492193 fsbb001f282g01f0 Sorghum methylation... 36 8.9
gb|BF586115.1|BF586115 FM1_26_H03.g1_A003 Floral-Induced Me... 36 8.9
gb|CN150172.1|CN150172 WOUND1_67_A06.g1_A002 Wounded leaves... 36 8.9
>gb|BE598726.1|BE598726 PI1_81_A12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 910 bits (459), Expect = 0.0
Identities = 504/519 (97%)
Strand = Plus / Minus
Query: 465 cgggcttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttgg 524
|||||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||
Sbjct: 527 cgggcttgcgcttgtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattgg 468
Query: 525 ggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttac 584
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 467 ggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccggggttac 408
Query: 585 ccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagat 644
||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccaggttgaatggtcctacatggtcgccttccatcagcttcatcagaccctcaaccagat 348
Query: 645 cagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcct 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcct 288
Query: 705 tcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgag 764
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcctcagagcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgag 228
Query: 765 ggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaat 824
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggccatatgtgttgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaat 168
Query: 825 ccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgg 884
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 167 ccatggtcaacgtttcagctgtacgcttgccctcatcgtaacaactcctgacaccgatgg 108
Query: 885 gattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacct 944
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 107 gattgacattgccccagtaagtctccacctgtgggtgctggaggggatcaccatagacct 48
Query: 945 cactggtactggtgaggaggaacctggcgttgatcctct 983
||||||||||||||||||||||| |||||||||||||||
Sbjct: 47 cactggtactggtgaggaggaacttggcgttgatcctct 9
>gb|CX612233.1|CX612233 GABR1_1_F11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_1_F11_A002 3', mRNA sequence
Length = 749
Score = 866 bits (437), Expect = 0.0
Identities = 676/750 (90%), Gaps = 20/750 (2%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 740 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 681
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 680 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 623
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
||| ||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 622 aaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 569
Query: 207 aacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaaccaa 266
||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||
Sbjct: 568 aacacattcccaacgaactacgtggcc-atagcttttgtcagtataaggagagcgaccaa 510
Query: 267 gcag-ctagaagcagggccaccaaaaatttcc-atgtcatgtgcgctccttcatcctaac 324
|||| ||||||||||| |||||||||| |||| | || ||||| ||||||||||||
Sbjct: 509 gcaggctagaagcagg-ccaccaaaaacttcccaagtatcgtgcgg--cttcatcctaac 453
Query: 325 cttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcggaa 384
||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 452 cttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcggaa 395
Query: 385 gtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgaggaa 444
||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 394 gtcactgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaaggag 335
Query: 445 ctccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgcg 504
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 334 ctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgggtgttctgacg 275
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gaactcgatctgtgcattggggtcgatggtgtcctggacaaccttggcaagctcaagcat 215
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 214 ggtgaactcgccggggttacccaggttgaatggtcctacatggtcgccttccatcagctt 155
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 95
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 94 ataaaccgtcaagggctccttcctcagagcctgagcaacaaagttactgacaacacggcc 35
Query: 745 atcgtcaatgcacatgcgagggccatatgt 774
||||||||||||||||||||||||||||||
Sbjct: 34 atcgtcaatgcacatgcgagggccatatgt 5
>gb|AW564373.1|AW564373 LG1_290_H10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 862 bits (435), Expect = 0.0
Identities = 483/499 (96%)
Strand = Plus / Minus
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||
Sbjct: 509 gggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgct 450
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||
Sbjct: 449 tgtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgt 390
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 389 cctggacaaccttggcaagctcaagcatggtgaactcgccggggttacccaggttgaatg 330
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtcctacatggtcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 270
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 269 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagagcct 210
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtat 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 209 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtgt 150
Query: 777 tgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacg 90
Query: 837 tttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgc 896
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 89 tttcagctgtacgcttgccctcatcgtaacaactcctgacaccgatgggattgacattgc 30
Query: 897 cccagtaagtctccacctg 915
|||||||||||||||||||
Sbjct: 29 cccagtaagtctccacctg 11
>gb|BG947739.1|BG947739 IP1_8_E06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 698
Score = 848 bits (428), Expect = 0.0
Identities = 626/685 (91%), Gaps = 14/685 (2%)
Strand = Plus / Minus
Query: 120 gtatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggca 179
|||||||||||||||||||||||||||||| ||||||||||| |||| |||
Sbjct: 673 gtatagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagca 620
Query: 180 ttacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagc 239
||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 619 ttacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagc 561
Query: 240 ttttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc- 297
||||||||||| |||||| ||||||||| ||||||||||| |||||||||| ||||
Sbjct: 560 ttttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaacttccc 502
Query: 298 atgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtc 357
| || ||||| ||||||||||||||||||||||||| | ||||||| | |||||
Sbjct: 501 aagtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtc 446
Query: 358 ttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcag 417
||||||||| |||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct: 445 ttggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggag 386
Query: 418 ggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgctt 477
|||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 385 ggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgctt 326
Query: 478 gtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtc 537
||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 325 gtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgtc 266
Query: 538 ctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 ctggacaaccttggcaagctcaagcatggtgaactcgccggggttacccaggttgaatgg 206
Query: 598 ccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattg 657
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tcctacatggtcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattg 146
Query: 658 gaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctg 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 145 gaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagagcctg 86
Query: 718 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtatt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 85 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtgtt 26
Query: 778 gaagatacgtgcgatcctaacctca 802
|||||||||||||||||||||||||
Sbjct: 25 gaagatacgtgcgatcctaacctca 1
>gb|BE358947.1|BE358947 DG1_37_C03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 587
Score = 815 bits (411), Expect = 0.0
Identities = 495/522 (94%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 313 cttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagat 372
||||||||||||||||||||||||| | ||||||| | |||||||||||||| |||||
Sbjct: 520 cttcatcctaaccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagat 463
Query: 373 gcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcggttc 432
||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 462 gcgcttgcggaagtcactgaccatgaggggaaggccctcgcggagggggatcttcggctc 403
Query: 433 ccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctg 492
|||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 402 ccacccaaggagctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctg 343
Query: 493 ggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggc 552
|||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 342 ggtgttctgacggaactcgatctgtgcattggggtcgatggtgtcctggacaaccttggc 283
Query: 553 aagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcc 612
|||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 282 aagctcaagcatggtgaactcgccggggttacccaggttgaatggtcctacatggtcgcc 223
Query: 613 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 163
Query: 673 ctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttact 732
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 162 ctttccatcaccataaaccgtcaagggctccttcctcagagcctgagcaacaaagttact 103
Query: 733 gacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgat 792
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 102 gacaacacggccatcgtcaatgcacatgcgagggccatatgtgttgaagatacgtgcgat 43
Query: 793 cctaacctcaaggttggcaccacggtggtaatccatggtcaa 834
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 cctaacctcaaggttggcaccacggtggtaatccatggtcaa 1
>gb|BE598394.1|BE598394 PI1_81_A12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 697
Score = 803 bits (405), Expect = 0.0
Identities = 634/705 (89%), Gaps = 16/705 (2%)
Strand = Plus / Minus
Query: 61 tcaacaaagaattagatcatcctggtttatctccaactgttcaactgaacnnnnnnnnng 120
|||||||| ||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 692 tcaacaaaaaattagatcatccgggtttatctccaacggttcaactgaa--aaatttttg 635
Query: 121 tatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcat 180
||||||||||||||||||||||||||||| ||||||||||| |||| ||||
Sbjct: 634 tatagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagcat 581
Query: 181 tacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagct 240
|||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 tacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagct 522
Query: 241 tttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc-a 298
|||||||||| |||||| ||||||||| ||||||||||| |||||||||| |||| |
Sbjct: 521 tttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaacttccca 463
Query: 299 tgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtct 358
|| ||||| ||||||||||||||||||||||||| | ||||||| | ||||||
Sbjct: 462 agtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtct 407
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct: 406 tggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggagg 347
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 346 gggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgcttg 287
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 286 tgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgtcc 227
Query: 539 tggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggc 598
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 226 tggacaaccttggcaagctcaagcatggtgaactcgccggggttacccaggttgaatggt 167
Query: 599 cccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 658
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cctacatggtcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattgg 107
Query: 659 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 106 aaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagagcctga 47
Query: 719 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 2
>gb|BM326925.1|BM326925 PIC1_4_G12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 665
Score = 791 bits (399), Expect = 0.0
Identities = 594/652 (91%), Gaps = 14/652 (2%)
Strand = Plus / Minus
Query: 120 gtatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggca 179
|||||||||||||||||||||||||||||| ||||||||||| |||| |||
Sbjct: 640 gtatagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagca 587
Query: 180 ttacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagc 239
||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 586 ttacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagc 528
Query: 240 ttttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc- 297
||||||||||| |||||| ||||||||| ||||||||||| |||||||||| ||||
Sbjct: 527 ttttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaacttccc 469
Query: 298 atgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtc 357
| || ||||| ||||||||||||||||||||||||| | ||||||| | |||||
Sbjct: 468 aagtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtc 413
Query: 358 ttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcag 417
||||||||| |||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct: 412 ttggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggag 353
Query: 418 ggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgctt 477
|||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 352 ggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgctt 293
Query: 478 gtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtc 537
||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||
Sbjct: 292 gtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgtc 233
Query: 538 ctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatgg 597
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 232 ctggacaaccttggcaagctcaagcatggtgaactcgccggggttacccaggttgaatgg 173
Query: 598 ccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattg 657
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcctacatggtcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattg 113
Query: 658 gaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctg 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 112 gaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagagcctg 53
Query: 718 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggcca 769
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 agcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggcca 1
>gb|CX612323.1|CX612323 GABR1_1_F11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_1_F11_A002 5', mRNA sequence
Length = 777
Score = 753 bits (380), Expect = 0.0
Identities = 404/412 (98%)
Strand = Plus / Minus
