BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.28
(3878 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 1310 0.0
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 1025 0.0
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 989 0.0
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 912 0.0
gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-tre... 797 0.0
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 688 0.0
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 644 0.0
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 624 e-176
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 615 e-173
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 605 e-170
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 559 e-157
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 537 e-150
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 509 e-142
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 502 e-139
gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle... 470 e-130
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 468 e-129
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 454 e-125
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 446 e-123
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 440 e-121
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 440 e-121
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 424 e-116
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 418 e-114
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 416 e-114
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 404 e-110
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 398 e-108
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 396 e-108
gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation... 381 e-103
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 353 8e-095
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 349 1e-093
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 341 3e-091
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 325 2e-086
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 325 2e-086
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 321 3e-085
gb|CW462662.1|CW462662 fsbb001f210o15f0 Sorghum methylation... 319 1e-084
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 319 1e-084
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 307 4e-081
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 307 4e-081
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 305 2e-080
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 295 2e-077
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 293 6e-077
gb|CL155293.1|CL155293 104_341_10782024_116_31472_120 Sorgh... 250 8e-064
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 244 5e-062
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 242 2e-061
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 236 1e-059
gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient se... 236 1e-059
gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Me... 234 5e-059
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 232 2e-058
gb|CD423780.1|CD423780 SA1_1_G10.b1_A002 Salicylic acid-tre... 232 2e-058
gb|BG103613.1|BG103613 RHIZ2_38_G01.g1_A003 Rhizome2 (RHIZ2... 228 3e-057
gb|BG947728.1|BG947728 IP1_8_D05.g1_A002 Immature pannicle ... 228 3e-057
gb|BM331086.1|BM331086 PIC1_69_D12.g1_A002 Pathogen-infecte... 228 3e-057
gb|BM331095.1|BM331095 PIC1_69_E12.g1_A002 Pathogen-infecte... 228 3e-057
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 220 7e-055
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 220 7e-055
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 220 7e-055
gb|CF432674.1|CF432674 NIT1_18_C04.b1_A002 Nitrogen-deficie... 220 7e-055
gb|CN152146.1|CN152146 WOUND1_80_C12.b1_A002 Wounded leaves... 220 7e-055
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 218 3e-054
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 218 3e-054
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 212 2e-052
gb|CW431890.1|CW431890 fsbb001f146f11k0 Sorghum methylation... 206 1e-050
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 206 1e-050
gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sor... 202 2e-049
gb|BM331336.1|BM331336 PIC1_64_G10.g1_A002 Pathogen-infecte... 202 2e-049
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 198 3e-048
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 198 3e-048
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 194 4e-047
gb|BZ422160.1|BZ422160 id50c12.b1 WGS-SbicolorF (DH5a methy... 184 4e-044
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 174 4e-041
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 172 2e-040
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 170 6e-040
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 170 6e-040
gb|CW319522.1|CW319522 104_812_11474531_148_35892_046 Sorgh... 167 1e-038
gb|BI099413.1|BI099413 IP1_41_G10.g1_A002 Immature pannicle... 167 1e-038
gb|CF074115.1|CF074115 FE1_21_C05.b1_A002 Iron-deficient se... 161 6e-037
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 159 2e-036
gb|CX621309.1|CX621309 GABR1_57_H04.b1_A002 GA- or brassino... 149 2e-033
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 139 2e-030
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 137 9e-030
gb|BG051319.1|BG051319 FM1_55_A02.g1_A003 Floral-Induced Me... 133 1e-028
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 125 3e-026
gb|CW068735.1|CW068735 104_317_10525278_1_30096 Sorghum met... 123 1e-025
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 119 2e-024
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 119 2e-024
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 119 2e-024
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 119 2e-024
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 119 2e-024
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 119 2e-024
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 119 2e-024
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 119 2e-024
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 119 2e-024
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 119 2e-024
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 119 2e-024
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 117 8e-024
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 117 8e-024
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 117 8e-024
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 117 8e-024
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 117 8e-024
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 117 8e-024
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 117 8e-024
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 115 3e-023
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 115 3e-023
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 115 3e-023
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 109 2e-021
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 103 1e-019
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 101 5e-019
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 101 5e-019
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 98 7e-018
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 98 7e-018
gb|CD461570.1|CD461570 SA1_33_E06.b1_A002 Salicylic acid-tr... 98 7e-018
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 96 3e-017
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 94 1e-016
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 94 1e-016
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 94 1e-016
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 90 2e-015
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 90 2e-015
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 90 2e-015
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 90 2e-015
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 90 2e-015
gb|CF428687.1|CF428687 PH1_17_F11.b1_A002 Phosphorous-defic... 90 2e-015
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 88 7e-015
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 88 7e-015
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 88 7e-015
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 88 7e-015
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 88 7e-015
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 86 3e-014
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 86 3e-014
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 86 3e-014
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 86 3e-014
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 86 3e-014
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 86 3e-014
gb|BF421749.1|BF421749 FM1_16_B07.g1_A003 Floral-Induced Me... 86 3e-014
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 86 3e-014
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 86 3e-014
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 86 3e-014
gb|CW203375.1|CW203375 104_631_11185990_116_37062_095 Sorgh... 84 1e-013
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 82 4e-013
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 82 4e-013
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 82 4e-013
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 80 2e-012
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 80 2e-012
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 80 2e-012
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 80 2e-012
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 80 2e-012
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 80 2e-012
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 80 2e-012
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 80 2e-012
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 78 7e-012
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 78 7e-012
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 78 7e-012
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 78 7e-012
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 78 7e-012
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 76 3e-011
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 76 3e-011
gb|CX617979.1|CX617979 GABR1_37_B05.b1_A002 GA- or brassino... 76 3e-011
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 74 1e-010
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 74 1e-010
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 74 1e-010
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 74 1e-010
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 74 1e-010
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 72 4e-010
gb|CW406407.1|CW406407 fsbb001f099g12f0 Sorghum methylation... 70 2e-009
gb|BF656312.1|BF656312 FM1_44_H04.g1_A003 Floral-Induced Me... 70 2e-009
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 70 2e-009
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 70 2e-009
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 68 7e-009
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 68 7e-009
gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Me... 68 7e-009
gb|BG465904.1|BG465904 RHIZ2_46_A10.g1_A003 Rhizome2 (RHIZ2... 68 7e-009
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 68 7e-009
gb|CW462663.1|CW462663 fsbb001f210o15k0 Sorghum methylation... 66 3e-008
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 66 3e-008
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 66 3e-008
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 66 3e-008
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 66 3e-008
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 66 3e-008
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 66 3e-008
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 64 1e-007
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 62 4e-007
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 62 4e-007
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 62 4e-007