Query: 616 catcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 catcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctt 718
Query: 676 tccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgac 735
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 717 tccatcaccataaaccgtcaagggctccttcctcagagcctgagcaacaaagttactgac 658
Query: 736 aacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcct 795
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 657 aacacggccatcgtcaatgcacatgcgagggccatatgtgttgaagatacgtgcgatcct 598
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 538
Query: 856 ctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctg 915
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ctcatcgtaacaactcctgacaccgatgggattgacattgccccagtaagtctccacctg 478
Query: 916 cgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgtt 975
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 477 tgggtgctggaggggatcaccatagacctcactggtactggtgaggaggaacttggcgtt 418
Query: 976 gatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 417 gatcctctttgccaatccgagcatgttcagagtgccaaccacattggtcttg 366
>gb|AW923940.1|AW923940 WS1_31_D05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 408
Score = 722 bits (364), Expect = 0.0
Identities = 391/400 (97%)
Strand = Plus / Minus
Query: 548 ttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgc 607
||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 408 ttggcaagctcaagcatggtgaactcgccggggttacccaggttgaatggtcctacatgg 349
Query: 608 tcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctg 289
Query: 668 gtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaag 727
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 288 gtttgctttccatcaccataaaccgtcaagggctccttcctcagagcctgagcaacaaag 229
Query: 728 ttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgt 787
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 228 ttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtgttgaagatacgt 169
Query: 788 gcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgta 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgta 109
Query: 848 cgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtc 907
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cgcttgccctcatcgtaacaactcctgacaccgatgggattgacattgccccagtaagtc 49
Query: 908 tccacctgcgggtgctggagaggatcaccatagacctcac 947
|||||||| ||||||||||| |||||||||||||||||||
Sbjct: 48 tccacctgtgggtgctggaggggatcaccatagacctcac 9
>gb|BM328668.1|BM328668 PIC1_25_A12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 650
Score = 692 bits (349), Expect = 0.0
Identities = 582/654 (88%), Gaps = 20/654 (3%)
Strand = Plus / Minus
Query: 30 ggatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctgg 85
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 640 ggatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccggg 581
Query: 86 tttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactga 145
|||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 580 tttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactga 523
Query: 146 gaaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccag 205
|||| ||||||||||| |||| |||||||||||||| || ||||||| |||
Sbjct: 522 gaaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcag 469
Query: 206 taacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaacca 265
|||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 468 taacacattcccaacgaactacgtggcc-atagcttttgtcagtataaggagagcgacca 410
Query: 266 agcag-ctagaagcagggccaccaaaaa-tttccatgtcatgtgcgctccttcatcctaa 323
||||| ||||||||||| |||||||||| |||||| || ||||| |||||||||||
Sbjct: 409 agcaggctagaagcagg-ccaccaaaaactttccaagtatcgtgcgg--cttcatcctaa 353
Query: 324 ccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcgga 383
|||||||||||||| | ||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 352 ccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcgga 295
Query: 384 agtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgagga 443
|||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 294 agtcactgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaagga 235
Query: 444 actccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgc 503
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 234 gctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgggtgttctgac 175
Query: 504 ggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagca 563
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ggaactcgatctgtgcattggggtcgatggtgtcctggacaaccttggcaagctcaagca 115
Query: 564 tggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagct 623
||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 114 tggtgaactcgccggggttacccaggttgaatggtcctacatggtcgccttccatcagct 55
Query: 624 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttc 1
>gb|BG103143.1|BG103143 RHIZ2_18_F09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 423
Score = 628 bits (317), Expect = e-178
Identities = 398/424 (93%), Gaps = 2/424 (0%)
Strand = Plus / Minus
Query: 314 ttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatg 373
|||||||||||||||||||||||| | ||||||| | |||||||||||||| ||||||
Sbjct: 422 ttcatcctaaccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatg 365
Query: 374 cgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcc 433
||||||||||||||| ||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 364 cgcttgcggaagtcgctgaccatgaggggaaggccctcgcggagggggatcttcggctcc 305
Query: 434 cacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgg 493
||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 304 cacccaaggagctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgg 245
Query: 494 gtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggca 553
||||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||
Sbjct: 244 gtgttctgacggaactcgatctgtgcattggggtcaatggtgtcctggacaaccttggca 185
Query: 554 agctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcct 613
||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 184 agctcaagcatggtgaactcgccggggttacccaggttgaatggtcctacatggtcgcct 125
Query: 614 tccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgc 65
Query: 674 tttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactg 733
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 tttccatcaccataaaccgtcaagggctccttcctcagagcctgagcaacaaagttactg 5
Query: 734 acaa 737
||||
Sbjct: 4 acaa 1
>gb|BE358837.1|BE358837 DG1_32_C04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 615 bits (310), Expect = e-174
Identities = 458/500 (91%), Gaps = 8/500 (1%)
Strand = Plus / Minus
Query: 206 taacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaacca 265
|||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 494 taacacattcccaacgaactacgtggcc-atagcttttgtcagtataaggagagcgacca 436
Query: 266 agcag-ctagaagcagggccaccaaaaatttcc-atgtcatgtgcgctccttcatcctaa 323
||||| ||||||||||| |||||||||| |||| | || ||||| |||||||||||
Sbjct: 435 agcaggctagaagcagg-ccaccaaaaacttcccaagtatcgtgcgg--cttcatcctaa 379
Query: 324 ccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcgga 383
|||||||||||||| | ||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 378 ccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcgga 321
Query: 384 agtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgagga 443
|||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 320 agtcactgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaagga 261
Query: 444 actccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgc 503
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 260 gctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgggtgttctgac 201
Query: 504 ggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagca 563
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaactcgatctgtgcattggggtcgatggtgtcctggacaaccttggcaagctcaagca 141
Query: 564 tggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagct 623
||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 140 tggtgaactcgccggggttacccaggttgaatggtcctacatggtcgccttccatcagct 81
Query: 624 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcac 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tcatcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcac 21
Query: 684 cataaaccgtcaagggctcc 703
||||||||||||||||||||
Sbjct: 20 cataaaccgtcaagggctcc 1
>gb|BE358980.1|BE358980 DG1_37_C03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 433
Score = 587 bits (296), Expect = e-165
Identities = 374/399 (93%), Gaps = 2/399 (0%)
Strand = Plus / Minus
Query: 313 cttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagat 372
||||||||||||||||||||||||| | ||||||| | |||||||||||||| |||||
Sbjct: 399 cttcatcctaaccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagat 342
Query: 373 gcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcggttc 432
||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 341 gcgcttgcggaagtcactgaccatgaggggaaggccctcgcggagggggatcttcggctc 282
Query: 433 ccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctg 492
|||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 281 ccacccaaggagctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctg 222
Query: 493 ggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggc 552
|||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 221 ggtgttctgacggaactcgatctgtgcattggggtcgatggtgtcctggacaaccttggc 162
Query: 553 aagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcc 612
|||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 161 aagctcaagcatggtgaactcgccggggttacccaggttgaatggtcctacatggtcgcc 102
Query: 613 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 42
Query: 673 ctttccatcaccataaaccgtcaagggctccttcctcag 711
|||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ctttccatcaccataaaccgtcaagggctccttcctcag 3
>gb|BE356139.1|BE356139 DG1_122_E02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 561 bits (283), Expect = e-158
Identities = 443/489 (90%), Gaps = 8/489 (1%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 486 gaatagcattacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtgg 427
Query: 232 cccatagcttttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaa 290
|| |||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||
Sbjct: 426 cc-atagcttttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaa 369
Query: 291 aatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggca 349
|| |||| | || ||||| ||||||||||||||||||||||||| | |||||||
Sbjct: 368 aacttcccaagtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcg 313
Query: 350 gtagcgtcttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccc 409
| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 312 gcggcgtcttggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccc 253
Query: 410 tcacgcagggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggc 469
|| || |||||||||||||| |||||||| |||| ||||||||| |||||||||||||||
Sbjct: 252 tcgcggagggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggc 193
Query: 470 ttgcgcttgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcg 529
||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 192 ttgcgcttgtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcg 133
Query: 530 atggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccagg 589
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 atggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccggggttacccagg 73
Query: 590 ttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaa 649
|||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttgaatggtcctacatggtcgccttccatcagcttcatcagaccctcaaccagatcagaa 13
Query: 650 acatattgg 658
|||||||||
Sbjct: 12 acatattgg 4
>gb|CB929269.1|CB929269 ABA1_41_B05.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_41_B05_A012 3', mRNA sequence
Length = 508
Score = 513 bits (259), Expect = e-143
Identities = 460/520 (88%), Gaps = 14/520 (2%)
Strand = Plus / Minus
Query: 124 agctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcattac 183
|||||||||||||||||||||| ||| ||||||||||| |||| |||||||
Sbjct: 508 agctaaggactgagagaactgataaa--aaaaatacagg----aaaaagaatagcattac 455
Query: 184 agcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagctttt 243
||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 454 agcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagctttt 396
Query: 244 gtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc-atgt 301
||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | |
Sbjct: 395 gtcagtataaggagagcaaccaagcaggctagaagcagg-ccaccaaaaatttcccaagg 337
Query: 302 catgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttgg 361
| ||||| ||||||||||||||||||||||||| | ||||||| | | |||||||
Sbjct: 336 ctcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggtgtcttgg 281
Query: 362 tcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcaggggg 421
||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||||
Sbjct: 280 tcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggaggggg 221
Query: 422 atcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgc 481
|||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 220 atcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgcttgtgt 161
Query: 482 gggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctgg 541
||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||
Sbjct: 160 gggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcaatggtgtcctgg 101
Query: 542 acaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggcccc 601
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||
Sbjct: 100 acaaccttggcaagctcaagcatggtgaactcgccggggttacccacgttgaatggtcct 41
Query: 602 acatgctcgccttccatcagcttcatcagaccctcaacca 641
||||| |||||||||||||||||||||||||||||||||
Sbjct: 40 acatgggcgccttccatcagcttcatcagaccctcaacca 1
>gb|CW435928.1|CW435928 fsbb001f152f01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f152f01, DNA
sequence
Length = 538
Score = 454 bits (229), Expect = e-125
Identities = 387/438 (88%), Gaps = 15/438 (3%)
Strand = Plus / Plus
Query: 1038 aaggttaaggctaacacgaaccatctcaagaaagcaaaacgagcagaaactaaatgaatc 1097
||||||||||||||| | |||||||||||||||| ||||| ||||| |||| ||||||||
Sbjct: 17 aaggttaaggctaac-caaaccatctcaagaaagaaaaacaagcaggaactgaatgaatc 75
Query: 1098 agccagacaccctttttcactttgttacattgctactccacattcagttgcaaaacaagt 1157
||||| || ||| ||||||| |||||||||||||||| |||||| |||||||||
Sbjct: 76 agcca-----ccctttggactttgtcacattgctactccacaatcagttccaaaacaagc 130
Query: 1158 aaagcataaggaaatttcgtgaagtgaacagtaagcgaagttgcttagaaagcggaaaag 1217
||||||| | ||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 131 aaagcatta--------cgtgaagtgaacagtaagcaaagttgcttagaaagtggaaaat 182
Query: 1218 gcaaaggccacttggacgtcaacttttgtgttgttgaaaattgaaatgcgccctttatgt 1277
||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 183 gcaaaagccacttggacgtcaacttttgtgttgttgaaaattgaagtgccccctttatgt 242
Query: 1278 cagaagtaagcaaagtacataactaacccagatccatgcgcaccgtgcgcttactttttg 1337
|||||||||||||||| || |||||||||||||||| | ||||||||||||||||||||
Sbjct: 243 cagaagtaagcaaagtccacaactaacccagatccaggtacaccgtgcgcttactttttg 302