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 60 2e-006
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 60 2e-006
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 60 2e-006
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 60 2e-006
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 60 2e-006
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 60 2e-006
gb|BG103120.1|BG103120 RHIZ2_18_D07.g1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 60 2e-006
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 60 2e-006
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 60 2e-006
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 60 2e-006
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 60 2e-006
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 60 2e-006
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 58 6e-006
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 58 6e-006
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 58 6e-006
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 58 6e-006
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 56 3e-005
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 56 3e-005
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 56 3e-005
gb|CW434433.1|CW434433 fsbb001f150c03f0 Sorghum methylation... 56 3e-005
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 56 3e-005
gb|BE362694.1|BE362694 DG1_88_F12.g1_A002 Dark Grown 1 (DG1... 56 3e-005
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 54 1e-004
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 54 1e-004
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 54 1e-004
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 54 1e-004
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 54 1e-004
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 54 1e-004
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 54 1e-004
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 54 1e-004
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 54 1e-004
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 54 1e-004
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 54 1e-004
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 54 1e-004
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 54 1e-004
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 54 1e-004
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 52 4e-004
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 52 4e-004
gb|BE919029.1|BE919029 FM1_3_B10.g1_A003 Floral-Induced Mer... 52 4e-004
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 52 4e-004
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 52 4e-004
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 52 4e-004
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 52 4e-004
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 52 4e-004
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 52 4e-004
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 52 4e-004
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 52 4e-004
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 52 4e-004
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 52 4e-004
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 52 4e-004
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 50 0.002
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 50 0.002
gb|CW195166.1|CW195166 104_618_11180494_116_36796_085 Sorgh... 48 0.006
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 48 0.006
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 48 0.006
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 48 0.006
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 48 0.006
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 48 0.006
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 48 0.006
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 48 0.006
gb|CN132797.1|CN132797 OX1_8_F12.b1_A002 Oxidatively-stress... 48 0.006
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 48 0.006
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 46 0.024
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 46 0.024
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 46 0.024
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 46 0.024
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 44 0.097
gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Me... 44 0.097
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 44 0.097
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 44 0.097
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 44 0.097
gb|BF705097.1|BF705097 RHIZ2_1_D04.b1_A003 Rhizome2 (RHIZ2)... 44 0.097
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 44 0.097
gb|CL180764.1|CL180764 104_391_10896249_116_31928_009 Sorgh... 42 0.38
gb|CW038724.1|CW038724 104_271_10505091_114_30387 Sorghum m... 42 0.38
gb|CW038725.1|CW038725 104_271_10505091_115_30388 Sorghum m... 42 0.38
gb|CW128461.1|CW128461 104_510_11114014_116_34759_095 Sorgh... 42 0.38
gb|CW128462.1|CW128462 104_510_11114014_148_34755_095 Sorgh... 42 0.38
gb|CW188756.1|CW188756 104_608_11173214_148_36731_051 Sorgh... 42 0.38
gb|CW235146.1|CW235146 104_690_11214827_116_37407_042 Sorgh... 42 0.38
gb|CW258772.1|CW258772 104_724_11228059_116_35164_068 Sorgh... 42 0.38
gb|AW744988.1|AW744988 LG1_385_E11.b1_A002 Light Grown 1 (L... 42 0.38
gb|BE357245.1|BE357245 DG1_148_G06.b1_A002 Dark Grown 1 (DG... 42 0.38
gb|BE357316.1|BE357316 DG1_148_G06.g1_A002 Dark Grown 1 (DG... 42 0.38
gb|BF318071.1|BF318071 OV1_11_F10.b1_A002 Ovary 1 (OV1) Sor... 42 0.38
gb|BG048845.1|BG048845 OV1_23_G05.b1_A002 Ovary 1 (OV1) Sor... 42 0.38
gb|BG241214.1|BG241214 OV1_39_E11.b1_A002 Ovary 1 (OV1) Sor... 42 0.38
gb|BM323839.1|BM323839 PIC1_28_B12.b1_A002 Pathogen-infecte... 42 0.38
gb|CD227737.1|CD227737 CCC1_53_E09.g1_A007 Callus culture/c... 42 0.38
gb|CD228301.1|CD228301 CCC1_6_C08.g1_A007 Callus culture/ce... 42 0.38
gb|CD229630.1|CD229630 CCC1_17_G06.g1_A007 Callus culture/c... 42 0.38
gb|CF484746.1|CF484746 POL1_27_F02.b1_A002 Pollen Sorghum b... 42 0.38
>gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_27_H08_A002 3', mRNA sequence
Length = 783
Score = 1310 bits (661), Expect = 0.0
Identities = 751/781 (96%)
Strand = Plus / Minus
Query: 1853 aaagtttctttatcttctcaaatttaggtttagaggtcttggtcttcttcttggtcttcc 1912
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 783 aaagtttctttatcttctcaaatttaggtttagaggtcttagtcttcttcttggtcttcc 724
Query: 1913 tgttaccaaaacagcaacagcaaatgcaccactttggccagcagttgcaagttcttgatg 1972
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 723 tgttaccaaaacagcaacagcaaatgcaccactttggccagcagttgcaagtccttgatg 664
Query: 1973 gtggcttctttgttttgggagcatcgtagccatataatgcctgccttctgaagacacatc 2032
||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||
Sbjct: 663 gtggcttctttgttttgggtgcgtcatagccatataatgcctgcctcctgaagacacatc 604
Query: 2033 cagtacccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaaa 2092
| ||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctgtaccaacgtaaatggggccttggataccatccaaacctttcatgttgatatcgaaaa 544
Query: 2093 agacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttgaggaa 2152
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 543 agacaacatttctgttagcatatcgatcatgacgatcaatcccatcgaatctttgaggaa 484
Query: 2153 actgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcct 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 actgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgcttcct 424
Query: 2213 ttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagcat 2272
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 423 ttatagccttactattattgatgtagtgatcacaatccaagttcagcaaataaggtgcat 364
Query: 2273 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatggt 2332
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 363 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttatgatggt 304
Query: 2333 tgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcca 2392
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 303 catagcctggccgtttttctcttgaaacgtaaaccaatcgaggcagctcatttccttcca 244
Query: 2393 catcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggacat 2452
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 243 cgtcatggccaccactttgaccaagaaaaacctgaatcattccaggatgatcacgaacat 184
Query: 2453 tatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttggg 2512
| ||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 183 tgtttccaggccatggtgtcccatcctgcattgtccatccttcctcaggtaccttttggg 124
Query: 2513 ctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 123 ctttagcaaccaaggcattgattctaaccttgaattcctcgtactctctcttcattgctc 64
Query: 2573 tccgttctctaacaaagtttggcgccaccttgtctttcaggtagtctatcttctgttgga 2632
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tccgttctctaacgaagtttggcgccaccttgtctttcaggtagtctatcttctgttgga 4
Query: 2633 a 2633
|
Sbjct: 3 a 3
>gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_18_C04_A002 5', mRNA sequence
Length = 627
Score = 1025 bits (517), Expect = 0.0
Identities = 600/627 (95%), Gaps = 3/627 (0%)
Strand = Plus / Minus
Query: 2651 gaggctcaaggctatatcttttgcagaaaggaacccatttctttgcaaattcagatgttt 2710
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 627 gaggctcaaggctataccttttgcagaaaggaacccatttctttgcaaattcagatgtct 568
Query: 2711 cagacaatgcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaacct 2770
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 567 cagacaatgcttcaaatgtcagcatggcagcaccatcatcagaaacatagcatgaaacct 508
Query: 2771 tatcaactggataatccaccgaaaggatagatagaacagtattagcagtgaccaatggag 2830
||||||||||||||||||||||| ||||||||||||||||||| || ||| | |||||||
Sbjct: 507 tatcaactggataatccaccgaatggatagatagaacagtatttgctgtgcctaatggag 448
Query: 2831 gttccttcaagggatcaaccgtactgacaaagaaatcaacaggggcgagttgagaaggat 2890
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
Sbjct: 447 gttccttcaagggatcaaccgtactgacaaagaaatccataggggcgagttgagaaggct 388
Query: 2891 gcccttccttgtcaaaccttaaactcagccggtcaagataggtttccctctcgataggaa 2950
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcccttccttgtcaaacctcaaagtcagccggtcaagataggtttccctctcgataggaa 328
Query: 2951 accactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacagatcacag 3010
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 accactttggaaactgatcaagaatccaagacatggcaaaccaaatttcacagatcacag 268
Query: 3011 atatgagccataaagcaaatgcatcaggcaccggatgcatcactcggtagtggaagaaga 3070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atatgagccataaagcaaatgcatcaggcaccggatgcatcactcggtagtggaagaaga 208
Query: 3071 aacacaaaaccactagccgaattattataatcatcctataggggttgatttggcttgaag 3130
| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 207 accccaaaaccactagccgaattatgataatcatcctataggggttgatttggcttgaag 148
Query: 3131 gaagcgggatctttctggacaatggctgtctagcttcatccattagtggtagatctgcat 3190
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gaagcggaatctttctggacaatggctgtctagcttcatccattagtggtagatctgcat 88
Query: 3191 catcaccatcatcg---ccgccgccatcgttcctcgtctggtgcatcctctcctgcttct 3247
|||| ||||||||| || || || |||||||||| |||||||||||||||||||||||
Sbjct: 87 catcgccatcatcgttaccaccaccgtcgttcctcgcctggtgcatcctctcctgcttct 28
Query: 3248 gcttccagctctccatcctctccttcc 3274
|||||||||||||||||||||||||||
Sbjct: 27 gcttccagctctccatcctctccttcc 1
>gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 721
Score = 989 bits (499), Expect = 0.0
Identities = 629/669 (94%), Gaps = 5/669 (0%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||| ||
Sbjct: 667 aaatatgggcaca---catctgcaaaattacttcttcgagaacacactgatggggaactc 611
Query: 643 cacgtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcatcc 702
||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 610 cacatgctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatcc 551
Query: 703 ttcgcaaggaaagggtcgatccggacccaaagcagcgagaagatcgaagccaggaggatg 762
|||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 550 ttcgcaaggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatg 491
Query: 763 gaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaac 822
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 490 gaccagacaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaat 431
Query: 823 gggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaacagggggccccat 882
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 430 gggtaaagatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggcccccat 371
Query: 883 gattcatatccgttgttgatcgcattggaaatgccagctaccactccaatgaagttcagt 942
||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 370 gattcatatccattgttgattgcattggaaacgccagctactactccaatgaaattcagt 311
Query: 943 aggagcagggttgtcggaggtatcagaagggtcgtccatttgaatgtgtacagctctgag 1002
|| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 310 agaagcagggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctgag 251
Query: 1003 aactcctcgtcgtctccgcccttggatgtcacagtgaagctcgtgtctacaccagctatg 1062
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aactcctcgtcgtctccacccttggatgtcacagtgaagctcgtgtctacaccagctatg 191
Query: 1063 accttgagtagtccctggaacacagcaaagagatgtgaagacacgcctccaatgacccaa 1122
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 190 accttgaggagtccttggaacacagcaaagagatgtgaagacacacctccaatgacccaa 131
Query: 1123 aactgctcgtttctccaccagtcatcgatgcctacaccactccatctcatttccaggatg 1182
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aactgctcatttctccaccaatcatcgatgcctacaccactccatctcatttccaggatg 71
Query: 1183 ctcgtagcaaaaatgcagatgaaaagtgacatg-aaccacaggctggcaacattgttaag 1241
|||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||
Sbjct: 70 ctcgtagcaaaaatgcagataaaaagtgacatgaaaccaga-gctggcaacattgttaag 12
Query: 1242 ctctggcgt 1250
|||||||||
Sbjct: 11 ctctggcgt 3
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 706 tctccccgtgtttctatctacagagg 681
>gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 540
Score = 912 bits (460), Expect = 0.0
Identities = 520/540 (96%)
Strand = Plus / Minus
Query: 2213 ttatagccttactattattgatatagtgatcacaatccaagttcagcaaataaggagcat 2272
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 540 ttatagccttactattattgatgtagtgatcacaatccaagttcagcaaataaggtgcat 481
Query: 2273 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttgtgatggt 2332
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 480 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttatgatggt 421
Query: 2333 tgtagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttcca 2392
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 420 catagcctggccgtttttctcttgaaacgtaaaccaatcgaggcagctcatttccttcca 361
Query: 2393 catcatggccaccactttgaccaaggaaaacctgaatcattccaggatgatcacggacat 2452
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 360 cgtcatggccaccactttgaccaagaaaaacctgaatcattccaggatgatcacgaacat 301
Query: 2453 tatttccgggccatggagttccatcctgcattgtccatccttcctcaggaaccttttggg 2512
| ||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 300 tgtttccaggccatggtgtcccatcctgcattgtccatccttcctcaggtaccttttggg 241
Query: 2513 ctttagcaaccaaggcattgattctgaccttgaattcctcatactctctcttcattgctc 2572
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 240 ctttagcaaccaaggcattgattctaaccttgaattcctcgtactctctcttcattgctc 181
Query: 2573 tccgttctctaacaaagtttggcgccaccttgtctttcaggtagtctatcttctgttgga 2632
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 tccgttctctaacgaagtttggcgccaccttgtctttcaggtagtctatcttttgttgga 121
Query: 2633 agtaccactctggagcacgaggctcaaggctatatcttttgcagaaaggaacccatttct 2692
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 120 aataccactctggagcacgaggctcaaggctataccttttgcagaaaggaacccatttct 61
Query: 2693 ttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcag 2752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcag 1
>gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_8_F02_A002 5', mRNA sequence
Length = 555
Score = 797 bits (402), Expect = 0.0
Identities = 451/466 (96%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 3289 tagccatatgcggcgagatccttggaagggtccatagacctcggttgcacaggaaggttg 3348
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 555 tagccatatgcggcgagatccttggaagggtccatagaccttggttgcacaggaaggttg 496
Query: 3349 ggatccgcgtacgggagagggtgaatcctcttccc-cccgccacccacgaacgagggcac 3407
|||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 495 ggatccgcgtacggaagagggtgaatcctcttcccacccaccacccatgaacgagggcac 436
Query: 3408 aagggcgtgctggtccggcgggatgtcatcgaccatctgtccgttggtgaggaggggaac 3467
||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 435 aagtgcgtgctgctccggcggaatgtcatcgaccatctgtccgttggtgaggagaggaac 376
Query: 3468 attggggatgggctggaatggctgcggcacgccgtcgaggtcggcgccgcggccgtagct 3527
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attagggatgggctggaatggttgcggcacgccgtcgaggtcggcgccgcggccgtagct 316
Query: 3528 catgtgggcgtggagcatggactcggcgaggtactgggagtcgtgcttgtcgccccagtt 3587
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 315 catgtgggcgtggagcatggactcggcgacgtactgggagtcgtgcttgtcgctccagtt 256
Query: 3588 gaactcgttctccaggtcgtcgacgccgtcctcctcctcgtccccgggcacgcgcgcgca 3647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaactcgttctccaggtcgtcgacgccgtcctcctcctcgtccccgggcacgcgcgcgca 196
Query: 3648 ccccttgaagcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcggcg 3707
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 195 ccccttgaggcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcgtcg 136
Query: 3708 ctcgtactcgtagcagtcccggcagatggggaaggcgcactcgttg 3753
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctcgtactcgtagcagtcccggcagatggggaaggcgcactcgttg 90
>gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_B05_A002 5', mRNA sequence
Length = 728
Score = 688 bits (347), Expect = 0.0
Identities = 623/715 (87%)
Strand = Plus / Minus
Query: 772 atgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaaga 831
|||||||| ||||| |||||||| ||||| ||||||| ||| |||||||| || || |||
Sbjct: 728 atgacaattgttggtgtcctgttttgccttccaaccaaacctttgaggaagggatacaga 669
Query: 832 tggacgatcacccaaaatgcaaagaagagcttcccgaacagggggccccatgattcatat 891
||||| ||||||||||||||||||||||||||||| || ||||| |||||||| ||||||
Sbjct: 668 tggacaatcacccaaaatgcaaagaagagcttcccaaagaggggaccccatgactcatat 609
Query: 892 ccgttgttgatcgcattggaaatgccagctaccactccaatgaagttcagtaggagcagg 951
||||| ||||| || ||||||| ||||| ||||| ||||||||||||| ||||||||
Sbjct: 608 ccgttattgattgcgttggaaacaccagcaaccacaccaatgaagttcaataggagcaaa 549
Query: 952 gttgtcggaggtatcagaagggtcgtccatttgaatgtgtacagctctgagaactcctcg 1011
|| || |||||||||| | ||| |||||||||||||| ||||||||||||||||||||
Sbjct: 548 gtggtaggaggtatcaataaggtagtccatttgaatgtatacagctctgagaactcctca 489
Query: 1012 tcgtctccgcccttggatgtcacagtgaagctcgtgtctacaccagctatgaccttgagt 1071
|| ||||| ||||| ||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 488 tcatctccaccctttgatgtcacagtgaagcttgtatcaacaccagctatgaccttgaga 429
Query: 1072 agtccctggaacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcg 1131
||||||||||||||||||||||| || || ||||| |||||||||||||| ||||||||
Sbjct: 428 agtccctggaacacagcaaagaggtgcgaggacacacctccaatgacccagaactgctca 369
Query: 1132 tttctccaccagtcatcgatgcctacaccactccatctcatttccaggatgctcgtagca 1191
|| |||||||| ||||| || || |||||||||||||||||||| |||||||| ||||||
Sbjct: 368 ttcctccaccaatcatcaattccaacaccactccatctcatttctaggatgcttgtagca 309
Query: 1192 aaaatgcagatgaaaagtgacatgaaccacaggctggcaacattgttaagctctggcgtg 1251
|||||||| || || ||||||||||||||||||||||||||||| || | |||||| |||
Sbjct: 308 aaaatgcaaataaagagtgacatgaaccacaggctggcaacattattcaactctggagtg 249
Query: 1252 ataaatttccctgtcagcaagcagatggcaggcaatgtgcaataggccaagagcgggata 1311
||||||||||| |||| || || |||||||||||||| || || ||||| || || |||
Sbjct: 248 ataaatttccccgtcaataaacaaatggcaggcaatgtacagtaagccaaaaggggaata 189
Query: 1312 gatgtccaagggtatacgatggagttaatgtacgaaaacctttccaggaactttagtcca 1371
||||||||||| || || |||||||| ||||| ||||| |||||||| || || || |||
Sbjct: 188 gatgtccaaggatacacaatggagttgatgtaggaaaatctttccagaaatttcaggcca 129
Query: 1372 ccaccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaaccaaga 1431
|| |||||||||||||| |||||||| || ||||||||||| |||||||| || ||||||
Sbjct: 128 ccgccatacccataccaaagagggcaatgattgctgaagaagatttcaatagacccaaga 69
Query: 1432 gcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctt 1486
||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 68 gcccaacgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctt 14
>gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 644 bits (325), Expect = 0.0
Identities = 417/447 (93%), Gaps = 3/447 (0%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||| ||
Sbjct: 452 aaatatgggcaca---catctgcaaaattacttcttcgacaacacactgatggggaactc 396
Query: 643 cacgtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcatcc 702
||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 395 cacatgctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatcc 336
Query: 703 ttcgcaaggaaagggtcgatccggacccaaagcagcgagaagatcgaagccaggaggatg 762
|||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 335 ttcgcaaggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatg 276
Query: 763 gaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaac 822
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 275 gaccagacaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaat 216
Query: 823 gggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaacagggggccccat 882
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 215 gggtaaagatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggcccccat 156
Query: 883 gattcatatccgttgttgatcgcattggaaatgccagctaccactccaatgaagttcagt 942
||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 155 gattcatatccattgttgattgcattggaaacgccagctactactccaatgaaattcagt 96
Query: 943 aggagcagggttgtcggaggtatcagaagggtcgtccatttgaatgtgtacagctctgag 1002
|| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 95 agaagcagggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctgag 36
Query: 1003 aactcctcgtcgtctccgcccttggat 1029
||||||||||||||||| |||||||||
Sbjct: 35 aactcctcgtcgtctccacccttggat 9
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 491 tctccccgtgtttctatctacagagg 466
>gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H04_A002 5', mRNA sequence
Length = 723
Score = 624 bits (315), Expect = e-176
Identities = 429/467 (91%)
Strand = Plus / Minus
Query: 1894 gtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggccag 1953
|||||||||||| |||||| |||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 467 gtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccacttcggccag 408
Query: 1954 cagttgcaagttcttgatggtggcttctttgttttgggagcatcgtagccatataatgcc 2013
||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 407 cagttgcaagtccttgatggtggcttctttgttttgggggcatcataaccatataatgcc 348
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
|||||||| || |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 347 tgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatccaaacct 288
Query: 2074 ttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatc 2133
||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 287 ttcatattgatatcgaaaaagacaacattcctgttagcatatcggtcatggcgatcagtc 228
Query: 2134 ccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatc 2193
||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||||
Sbjct: 227 ccatcaaatctttgagggaactgtacatagcaaaccttctttcctagtaaagggtccatc 168
Query: 2194 ataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatccaag 2253
||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||
Sbjct: 167 ataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatcacaatccaag 108
Query: 2254 ttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcatagca 2313
|| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tttagcaaatatggagcatttgttagtacagcagagactcggaccaatgcattcatagca 48
Query: 2314 ccagccttcttgtgatggttgtagcctggccgtttttctcttgaaac 2360
||||| ||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 47 ccagctttcttatgatggtcatagcctggccgtttctctcttgaaac 1
Score = 264 bits (133), Expect = 6e-068
Identities = 199/221 (90%)
Strand = Plus / Minus
Query: 1635 gacatgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccatt 1694
||||||||||||||| |||| ||||||||| ||||| |||||||||| ||||||||||||
Sbjct: 723 gacatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccatt 664