Query: 1338 ctttcattaacggatcatgaagcaaagtaaaacggtacggagcaattgagttcagatcac 1397
||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 303 cttccattaacagatcatgaagctaagtaaaacggtacggagtaattgagttcagatcac 362
Query: 1398 agctatagctttcgctagtacgtttttccctgtttcaaatgcacgggaaaatgcagcaag 1457
||||||| |||| |||||||||||||| ||| ||| ||| | |||||||||||||| ||
Sbjct: 363 agctataccttttgctagtacgttttt-cctatttgaaacgtacgggaaaatgcagtcag 421
Query: 1458 cattcagaagcataaaaa 1475
||||||||||||||||||
Sbjct: 422 cattcagaagcataaaaa 439
>gb|BG933568.1|BG933568 WS1_4_H09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 496
Score = 444 bits (224), Expect = e-122
Identities = 435/500 (87%), Gaps = 16/500 (3%)
Strand = Plus / Minus
Query: 61 tcaacaaagaattagatcatcctggtttatctccaactgttcaactgaacnnnnnnnnng 120
|||||||||||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 493 tcaacaaagaattagatcatccgggtttatctccaacggttcaactgaa--atttttttg 436
Query: 121 tatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcat 180
||||||||||||||||||||||||||||| ||||||||||| |||| ||||
Sbjct: 435 tatagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagcat 382
Query: 181 tacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagct 240
|||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagct 323
Query: 241 tttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc-a 298
|||||||||| |||||| ||||||||| ||||||||||| |||||||||| |||| |
Sbjct: 322 tttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaacttccca 264
Query: 299 tgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtct 358
|| ||||| ||||||||||||||||||||||||| | ||||||| | ||||||
Sbjct: 263 agtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtct 208
Query: 359 tggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagg 418
|||||||| |||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct: 207 tggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggagg 148
Query: 419 gggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttg 478
||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 147 gggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgcttg 88
Query: 479 tgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcc 538
|| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 87 tgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgtcc 28
Query: 539 tggacaaccttggcaagctc 558
||||||||||||||||||||
Sbjct: 27 tggacaaccttggcaagctc 8
>gb|AW680120.1|AW680120 WS1_4_H09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 442 bits (223), Expect = e-122
Identities = 434/499 (86%), Gaps = 16/499 (3%)
Strand = Plus / Minus
Query: 62 caacaaagaattagatcatcctggtttatctccaactgttcaactgaacnnnnnnnnngt 121
||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 492 caacaaagaattagatcatccgggtttatctccaacggttcaactgaa--atttttttgt 435
Query: 122 atagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcatt 181
|||||||||||||||||||||||||||| ||||||||||| |||| |||||
Sbjct: 434 atagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagcatt 381
Query: 182 acagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagctt 241
||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 acagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagctt 322
Query: 242 ttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc-at 299
||||||||| |||||| ||||||||| ||||||||||| |||||||||| |||| |
Sbjct: 321 ttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaacttcccaa 263
Query: 300 gtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtctt 359
|| ||||| ||||||||||||||||||||||||| | ||||||| | |||||||
Sbjct: 262 gtatcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtctt 207
Query: 360 ggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcaggg 419
||||||| |||||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct: 206 ggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggaggg 147
Query: 420 ggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgt 479
|||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||
Sbjct: 146 ggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgcttgt 87
Query: 480 gcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcct 539
| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||
Sbjct: 86 gtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcgatggtgtcct 27
Query: 540 ggacaaccttggcaagctc 558
|||||||||||||||||||
Sbjct: 26 ggacaaccttggcaagctc 8
>gb|BG052710.1|BG052710 RHIZ2_28_G06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 500
Score = 442 bits (223), Expect = e-122
Identities = 435/501 (86%), Gaps = 18/501 (3%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 489 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 430
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 429 ttatctccaaccgttcaactgaa--atttttttgtatagctaaggactgagagaactgag 372
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
||| |||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 371 aaaaaaaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 316
Query: 207 aacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaaccaa 266
|||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||
Sbjct: 315 aacacattcccaacaaactacgtggcc-atagcttttgtcagtataaggagagcgaccaa 257
Query: 267 gcag-ctagaagcagggccaccaaaaatttcc-atgtcatgtgcgctccttcatcctaac 324
|||| ||||||||||| ||||||||||||||| | ||| ||||| ||||||||||||
Sbjct: 256 gcaggctagaagcagg-ccaccaaaaatttcccaagtctcgtgcgg--cttcatcctaac 200
Query: 325 cttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcggaa 384
||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 199 cttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcggaa 142
Query: 385 gtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgaggaa 444
|||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 141 gtcgctgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaaggag 82
Query: 445 ctccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgcg 504
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 81 ctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgggtgttctgacg 22
Query: 505 gaactcgatccgtgcgttggg 525
|||||||||| |||| |||||
Sbjct: 21 gaactcgatctgtgcattggg 1
>gb|BG559870.1|BG559870 RHIZ2_74_F04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 468
Score = 442 bits (223), Expect = e-122
Identities = 400/453 (88%), Gaps = 12/453 (2%)
Strand = Plus / Minus
Query: 120 gtatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggca 179
|||||||||||||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 443 gtatagctaaggactgagagaactgagaaaaaaaaaatacagg----aaaaagaatagca 388
Query: 180 ttacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagc 239
||||||||||| || ||| ||| |||||||||||||||||| |||||||||||| |||||
Sbjct: 387 ttacagcatcaaccaagggatttcagtaacacattcccaacaaactacgtggcc-atagc 329
Query: 240 ttttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc- 297
||||||||||| |||||| ||||||||| ||| ||||||| |||||||||||||||
Sbjct: 328 ttttgtcagtataaggagagcgaccaagcaggctaaaagcagg-ccaccaaaaatttccc 270
Query: 298 atgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtc 357
| ||| ||||| ||||||||||||||||||||||||| | ||||||| | |||||
Sbjct: 269 aagtctcgtgcgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtc 214
Query: 358 ttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcag 417
||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct: 213 ttggtcgccaaagatgcgcttgcggaagtcgctgaccatgaggggaaggccctcgcggag 154
Query: 418 ggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgctt 477
|||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 153 ggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgctt 94
Query: 478 gtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtc 537
||| ||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||
Sbjct: 93 gtgtgggtcgtcctgggtgttctgacggaactcgatctgtgcattggggtcaatggtgtc 34
Query: 538 ctggacaaccttggcaagctcaagcatggtgaa 570
|||||||||||||||||||||||||||||||||
Sbjct: 33 ctggacaaccttggcaagctcaagcatggtgaa 1
>gb|BM328675.1|BM328675 PIC1_25_B12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 504
Score = 426 bits (215), Expect = e-117
Identities = 439/508 (86%), Gaps = 20/508 (3%)
Strand = Plus / Minus
Query: 30 ggatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctgg 85
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 494 ggatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccggg 435
Query: 86 tttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactga 145
|||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 434 tttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactga 377
Query: 146 gaaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccag 205
|||| ||||||||||| |||| |||||||||||||| || ||| ||| |||
Sbjct: 376 gaaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaagggatttcag 323
Query: 206 taacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaacca 265
|||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 322 taacacattcccaacgaactacgtggcc-atagcttttgtcagtataaggagagcgacca 264
Query: 266 agcag-ctagaagcagggccaccaaaaa-tttccatgtcatgtgcgctccttcatcctaa 323
||||| ||||||||||| |||||||||| |||||| || ||||| |||||||||||
Sbjct: 263 agcaggctagaagcagg-ccaccaaaaactttccaagtatcgtgcgg--cttcatcctaa 207
Query: 324 ccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcgga 383
|||||||||||||| | ||||||| | |||||||||||||| ||||||||||||||||
Sbjct: 206 ccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcgga 149
Query: 384 agtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgagga 443
|||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 148 agtcactgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaagga 89
Query: 444 actccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctgggtgttcttgc 503
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 88 gctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctgggtgttctgac 29
Query: 504 ggaactcgatccgtgcgttggggtcgat 531
||||||||||| |||| |||||||||||
Sbjct: 28 ggaactcgatctgtgcattggggtcgat 1
>gb|CN128193.1|CN128193 RHOH1_27_E03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_E03_A002 5', mRNA sequence
Length = 696
Score = 400 bits (202), Expect = e-109
Identities = 463/550 (84%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 554 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 495
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 494 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 435
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 434 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 375
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 374 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 315
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 314 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 255
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 254 gaaagctcctagtctgtttgccatcgccataaactgtcaaaggctccttcctcagcgcct 195
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtat 776
|||||||||| |||||||||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 194 gagcaacaaaattactgacaacacgaccgtcatcaatgcacatgcgaggaccatatgtgt 135
Query: 777 tgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacg 836
||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| || |
Sbjct: 134 tgaagatccgggcaatccttacctcaaggttggcaccacgatggtagtccatggttaatg 75
Query: 837 tttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgc 896
||||||||||||||||||||||||| || |||||||||||||| || || ||||||||||
Sbjct: 74 tttcagctgtacgcttgccctcatcatagcagctcctgacacctatagggttgacattgc 15
Query: 897 cccagtaagt 906
|||| |||||
Sbjct: 14 cccaataagt 5
>gb|CW065183.1|CW065183 104_311_10522997_115_30121 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522997, DNA
sequence
Length = 540
Score = 398 bits (201), Expect = e-109
Identities = 277/301 (92%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 1175 cgtgaagtgaacagtaagcgaagttgcttagaaagcggaaaaggcaaaggccacttggac 1234
||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 5 cgtgaagtgaacagtaagcaaagttgcttagaaagtggaaaatgcaaaagccacttggac 64
Query: 1235 gtcaacttttgtgttgttgaaaattgaaatgcgccctttatgtcagaagtaagcaaagta 1294
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 65 gtcaacttttgtgttgttgaaaattgaagtgccccctttatgtcagaagtaagcaaagtc 124
Query: 1295 cataactaacccagatccatgcgcaccgtgcgcttactttttgctttcattaacggatca 1354
|| |||||||||||||||| | ||||||||||||||||||||||| ||||||| |||||
Sbjct: 125 cacaactaacccagatccaggtacaccgtgcgcttactttttgcttccattaacagatca 184
Query: 1355 tgaagcaaagtaaaacggtacggagcaattgagttcagatcacagctatagctttcgcta 1414
|||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 185 tgaagctaagtaaaacggtacggagtaattgagttcagatcacagctataccttttgcta 244
Query: 1415 gtacgtttttccctgtttcaaatgcacgggaaaatgcagcaagcattcagaagcataaaa 1474
|||||||||| ||| ||| ||| | |||||||||||||| |||||||||||||||||||
Sbjct: 245 gtacgttttt-cctatttgaaacgtacgggaaaatgcagtcagcattcagaagcataaaa 303
Query: 1475 a 1475
|
Sbjct: 304 a 304
>gb|BG948032.1|BG948032 IP1_8_E06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 371 bits (187), Expect = e-100
Identities = 205/211 (97%)
Strand = Plus / Minus
Query: 817 gtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgac 876
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 596 gtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacaactcctgac 537
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 536 accgatgggattgacattgccccagtaagtctccacctgtgggtgctggaggggatcacc 477
Query: 937 atagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccgag 996
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 476 atagacctcactggtactggtgaggaggaacttggcgttgatcctctttgccaatccgag 417
Query: 997 catgttcagagtcccaaccacattggtcttg 1027
|||||||||||| ||||||||||||||||||
Sbjct: 416 catgttcagagtgccaaccacattggtcttg 386
>gb|BM330970.1|BM330970 PIC1_67_H03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 459
Score = 367 bits (185), Expect = 2e-099
Identities = 397/462 (85%), Gaps = 20/462 (4%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 448 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 389
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 388 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 331
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
||| ||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 330 aaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 277
Query: 207 aacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaaccaa 266
||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||
Sbjct: 276 aacacattcccaacgaactacgtggcc-atagcttttgtcagtataaggagagcgaccaa 218
Query: 267 gcag-ctagaagcagggccaccaaaaatttcc-atgtcatgtgcgctccttcatcctaac 324
|||| ||||||||||| |||||||||| |||| | || ||||| ||||||||||||
Sbjct: 217 gcaggctagaagcagg-ccaccaaaaacttcccaagtatcgtgcgg--cttcatcctaac 161
Query: 325 cttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagatgcgcttgcggaa 384
||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 160 cttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagatgcgcttgcggaa 103
Query: 385 gtcggagaccatgaggggaaggccctcacgcagggggatcttcggttcccacccgaggaa 444
||| ||||||||||||||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 102 gtcactgaccatgaggggaaggccctcgcggagggggatcttcggctcccacccaaggag 43
Query: 445 ctccttggcgcggctgatgtcgggcttgcgcttgtgcgggtc 486
||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 42 ctccttggcacggctgatgtcgggcttgcgcttgtgtgggtc 1
>gb|AW922728.1|AW922728 DG1_45_A08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 298
Score = 339 bits (171), Expect = 4e-091
Identities = 250/274 (91%), Gaps = 3/274 (1%)
Strand = Plus / Minus
Query: 313 cttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaagat 372
||||||||||||||||||||||||| | ||||||| | |||||||||||||| |||||
Sbjct: 272 cttcatcctaaccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaagat 215
Query: 373 gcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcggttc 432
||||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 214 gcgcttgcggaagtcactgaccatgaggggaaggccctcgcggagggggatcttcggctc 155
Query: 433 ccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtcctg 492
|||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 154 ccacccaaggagctccttggcacggctgatgtcgggcttgcgcttgtgtgggtcgtcctg 95
Query: 493 ggtgttcttgcggaactcgatccgtgc-gttggggtcgatggtgtcctggacaaccttgg 551
|||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 94 ggtgttctgacggaactcgatctgtgcaattggggtcgatggtgtcctggacaaccttgg 35
Query: 552 caagctcaagcatggtgaactcgccagggttacc 585
||||||||| ||||||||||||||| ||||||||
Sbjct: 34 caagctcaaacatggtgaactcgccggggttacc 1
>gb|CF426874.1|CF426874 PH1_2_E09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_2_E09_A002 3', mRNA sequence
Length = 598
Score = 325 bits (164), Expect = 7e-087
Identities = 299/344 (86%)
Strand = Plus / Minus
Query: 677 ccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgaca 736
||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 390 ccatcgccataaactgtcaaaggctccttcctcagcgcctgagcaacaaaattactgaca 331
Query: 737 acacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatccta 796
||||| || || ||||||||||||||||| |||||||| |||||||| || || |||||
Sbjct: 330 acacgaccgtcatcaatgcacatgcgaggaccatatgtgttgaagatccgggcaatcctt 271
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
|||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 270 acctcaaggttggcaccacgatggtagtccatggttaatgtttcagctgtacgcttgccc 211
Query: 857 tcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgc 916
||||| ||||||||||||||||| || || |||||||||||||| ||| | ||||||||
Sbjct: 210 tcatcataacagctcctgacacctatagggttgacattgccccaataaatttccacctga 151
Query: 917 gggtgctggagaggatcaccatagacctcactggtactggtgaggaggaacctggcgttg 976
|||||||||| |||||||||||||| |||||||| || || || |||||||| ||
Sbjct: 150 aggtgctggaggggatcaccatagacttcactggtgcttgtaagtaggaaccttgcccca 91
Query: 977 atcctctttgctaatccgagcatgttcagagtcccaaccacatt 1020
|||||||| | || || ||||||||||| |||||||| |||||
Sbjct: 90 atcctcttggtcaacccaagcatgttcagtgtcccaacaacatt 47
>gb|BG047632.1|BG047632 OV1_26_C08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 321 bits (162), Expect = 1e-085
Identities = 405/486 (83%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 486 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 427
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 426 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 367
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 366 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 307
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 306 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 247
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 246 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 187
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 186 gaaagctcctagtctgtttgccatcgccataaactgtcaaaggctccttcctcagcgcct 127
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtat 776
|||||||||| |||||||||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 126 gagcaacaaaattactgacaacacgaccgtcatcaatgcacatgcgaggaccatatgtgt 67
Query: 777 tgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaatccatggtcaacg 836
||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| || |
Sbjct: 66 tgaagatccgggcaatccttacctcaaggttggcaccacgatggtagtccatggttaatg 7
Query: 837 tttcag 842
||||||
Sbjct: 6 tttcag 1
>gb|CF772893.1|CF772893 DSBF1_40_F07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_40_F07_A010 3', mRNA sequence
Length = 393
Score = 315 bits (159), Expect = 6e-084
Identities = 327/376 (86%), Gaps = 14/376 (3%)
Strand = Plus / Minus
Query: 120 gtatagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggca 179
|||||||||||||||||||||||||||||| ||||||||||| |||| |||
Sbjct: 364 gtatagctaaggactgagagaactgagaaa--aaaaatacagg----aaaaagaatagca 311
Query: 180 ttacagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagc 239
||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 310 ttacagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtggcc-atagc 252
Query: 240 ttttgtcagtaaggagagagcaaccaagcag-ctagaagcagggccaccaaaaattt-cc 297
||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 251 ttttgtcagtataaggagagcgaccaagcaggctagaagcagg-ccaccaaaaatttccc 193
Query: 298 atgtcatgtgcgctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtc 357
| || ||| | ||||||||||||||||||||||||| | ||||||| | |||||
Sbjct: 192 aagtatcgtgtgg--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtc 137
Query: 358 ttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcag 417
||||||||| |||||||||||||||||||| ||||||||||||||||||||| || ||
Sbjct: 136 ttggtcgccaaagatgcgcttgcggaagtcactgaccatgaggggaaggccctcgcggag 77
Query: 418 ggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgctt 477
|||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 76 ggggatcttcggctcccacccaaggagctccttggcacggctgatgtcgggcttgcgctt 17
Query: 478 gtgcgggtcgtcctgg 493
||| ||||||||||||
Sbjct: 16 gtgtgggtcgtcctgg 1
>gb|BG103104.1|BG103104 RHIZ2_18_C01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 386
Score = 311 bits (157), Expect = 1e-082
Identities = 341/398 (85%), Gaps = 14/398 (3%)
Strand = Plus / Minus
Query: 72 ttagatcatcctggtttatctccaactgttcaactgaacnnnnnnnnngtatagctaagg 131
||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 386 ttagatcatccgggtttatctccaaccgttcaactgaa--atttttttgtatagctaagg 329
Query: 132 actgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcattacagcatcag 191
|||||||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 328 actgagagaactgagaaaaaaaaaatacagg----aaaaagaatagcattacagcatcaa 273
Query: 192 ccgaggtattccagtaacacattcccaacgaactacgtggcccatagcttttgtcagtaa 251
|| ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 272 ccaaggtatttcagtaacacattcccaacaaactacgtggcc-atagcttttgtcagtat 214
Query: 252 ggagagagcaaccaagcag-ctagaagcagggccaccaaaaatttcc-atgtcatgtgcg 309
|||||| ||||||||| ||||||||||| ||||||||||||||| | ||| |||||
Sbjct: 213 aaggagagcgaccaagcaggctagaagcagg-ccaccaaaaatttcccaagtctcgtgcg 155
Query: 310 ctccttcatcctaaccttgctggtttccggggtggtggcagtagcgtcttggtcgccgaa 369
||||||||||||||||||||||||| | ||||||| | |||||||||||||| ||
Sbjct: 154 g--cttcatcctaaccttgctggtttccag--tggtggcggcggcgtcttggtcgccaaa 99
Query: 370 gatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcgg 429
||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||
Sbjct: 98 gatgcgcttgcggaagtcgctgaccatgaggggaaggccctcgcggagggggatcttcgg 39
Query: 430 ttcccacccgaggaactccttggcgcggctgatgtcgg 467
|||||||| |||| ||||||||| |||||||||||||
Sbjct: 38 ctcccacccaaggagctccttggcacggctgatgtcgg 1
>gb|CX623197.1|CX623197 GABR1_68_F11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F11_A002 3', mRNA sequence
Length = 752
Score = 293 bits (148), Expect = 2e-077
Identities = 379/456 (83%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 456 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 397
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 396 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 337
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 336 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 277
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 276 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 217
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 216 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 157
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 156 gaaagctcctagtctgtttgccatcgccataaactgtcaaaggctccttcctcagcgcct 97
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtat 776
|||||||||| |||||||||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 96 gagcaacaaaattactgacaacacgaccgtcatcaatgcacatgcgaggaccatatgtgt 37
Query: 777 tgaagatacgtgcgatcctaacctcaaggttggcac 812
||||||| || || ||||| ||||||||||||||||
Sbjct: 36 tgaagatccgggcaatccttacctcaaggttggcac 1
>gb|BM322440.1|BM322440 PIC1_4_G12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 588
Score = 270 bits (136), Expect = 3e-070
Identities = 151/156 (96%)
Strand = Plus / Minus
Query: 872 ctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagagga 931
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 588 ctgacaccgatgggattgacattgccccagtaagtctccacctgtgggtgctggagggga 529
Query: 932 tcaccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaat 991
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 528 tcaccatagacctcactggtactggtgaggaggaacttggcgttgatcctctttgccaat 469
Query: 992 ccgagcatgttcagagtcccaaccacattggtcttg 1027
||||||||||||||||| ||||||||||||||||||
Sbjct: 468 ccgagcatgttcagagtgccaaccacattggtcttg 433
>gb|CN128125.1|CN128125 RHOH1_27_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_E03_A002 3', mRNA sequence
Length = 757
Score = 270 bits (136), Expect = 3e-070
Identities = 367/444 (82%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 444 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 385
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 384 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 325
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 324 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 265
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 264 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 205
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 204 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 145
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 144 gaaagctcctagtctgtttgccatcgccataaactgtcaaaggctccttcctcagcgcct 85
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtat 776
|||||||||| |||||||||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 84 gagcaacaaaattactgacaacacgaccgtcatcaatgcacatgcgaggaccatatgtgt 25
Query: 777 tgaagatacgtgcgatcctaacct 800
||||||| || || ||||| ||||
Sbjct: 24 tgaagatccgggcaatccttacct 1
>gb|CX611045.1|CX611045 ANR1_22_G07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_G07_A002 3', mRNA sequence
Length = 790
Score = 266 bits (134), Expect = 5e-069
Identities = 347/418 (83%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 422 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 363
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 362 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 303
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| |||||||||||| || || | |||||||||||||
Sbjct: 302 tgtgtggatcgtctgcagtgtttgggcggaactcgatgcgcgcctctgggtcgatggtgt 243
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 242 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 183
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 182 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 123
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 122 gaaagctcctagtctgtttgccatcgccataaactgtcaaaggctccttcctcagcgcct 63
Query: 717 gagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgt 774
|||||||||| |||||||||||||| || || ||||||||||||||||| ||||||||
Sbjct: 62 gagcaacaaaattactgacaacacgaccgtcatcaatgcacatgcgaggaccatatgt 5
>gb|CW069120.1|CW069120 104_318_10525655_1_30095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10525655, DNA
sequence
Length = 538
Score = 208 bits (105), Expect = 1e-051
Identities = 232/272 (85%), Gaps = 15/272 (5%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 280 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 221
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 220 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 163
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
||| ||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 162 aaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 109
Query: 207 aacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaaccaa 266
||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 108 aacacattcccaacgaactacgtgg-ccatagcttttgtcagtataaggagagcgaccaa 50
Query: 267 gca-gctagaagcagggccaccaaaaatttcc 297
||| |||||||||| |||||||||||| ||||
Sbjct: 49 gcaggctagaagca-ggccaccaaaaacttcc 19
>gb|AW282755.1|AW282755 LG1_290_H10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 490
Score = 200 bits (101), Expect = 3e-049
Identities = 218/256 (85%), Gaps = 14/256 (5%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 253 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 194
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 193 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 136
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
||| ||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 135 aaa--aaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 82
Query: 207 aacacattcccaacgaactacgtggcccatagcttttgtcagtaaggagagagcaaccaa 266
||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 81 aacacattcccaacgaactacgtgg-ccatagcttttgtcagtataaggagagcgaccaa 23
Query: 267 gca-gctagaagcagg 281
||| ||||||||||||
Sbjct: 22 gcaggctagaagcagg 7
>gb|AI724163.1|AI724163 RHIZ1_7_G05.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 287
Score = 192 bits (97), Expect = 6e-047
Identities = 236/278 (84%), Gaps = 14/278 (5%)
Strand = Plus / Minus
Query: 62 caacaaagaattagatcatcctggtttatctccaactgttcaactgaacnnnnnnnnngt 121
||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 287 caacaaagaattagatcatccgggtttatctccaacggttcaactgaa--atttttttgt 230
Query: 122 atagctaaggactgagagaactgagaaagaaaaaatacaggggnnnnnnngaatggcatt 181
||||||||||||||| |||||||||||| ||||||||||| |||| |||||
Sbjct: 229 atagctaaggactgaaagaactgagaaa--aaaaatacagg----aaaaagaatagcatt 176
Query: 182 acagcatcagccgaggtattccagtaacacattcccaacgaactacgtggcccatagctt 241
||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 175 acagcatcaaccaaggtatttcagtaacacattcccaacgaactacgtgg-ccatagctt 117
Query: 242 ttgtcagtaaggagagagcaaccaagca-gctagaagcagggccaccaaaaattt-ccat 299
||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||
Sbjct: 116 ttgtcagtataaggagagcaaccaagcaggctagaagca-ggccaccaaaaatttcccaa 58
Query: 300 gtcatgtgcgctccttcatcctaaccttgctggtttcc 337
||| ||||| |||||||||||||||||||||||||
Sbjct: 57 gtctcgtgcg--gcttcatcctaaccttgctggtttcc 22
>gb|CW195601.1|CW195601 104_619_11180724_116_36808_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180724, DNA
sequence
Length = 596