Query: 1695 ctcaagaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttctg 1754
||| || |||||||||| |||||| || |||||||| |||||||||||||| || || ||
Sbjct: 663 ctcgagcagtgtggatgtaacaaagacagaagactgaccaaatttcttttctaatttttg 604
Query: 1755 ttgatttacaatactagccttttcattttcagctcctggagcggcttcatcaatttcacc 1814
|||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 603 ttgatttacaataccagctttttcattctcagctcctggagcagcttcatcaatttcacc 544
Query: 1815 aagagcatatgcaggggcttgattttcctttttcttaaaaa 1855
||||||||||||||||| ||||||||| | |||||| ||||
Sbjct: 543 aagagcatatgcaggggattgattttcttctttcttgaaaa 503
>gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 412
Score = 615 bits (310), Expect = e-173
Identities = 379/402 (94%)
Strand = Plus / Minus
Query: 641 tccacgtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcat 700
||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 409 tccacatgctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcat 350
Query: 701 ccttcgcaaggaaagggtcgatccggacccaaagcagcgagaagatcgaagccaggagga 760
|||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 349 ccttcgcaaggaaaggatctatccggacccagagcagcgagaagattgaagccaagagga 290
Query: 761 tggaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgagga 820
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 289 tggaccagacaatgacaattgttggcgttctgttctgcctcccaaccagacccttgagga 230
Query: 821 acgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaacagggggcccc 880
| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 229 atgggtaaagatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggccccc 170
Query: 881 atgattcatatccgttgttgatcgcattggaaatgccagctaccactccaatgaagttca 940
||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||
Sbjct: 169 atgattcatatccattgttgattgcattggaaacgccagctactactccaatgaaattca 110
Query: 941 gtaggagcagggttgtcggaggtatcagaagggtcgtccatttgaatgtgtacagctctg 1000
|||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 109 gtagaagcagggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctg 50
Query: 1001 agaactcctcgtcgtctccgcccttggatgtcacagtgaagc 1042
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 49 agaactcctcgtcgtctccacccttggatgtcacagtgaagc 8
>gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 363
Score = 605 bits (305), Expect = e-170
Identities = 341/353 (96%)
Strand = Plus / Minus
Query: 1456 cgatcggaaagattgagaggtgcggaacctttgaaggcggcccgtttaggtatgcagtaa 1515
||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 361 cgatcggaaagattgagaggtgcagaaccttgcaaagcggcccgtttaggtatgcagtaa 302
Query: 1516 attgaccgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgat 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 301 attgaccgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtaactgat 242
Query: 1576 ccataaatccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatg 1635
||||||||||||||||||||||||||||| |||| ||||||||||| || |||||||||
Sbjct: 241 ccataaatccaaccaatatcttttccccaatctgtcttgtcttcatagccgcaactgatg 182
Query: 1636 acatgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccattc 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccattc 122
Query: 1696 tcaagaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttctgt 1755
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 tcaagaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttttgt 62
Query: 1756 tgatttacaatactagccttttcattttcagctcctggagcggcttcatcaat 1808
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 tgatttacaatactagccttttcattttcagctcctggagcagcttcatcaat 9
>gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 362
Score = 559 bits (282), Expect = e-157
Identities = 336/354 (94%)
Strand = Plus / Minus
Query: 809 gacccttgaggaacgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccga 868
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 362 gacctttgaggaatgggtaaagatggacaatcacccaaaatgcaaagaagagcttcccga 303
Query: 869 acagggggccccatgattcatatccgttgttgatcgcattggaaatgccagctaccactc 928
||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||| ||||
Sbjct: 302 acaggggcccccatgattcatatccattgttgattgcattggaaacgccagctactactc 243
Query: 929 caatgaagttcagtaggagcagggttgtcggaggtatcagaagggtcgtccatttgaatg 988
||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 242 caatgaaattcagtagaagcagggtggtcggaggtatcagaagggttgtccatttgaatg 183
Query: 989 tgtacagctctgagaactcctcgtcgtctccgcccttggatgtcacagtgaagctcgtgt 1048
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 182 tgtacagctctgagaactcctcgtcgtctccacccttggatgtcacagtgaagctcgtgt 123
Query: 1049 ctacaccagctatgaccttgagtagtccctggaacacagcaaagagatgtgaagacacgc 1108
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 122 ctacaccagctatgaccttgaggagtccttggaacacagcaaagagatgtgaagacacac 63
Query: 1109 ctccaatgacccaaaactgctcgtttctccaccagtcatcgatgcctacaccac 1162
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 62 ctccaatgacccaaaactgctcatttctccaccaatcatcgatgcctacaccac 9
>gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_F01_A002 5', mRNA sequence
Length = 591
Score = 537 bits (271), Expect = e-150
Identities = 496/571 (86%)
Strand = Plus / Minus
Query: 2740 gcaccatcatcagaaacgtagcacgaaaccttatcaactggataatccaccgaaaggata 2799
||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 585 gcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgcaaggata 526
Query: 2800 gatagaacagtattagcagtgaccaatggaggttccttcaagggatcaaccgtactgaca 2859
|| ||||||||||| || |||||||| ||||||||||| || |||||||| |||||||||
Sbjct: 525 gacagaacagtatttgctgtgaccaaaggaggttcctttaacggatcaactgtactgaca 466
Query: 2860 aagaaatcaacaggggcgagttgagaaggatgcccttccttgtcaaaccttaaactcagc 2919
|| ||||||| || || |||||||| || || ||||||||||||||||| | ||||
Sbjct: 465 aaaaaatcaattggagcaagttgagatggctggccttccttgtcaaacctcagtgacagc 406
Query: 2920 cggtcaagataggtttccctctcgataggaaaccactttggaaactggtcaagaatccaa 2979
|| || || || || || ||||| ||||| |||||||||| || || ||||||||||||
Sbjct: 405 cgatctaggtaagtctctctctcaataggggaccactttgggaattgatcaagaatccaa 346
Query: 2980 gacatggcaaaccaaatttcacagatcacagatatgagccataaagcaaatgcatcaggc 3039
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||| |
Sbjct: 345 gacatggcaaaccagatttcacagataaccgatatgagccacaaagcaaatgcatcattc 286
Query: 3040 accggatgcatcactcggtagtggaagaagaaacacaaaaccactagccgaattattata 3099
|||||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||
Sbjct: 285 accggatgcatcactcggtagtggaagaagaaccccaaaaccacaagccgaataatgata 226
Query: 3100 atcatcctataggggttgatttggcttgaaggaagcgggatctttctggacaatggctgt 3159
||||||||||| || ||||| |||||||| |||| ||| || || ||||||| || |||
Sbjct: 225 atcatcctatatggattgatctggcttgatggaatcggaattttcctggacagcggttgt 166
Query: 3160 ctagcttcatccattagtggtagatctgcatcatcaccatcatcgccgccgccatcgttc 3219
|| ||||||||||||||||||||||| ||||||||||| ||||| || || |||||||||
Sbjct: 165 cttgcttcatccattagtggtagatcagcatcatcaccgtcatcaccaccaccatcgttc 106
Query: 3220 ctcgtctggtgcatcctctcctgcttctgcttccagctctccatcctctccttccatgct 3279
|||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||
Sbjct: 105 ctcgtctggtgcatcctctcctgcctctgcttccaactctccatccgctccttccaagca 46
Query: 3280 acgctcccgtagccatatgcggcgagatcct 3310
|| || || || |||||||| || |||||||
Sbjct: 45 acactaccatacccatatgcagcaagatcct 15
>gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 580
Score = 509 bits (257), Expect = e-142
Identities = 473/545 (86%)
Strand = Plus / Minus
Query: 2471 ttccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaaggcat 2530
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 553 ttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcgt 494
Query: 2531 tgattctgaccttgaattcctcatactctctcttcattgctctccgttctctaacaaagt 2590
|||| || |||||||||||||| || |||||||||||||| |||| || ||||||||
Sbjct: 493 tgatccttaccttgaattcctcgtattctctcttcattgccctcctctccctaacaaatg 434
Query: 2591 ttggcgccaccttgtctttcaggtagtctatcttctgttggaagtaccactctggagcac 2650
| || |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 433 aagcggcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcac 374
Query: 2651 gaggctcaaggctatatcttttgcagaaaggaacccatttctttgcaaattcagatgttt 2710
|||||||||| || | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 gaggctcaagattaaactttttgcagaaaggaacccatttttttgcaaattcagatgttt 314
Query: 2711 cagacaatgcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaacct 2770
||||||| |||||||| || ||||| |||||||||||||||||||| ||||| || ||||
Sbjct: 313 cagacaacgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagacct 254
Query: 2771 tatcaactggataatccaccgaaaggatagatagaacagtattagcagtgaccaatggag 2830
| ||||| ||||||||||| |||||||| || || ||||| || || |||||||| ||||
Sbjct: 253 tctcaaccggataatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggag 194
Query: 2831 gttccttcaagggatcaaccgtactgacaaagaaatcaacaggggcgagttgagaaggat 2890
||||||| ||||||||||||||||||||||||| |||| || || || ||||| || |
Sbjct: 193 gttcctttgagggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggtt 134
Query: 2891 gcccttccttgtcaaaccttaaactcagccggtcaagataggtttccctctcgataggaa 2950
| ||||||||||||||||||| || ||||| || || || || ||||| || ||||
Sbjct: 133 gaccttccttgtcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaa 74
Query: 2951 accactttggaaactggtcaagaatccaagacatggcaaaccaaatttcacagatcacag 3010
||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 73 gccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacag 14
Query: 3011 atatg 3015
|||||
Sbjct: 13 atatg 9
>gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 502 bits (253), Expect = e-139
Identities = 499/581 (85%)
Strand = Plus / Minus
Query: 1195 atgcagatgaaaagtgacatgaaccacaggctggcaacattgttaagctctggcgtgata 1254
|||||||||||||||| ||||||||| | || || |||||| |||||||||| ||||||
Sbjct: 590 atgcagatgaaaagtgccatgaaccagatactagcgacattggtaagctctggtgtgata 531
Query: 1255 aatttccctgtcagcaagcagatggcaggcaatgtgcaataggccaagagcgggatagat 1314
|||||||| || |||| |||||||||||||| || || || |||||||| || || |||
Sbjct: 530 aatttccccgtgagcagacagatggcaggcaaggtacagtaagccaagagaggaatggat 471
Query: 1315 gtccaagggtatacgatggagttaatgtacgaaaacctttccaggaactttagtccacca 1374
||||| |||||||| || ||||| ||||| ||||||||||||| || ||||| ||||||
Sbjct: 470 gtccatgggtatacaatagagttgatgtaagaaaacctttccaaaaattttaggccacca 411
Query: 1375 ccatacccataccagagagggcagtggttgctgaagaaaatttcaattgaaccaagagcc 1434
||||| || ||||| || |||||||| ||||||||||||||||||| || |||||||||
Sbjct: 410 ccatatccgtaccaaagtgggcagtgcttgctgaagaaaatttcaacagatccaagagcc 351
Query: 1435 caccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttgaaggcg 1494
|| ||||| ||||||||||| || || |||||||| |||||||| ||||||||||| ||
Sbjct: 350 caacgaaggacctggtgaagccggtcagaaagattcagaggtgcagaacctttgaatgca 291
Query: 1495 gcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatcttaaacccagta 1554
| ||| || || ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 290 ggccgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatcttaaatccagtc 231
Query: 1555 agaatatcttctgtgactgatccataaatccaaccaatatcttttccccagcctgttttg 1614
| ||||| ||||| | ||||||||||||||| ||||| ||||| |||||| | || |||
Sbjct: 230 aagatatcctctgtaattgatccataaatccagccaatctctttcccccagtcagtcttg 171
Query: 1615 tcttcatatccacaactgatgacatgtatagcttccttcagaagagaagctggactggca 1674
||||| || || || ||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 170 tcttcgtagccgcagctgattacatgtatagcttcctttagaagagaagctggacttgca 111
Query: 1675 ctcttcagggttccaccattctcaagaagtgtggatgcaacaaaaactgaagactggcca 1734
||| ||||||| |||||||||||||||||||| |||||||||||||| || ||||| |||
Sbjct: 110 ctcctcagggtcccaccattctcaagaagtgttgatgcaacaaaaacagatgactgccca 51
Query: 1735 aatttcttttccaacttctgttgatttacaatactagcctt 1775
||||||||||| | ||||||||| ||||||| | ||||||
Sbjct: 50 aatttcttttctagtttctgttgacttacaattccagcctt 10
>gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 299
Score = 470 bits (237), Expect = e-130
Identities = 276/289 (95%)
Strand = Plus / Minus
Query: 1859 tctttatcttctcaaatttaggtttagaggtcttggtcttcttcttggtcttcctgttac 1918
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 297 tctttatcttctcaaatttaggtttagaggtcttagtcttcttcttggtcttcctgttac 238
Query: 1919 caaaacagcaacagcaaatgcaccactttggccagcagttgcaagttcttgatggtggct 1978
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 237 caaaacagcaacagcaaatgcaccactttggccagcagttgcaagtccttgatggtggct 178
Query: 1979 tctttgttttgggagcatcgtagccatataatgcctgccttctgaagacacatccagtac 2038
||||||||||||| || || |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 177 tctttgttttgggtgcgtcatagccatataatgcctgcctcctgaagacacatcctgtac 118
Query: 2039 ccacataaattgggccctggataccatccaaacctttcatgttgatatcgaaaaagacaa 2098
| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 caacgtaaatggggccttggataccatccaaacctttcatgttgatatcgaaaaagacaa 58
Query: 2099 catttctgttagcatatcgatcatggcgatcaatcccatcaaatctttg 2147
||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 57 catttctgttagcatatcgatcatgacgatcaatcccatcgaatctttg 9
>gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 468
Score = 468 bits (236), Expect = e-129
Identities = 398/452 (88%)
Strand = Plus / Minus
Query: 2347 ttttctcttgaaacataaaccaatcgaggcagctcatttccttccacatcatggccacca 2406
|||||||| || |||||||| | ||||||| ||||||||||||||||||| | ||||||
Sbjct: 462 ttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccacca 403
Query: 2407 ctttgaccaaggaaaacctgaatcattccaggatgatcacggacattatttccgggccat 2466
||||| |||||||| ||||||||||||||||||||||| || || || ||||| |||||
Sbjct: 402 ctttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccag 343
Query: 2467 ggagttccatcctgcattgtccatccttcctcaggaaccttttgggctttagcaaccaag 2526
| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 342 aggcttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaag 283
Query: 2527 gcattgattctgaccttgaattcctcatactctctcttcattgctctccgttctctaaca 2586
|| ||||| || |||||||||||||| || |||||||||||||| |||| || ||||||
Sbjct: 282 gcgttgatccttaccttgaattcctcgtattctctcttcattgccctcctctccctaaca 223
Query: 2587 aagtttggcgccaccttgtctttcaggtagtctatcttctgttggaagtaccactctgga 2646
|| | || |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 222 aatgaagcggcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcagga 163
Query: 2647 gcacgaggctcaaggctatatcttttgcagaaaggaacccatttctttgcaaattcagat 2706
|||||||||||||| || | |||||||||||||||||||||| |||||||||||||||
Sbjct: 162 gcacgaggctcaagattaaactttttgcagaaaggaacccatttttttgcaaattcagat 103
Query: 2707 gtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaa 2766
||||||||||| |||||||| || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 102 gtttcagacaacgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggag 43
Query: 2767 accttatcaactggataatccaccgaaaggat 2798
||||| ||||| ||||||||||| ||||||||
Sbjct: 42 accttctcaaccggataatccacggaaaggat 11
>gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_F12_A002 5', mRNA sequence
Length = 704
Score = 454 bits (229), Expect = e-125
Identities = 577/693 (83%)
Strand = Plus / Minus
Query: 792 gttctgcctcccaaccagacccttgaggaacgggtaaagatggacgatcacccaaaatgc 851
|||||||| || ||||||||||||||||||||||| ||||||| ||||||||| || ||
Sbjct: 700 gttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccagaacgc 641
Query: 852 aaagaagagcttcccgaacagggggccccatgattcatatccgttgttgatcgcattgga 911
||||||||||||||||| || || |||||||| || || |||||||||||||| || ||
Sbjct: 640 gaagaagagcttcccgaagagaggaccccatgactcgtacccgttgttgatcgcgttcga 581
Query: 912 aatgccagctaccactccaatgaagttcagtaggagcagggttgtcggaggtatcagaag 971
|| ||||| || || || ||||||||||| ||||| || || || ||||| |||| ||
Sbjct: 580 gattccagccacgaccccgatgaagttcagcaggagaagcgtggttggagggatcaacag 521
Query: 972 ggtcgtccatttgaatgtgtacagctctgagaactcctcgtcgtctccgcccttggatgt 1031
||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 520 ggtggtccatttgaacgtgtacagctctgagaactcctcgtcgtccccggcctttgatgt 461
Query: 1032 cacagtgaagctcgtgtctacaccagctatgaccttgagtagtccctggaacacagcaaa 1091
|| |||||||||||||| | ||| || | ||||||||| || || |||||||| | ||
Sbjct: 460 gacggtgaagctcgtgtcgataccggcgaggaccttgagaaggccttggaacaccgtgaa 401
Query: 1092 gagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtcatcgat 1151
|||||||| || || |||||||||||||| |||||||||||||| | | |||| |
Sbjct: 400 gagatgtgcggaaacacctccaatgacccagaactgctcgtttctgcggcggtcaaaaaa 341
Query: 1152 gcctacaccactccatctcatttccaggatgctcgtagcaaaaatgcagatgaaaagtga 1211
| |||||||||||||||||||| ||||||| || || |||||||||||||||||
Sbjct: 340 aaccacaccactccatctcatttcaaggatgccggtgacagcaatgcagatgaaaagtgc 281
Query: 1212 catgaaccacaggctggcaacattgttaagctctggcgtgataaatttccctgtcagcaa 1271
||||||||| | || || |||||| |||||||||| |||||||||||||| || ||||
Sbjct: 280 catgaaccagatactagcgacattggtaagctctggtgtgataaatttccccgtgagcag 221
Query: 1272 gcagatggcaggcaatgtgcaataggccaagagcgggatagatgtccaagggtatacgat 1331
|||||||||||||| || || || |||||||| || || |||||||| |||||||| ||
Sbjct: 220 acagatggcaggcaaggtacagtaagccaagagaggaatggatgtccatgggtatacaat 161
Query: 1332 ggagttaatgtacgaaaacctttccaggaactttagtccaccaccatacccataccagag 1391
||||| ||||| ||||||||||||| || ||||| || |||||||| || ||||| ||
Sbjct: 160 agagttgatgtaagaaaacctttccaaaaattttaggccgccaccatatccgtaccaaag 101
Query: 1392 agggcagtggttgctgaagaaaatttcaattgaaccaagagcccaccgaagaacctggtg 1451
|||||||| |||||||||||||||||| || ||||||||||| ||||| ||||||||
Sbjct: 100 tgggcagtgcatgctgaagaaaatttcaacagatccaagagcccaacgaaggacctggtg 41
Query: 1452 aagacgatcggaaagattgagaggtgcggaacc 1484
||| || || |||||||| |||||||| |||||
Sbjct: 40 aagccggtcagaaagattcagaggtgcagaacc 8
>gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_21_C05_A002 5', mRNA sequence
Length = 429
Score = 446 bits (225), Expect = e-123
Identities = 242/248 (97%)
Strand = Plus / Minus
Query: 3631 ccgggcacgcgcgcgcaccccttgaagcgcttgaagcgggtcttgcactgggggcagttc 3690
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 429 ccgggcacgcgcgcgcaccccttgaggcgcttgaagcgggtcttgcactgggggcagttc 370
Query: 3691 tgcgtgccctcgcggcgctcgtactcgtagcagtcccggcagatggggaaggcgcactcg 3750
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 369 tgcgtgccctcgcgtcgctcgtactcgtagcagtcccgncagatggggaaggcgcactcg 310
Query: 3751 ttgcaggccacgaaaggctccccgtcggggttgcgccccacgtcgtcgccgcaaatctgg 3810
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 309 ttgcaggccacgaagggctccccgtccgggttgcgccccacgtcgtcgccgcaaatctgg 250
Query: 3811 cacacctggccgttccgctggtccatgggcttcggccctggctcgccatcgcggcggatg 3870
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 249 cacacctggccgttccgctggtccatcggcttcggccctggctcgccatcgcggcggatg 190
Query: 3871 acgacgag 3878
||||||||
Sbjct: 189 acgacgag 182
>gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 440 bits (222), Expect = e-121
Identities = 462/542 (85%)
Strand = Plus / Minus
Query: 1078 tggaacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctc 1137
|||||||| || |||||||||| || || |||||||||||||| |||||||||||||||
Sbjct: 543 tggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttctc 484
Query: 1138 caccagtcatcgatgcctacaccactccatctcatttccaggatgctcgtagcaaaaatg 1197
||||||||||||||| | |||||||||||||||||||| ||||||| || || ||||
Sbjct: 483 caccagtcatcgatggccacaccactccatctcatttcaaggatgccggtgacagcaatg 424
Query: 1198 cagatgaaaagtgacatgaaccacaggctggcaacattgttaagctctggcgtgataaat 1257
||||||||||||| ||||||||| | || || |||||| |||||||||| |||||||||
Sbjct: 423 cagatgaaaagtgccatgaaccagatactagcgacattggtaagctctggtgtgataaat 364
Query: 1258 ttccctgtcagcaagcagatggcaggcaatgtgcaataggccaagagcgggatagatgtc 1317
||||| || |||| |||||||||||||| || || || |||||||| || || ||||||
Sbjct: 363 ttccccgtgagcagacagatggcaggcaaggtacagtaagccaagagaggaatggatgtc 304
Query: 1318 caagggtatacgatggagttaatgtacgaaaacctttccaggaactttagtccaccacca 1377
|| |||||||| || ||||| ||||| ||||||||||||| || ||||| || ||||||
Sbjct: 303 catgggtatacaatagagttgatgtaagaaaacctttccaaaaattttaggccgccacca 244
Query: 1378 tacccataccagagagggcagtggttgctgaagaaaatttcaattgaaccaagagcccac 1437
|| || ||||| || |||||||| ||||||||||||||||||| || |||||||||||
Sbjct: 243 tatccgtaccaaagtgggcagtgcttgctgaagaaaatttcaacagatccaagagcccaa 184
Query: 1438 cgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacctttgaaggcggcc 1497
||||| ||||||||||| || || |||||||| |||||||| ||||||||||| || | |
Sbjct: 183 cgaaggacctggtgaagccggtcagaaagattcagaggtgcagaacctttgaatgcaggc 124
Query: 1498 cgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatcttaaacccagtaaga 1557
|| || || ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 123 cgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatcttaaatccagtcaag 64
Query: 1558 atatcttctgtgactgatccataaatccaaccaatatcttttccccagcctgttttgtct 1617
||||| ||||| | ||||||||||||||| ||||| ||||| |||||| | || ||||||
Sbjct: 63 atatcctctgtaattgatccataaatccagccaatctctttcccccagtcagtcttgtct 4
Query: 1618 tc 1619
||
Sbjct: 3 tc 2
>gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 440 bits (222), Expect = e-121
Identities = 450/526 (85%)
Strand = Plus / Minus
Query: 658 tagttgcaatccagaccacactcctccaacaggggaccatcatccttcgcaaggaaaggg 717
|||||||| ||||||||||||||||||| || || ||||| ||| |||||||| |||
Sbjct: 551 tagttgcagtccagaccacactcctccagaagaggtccatcgctcttggcaaggaatggg 492
Query: 718 tcgatccggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgaca 777
||||| |||||||| || ||||||||||| || ||||| |||||||||||||| || ||
Sbjct: 491 tcgatgcggacccacaggagcgagaagatggaggccagcaggatggaccagacgatcacg 432
Query: 778 atcgttggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacg 837
||||| ||||||| |||||||| || ||||||||||||||||||||||| ||||||| |
Sbjct: 431 atcgtcggcgtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatg 372
Query: 838 atcacccaaaatgcaaagaagagcttcccgaacagggggccccatgattcatatccgttg 897
|||||||| || || ||||||||||||||||| || || |||||||| || || ||||||
Sbjct: 371 atcacccagaacgcgaagaagagcttcccgaagagaggaccccatgactcgtacccgttg 312
Query: 898 ttgatcgcattggaaatgccagctaccactccaatgaagttcagtaggagcagggttgtc 957
|||||||| || || || ||||| || || || |||||||| || ||||| || || ||
Sbjct: 311 ttgatcgcgttcgagattccagccacgaccccgatgaagttgagcaggagaagcgtggtg 252
Query: 958 ggaggtatcagaagggtcgtccatttgaatgtgtacagctctgagaactcctcgtcgtct 1017
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 251 ggaggtatcaacagggtggtccatttgaacgtgtacagctctgagaactcctcgtcgtcc 192
Query: 1018 ccgcccttggatgtcacagtgaagctcgtgtctacaccagctatgaccttgagtagtccc 1077
||| |||| ||||| || |||||||||||||| | ||| || | ||||||||| || ||
Sbjct: 191 ccggcctttgatgtgacggtgaagctcgtgtcgataccggcgaggaccttgagaaggcct 132
Query: 1078 tggaacacagcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctc 1137
|||||||| || |||||||||| || || |||||||||||||| |||||||||||||||
Sbjct: 131 tggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttctc 72
Query: 1138 caccagtcatcgatgcctacaccactccatctcatttccaggatgc 1183
||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 71 caccagtcatcgatggccacaccactccatctcatttcaaggatgc 26
>gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 424 bits (214), Expect = e-116
Identities = 415/482 (86%)
Strand = Plus / Minus
Query: 2542 ttgaattcctcatactctctcttcattgctctccgttctctaacaaagtttggcgccacc 2601
||||||||||| || |||||||||||||| |||| || |||||||| | || |||
Sbjct: 491 ttgaattcctcgtattctctcttcattgccctcctctccctaacaaatgaagcggcaacc 432
Query: 2602 ttgtctttcaggtagtctatcttctgttggaagtaccactctggagcacgaggctcaagg 2661
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 431 ttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctcaaga 372
Query: 2662 ctatatcttttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaatgct 2721
|| | |||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 371 ttaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgct 312
Query: 2722 tcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaactgga 2781
||||| || ||||| |||||||||||||||||||| ||||| || ||||| ||||| |||
Sbjct: 311 tcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccgga 252
Query: 2782 taatccaccgaaaggatagatagaacagtattagcagtgaccaatggaggttccttcaag 2841
|||||||| |||||||| || || ||||| || || |||||||| ||||||||||| ||
Sbjct: 251 taatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgag 192
Query: 2842 ggatcaaccgtactgacaaagaaatcaacaggggcgagttgagaaggatgcccttccttg 2901
||||||||||||||||||||||| |||| || || || ||||| || || |||||||||
Sbjct: 191 ggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgaccttccttg 132
Query: 2902 tcaaaccttaaactcagccggtcaagataggtttccctctcgataggaaaccactttgga 2961
|||||||||| || ||||| || || || || ||||| || |||| |||||||||
Sbjct: 131 tcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccactttggg 72
Query: 2962 aactggtcaagaatccaagacatggcaaaccaaatttcacagatcacagatatgagccat 3021
||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 71 aactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatgagccat 12