Score = 174 bits (88), Expect = 2e-041
Identities = 176/207 (85%), Gaps = 12/207 (5%)
Strand = Plus / Minus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 206 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 147
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 146 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 89
Query: 147 aaagaaaaaatacaggggnnnnnnngaatggcattacagcatcagccgaggtattccagt 206
|| |||||||||||| |||| |||||||||||||| || ||||||| ||||
Sbjct: 88 aa--aaaaaatacagg----aaaaagaatagcattacagcatcaaccaaggtatttcagt 35
Query: 207 aacacattcccaacgaactacgtggcc 233
|||||||||||||||||||||||||||
Sbjct: 34 aacacattcccaacgaactacgtggcc 8
>gb|CX622843.1|CX622843 GABR1_66_G03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_G03_A002 3', mRNA sequence
Length = 720
Score = 170 bits (86), Expect = 2e-040
Identities = 299/370 (80%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || |||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 372 cttggtccccgaagatacgtctgcggaagtcagtgaccatgcgaggaagaccctcacgaa 313
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| || |||||||
Sbjct: 312 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcagggttgcgct 253
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||| ||
Sbjct: 252 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggggt 193
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 192 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 133
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 132 ggccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 73
Query: 657 ggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcct 716
| || ||||| || || || ||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 72 gaaagctcctagtctgtttgccatcgccataaactgtcaaagggtccttcctcagcgcct 13
Query: 717 gagcaacaaa 726
||||||||||
Sbjct: 12 gagcaacaaa 3
>gb|BZ337599.1|BZ337599 ia89f08.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia89f08 5', DNA sequence
Length = 717
Score = 165 bits (83), Expect = 1e-038
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 386
Query: 774 tattgaagatacgtgcgatcctaacct 800
| |||||||||||||||||||||||||
Sbjct: 387 tgttgaagatacgtgcgatcctaacct 413
Score = 157 bits (79), Expect = 4e-036
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 564
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| |||||||||||
Sbjct: 565 tcatcgtaacaactcctgacacc 587
Score = 151 bits (76), Expect = 2e-034
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 638 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 accagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaag 145
Query: 698 ggctccttcctcagtgcctg 717
|||||||||||||| |||||
Sbjct: 146 ggctccttcctcagagcctg 165
>gb|CW341966.1|CW341966 104_843_11486613_116_36157_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486613, DNA
sequence
Length = 758
Score = 165 bits (83), Expect = 1e-038
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 116
Query: 774 tattgaagatacgtgcgatcctaacct 800
| |||||||||||||||||||||||||
Sbjct: 117 tgttgaagatacgtgcgatcctaacct 143
Score = 157 bits (79), Expect = 4e-036
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 797 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 acctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccc 294
Query: 857 tcatcgtaacagctcctgacacc 879
||||||||||| |||||||||||
Sbjct: 295 tcatcgtaacaactcctgacacc 317
>gb|BG047988.1|BG047988 OV1_26_C08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 635
Score = 155 bits (78), Expect = 1e-035
Identities = 270/334 (80%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 338 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 279
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 278 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 219
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 218 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 159
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatg 596
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 158 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttgaatg 99
Query: 597 gccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatatt 656
| || | || || |||||||| ||||||||||| || || |||| ||| || || ||||
Sbjct: 98 gtccaatgtgatccccttccatgagcttcatcagcccttccaccaaatctgatacgtatt 39
Query: 657 ggaaactcctggtttgctttccatcaccataaac 690
| || ||||| || || || ||||| ||||||||
Sbjct: 38 gaaagctcctagtctgtttgccatcgccataaac 5
>gb|CW155314.1|CW155314 104_557_11146073_148_36360_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146073, DNA
sequence
Length = 683
Score = 129 bits (65), Expect = 8e-028
Identities = 200/245 (81%)
Strand = Plus / Minus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
||||||||||| |||||||||| ||||||||| || || ||||| || || || | |
Sbjct: 256 ccgaagatgcgggcgcggaagtcgtggaccatgagcgggagtccctcgcggagcggcacc 197
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
|| || |||||||| || | || |||||||||| ||||||| ||||||||||||||||||
Sbjct: 196 ttgggctcccaccccagcagctgcttggcgcgggtgatgtccggcttgcgcttgtgcggg 137
Query: 485 tcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggaca 544
||||| |||||| ||||||| |||| || ||| |||||||||| ||||| ||
Sbjct: 136 tcgtcggcggtgttggggcggaacacgatgcgcgcgccccggtcgatggtctcctgcacc 77
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
|||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 76 accttggccagctccagcatcgtgaactcgcccgggttccccaggttgaacgggcccacg 17
Query: 605 tgctc 609
|||||
Sbjct: 16 tgctc 12
>gb|CW177065.1|CW177065 104_590_11158824_116_36593_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158824, DNA
sequence
Length = 640
Score = 129 bits (65), Expect = 8e-028
Identities = 200/245 (81%)
Strand = Plus / Plus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
||||||||||| |||||||||| ||||||||| || || ||||| || || || | |
Sbjct: 329 ccgaagatgcgggcgcggaagtcgtggaccatgagcgggagtccctcgcggagcggcacc 388
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
|| || |||||||| || | || |||||||||| ||||||| ||||||||||||||||||
Sbjct: 389 ttgggctcccaccccagcagctgcttggcgcgggtgatgtccggcttgcgcttgtgcggg 448
Query: 485 tcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggaca 544
||||| |||||| ||||||| |||| || ||| |||||||||| ||||| ||
Sbjct: 449 tcgtcggcggtgttggggcggaacacgatgcgcgcgccccggtcgatggtctcctgcacc 508
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccccaca 604
|||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| || |||||
Sbjct: 509 accttggccagctccagcatcgtgaactcgcccgggttccccaggttgaacgggcccacg 568
Query: 605 tgctc 609
|||||
Sbjct: 569 tgctc 573
>gb|CW195602.1|CW195602 104_619_11180724_148_36804_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180724, DNA
sequence
Length = 677
Score = 129 bits (65), Expect = 8e-028
Identities = 118/136 (86%), Gaps = 8/136 (5%)
Strand = Plus / Plus
Query: 31 gatttataccatatatatgatgctatgctctcaa----caaagaattagatcatcctggt 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 530 gatttataccatatatatgatgctatgctctcaatcaacaaagaattagatcatccgggt 589
Query: 87 ttatctccaactgttcaactgaacnnnnnnnnngtatagctaaggactgagagaactgag 146
||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 590 ttatctccaacggttcaactgaa--atttttttgtatagctaaggactgagagaactgag 647
Query: 147 aaagaaaaaatacagg 162
|| ||||||||||||
Sbjct: 648 aa--aaaaaatacagg 661
>gb|CD424899.1|CD424899 SA1_9_C07.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_C07_A002 3', mRNA sequence
Length = 677
Score = 129 bits (65), Expect = 8e-028
Identities = 108/122 (88%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 653 tattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagt 712
|||| ||||||| || |||| ||| ||||||||||||||||||| ||||||||||||| |
Sbjct: 416 tattagaaactcatgttttgatttgcatcaccataaaccgtcaacggctccttcctcaat 357
Query: 713 gcctgagcaac----aaagttactgacaacacggccatcgtcaatgcacatgcgagggcc 768
|||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 356 tcctgagcaacaattaaagttactgacaacacagccatcatcaatgcacatgcgagggcc 297
Query: 769 at 770
||
Sbjct: 296 at 295
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 652 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 595
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 594 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 538
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 537 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 488
>gb|CN125323.1|CN125323 RHOH1_10_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_10_H10_A002 3', mRNA sequence
Length = 752
Score = 129 bits (65), Expect = 8e-028
Identities = 194/237 (81%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 447 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 388
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 387 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 328
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 327 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 268
Query: 537 cctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttga 593
|||| || ||||| || ||||| ||||||||||| || ||||| ||||| |||||||
Sbjct: 267 cctgaaccaccttagccagctccagcatggtgaattctccaggattaccgaggttga 211
Score = 113 bits (57), Expect = 5e-023
Identities = 120/141 (85%)
Strand = Plus / Minus
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctca 946
|||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 214 ttgacattgccccaataagtttccacctgagggtgctggaggggatcaccatagacttca 155
Query: 947 ctggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcaga 1006
||||| || || || |||||||| || |||||||| || || || |||||||||||
Sbjct: 154 ctggtgcttgtaagtaggaaccttgccccaatcctcttggccaacccaagcatgttcagt 95
Query: 1007 gtcccaaccacattggtcttg 1027
|||||||| ||||| ||||||
Sbjct: 94 gtcccaacaacattcgtcttg 74
>gb|CN149962.1|CN149962 WOUND1_66_B07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_B07_A002 3', mRNA sequence
Length = 836
Score = 129 bits (65), Expect = 8e-028
Identities = 108/122 (88%), Gaps = 4/122 (3%)
Strand = Plus / Minus
Query: 653 tattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagt 712
|||| ||||||| || |||| ||| ||||||||||||||||||| ||||||||||||| |
Sbjct: 700 tattagaaactcatgttttgatttgcatcaccataaaccgtcaacggctccttcctcaat 641
Query: 713 gcctgagcaac----aaagttactgacaacacggccatcgtcaatgcacatgcgagggcc 768
||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||
Sbjct: 640 gcctgagcaacaattaaagttactgacaacacagccatcatcaatgcacatgcgaaggcc 581
Query: 769 at 770
||
Sbjct: 580 at 579
>gb|CW341967.1|CW341967 104_843_11486613_148_36158_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486613, DNA
sequence
Length = 703
Score = 127 bits (64), Expect = 3e-027
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 804 ggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgt 863
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ggttggcaccacggtg-taatccatggtcaacgtttcagctgtacgcttgccctcatcgt 612
Query: 864 aacagctcctgacacc 879
|||| |||||||||||
Sbjct: 611 aacaactcctgacacc 596
>gb|CW252976.1|CW252976 104_716_11224822_116_35103_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224822, DNA
sequence
Length = 627
Score = 125 bits (63), Expect = 1e-026
Identities = 135/159 (84%)
Strand = Plus / Plus
Query: 887 ttgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctca 946
|||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 156 ttgacattgccccaataagtttccacctgagggtgctggaggggatcaccatagacttca 215
Query: 947 ctggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcaga 1006
||||| || || || |||||||| || |||||||| || || || |||||||||||
Sbjct: 216 ctggtgcttgtaagtaggaaccttgccccaatcctcttggccaacccaagcatgttcagt 275
Query: 1007 gtcccaaccacattggtcttgtgctatcacaaaggttaa 1045
|||||||| ||||| ||||||||| ||| |||| |||||
Sbjct: 276 gtcccaacaacattcgtcttgtgccatctcaaaagttaa 314
>gb|BM330485.1|BM330485 PIC1_52_F06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 608
Score = 119 bits (60), Expect = 8e-025
Identities = 103/117 (88%), Gaps = 4/117 (3%)
Strand = Plus / Minus
Query: 653 tattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagt 712
|||| ||||||| || |||| ||| ||||||||||||||||||| ||||||||||||| |
Sbjct: 117 tattagaaactcatgttttgatttgcatcaccataaaccgtcaacggctccttcctcaat 58
Query: 713 gcctgagcaac----aaagttactgacaacacggccatcgtcaatgcacatgcgagg 765
|||||||||| ||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 57 tcctgagcaacaattaaagttactgacaacacagccatcatcaatgcacatgcgagg 1
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 353 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 296
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 295 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 239
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 238 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 189
>gb|BM324178.1|BM324178 PIC1_25_A12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 575
Score = 117 bits (59), Expect = 3e-024
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 957 tgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagagtcccaacca 1016
||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 575 tgaggaggaacttggcgttgatcctctttgccaatccgagcatgttcagagtgccaacca 516
Query: 1017 cattggtcttg 1027
|||||||||||
Sbjct: 515 cattggtcttg 505
>gb|CX615688.1|CX615688 GABR1_22_A05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_22_A05_A002 3', mRNA sequence
Length = 596
Score = 115 bits (58), Expect = 1e-023
Identities = 175/214 (81%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 221 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 162
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 161 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 102
Query: 477 tgtgcgggtcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgt 536
|||| || ||||| ||||| ||||||||||| || || | |||||||||||||
Sbjct: 101 tgtgtggatcgtctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgt 42
Query: 537 cctggacaaccttggcaagctcaagcatggtgaa 570
|||| || ||||| || ||||| |||||||||||
Sbjct: 41 cctgaaccaccttagccagctccagcatggtgaa 8
>gb|BI098163.1|BI098163 IP1_32_H07.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 606
Score = 113 bits (57), Expect = 5e-023
Identities = 100/114 (87%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 653 tattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagt 712
|||| ||||||| || |||| ||| ||||||||||||||||||| ||||||||||||| |
Sbjct: 114 tattagaaactcatgttttgatttgcatcaccataaaccgtcaacggctccttcctcaat 55
Query: 713 gcctgagcaac----aaagttactgacaacacggccatcgtcaatgcacatgcg 762
|||||||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct: 54 tcctgagcaacaattaaagttactgacaacacagccatcatcaatgcacatgcg 1
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 350 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 293
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 292 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 236
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 235 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 186
>gb|CD225257.1|CD225257 CCC1_39_H04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_39_H04_A007 3', mRNA sequence
Length = 602