Query: 3022 aa 3023
||
Sbjct: 11 aa 10
>gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 477
Score = 418 bits (211), Expect = e-114
Identities = 394/455 (86%)
Strand = Plus / Minus
Query: 1990 ggagcatcgtagccatataatgcctgccttctgaagacacatccagtacccacataaatt 2049
|||||||| || ||||| | |||||||| |||||| |||||||||||||||||||| ||
Sbjct: 474 ggagcatcataaccatacagtgcctgccgtctgaaaacacatccagtacccacatagatg 415
Query: 2050 gggccctggataccatccaaacctttcatgttgatatcgaaaaagacaacatttctgtta 2109
|| || || ||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 414 ggtccttgaataccatccaaacctttcatgttgatatcaaaaaagacgacattcctgttt 355
Query: 2110 gcatatcgatcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaact 2169
|| ||||||||||| || ||||| |||||||| || ||||| ||||| |||||||| |||
Sbjct: 354 gcgtatcgatcatgacggtcaataccatcaaacctctgagggaactggacatagcacact 295
Query: 2170 ttctttccaagcaaaggatccatcataaaacacattgcttcctttatagccttactatta 2229
||||| || | ||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 294 ttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattg 235
Query: 2230 ttgatatagtgatcacaatccaagttcagcaaataaggagcattagttagtacagcagag 2289
||||| |||||||||||||||||||||| | || |||||||| | || |||||||||
Sbjct: 234 ttgatgtagtgatcacaatccaagttcaataggtacggagcatttgataagacagcagag 175
Query: 2290 actcggaccaatgcattcatagcaccagccttcttgtgatggttgtagcctggccgtttt 2349
|| ||||||| ||||||||| ||||||||||||||||||||||| || ||||||| |||
Sbjct: 174 acacggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttt 115
Query: 2350 tctcttgaaacataaaccaatcgaggcagctcatttccttccacatcatggccaccactt 2409
||||| || |||||||| | ||||||| ||||||||||||||||||| | |||||||||
Sbjct: 114 tctctcgagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactt 55
Query: 2410 tgaccaaggaaaacctgaatcattccaggatgatc 2444
|| |||||||| |||||||||||||||||||||||
Sbjct: 54 tggccaaggaatacctgaatcattccaggatgatc 20
>gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_15_D07_A011 3', mRNA sequence
Length = 393
Score = 416 bits (210), Expect = e-114
Identities = 285/310 (91%)
Strand = Plus / Minus
Query: 604 gcaaaaatacttcttcgaccacacactgacggggaagtccacgtgctgacctcctagttg 663
|||||| ||||||||| | ||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 310 gcaaaattacttcttcaaaaacacactgatggggaactccacatgctgacctcctagttg 251
Query: 664 caatccagaccacactcctccaacaggggaccatcatccttcgcaaggaaagggtcgatc 723
||||||| ||| || ||||||||||||||||||||||||||| |||||||||| || |||
Sbjct: 250 caatccaaaccgcattcctccaacaggggaccatcatccttcccaaggaaaggatctatc 191
Query: 724 cggacccaaagcagcgagaagatcgaagccaggaggatggaccagacaatgacaatcgtt 783
||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 190 cggacccaaagcagcgaaaagattgaagccaagaggatggaccagacaatgacaattgtt 131
Query: 784 ggcgtcctgttctgcctcccaaccagacccttgaggaacgggtaaagatggacgatcacc 843
||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||
Sbjct: 130 ggcgttctgttctgcctcccaaccaaacccttgaggaatgggtaaagatggacaatcacc 71
Query: 844 caaaatgcaaagaagagcttcccgaacagggggccccatgattcatatccgttgttgatc 903
||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 70 caaaatgcaaaaaaaagcttcccgaacagggggccccatgattcatatccattgttgatt 11
Query: 904 gcattggaaa 913
||||||||||
Sbjct: 10 gcattggaaa 1
>gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_20_E12_A002 5', mRNA sequence
Length = 436
Score = 404 bits (204), Expect = e-110
Identities = 372/428 (86%)
Strand = Plus / Minus
Query: 1086 agcaaagagatgtgaagacacgcctccaatgacccaaaactgctcgtttctccaccagtc 1145
||||||||| || || ||||| |||||||||||||| |||||||| || |||||||| ||
Sbjct: 436 agcaaagaggtgcgaggacacacctccaatgacccagaactgctcattcctccaccaatc 377
Query: 1146 atcgatgcctacaccactccatctcatttccaggatgctcgtagcaaaaatgcagatgaa 1205
||| || || |||||||||||||||||||| |||||||| |||||||||||||| || ||
Sbjct: 376 atcaattccaacaccactccatctcatttctaggatgcttgtagcaaaaatgcaaataaa 317
Query: 1206 aagtgacatgaaccacaggctggcaacattgttaagctctggcgtgataaatttccctgt 1265
||||||||||||||||||||||||||||| || | |||||| |||||||||||||| ||
Sbjct: 316 gagtgacatgaaccacaggctggcaacattattcaactctggagtgataaatttccccgt 257
Query: 1266 cagcaagcagatggcaggcaatgtgcaataggccaagagcgggatagatgtccaagggta 1325
|| || || |||||||||||||| || || ||||| || || |||||||||||||| ||
Sbjct: 256 caataaacaaatggcaggcaatgtacagtaagccaaaaggggaatagatgtccaaggata 197
Query: 1326 tacgatggagttaatgtacgaaaacctttccaggaactttagtccaccaccatacccata 1385
|| |||||||| ||||| ||||| |||||||| || || || ||||| |||||||||||
Sbjct: 196 cacaatggagttgatgtaggaaaatctttccagaaatttcaggccaccgccatacccata 137
Query: 1386 ccagagagggcagtggttgctgaagaaaatttcaattgaaccaagagcccaccgaagaac 1445
||| |||||||| || ||||||||||| |||||||| || ||||||||||| ||||| ||
Sbjct: 136 ccaaagagggcaatgattgctgaagaagatttcaatagacccaagagcccaacgaagcac 77
Query: 1446 ctggtgaagacgatcggaaagattgagaggtgcggaacctttgaaggcggcccgtttagg 1505
||||||||||||||| |||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 76 ctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacccgtttagg 17
Query: 1506 tatgcagt 1513
||||||||
Sbjct: 16 tatgcagt 9
>gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 398 bits (201), Expect = e-108
Identities = 363/417 (87%)
Strand = Plus / Minus
Query: 2599 accttgtctttcaggtagtctatcttctgttggaagtaccactctggagcacgaggctca 2658
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 425 accttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctca 366
Query: 2659 aggctatatcttttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaat 2718
|| || | |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 365 agattaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaac 306
Query: 2719 gcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaact 2778
|||||||| || ||||| |||||||||||||||||||| ||||| || ||||| |||||
Sbjct: 305 gcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaacc 246
Query: 2779 ggataatccaccgaaaggatagatagaacagtattagcagtgaccaatggaggttccttc 2838
||||||||||| |||||||| || || ||||| || || |||||||| |||||||||||
Sbjct: 245 ggataatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttccttt 186
Query: 2839 aagggatcaaccgtactgacaaagaaatcaacaggggcgagttgagaaggatgcccttcc 2898
||||||||||||||||||||||||| |||| || || || ||||| || || ||||||
Sbjct: 185 gagggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgaccttcc 126
Query: 2899 ttgtcaaaccttaaactcagccggtcaagataggtttccctctcgataggaaaccacttt 2958
||||||||||||| || ||||| || || || || ||||| || |||| |||||||
Sbjct: 125 ttgtcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccacttt 66
Query: 2959 ggaaactggtcaagaatccaagacatggcaaaccaaatttcacagatcacagatatg 3015
|| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 65 gggaactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatg 9
>gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_A05_A002 5', mRNA sequence
Length = 594
Score = 396 bits (200), Expect = e-108
Identities = 442/522 (84%), Gaps = 3/522 (0%)
Strand = Plus / Minus
Query: 3304 agatccttggaagggtccatagacctcggttgcacaggaaggttgggatccgcgtacggg 3363
||||||||||| |||||||||||||| ||||||||||| | | |||||||||| || ||
Sbjct: 589 agatccttggatgggtccatagacctgggttgcacaggtaagctgggatccgcataagga 530
Query: 3364 agagggtgaatcctcttccccccgccacccacgaacgagggcacaagggcgtgctggtcc 3423
|| || || |||||||| ||||| || |||| ||| || ||||| || |||||||| |||
Sbjct: 529 aggggatggatcctctttcccccaccgcccatgaaagaaggcaccagcgcgtgctgctcc 470
Query: 3424 ggcgggatgtcatcgaccatctgtccgttggtgaggaggggaacattggggatgggctgg 3483
|| |||||||||||||||||||| || ||||||||||| |||||||||||| || |||||
Sbjct: 469 ggtgggatgtcatcgaccatctgcccattggtgaggagtggaacattggggttgagctgg 410
Query: 3484 aatggctgcggcacgccgtcgaggtcggcgccgcggccgtagctcatgtgggcgtggagc 3543
|| || || |||||||| | |||| | || ||||||||||||||||| | | ||||
Sbjct: 409 aaaggttgtggcacgccattagcgtcgcctccacggccgtagctcatgtgaccatagagc 350
Query: 3544 atggactcggcgaggtactgggagtcgtgcttgtcgccccagttgaactcgttctccagg 3603
||||||||||| | |||| ||||| || | || ||||||||||||||| || | |
Sbjct: 349 atggactcggccacagactgcgagtcatg---gccgttccagttgaactcgttgtcgatg 293
Query: 3604 tcgtcgacgccgtcctcctcctcgtccccgggcacgcgcgcgcaccccttgaagcgcttg 3663
|| |||||||||||||||||||| || |||| ||| ||| ||| ||||||| |||||||
Sbjct: 292 tcatcgacgccgtcctcctcctcatcaccggtcacacgctggcagcccttgaggcgcttg 233
Query: 3664 aagcgggtcttgcactgggggcagttctgcgtgccctcgcggcgctcgtactcgtagcag 3723
| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 232 tatcgggtcttgcactgggggcagttctgcgtgccctcccggcgttcgtactcgtagcag 173
Query: 3724 tcccggcagatggggaaggcgcactcgttgcaggccacgaaaggctccccgtcggggttg 3783
|||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 172 tcccggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgccgggggca 113
Query: 3784 cgccccacgtcgtcgccgcaaatctggcacacctggccgttc 3825
| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 112 aggccgacgtcgtcgccgcaaatctggcacacctgcccgttc 71
>gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f064o11, DNA
sequence
Length = 656
Score = 381 bits (192), Expect = e-103
Identities = 207/212 (97%)
Strand = Plus / Plus
Query: 3439 accatctgtccgttggtgaggaggggaacattggggatgggctggaatggctgcggcacg 3498
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 81 accatctgtccgttggtgaggagaggaacattagggatgggctggaatggttgcggcacg 140
Query: 3499 ccgtcgaggtcggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgagg 3558
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 141 ccgtcgaggtcggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgacg 200
Query: 3559 tactgggagtcgtgcttgtcgccccagttgaactcgttctccaggtcgtcgacgccgtcc 3618
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactgggagtcgtgcttgtcgctccagttgaactcgttctccaggtcgtcgacgccgtcc 260
Query: 3619 tcctcctcgtccccgggcacgcgcgcgcaccc 3650
||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcctcgtccccgggcacgcgcgcgcaccc 292
Score = 339 bits (171), Expect = 1e-090
Identities = 193/199 (96%), Gaps = 1/199 (0%)
Strand = Plus / Plus
Query: 3649 cccttgaagcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcggcgc 3708
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 402 cccttgaggcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcgtcgc 461
Query: 3709 tcgtactcgtagcagtcccggcagatggggaaggcgcactcgttgca-ggccacgaaagg 3767
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 462 tcgtactcgtagcagtcccggcagatggggaaggcgcactcgttgcagggccacgaaggg 521
Query: 3768 ctccccgtcggggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccg 3827
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctccccgtccgggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccg 581
Query: 3828 ctggtccatgggcttcggc 3846
||||||||| |||||||||
Sbjct: 582 ctggtccatcggcttcggc 600
>gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f064o11, DNA
sequence
Length = 692
Score = 353 bits (178), Expect = 8e-095
Identities = 193/198 (97%)
Strand = Plus / Minus
Query: 3649 cccttgaagcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcggcgc 3708
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 cccttgaggcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcgtcgc 501
Query: 3709 tcgtactcgtagcagtcccggcagatggggaaggcgcactcgttgcaggccacgaaaggc 3768
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 tcgtactcgtagcagtcccggcagatggggaaggcgcactcgttgcaggccacgaagggc 441
Query: 3769 tccccgtcggggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccgc 3828
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccccgtccgggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccgc 381
Query: 3829 tggtccatgggcttcggc 3846
|||||||| |||||||||
Sbjct: 380 tggtccatcggcttcggc 363
Score = 65.9 bits (33), Expect = 3e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 3846 ccctggctcgccatcgcggcggatgacgacgag 3878
|||||||||||||||||||||||||||||||||
Sbjct: 248 ccctggctcgccatcgcggcggatgacgacgag 216
Score = 46.1 bits (23), Expect = 0.024
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 3628 tccccgggcacgcgcgcgcaccc 3650
|||||||||||||||||||||||
Sbjct: 692 tccccgggcacgcgcgcgcaccc 670
>gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 349 bits (176), Expect = 1e-093
Identities = 347/404 (85%)
Strand = Plus / Minus
Query: 1426 ccaagagcccaccgaagaacctggtgaagacgatcggaaagattgagaggtgcggaacct 1485
||||||||||| ||||| | |||| ||| || || |||||||| |||||||| ||||||
Sbjct: 465 ccaagagcccaacgaaggtcttggtcaagccggtcagaaagattcagaggtgcagaacct 406
Query: 1486 ttgaaggcggcccgtttaggtatgcagtaaattgaccgccaaccatggcagtgcatctta 1545
||||| || ||||| || || ||||||||||| |||||||||||||||||||||||||||
Sbjct: 405 ttgaatgcagcccgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatctta 346
Query: 1546 aacccagtaagaatatcttctgtgactgatccataaatccaaccaatatcttttccccag 1605
|| ||||| | ||||| ||||| | ||||||||||||||| ||||| ||||| ||||||
Sbjct: 345 aatccagtcaagatatcctctgtaattgatccataaatccagccaatctctttcccccag 286
Query: 1606 cctgttttgtcttcatatccacaactgatgacatgtatagcttccttcagaagagaagct 1665
| || |||||||| || || || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 285 tcagtcttgtcttcgtagccgcagctgattacatgtatagcttcctttagaagagaagct 226
Query: 1666 ggactggcactcttcagggttccaccattctcaagaagtgtggatgcaacaaaaactgaa 1725
||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 225 ggacttgcactcctcagggtcccaccattctcaagaagtgttgatgcaacaaaaacagat 166
Query: 1726 gactggccaaatttcttttccaacttctgttgatttacaatactagccttttcattttca 1785
||||| |||||||||||||| | ||||||||||||||||| | |||||| ||| |||
Sbjct: 165 gactgcccaaatttcttttctagtttctgttgatttacaattccagccttctcaacgtca 106
Query: 1786 gctcctggagcggcttcatcaatttcaccaagagcatatgcagg 1829
|| |||||||| |||| ||||||||||| | ||||||||||||
Sbjct: 105 gcacctggagcaccttcctcaatttcacccaaagcatatgcagg 62
>gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 391
Score = 341 bits (172), Expect = 3e-091
Identities = 322/372 (86%)
Strand = Plus / Minus
Query: 2073 tttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaat 2132
||||||||||||||| |||||||| ||||| ||||| || ||||||||||| || |||||
Sbjct: 391 tttcatgttgatatcaaaaaagacgacattcctgtttgcgtatcgatcatgacggtcaat 332
Query: 2133 cccatcaaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatccat 2192
|||||||| || ||||| ||||| |||||||| |||||||| || | ||||||||||||
Sbjct: 331 accatcaaacctctgagggaactggacatagcacactttcttccccaccaaaggatccat 272
Query: 2193 cataaaacacattgcttcctttatagccttactattattgatatagtgatcacaatccaa 2252
||| |||||||| || || ||||| ||||| ||||| ||||| |||||||||||||||||
Sbjct: 271 catgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacaatccaa 212
Query: 2253 gttcagcaaataaggagcattagttagtacagcagagactcggaccaatgcattcatagc 2312
||||| | || |||||||| | || ||||||||||| ||||||| ||||||||| ||
Sbjct: 211 gttcaataggtacggagcatttgataagacagcagagacacggaccagtgcattcatggc 152
Query: 2313 accagccttcttgtgatggttgtagcctggccgtttttctcttgaaacataaaccaatcg 2372
||||||||||||||||||||| || ||||||| |||||||| || |||||||| | ||
Sbjct: 151 accagccttcttgtgatggttataacctggcctcttttctctcgagacataaacaaggcg 92
Query: 2373 aggcagctcatttccttccacatcatggccaccactttgaccaaggaaaacctgaatcat 2432
||||| ||||||||||||||||||| | ||||||||||| |||||||| |||||||||||
Sbjct: 91 aggcaactcatttccttccacatcacgaccaccactttggccaaggaatacctgaatcat 32
Query: 2433 tccaggatgatc 2444
||||||||||||
Sbjct: 31 tccaggatgatc 20
>gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 542
Score = 325 bits (164), Expect = 2e-086
Identities = 229/250 (91%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||| ||
Sbjct: 247 aaatatgggcaca---catctgcaaaattacttcttcgagaacacactgatggggaactc 191
Query: 643 cacgtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcatcc 702
||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 190 cacatgctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatcc 131
Query: 703 ttcgcaaggaaagggtcgatccggacccaaagcagcgagaagatcgaagccaggaggatg 762
|||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 130 ttcgcaaggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatg 71
Query: 763 gaccagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaac 822
||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 70 gaccacacaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaat 11
Query: 823 gggtaaagat 832
||||||||||
Sbjct: 10 gggtaaagat 1
Score = 214 bits (108), Expect = 5e-053
Identities = 198/224 (88%), Gaps = 13/224 (5%)
Strand = Plus / Minus
Query: 261 acaactttgcagatgcagagcaattcatactcaaaacaactgtctgttcggctcaccgat 320
||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||
Sbjct: 542 acaactttgcagatgtagagcagttcatactcaaa-caactttctgttcggctcaccgat 484
Query: 321 tgaagtatccacccaccaaaactaataaagaatgctgaacaattgaactcggtcatcgat 380
| ||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 483 t-aagtatccatcca---aaactaataaagaatgctgaacaattgaactcaggcatcgat 428
Query: 381 tgattgattggtc----gcgatcttccctagtatattcgtggccgaactgcacaaggttg 436
||| |||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 427 tga----ttggtctcgatcgatcttctctagtatattcgtggccgaactgcacaaggttg 372
Query: 437 ccgcagcctccggtttgcccaatactgcactcacgaggctgagc 480
||||||||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 371 tcgcagcctccgctttgcccaatattgcagtcatgaggctgagc 328
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 286 tctccccgtgtttctatctacagagg 261
>gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 325 bits (164), Expect = 2e-086
Identities = 317/368 (86%)
Strand = Plus / Minus
Query: 1462 gaaagattgagaggtgcggaacctttgaaggcggcccgtttaggtatgcagtaaattgac 1521
|||||||| |||||||| ||||||||||| || | ||| || || ||||||||||| |||
Sbjct: 449 gaaagattcagaggtgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagac 390
Query: 1522 cgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccataa 1581
|||||||||||||||||||||||||| ||||| | ||||| ||||| | ||||||||||
Sbjct: 389 cgccaaccatggcagtgcatcttaaatccagtcaagatatcctctgtaattgatccataa 330
Query: 1582 atccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatgacatgt 1641
||||| ||||| ||||| |||||| | || |||||||| || || || ||||| ||||||
Sbjct: 329 atccagccaatctctttcccccagtcagtcttgtcttcgtagccgcagctgattacatgt 270
Query: 1642 atagcttccttcagaagagaagctggactggcactcttcagggttccaccattctcaaga 1701
||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 269 atagcttcctttagaagagaagctggacttgcactcctcagggtcccaccattctcaaga 210
Query: 1702 agtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttctgttgattt 1761
||||| |||||||||||||| || ||||| |||||||||||||| | ||||||||| ||
Sbjct: 209 agtgttgatgcaacaaaaacagatgactgcccaaatttcttttctagtttctgttgactt 150
Query: 1762 acaatactagccttttcattttcagctcctggagcggcttcatcaatttcaccaagagca 1821
||||| | |||||| ||| ||||| |||||||| |||| ||||||||||| | ||||
Sbjct: 149 acaattccagccttctcaacgtcagcacctggagcaccttcctcaatttcacccaaagca 90
Query: 1822 tatgcagg 1829
||||||||
Sbjct: 89 tatgcagg 82
>gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_F11_A002 5', mRNA sequence
Length = 749
Score = 321 bits (162), Expect = 3e-085
Identities = 362/428 (84%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 3451 ttggtgaggaggggaacattggggatgggctggaatggctgcggcacgccgtcgaggtcg 3510
||||||||||| |||||||||||| || ||||||| || || |||||||| | ||||
Sbjct: 744 ttggtgaggagtggaacattggggttgagctggaaaggttgtggcacgccattagcgtcg 685
Query: 3511 gcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgaggtactgggagtcg 3570
| || ||||||||||||||||| | | ||||||||||||||| | |||| |||||
Sbjct: 684 cctccacggccgtagctcatgtgaccatagagcatggactcggccacagactgcgagtca 625
Query: 3571 tgcttgtcgccccagttgaactcgttctccaggtcgtcgacgccgtcctcctcctcgtcc 3630
|| | || ||||||||||||||| || | ||| |||||||||||||||||||| ||
Sbjct: 624 tg---gccgttccagttgaactcgttgtcgatgtcatcgacgccgtcctcctcctcatca 568
Query: 3631 ccgggcacgcgcgcgcaccccttgaagcgcttgaagcgggtcttgcactgggggcagttc 3690
|||| ||| ||| ||| ||||||| ||||||| | ||||||||||||||||||||||||
Sbjct: 567 ccggtcacacgctggcagcccttgaggcgcttgtatcgggtcttgcactgggggcagttc 508
Query: 3691 tgcgtgccctcgcggcgctcgtactcgtagcagtcccggcagatggggaaggcgcactcg 3750
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 507 tgcgtgccctcccggcgctcgtactcgtagcagtcccggcagacggggaaggcgcactcg 448
Query: 3751 ttgcaggccacgaaaggctccccgtcggggttgcgccccacgtcgtcgccgcaaatctgg 3810
||||| |||||||| ||||||||| ||||| | || |||||||||||||||||||||
Sbjct: 447 ttgcacgccacgaagggctccccgccgggggcaaggccgacgtcgtcgccgcaaatctgg 388
Query: 3811 cacacctggccgttccgctggtccatgggcttcggccctggctcgccatcgcggcggatg 3870
|||||||| |||||| ||| || ||||||||||| || ||||| ||||||||||||
Sbjct: 387 cacacctgcccgttctgctcccgcagcggcttcggcccgggatcgccgtcgcggcggatg 328
Query: 3871 acgacgag 3878
||||||||
Sbjct: 327 acgacgag 320
>gb|CW462662.1|CW462662 fsbb001f210o15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f210o15, DNA
sequence
Length = 344
Score = 319 bits (161), Expect = 1e-084
Identities = 192/201 (95%), Gaps = 1/201 (0%)
Strand = Plus / Plus
Query: 3450 gttggtgaggaggggaacattggggatgggctggaatggctgcggcacgccgtcgaggtc 3509
|||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||| |
Sbjct: 1 gttggtgaggagaggaa-attagggatgggctggaatggttgcggcacgccgtcgagggc 59
Query: 3510 ggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgaggtactgggagtc 3569
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 60 ggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgacgtactgggagtc 119
Query: 3570 gtgcttgtcgccccagttgaactcgttctccaggtcgtcgacgccgtcctcctcctcgtc 3629
||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 120 gtggttgtcgctccagttgaactcgttctccaggtcggcgacgccgtcctcctcctcgtc 179
Query: 3630 cccgggcacgcgcgcgcaccc 3650
|||||||||||||||||||||
Sbjct: 180 cccgggcacgcgcgcgcaccc 200
Score = 46.1 bits (23), Expect = 0.024
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 3649 cccttgaagcgcttgaagcgggtcttgcactgggg 3683
||||||| | ||||| |||||||||||||||||||
Sbjct: 310 cccttgaggggcttggagcgggtcttgcactgggg 344
>gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 205
Score = 319 bits (161), Expect = 1e-084
Identities = 188/197 (95%)
Strand = Plus / Minus
Query: 2654 gctcaaggctatatcttttgcagaaaggaacccatttctttgcaaattcagatgtttcag 2713
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gctcaaggctataccttttgcagaaaggaacccatttctttgcaaattcagatgtttcag 146
Query: 2714 acaatgcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaaccttat 2773
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 145 ccaatgcttcaaatgtcagcatggcagcaccatcatcagaaacatagcatgaaaccttat 86
Query: 2774 caactggataatccaccgaaaggatagatagaacagtattagcagtgaccaatggaggtt 2833
|||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 85 caactggataatccaccgaaaggatagatagaacagtatttgctgtgaataatggaggtt 26
Query: 2834 ccttcaagggatcaacc 2850
| |||||||||||||||
Sbjct: 25 ctttcaagggatcaacc 9
>gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_6_E10_A012 5', mRNA sequence
Length = 675
Score = 307 bits (155), Expect = 4e-081
Identities = 164/167 (98%)
Strand = Plus / Minus
Query: 3712 tactcgtagcagtcccggcagatggggaaggcgcactcgttgcaggccacgaaaggctcc 3771
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 675 tactcgtagcagtcccggcagatggggaaggcgcactcgttgcaggccacgaagggctcc 616
Query: 3772 ccgtcggggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccgctgg 3831
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ccgtccgggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttccgctgg 556
Query: 3832 tccatgggcttcggccctggctcgccatcgcggcggatgacgacgag 3878
||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tccatcggcttcggccctggctcgccatcgcggcggatgacgacgag 509
>gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 5', mRNA sequence
Length = 752
Score = 307 bits (155), Expect = 4e-081
Identities = 278/319 (87%)
Strand = Plus / Minus
Query: 1939 caccactttggccagcagttgcaagttcttgatggtggcttctttgttttgggagcatcg 1998
|||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 334 caccacttgggccagcagttgcaagttcttgatggtggcttcttcgttttaggagcatca 275
Query: 1999 tagccatataatgcctgccttctgaagacacatccagtacccacataaattgggccctgg 2058
|| ||||| | |||||||| |||||| |||||||||||||||||||| || || || ||
Sbjct: 274 taaccatacagtgcctgccgtctgaaaacacatccagtacccacatagatgggtccttga 215
Query: 2059 ataccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcatatcga 2118
||||| ||||||||||||||||||||||| |||||||| || || ||||| | ||||||
Sbjct: 214 ataccgtccaaacctttcatgttgatatcaaaaaagacgacgttcctgtttgtgtatcga 155
Query: 2119 tcatggcgatcaatcccatcaaatctttgaggaaactgcacatagcaaactttctttcca 2178
||||| || ||||| |||||||| || ||||| ||||| |||||||| |||||||| ||
Sbjct: 154 tcatgacggtcaataccatcaaacctctgagggaactggacatagcacactttcttcccc 95
Query: 2179 agcaaaggatccatcataaaacacattgcttcctttatagccttactattattgatatag 2238
| ||||||||||||||| |||||||| || || ||||| ||||| ||||| ||||| |||
Sbjct: 94 accaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtag 35