Score = 107 bits (54), Expect = 3e-021
Identities = 186/230 (80%)
Strand = Plus / Minus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
|||||||| || ||||||||||| | ||||||| | ||||| ||||| || ||||| | |
Sbjct: 230 ccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcccgaaggggaacc 171
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
|| || ||||| || |||| ||| || |||||||||||||| |||||||||||||| ||
Sbjct: 170 ttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgcttgtgtgga 111
Query: 485 tcgtcctgggtgttcttgcggaactcgatccgtgcgttggggtcgatggtgtcctggaca 544
|| || ||||| ||||||||||| || || | ||||||||||||||||| ||
Sbjct: 110 tcatctgcagtgtttggacggaactcgatgcgcgcctctgggtcgatggtgtcctgaacc 51
Query: 545 accttggcaagctcaagcatggtgaactcgccagggttacccaggttgaa 594
||||| || ||||| ||||||||||| || ||||| ||||| ||||||||
Sbjct: 50 accttagccagctccagcatggtgaattctccaggattaccgaggttgaa 1
>gb|CF485564.1|CF485564 POL1_32_G02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_G02_A002 3', mRNA sequence
Length = 482
Score = 107 bits (54), Expect = 3e-021
Identities = 82/91 (90%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaa----agttactgacaaca 739
||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 163 cataaaccgtcaacggctccttcctcaattcctgagcaacaattaaagttactgacaaca 104
Query: 740 cggccatcgtcaatgcacatgcgagggccat 770
| |||||| ||||||||||||||||||||||
Sbjct: 103 cagccatcatcaatgcacatgcgagggccat 73
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 352 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 295
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 294 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 238
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 237 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 188
>gb|CX607990.1|CX607990 ANR1_32_A09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_A09_A002 3', mRNA sequence
Length = 750
Score = 107 bits (54), Expect = 3e-021
Identities = 82/91 (90%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaa----agttactgacaaca 739
||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 405 cataaaccgtcaacggctccttcctcaattcctgagcaacaattaaagttactgacaaca 346
Query: 740 cggccatcgtcaatgcacatgcgagggccat 770
| |||||| ||||||||||||||||||||||
Sbjct: 345 cagccatcatcaatgcacatgcgagggccat 315
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 594 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 537
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 536 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 480
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 479 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 430
>gb|CX610151.1|CX610151 ANR1_17_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_A01_A002 3', mRNA sequence
Length = 666
Score = 107 bits (54), Expect = 3e-021
Identities = 82/91 (90%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaa----agttactgacaaca 739
||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 322 cataaaccgtcaacggctccttcctcaattcctgagcaacaattaaagttactgacaaca 263
Query: 740 cggccatcgtcaatgcacatgcgagggccat 770
| |||||| ||||||||||||||||||||||
Sbjct: 262 cagccatcatcaatgcacatgcgagggccat 232
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 511 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 454
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 453 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 397
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 396 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 347
>gb|CW302720.1|CW302720 104_787_11464865_148_35670_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464865, DNA
sequence
Length = 468
Score = 99.6 bits (50), Expect = 7e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 888 tgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcac 947
||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || ||||
Sbjct: 162 tgacattgccccaataagtttccacctgagggtgctggaggggatcaccatacacttcac 221
Query: 948 tggtactggtgaggaggaacctggcgttgatcctctttgctaatccgagcatgttcagag 1007
|||| || || || |||||||| || |||||||| || || || |||||| |||| |
Sbjct: 222 tggtgcttgtaagtaggaaccttgccccaatcctcttggccaacccaagcatggtcagtg 281
Query: 1008 tcccaaccacattggtcttgtgctatcacaaaggttaa 1045
||||||| ||||| |||||| || ||| |||| |||||
Sbjct: 282 tcccaacaacattcgtcttgggccatctcaaaagttaa 319
>gb|CN127153.1|CN127153 RHOH1_21_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_H01_A002 3', mRNA sequence
Length = 833
Score = 99.6 bits (50), Expect = 7e-019
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaa----agttactgacaaca 739
||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 485 cataaaccgtcaacggctccttcctcaattcctgagcaacaattaaagttactgacaaca 426
Query: 740 cggccatcgtcaatgcacatgcgagggccat 770
| |||||| ||| ||||||||||||||||||
Sbjct: 425 cagccatcatcagtgcacatgcgagggccat 395
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 674 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 617
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 616 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 560
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 559 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 510
>gb|BE592429.1|BE592429 WS1_94_F06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 477
Score = 97.6 bits (49), Expect = 3e-018
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 163 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 104
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 103 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 44
Query: 477 tgtgcgggtcgtc 489
|||| || |||||
Sbjct: 43 tgtgtggatcgtc 31
>gb|BG464726.1|BG464726 EM1_33_C05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 299
Score = 97.6 bits (49), Expect = 3e-018
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 185 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 126
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 125 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 66
Query: 477 tgtgcgggtcgtc 489
|||| || |||||
Sbjct: 65 tgtgtggatcgtc 53
>gb|BG103207.1|BG103207 RHIZ2_19_E05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 561
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 198 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 139
Query: 417 gggggatcttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgct 476
|||| | ||| || ||||| || |||| ||| || |||||||||||||| ||||||||||
Sbjct: 138 ggggaaccttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgct 79
Query: 477 tgtg 480
||||
Sbjct: 78 tgtg 75
>gb|CW045199.1|CW045199 104_281_10509415_114_30238 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509415, DNA
sequence
Length = 641
Score = 93.7 bits (47), Expect = 4e-017
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1389 tcagatcacagctatagctttcgctagtacgtttttccctgtttcaaatgcacgggaaaa 1448
|||||||||||||||| |||| |||||||||||||| ||| ||| ||| | |||||||||
Sbjct: 1 tcagatcacagctataccttttgctagtacgttttt-cctatttgaaacgtacgggaaaa 59
Query: 1449 tgcagcaagcattcagaagcataaaaa 1475
||||| ||||||||||||||||||||
Sbjct: 60 tgcagtcagcattcagaagcataaaaa 86
>gb|BI098154.1|BI098154 IP1_32_G07.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 91.7 bits (46), Expect = 2e-016
Identities = 86/99 (86%), Gaps = 4/99 (4%)
Strand = Plus / Minus
Query: 653 tattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagt 712
|||| ||||||| || |||| ||| ||||||||||||||||||| ||||||||||||| |
Sbjct: 101 tattagaaactcatgttttgatttgcatcaccataaaccgtcaacggctccttcctcaat 42
Query: 713 gcctgagcaac----aaagttactgacaacacggccatc 747
|||||||||| ||||||||||||||||| ||||||
Sbjct: 41 tcctgagcaacaattaaagttactgacaacacagccatc 3
Score = 71.9 bits (36), Expect = 2e-010
Identities = 144/172 (83%), Gaps = 11/172 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 337 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 280
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 279 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 223
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttccgg 339
||||||||| | ||| |||| |||||||| |||||||||||||||||||
Sbjct: 222 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttccgg 173
>gb|CW264923.1|CW264923 104_734_11231578_116_35258_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231578, DNA
sequence
Length = 684
Score = 89.7 bits (45), Expect = 7e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 877 accgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcacc 936
||||||||| ||||| || |||||||| |||||||||||||||||||| || || || ||
Sbjct: 141 accgatggggttgacgtttccccagtaggtctccacctgcgggtgctgcagcgggtcgcc 82
Query: 937 atagacctcactggtactggtgaggaggaacctggcg 973
|| ||||| ||||| |||||||| ||||||||||||
Sbjct: 81 gtacacctcgctggtgctggtgagcaggaacctggcg 45
Score = 63.9 bits (32), Expect = 4e-008
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||| |||||||| | |||||||| |||||||||| ||| || || || ||||||||
Sbjct: 354 aacctcgaggttggctgcgcggtggtagtccatggtcagcgtctccgccgtgcgcttgcc 295
Query: 856 ctcatcgtaacagctcctgacacc 879
||| ||||| ||||||| ||||||
Sbjct: 294 ctcgtcgtagcagctccggacacc 271
Score = 40.1 bits (20), Expect = 0.57
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagata 784
||||| ||||| || ||||| |||| ||||||||||| || || || || ||||||||
Sbjct: 561 aagttgctgacgacccggccgtcgttgatgcacatgcgcggcccgtacgtgttgaagatc 502
Query: 785 cgtgcgatcctaacct 800
|| |||||||| ||||
Sbjct: 501 cgggcgatcctcacct 486
>gb|CN125411.1|CN125411 RHOH1_10_H10.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_10_H10_A002 5', mRNA sequence
Length = 754
Score = 87.7 bits (44), Expect = 3e-015
Identities = 101/120 (84%)
Strand = Plus / Minus
Query: 908 tccacctgcgggtgctggagaggatcaccatagacctcactggtactggtgaggaggaac 967
|||||||| ||||||||||| |||||||||||||| |||||||| || || || ||||||
Sbjct: 754 tccacctgagggtgctggaggggatcaccatagacttcactggtgcttgtaagtaggaac 695
Query: 968 ctggcgttgatcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|| || |||||||| || || || ||||||||||| |||||||| ||||| ||||||
Sbjct: 694 cttgccccaatcctcttggccaacccaagcatgttcagtgtcccaacaacattcgtcttg 635
>gb|BZ349935.1|BZ349935 hr47e03.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr47e03 5', DNA sequence
Length = 550
Score = 83.8 bits (42), Expect = 4e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 880 gatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||| ||||| || |||||||| |||||||||||||||||||| || || || || ||
Sbjct: 400 gatggggttgacgtttccccagtaggtctccacctgcgggtgctgcagcgggtcgccgta 459
Query: 940 gacctcactggtactggtgaggaggaacctggcg 973
||||| ||||| |||||||| ||||||||||||
Sbjct: 460 cacctcgctggtgctggtgagcaggaacctggcg 493
Score = 63.9 bits (32), Expect = 4e-008
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||| |||||||| | |||||||| |||||||||| ||| || || || ||||||||
Sbjct: 183 aacctcgaggttggctgcgcggtggtagtccatggtcagcgtctccgccgtgcgcttgcc 242
Query: 856 ctcatcgtaacagctcctgacacc 879
||| ||||| ||||||| ||||||
Sbjct: 243 ctcgtcgtagcagctccggacacc 266
>gb|CW241292.1|CW241292 104_700_11218687_116_37545_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218687, DNA
sequence
Length = 593
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
||||||||||| |||||||||| ||||||||| || || ||||| || || || | |
Sbjct: 427 ccgaagatgcgggcgcggaagtcgtggaccatgagcgggagtccctcgcggagcggcacc 486
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
|| || |||||||| || | || |||||||||| ||||||| ||||||||||||||||||
Sbjct: 487 ttgggctcccaccccagcagctgcttggcgcgggtgatgtccggcttgcgcttgtgcggg 546
Query: 485 tcgtc 489
|||||
Sbjct: 547 tcgtc 551
>gb|CW241293.1|CW241293 104_700_11218687_148_37542_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218687, DNA
sequence
Length = 611
Score = 81.8 bits (41), Expect = 2e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
||||||||||| |||||||||| ||||||||| || || ||||| || || || | |
Sbjct: 186 ccgaagatgcgggcgcggaagtcgtggaccatgagcgggagtccctcgcggagcggcacc 127
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcggg 484
|| || |||||||| || | || |||||||||| ||||||| ||||||||||||||||||
Sbjct: 126 ttgggctcccaccccagcagctgcttggcgcgggtgatgtccggcttgcgcttgtgcggg 67
Query: 485 tcgtc 489
|||||
Sbjct: 66 tcgtc 62
>gb|CD213228.1|CD213228 HS1_29_A02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_A02_A012 3', mRNA sequence
Length = 570
Score = 79.8 bits (40), Expect = 7e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 365 ccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatc 424
|||||||| || ||||||||||| | ||||||| | ||||| ||||| || ||||| | |
Sbjct: 201 ccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcccgaaggggaacc 142
Query: 425 ttcggttcccacccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtg 480
|| || ||||| || |||| ||| || |||||||||||||| ||||||||||||||
Sbjct: 141 ttgggctcccagccaaggagctcttttgcgcggctgatgtcaggcttgcgcttgtg 86
>gb|CL176063.1|CL176063 104_382_10892872_116_31763_088 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892872, DNA
sequence
Length = 726
Score = 77.8 bits (39), Expect = 3e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 809 gcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacag 868
||||||||||||||||||||||| | ||||||||||| | ||| |||||||| ||||||
Sbjct: 276 gcaccacggtggtaatccatggtaagagtttcagctgttctcttcccctcatcataacag 335
Query: 869 ctcctgacacc 879
||||| |||||
Sbjct: 336 ctcctaacacc 346
Score = 60.0 bits (30), Expect = 6e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 875 acaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatca 934
||||| ||||||||||||| ||||||||| ||||| ||| || |||| ||||||||
Sbjct: 437 acacctatgggattgacatggccccagtagctctccttctgtggatgctcaagaggatcg 496
Query: 935 ccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccg 994
||||| || ||||||||||| || || | ||||| ||| || ||||||||| | |||
Sbjct: 497 ccatacacttcactggtactagtcagcaagaaccgggccccgaccctctttgccagtcca 556
Query: 995 agcatgttca 1004
||||||||||
Sbjct: 557 agcatgttca 566
>gb|CW141686.1|CW141686 104_532_11136444_148_34929_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136444, DNA
sequence
Length = 653
Score = 77.8 bits (39), Expect = 3e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 809 gcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacag 868
||||||||||||||||||||||| | ||||||||||| | ||| |||||||| ||||||
Sbjct: 11 gcaccacggtggtaatccatggtaagagtttcagctgttctcttcccctcatcataacag 70
Query: 869 ctcctgacacc 879
||||| |||||
Sbjct: 71 ctcctaacacc 81
Score = 60.0 bits (30), Expect = 6e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 875 acaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatca 934
||||| ||||||||||||| ||||||||| ||||| ||| || |||| ||||||||
Sbjct: 172 acacctatgggattgacatggccccagtagctctccttctgtggatgctcaagaggatcg 231
Query: 935 ccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccg 994
||||| || ||||||||||| || || | ||||| ||| || ||||||||| | |||
Sbjct: 232 ccatacacttcactggtactagtcagcaagaaccgggccccgaccctctttgccagtcca 291
Query: 995 agcatgttca 1004
||||||||||
Sbjct: 292 agcatgttca 301
>gb|AW672136.1|AW672136 LG1_357_D04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 114 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 58
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 248 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 207
>gb|BG050791.1|BG050791 FM1_70_F06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 464
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 346 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 290
>gb|BG239908.1|BG239908 OV1_30_E11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 65.9 bits (33), Expect = 1e-008
Identities = 141/169 (83%), Gaps = 11/169 (6%)
Strand = Plus / Minus
Query: 172 gaatggcattacagcatcagccgaggtattccagtaacacattcccaacgaactacgtgg 231
|||| ||||||||||| || | ||||||| |||| ||||||| |||| ||||||| ||
Sbjct: 497 gaatagcattacagcaccaac--aggtatttcagtgacacatttccaaagaactacaagg 440
Query: 232 cc-catagc--ttttgtcagtaaggagagagcaaccaagcagctagaagcagggccacca 288
|| |||||| ||||||| ||||| | ||||||||||||||||||||| | ||||||||
Sbjct: 439 ccgcatagcttttttgtctgtaag--gggagcaaccaagcagctagaagta-ggccacca 383
Query: 289 aaaatttcc-atgtcatgtgcgctccttcatcctaaccttgctggtttc 336
||||||||| | ||| |||| |||||||| ||||||||||||||||
Sbjct: 382 aaaatttcctaagtctcatgcg--ccttcatcataaccttgctggtttc 336
>gb|BG322453.1|BG322453 EM1_28_B08.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 168 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 112
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 302 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 261
>gb|BI098408.1|BI098408 IP1_32_A01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 468
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 316 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 260
Score = 38.2 bits (19), Expect = 2.3
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| ||||| || |||||||||||||| ||||||
Sbjct: 447 tgagcaatgaagttgctaacaacacggccatcatcaatg 409
>gb|BI211916.1|BI211916 IP1_62_A09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 480
Score = 65.9 bits (33), Expect = 1e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 709 cagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggcc 768
||||||||| |||||||| || ||||| || |||||||| || | |||||| ||||| ||
Sbjct: 471 cagtgcctgtgcaacaaaattgctgacgacgcggccatcatcgaggcacatacgaggacc 412
Query: 769 atatgtattgaagatacgtgc 789
|||||||||||| || |||||
Sbjct: 411 atatgtattgaaaatgcgtgc 391
>gb|BI245833.1|BI245833 IP1_64_A10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 481
Score = 65.9 bits (33), Expect = 1e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 709 cagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggcc 768
||||||||| |||||||| || ||||| || |||||||| || | |||||| ||||| ||
Sbjct: 471 cagtgcctgtgcaacaaaattgctgacgacgcggccatcatcgaggcacatacgaggacc 412
Query: 769 atatgtattgaagatacgtgc 789
|||||||||||| || |||||
Sbjct: 411 atatgtattgaaaatgcgtgc 391
>gb|CD231000.1|CD231000 SS1_7_A08.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_A08_A012 5', mRNA sequence
Length = 718
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 639 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 583
>gb|CD231740.1|CD231740 SS1_23_B08.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_B08_A012 5', mRNA sequence
Length = 649
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 646 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 590
>gb|CD231767.1|CD231767 SS1_23_F08.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_F08_A012 5', mRNA sequence
Length = 720
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 649 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 593
>gb|CF427742.1|CF427742 PH1_10_E03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_10_E03_A002 5', mRNA sequence
Length = 756
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 652 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 596
>gb|CF430354.1|CF430354 PH1_27_G09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_G09_A002 5', mRNA sequence
Length = 794
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 665 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 609
>gb|CF430487.1|CF430487 PH1_28_A03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_A03_A002 5', mRNA sequence
Length = 785
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 656 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 600
>gb|CF432706.1|CF432706 NIT1_18_B01.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_B01_A002 5', mRNA sequence
Length = 554
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 552 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 496
>gb|CF433668.1|CF433668 NIT1_28_C11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_C11_A002 5', mRNA sequence
Length = 774
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 642 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 586
>gb|CF433901.1|CF433901 NIT1_30_D07.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_30_D07_A002 5', mRNA sequence
Length = 655
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 597 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 541
>gb|CF434004.1|CF434004 NIT1_31_D06.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_D06_A002 5', mRNA sequence
Length = 757
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 657 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 601
>gb|CF755793.1|CF755793 DSAF1_1_H08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_1_H08_A011 5', mRNA sequence
Length = 490
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 69 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 13
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 203 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 162
>gb|CN125876.1|CN125876 RHOH1_13_H02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_H02_A002 5', mRNA sequence
Length = 798
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 622 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 566
Score = 38.2 bits (19), Expect = 2.3
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| ||||| || |||||||||||||| ||||||
Sbjct: 753 tgagcaatgaagttgctaacaacacggccatcatcaatg 715
>gb|CN128624.1|CN128624 RHOH1_30_D09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_D09_A002 5', mRNA sequence
Length = 883
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 633 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 577
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 767 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 726
>gb|CN141132.1|CN141132 OX1_49_B06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_B06_A002 5', mRNA sequence
Length = 767
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 633 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 577
Score = 38.2 bits (19), Expect = 2.3
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatg 754
||||||| ||||| || |||||||||||||| ||||||
Sbjct: 764 tgagcaatgaagttgctaacaacacggccatcatcaatg 726
>gb|CX611949.1|CX611949 ANR1_27_D08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_D08_A002 5', mRNA sequence
Length = 792
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 632 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 576
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 766 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 725
>gb|CX615385.1|CX615385 GABR1_19_G09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_G09_A002 5', mRNA sequence
Length = 699
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 646 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 590
>gb|CX615535.1|CX615535 GABR1_20_E09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_E09_A002 5', mRNA sequence
Length = 805
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 632 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 576
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 766 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 725
>gb|CX618964.1|CX618964 GABR1_42_E12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_42_E12_A002 5', mRNA sequence
Length = 626
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 623 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 567
>gb|CX622038.1|CX622038 GABR1_61_D10.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_D10_A002 5', mRNA sequence
Length = 786
Score = 65.9 bits (33), Expect = 1e-008
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || ||||||||||||||
Sbjct: 632 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgccccagta 576
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 766 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 725
>gb|BE592553.1|BE592553 WS1_94_F06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 153
Score = 63.9 bits (32), Expect = 4e-008
Identities = 95/115 (82%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 377 ttgcggaagtcggagaccatgaggggaaggccctcacgcagggggatcttcggttccca- 435
||||||||||| | ||||||| | ||||| |||||||| ||||| | ||| || ||||
Sbjct: 145 ttgcggaagtcagtgaccatgcgaggaagaccctcacgaaggggaaccttgggctcccca 86
Query: 436 -cccgaggaactccttggcgcggctgatgtcgggcttgcgcttgtgcgggtcgtc 489
||| |||| ||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 85 gcccaaggagctcttttgcgcggctgatgtcaggcttgcgcttgtgtggatcgtc 31
>gb|CF771082.1|CF771082 DSBF1_13_F08.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_13_F08_A010 3', mRNA sequence
Length = 153
Score = 63.9 bits (32), Expect = 4e-008
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 62 caacaaagaattagatcatcctggtttatctccaactgttcaactgaa 109
||||||| ||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 149 caacaaaaaattaaatcatccgggtttatctccaacggttcaactgaa 102
Score = 50.1 bits (25), Expect = 6e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 178 cattacagcatcagccgaggtattccagtaacacattccca 218
||||||||||||| || ||| ||| ||||||||||||||||
Sbjct: 41 cattacagcatcaaccaaggaatttcagtaacacattccca 1
>gb|CW141685.1|CW141685 104_532_11136444_116_34933_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136444, DNA
sequence
Length = 663
Score = 60.0 bits (30), Expect = 6e-007
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 875 acaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatca 934
||||| ||||||||||||| ||||||||| ||||| ||| || |||| ||||||||
Sbjct: 573 acacctatgggattgacatggccccagtagctctccttctgtggatgctcaagaggatcg 514
Query: 935 ccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccg 994
||||| || ||||||||||| || || | ||||| ||| || ||||||||| | |||
Sbjct: 513 ccatacacttcactggtactagtcagcaagaaccgggccccgaccctctttgccagtcca 454
Query: 995 agcatgttca 1004
||||||||||
Sbjct: 453 agcatgttca 444
>gb|CW251424.1|CW251424 104_714_11223922_116_35069_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223922, DNA
sequence
Length = 678
Score = 60.0 bits (30), Expect = 6e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 875 acaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatca 934
||||| ||||||||||||| ||||||||| ||||| ||| || |||| ||||||||
Sbjct: 90 acacctatgggattgacatggccccagtagctctccttctgtggatgctcaagaggatcg 149
Query: 935 ccatagacctcactggtactggtgaggaggaacctggcgttgatcctctttgctaatccg 994
||||| || ||||||||||| || || | ||||| ||| || ||||||||| | |||
Sbjct: 150 ccatacacttcactggtactagtcagcaagaaccgggccccgaccctctttgccagtcca 209
Query: 995 agcatgttca 1004
||||||||||
Sbjct: 210 agcatgttca 219
>gb|CX606371.1|CX606371 ANR1_2_D11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_D11_A002 5', mRNA sequence
Length = 806
Score = 60.0 bits (30), Expect = 6e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccca 900
|||||| |||||||| ||||||||||||||||| || || || |||||||||||
Sbjct: 632 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgcccca 579
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 766 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 725
>gb|CD222221.1|CD222221 CCC1_2_E05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E05_A007 5', mRNA sequence
Length = 652
Score = 58.0 bits (29), Expect = 2e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| ||||||||||||||||| || || || || |||||||||||
Sbjct: 603 acgcttaccctcatcataacagctcctgacaccaattgggttaacgttgccccagta 547
>gb|CF430476.1|CF430476 PH1_28_D01.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_D01_A002 5', mRNA sequence
Length = 751
Score = 58.0 bits (29), Expect = 2e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| || |||||||||||||| || || || ||||||||||||||
Sbjct: 623 acgcttaccctcatcatagcagctcctgacaccaattgggttaacattgccccagta 567
Score = 36.2 bits (18), Expect = 8.9
Identities = 27/30 (90%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatg 754
||||| || |||||||||||||| ||||||
Sbjct: 745 aagttgctaacaacacggccatcatcaatg 716
>gb|CX607777.1|CX607777 ANR1_30_E03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_E03_A002 5', mRNA sequence
Length = 633
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgcccc 899
|||||| |||||||| ||||||||||||||||| || || || ||||||||||
Sbjct: 631 acgcttaccctcatcataacagctcctgacaccaattgggttaacattgcccc 579
>gb|BZ332079.1|BZ332079 hx25c04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx25c04 5', DNA sequence
Length = 599
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 357 cttggtcgccgaagatgcgcttgcggaagtcggagaccatgaggggaaggccctcacgca 416
||||||| |||||||| || ||||||||||| | ||||||| | ||||| |||||||| |
Sbjct: 76 cttggtccccgaagatacgtttgcggaagtcagtgaccatgcgaggaagaccctcacgaa 17
Query: 417 gggg 420
||||
Sbjct: 16 gggg 13
>gb|CD232602.1|CD232602 SS1_46_E09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_46_E09_A012 5', mRNA sequence
Length = 709
Score = 50.1 bits (25), Expect = 6e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| ||| |||| ||||||||||||||||| || || || |||||||| |||||
Sbjct: 650 acgcttacccccatcataacagctcctgacaccaattgggttaacattgcctcagta 594
>gb|CD429345.1|CD429345 ETH1_4_B06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_4_B06_A002 3', mRNA sequence
Length = 723
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 635 tcaaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaac 690
|||| |||||| ||||||||||| ||||| | || || |||||||||||||||||
Sbjct: 57 tcaatcagatctgaaacatattgaaaacttcgagtctgttttccatcaccataaac 2
>gb|CX623284.1|CX623284 GABR1_68_F11.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F11_A002 5', mRNA sequence
Length = 690
Score = 46.1 bits (23), Expect = 0.009
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 977 atcctctttgctaatccgagcatgttcagagtcccaaccacattggtcttg 1027
|||||||| || || || ||||||||||| |||||||| ||||| ||||||
Sbjct: 685 atcctcttggccaacccaagcatgttcagtgtcccaacaacattcgtcttg 635
>gb|CW264924.1|CW264924 104_734_11231578_148_35262_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231578, DNA
sequence
Length = 719
Score = 44.1 bits (22), Expect = 0.037
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 656 tggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcc 715
||||| ||||| || ||||| || || || || ||||||||||| ||||||||||| |||
Sbjct: 657 tggaagctcctcgtctgcttgccgtcgccgtacaccgtcaagggatccttcctcagcgcc 716
Query: 716 tg 717
||
Sbjct: 717 tg 718
>gb|CW293212.1|CW293212 104_773_11414527_116_35587_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414527, DNA
sequence
Length = 605
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 167 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 126
>gb|BE360625.1|BE360625 DG1_64_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 489
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 79 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 38
>gb|BE597954.1|BE597954 PI1_67_E07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 49 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 8
>gb|BG048443.1|BG048443 OV1_13_D12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 48 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 7
>gb|BG101912.1|BG101912 RHIZ2_21_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 629
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 53 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 12
>gb|BG355671.1|BG355671 EM1_16_F10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 668
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 9
>gb|BG410969.1|BG410969 EM1_28_B08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 685
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 49 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 8
>gb|BG557917.1|BG557917 EM1_39_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 9
>gb|CD230979.1|CD230979 SS1_7_A08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_A08_A012 3', mRNA sequence
Length = 660
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 58 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 17
>gb|CD231720.1|CD231720 SS1_23_B08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_B08_A012 3', mRNA sequence
Length = 651
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 104 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 63
>gb|CD231960.1|CD231960 SS1_31_G04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_31_G04_A012 3', mRNA sequence
Length = 528
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 48 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 7
>gb|CD235212.1|CD235212 SS1_28_D12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_D12_A012 3', mRNA sequence
Length = 691
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 107 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 66
>gb|CF071290.1|CF071290 FE1_16_D06.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_D06_A002 5', mRNA sequence
Length = 683
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 636 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 677
>gb|CF429793.1|CF429793 PH1_24_F01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_24_F01_A002 3', mRNA sequence
Length = 661
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 48 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 7
>gb|CF430220.1|CF430220 PH1_27_G09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_G09_A002 3', mRNA sequence
Length = 689
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 9
>gb|CF433612.1|CF433612 NIT1_28_C11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_C11_A002 3', mRNA sequence
Length = 747
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 102 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 61
>gb|CF433976.1|CF433976 NIT1_31_D06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_D06_A002 3', mRNA sequence
Length = 685
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 9
>gb|CN141047.1|CN141047 OX1_49_B06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_B06_A002 3', mRNA sequence
Length = 792
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 147 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 106
>gb|CX611862.1|CX611862 ANR1_27_D08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_D08_A002 3', mRNA sequence
Length = 764
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 133 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 92
>gb|CX615302.1|CX615302 GABR1_19_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_G09_A002 3', mRNA sequence
Length = 714
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 84 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 43
>gb|CX615450.1|CX615450 GABR1_20_E09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_E09_A002 3', mRNA sequence
Length = 690
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 9
>gb|CX618883.1|CX618883 GABR1_42_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_42_E12_A002 3', mRNA sequence
Length = 692
Score = 44.1 bits (22), Expect = 0.037
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatcgtcaatg 754
|||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 48 gcctgagcaatgaagttgctaacaacacggccatcatcaatg 7
>gb|CX622936.1|CX622936 GABR1_66_G03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_G03_A002 5', mRNA sequence
Length = 685
Score = 42.1 bits (21), Expect = 0.14
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 995 agcatgttcagagtcccaaccacattggtcttg 1027
||||||||||| |||||||| ||||| ||||||
Sbjct: 675 agcatgttcagtgtcccaacaacattcgtcttg 643
>gb|AW679739.1|AW679739 WS1_31_D05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 103
Score = 40.1 bits (20), Expect = 0.57
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 314 ttcatcctaaccttgctggtttcc 337
||||||||||||||| ||||||||
Sbjct: 70 ttcatcctaaccttggtggtttcc 47
>gb|CW110695.1|CW110695 104_483_11103860_116_34518_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103860, DNA
sequence
Length = 633
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1022 gtcttgtgctatcacaaag 1040
|||||||||||||||||||
Sbjct: 258 gtcttgtgctatcacaaag 240
>gb|CW163651.1|CW163651 104_571_11151575_116_36453_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151575, DNA
sequence
Length = 728
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1169 aaatttcgtgaagtgaaca 1187
|||||||||||||||||||
Sbjct: 102 aaatttcgtgaagtgaaca 120
>gb|CW233441.1|CW233441 104_686_11213425_116_37369_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213425, DNA
sequence
Length = 617
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1010 ccaaccacattggtcttgt 1028
|||||||||||||||||||
Sbjct: 349 ccaaccacattggtcttgt 331
>gb|CW261484.1|CW261484 104_728_11229536_148_35173_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229536, DNA
sequence
Length = 543
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1284 taagcaaagtacataacta 1302
|||||||||||||||||||
Sbjct: 408 taagcaaagtacataacta 390
>gb|CW293213.1|CW293213 104_773_11414527_148_35591_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414527, DNA
sequence
Length = 656
Score = 38.2 bits (19), Expect = 2.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| ||||| || ||||||||||||||
Sbjct: 618 gcctgagcaatgaagttgctaacaacacggccatc 652
>gb|CW296776.1|CW296776 104_778_11461695_148_35632_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461695, DNA
sequence
Length = 729
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1020 tggtcttgtgctatcacaa 1038
|||||||||||||||||||
Sbjct: 66 tggtcttgtgctatcacaa 84
>gb|CW327338.1|CW327338 104_823_11478693_116_35975_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478693, DNA
sequence
Length = 623
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1169 aaatttcgtgaagtgaaca 1187
|||||||||||||||||||
Sbjct: 178 aaatttcgtgaagtgaaca 196
>gb|CW395426.1|CW395426 fsbb001f083h07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083h07, DNA
sequence
Length = 824
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1022 gtcttgtgctatcacaaag 1040
|||||||||||||||||||
Sbjct: 556 gtcttgtgctatcacaaag 574
>gb|CW411599.1|CW411599 fsbb001f106n12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106n12, DNA
sequence
Length = 813
Score = 38.2 bits (19), Expect = 2.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1022 gtcttgtgctatcacaaag 1040
|||||||||||||||||||
Sbjct: 380 gtcttgtgctatcacaaag 398
>gb|BG050630.1|BG050630 FM1_70_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 580
Score = 38.2 bits (19), Expect = 2.3
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| ||||| || ||||||||||||||
Sbjct: 37 gcctgagcaatgaagttgctaacaacacggccatc 3
>gb|CF432658.1|CF432658 NIT1_18_B01.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_B01_A002 3', mRNA sequence
Length = 667
Score = 38.2 bits (19), Expect = 2.3
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| ||||| || ||||||||||||||
Sbjct: 39 gcctgagcaatgaagttgctaacaacacggccatc 5
>gb|CX607692.1|CX607692 ANR1_30_E03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_E03_A002 3', mRNA sequence
Length = 670
Score = 38.2 bits (19), Expect = 2.3
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 713 gcctgagcaacaaagttactgacaacacggccatc 747
|||||||||| ||||| || ||||||||||||||
Sbjct: 50 gcctgagcaatgaagttgctaacaacacggccatc 16
>gb|CL163003.1|CL163003 104_355_10806822_114_31832_342 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806822, DNA
sequence
Length = 732
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 553 aagctcaagcatggtgaa 570
||||||||||||||||||
Sbjct: 607 aagctcaagcatggtgaa 624
>gb|CL163004.1|CL163004 104_355_10806822_116_31833_342 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806822, DNA
sequence
Length = 752
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 553 aagctcaagcatggtgaa 570
||||||||||||||||||
Sbjct: 566 aagctcaagcatggtgaa 549
>gb|CW026749.1|CW026749 104_253_10498126_114_30531 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498126, DNA
sequence
Length = 634
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 35 tataccatatatatgatg 52
||||||||||||||||||
Sbjct: 618 tataccatatatatgatg 601
>gb|CW118685.1|CW118685 104_495_11108343_148_34700_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108343, DNA
sequence
Length = 619
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 647 gaaacatattggaaactc 664
||||||||||||||||||
Sbjct: 296 gaaacatattggaaactc 279
>gb|CW135742.1|CW135742 104_520_11118008_148_34833_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118008, DNA
sequence
Length = 693
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 35 tataccatatatatgatg 52
||||||||||||||||||
Sbjct: 123 tataccatatatatgatg 106
>gb|CW137557.1|CW137557 104_525_11119735_116_34876_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119735, DNA
sequence
Length = 599
Score = 36.2 bits (18), Expect = 8.9
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 293 tttccatgtcatgtgcgctcct 314
||||||| ||||||||||||||
Sbjct: 276 tttccatttcatgtgcgctcct 255
>gb|CW161472.1|CW161472 104_568_11150433_116_36433_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150433, DNA
sequence
Length = 728
Score = 36.2 bits (18), Expect = 8.9
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 749 tcaatgcacatgcgagggccat 770
|||||||||||| |||||||||
Sbjct: 117 tcaatgcacatgtgagggccat 96
>gb|CW168998.1|CW168998 104_578_11154443_116_36599_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154443, DNA
sequence
Length = 598
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1122 ttacattgctactccaca 1139
||||||||||||||||||
Sbjct: 205 ttacattgctactccaca 222
>gb|CW274744.1|CW274744 104_747_11404590_148_35373_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404590, DNA
sequence
Length = 726
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 553 aagctcaagcatggtgaa 570
||||||||||||||||||
Sbjct: 649 aagctcaagcatggtgaa 632
>gb|CW324460.1|CW324460 104_819_11477175_116_35916_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477175, DNA
sequence
Length = 502
Score = 36.2 bits (18), Expect = 8.9
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1055 gaaccatctcaagaaagcaaaa 1076
||||||||| ||||||||||||
Sbjct: 393 gaaccatctgaagaaagcaaaa 372
>gb|CW324461.1|CW324461 104_819_11477175_148_35912_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477175, DNA
sequence
Length = 714
Score = 36.2 bits (18), Expect = 8.9
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1055 gaaccatctcaagaaagcaaaa 1076
||||||||| ||||||||||||
Sbjct: 364 gaaccatctgaagaaagcaaaa 385
>gb|CW394711.1|CW394711 fsbb001f082h02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082h02, DNA
sequence
Length = 662
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 553 aagctcaagcatggtgaa 570
||||||||||||||||||
Sbjct: 602 aagctcaagcatggtgaa 619
>gb|CW394712.1|CW394712 fsbb001f082h02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f082h02, DNA
sequence
Length = 743
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 553 aagctcaagcatggtgaa 570
||||||||||||||||||
Sbjct: 510 aagctcaagcatggtgaa 493
>gb|CW399450.1|CW399450 fsbb001f089e19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f089e19, DNA
sequence
Length = 662
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1250 gttgaaaattgaaatgcg 1267
||||||||||||||||||
Sbjct: 508 gttgaaaattgaaatgcg 491
>gb|CW399451.1|CW399451 fsbb001f089e19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f089e19, DNA
sequence
Length = 766
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1250 gttgaaaattgaaatgcg 1267
||||||||||||||||||
Sbjct: 469 gttgaaaattgaaatgcg 486
>gb|CW450384.1|CW450384 fsbb001f188p23f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188p23, DNA
sequence
Length = 512
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 35 tataccatatatatgatg 52
||||||||||||||||||
Sbjct: 176 tataccatatatatgatg 193
>gb|CW461978.1|CW461978 fsbb001f209o07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209o07, DNA
sequence
Length = 781
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1245 gtgttgttgaaaattgaa 1262
||||||||||||||||||
Sbjct: 432 gtgttgttgaaaattgaa 415
>gb|CW492193.1|CW492193 fsbb001f282g01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282g01, DNA
sequence
Length = 783
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1250 gttgaaaattgaaatgcg 1267
||||||||||||||||||
Sbjct: 318 gttgaaaattgaaatgcg 335
>gb|BF586115.1|BF586115 FM1_26_H03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 546
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 584 cccaggttgaatggcccc 601
||||||||||||||||||
Sbjct: 169 cccaggttgaatggcccc 152
>gb|CN150172.1|CN150172 WOUND1_67_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_67_A06_A002 5', mRNA sequence
Length = 664
Score = 36.2 bits (18), Expect = 8.9
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 455 cggctgatgtcgggcttg 472
||||||||||||||||||
Sbjct: 273 cggctgatgtcgggcttg 290
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 351,545
Number of Sequences: 832831
Number of extensions: 351545
Number of successful extensions: 99191
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98664
Number of HSP's gapped (non-prelim): 391
length of query: 1475
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1455
effective length of database: 474,703,049
effective search space: 690692936295
effective search space used: 690692936295
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)