Query: 2239 tgatcacaatccaagttca 2257
|||||||||||||||||||
Sbjct: 34 tgatcacaatccaagttca 16
Score = 283 bits (143), Expect = 6e-074
Identities = 269/311 (86%)
Strand = Plus / Minus
Query: 1519 gaccgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatcca 1578
||||||||||||||||||||||||||||| ||||| | ||||| ||||| | |||||||
Sbjct: 748 gaccgccaaccatggcagtgcatcttaaatccagtcaagatatcctctgtaattgatcca 689
Query: 1579 taaatccaaccaatatcttttccccagcctgttttgtcttcatatccacaactgatgaca 1638
|||||||| ||||| ||||| |||||| | || | |||||| || || || ||||| |||
Sbjct: 688 taaatccagccaatctctttcccccagtcagtctagtcttcgtagccgcagctgattaca 629
Query: 1639 tgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccattctca 1698
|||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 628 tgtatagcttcctttagaagagaagctggacttgcactcctcagggtcccaccattctca 569
Query: 1699 agaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttctgttga 1758
|||||||| |||||||||||||| || ||||| |||||||||||||| | |||||||||
Sbjct: 568 agaagtgttgatgcaacaaaaacagatgactgcccaaatttcttttctagtttctgttga 509
Query: 1759 tttacaatactagccttttcattttcagctcctggagcggcttcatcaatttcaccaaga 1818
|||||||| | |||||| ||| ||||| |||||||| |||| ||||||||||| | |
Sbjct: 508 tttacaattccagccttctcaacgtcagcacctggagcaccttcctcaatttcacccaaa 449
Query: 1819 gcatatgcagg 1829
|||||||||||
Sbjct: 448 gcatatgcagg 438
>gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 419
Score = 305 bits (154), Expect = 2e-080
Identities = 273/313 (87%)
Strand = Plus / Minus
Query: 2599 accttgtctttcaggtagtctatcttctgttggaagtaccactctggagcacgaggctca 2658
||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||
Sbjct: 366 accttgtctttcaggtagtgtatcttntgttggaagtaccactcagtagcacgaggctca 307
Query: 2659 aggctatatcttttgcagaaaggaacccatttctttgcaaattcagatgtttcagacaat 2718
|| || | |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 306 agattaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaac 247
Query: 2719 gcttcaaatgtcagcatggcagcaccatcatcagaaacgtagcacgaaaccttatcaact 2778
|||||||| || ||||| |||||||||||||||||||| ||||| || |||||| |||
Sbjct: 246 gcttcaaaggtaagcattgcagcaccatcatcagaaacatagcaggagaccttagtaacc 187
Query: 2779 ggataatccaccgaaaggatagatagaacagtattagcagtgaccaatggaggttccttc 2838
||||||||||| |||||||| || || ||||| || || |||||||| |||||||||||
Sbjct: 186 ggataatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttccttt 127
Query: 2839 aagggatcaaccgtactgacaaagaaatcaacaggggcgagttgagaaggatgcccttcc 2898
|||||||||||||| |||||||||| |||| || || || ||||| || || ||||||
Sbjct: 126 gagggatcaaccgtaatgacaaagaagtcaatcggagcaagctgagagggttgaccttcc 67
Query: 2899 ttgtcaaacctta 2911
|||||||||||||
Sbjct: 66 ttgtcaaacctta 54
>gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 285
Score = 295 bits (149), Expect = 2e-077
Identities = 245/277 (88%)
Strand = Plus / Minus
Query: 1340 tgtacgaaaacctttccaggaactttagtccaccaccatacccataccagagagggcagt 1399
|||| ||||| |||||||| || || || ||||| |||||||||||||| |||||||| |
Sbjct: 285 tgtaggaaaatctttccagaaatttcaggccaccgccatacccataccaaagagggcaat 226
Query: 1400 ggttgctgaagaaaatttcaattgaaccaagagcccaccgaagaacctggtgaagacgat 1459
| ||||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||
Sbjct: 225 gattgctgaagaagatttcaatagacccaagagcccaacgaagcacctggtgaagacgat 166
Query: 1460 cggaaagattgagaggtgcggaacctttgaaggcggcccgtttaggtatgcagtaaattg 1519
| |||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 165 ctgaaagattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattg 106
Query: 1520 accgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtgactgatccat 1579
||||||||||||| || ||||| || || ||||| |||||||||||||| ||||||||||
Sbjct: 105 accgccaaccatgacaatgcattttgaaaccagttagaatatcttctgtaactgatccat 46
Query: 1580 aaatccaaccaatatcttttccccagcctgttttgtc 1616
||||||| ||||| |||||||||||| |||| |||||
Sbjct: 45 aaatccagccaatctcttttccccagtctgtcttgtc 9
>gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 293 bits (148), Expect = 6e-077
Identities = 265/304 (87%)
Strand = Plus / Minus
Query: 646 gtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcatccttc 705
|||||||| |||||||||||||||| |||||||||||| | || ||||||||||||||
Sbjct: 306 gtgctgacatcctagttgcaatccaaaccacactcctcaagaagtggaccatcatccttt 247
Query: 706 gcaaggaaagggtcgatccggacccaaagcagcgagaagatcgaagccaggaggatggac 765
||||||||||| || ||||| |||||||| || |||||||| |||||||| || ||||||
Sbjct: 246 gcaaggaaaggatcaatccgaacccaaaggagtgagaagattgaagccagcagaatggac 187
Query: 766 cagacaatgacaatcgttggcgtcctgttctgcctcccaaccagacccttgaggaacggg 825
|| || |||||||| ||||| |||||||| ||||| ||||||| ||| |||||||| ||
Sbjct: 186 cacacgatgacaattgttggtgtcctgttttgccttccaaccaaacctttgaggaaggga 127
Query: 826 taaagatggacgatcacccaaaatgcaaagaagagcttcccgaacagggggccccatgat 885
|| |||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 126 tacagatggacaatcacccaaaatgcaaagaagagcttcccaaagaggggaccccatgac 67
Query: 886 tcatatccgttgttgatcgcattggaaatgccagctaccactccaatgaagttcagtagg 945
||||||||||| ||||| || ||||||| ||||| ||||| ||||||||||||| ||||
Sbjct: 66 tcatatccgttattgattgcgttggaaacaccagcaaccacaccaatgaagttcaatagg 7
Query: 946 agca 949
||||
Sbjct: 6 agca 3
>gb|CL155293.1|CL155293 104_341_10782024_116_31472_120 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782024, DNA
sequence
Length = 704
Score = 250 bits (126), Expect = 8e-064
Identities = 138/142 (97%)
Strand = Plus / Plus
Query: 3439 accatctgtccgttggtgaggaggggaacattggggatgggctggaatggctgcggcacg 3498
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 560 accatctgtccgttggtgaggagaggaacattagggatgggctggaatggttgcggcacg 619
Query: 3499 ccgtcgaggtcggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgagg 3558
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 ccgtcgaggtcggcgccgcggccgtagctcatgtgggcgtggagcatggactcggcgacg 679
Query: 3559 tactgggagtcgtgcttgtcgc 3580
||||||||||||||||||||||
Sbjct: 680 tactgggagtcgtgcttgtcgc 701
Score = 232 bits (117), Expect = 2e-058
Identities = 155/167 (92%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 3175 agtggtagatctgcatcatcaccatcatcg---ccgccgccatcgttcctcgtctggtgc 3231
|||||||||||||||||||| ||||||||| || || || |||||||||| |||||||
Sbjct: 78 agtggtagatctgcatcatcgccatcatcgttaccaccaccgtcgttcctcgcctggtgc 137
Query: 3232 atcctctcctgcttctgcttccagctctccatcctctccttccatgctacgctcccgtag 3291
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 138 atcctctcctgcttctgcttccagctctccatcctctccttccacgctacactgccgtag 197
Query: 3292 ccatatgcggcgagatccttggaagggtccatagacctcggttgcac 3338
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 198 ccatatgcggcgagatccttggaagggtccatagaccttggttgcac 244
Score = 159 bits (80), Expect = 2e-036
Identities = 98/104 (94%)
Strand = Plus / Plus
Query: 3338 caggaaggttgggatccgcgtacgggagagggtgaatcctcttccccccgccacccacga 3397
||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| ||
Sbjct: 348 caggaaggttgggatccgcgtacggaagagggtgaatcctcttcccaccaccacccatga 407
Query: 3398 acgagggcacaagggcgtgctggtccggcgggatgtcatcgacc 3441
||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 408 acgagggcacaagtgcgtgctgctccggcgggatgtcatcgacc 451
>gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f012e11, DNA
sequence
Length = 826
Score = 244 bits (123), Expect = 5e-062
Identities = 174/191 (91%)
Strand = Plus / Minus
Query: 1894 gtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggccag 1953
|||||||||||| |||||| |||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 323 gtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccacttcggccag 264
Query: 1954 cagttgcaagttcttgatggtggcttctttgttttgggagcatcgtagccatataatgcc 2013
||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 263 cagttgcaagtccttgatggtggcttctttgttttgggggcatcataaccatataatgcc 204
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
|||||||| || |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 203 tgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatccaaacct 144
Query: 2074 ttcatgttgat 2084
||||| |||||
Sbjct: 143 ttcatattgat 133
Score = 206 bits (104), Expect = 1e-050
Identities = 170/192 (88%)
Strand = Plus / Minus
Query: 1600 ccccagcctgttttgtcttcatatccacaactgatgacatgtatagcttccttcagaaga 1659
|||||| |||| ||||||||||| || ||||| ||||||||||||||||| |||| ||||
Sbjct: 751 ccccagtctgtcttgtcttcataaccgcaactaatgacatgtatagcttctttcaaaaga 692
Query: 1660 gaagctggactggcactcttcagggttccaccattctcaagaagtgtggatgcaacaaaa 1719
||||| ||||| |||||||||| ||||||||||||||| || |||||||||| ||||||
Sbjct: 691 gaagcaggacttgcactcttcaaggttccaccattctcgagcagtgtggatgtaacaaag 632
Query: 1720 actgaagactggccaaatttcttttccaacttctgttgatttacaatactagccttttca 1779
|| |||||||| |||||||||||||| || || |||||||||||||||| ||| ||||||
Sbjct: 631 acagaagactgaccaaatttcttttctaatttttgttgatttacaataccagctttttca 572
Query: 1780 ttttcagctcct 1791
|| |||||||||
Sbjct: 571 ttctcagctcct 560
Score = 93.7 bits (47), Expect = 1e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1789 cctggagcggcttcatcaatttcaccaagagcatatgcaggggcttgattttcctttttc 1848
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 425 cctggagcagcttcatcaatttcaccaagagcatatgcaggggattgattttcttctttc 366
Query: 1849 ttaaaaa 1855
|| ||||
Sbjct: 365 ttgaaaa 359
Score = 52.0 bits (26), Expect = 4e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 2085 atcgaaaaagacaacatttctgttagcata 2114
|||||||||||||||||| |||||||||||
Sbjct: 30 atcgaaaaagacaacattcctgttagcata 1
>gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890237, DNA
sequence
Length = 578
Score = 242 bits (122), Expect = 2e-061
Identities = 188/210 (89%)
Strand = Plus / Plus
Query: 2089 aaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatctttga 2148
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 aaaaagacaacattcctgttagcatatcggtcatggcgatcaatcccatcaaatctttga 384
Query: 2149 ggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacattgct 2208
|| ||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 385 gggaactgtacataacaaaccttctttcctagtaaagggtccatcataaaacacattgct 444
Query: 2209 tcctttatagccttactattattgatatagtgatcacaatccaagttcagcaaataagga 2268
||| |||||||||| || || ||||| || ||||||||||||||||| | |||| | |||
Sbjct: 445 tccattatagccttgctgttgttgatgtactgatcacaatccaagtttaacaaagatgga 504
Query: 2269 gcattagttagtacagcagagactcggacc 2298
||| | |||||||||| |||||||||||||
Sbjct: 505 gcacttgttagtacaggagagactcggacc 534
Score = 236 bits (119), Expect = 1e-059
Identities = 173/191 (90%)
Strand = Plus / Plus
Query: 1894 gtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggccag 1953
|||||||||||| |||||| |||||||| ||||||||||||| ||||||||| || |||
Sbjct: 28 gtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccacttcggacag 87
Query: 1954 cagttgcaagttcttgatggtggcttctttgttttgggagcatcgtagccatataatgcc 2013
||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 88 cagttgcaagtccttgatggtggcttctttgttttgggggcatcataaccatataatgcc 147
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
|||||||| || |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 148 tgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatccaaacct 207
Query: 2074 ttcatgttgat 2084
||||| |||||
Sbjct: 208 ttcatattgat 218
>gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_H04_A002 3', mRNA sequence
Length = 572
Score = 236 bits (119), Expect = 1e-059
Identities = 173/191 (90%)
Strand = Plus / Minus
Query: 1894 gtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggccag 1953
|||||||||||| |||||| |||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 445 gtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccacttcggccag 386
Query: 1954 cagttgcaagttcttgatggtggcttctttgttttgggagcatcgtagccatataatgcc 2013
||||||||||| |||| ||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 385 cagttgcaagtccttggtggtggcttctttgttttgggggcatcataaccatataatgcc 326
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
|||||||| || |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 325 tgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatccaaacct 266
Query: 2074 ttcatgttgat 2084
||||| |||||
Sbjct: 265 ttcatattgat 255
Score = 210 bits (106), Expect = 7e-052
Identities = 130/138 (94%)
Strand = Plus / Minus
Query: 2085 atcgaaaaagacaacatttctgttagcatatcgatcatggcgatcaatcccatcaaatct 2144
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 152 atcgaaaaagacaacattcctgttagcatatcggtcatggcgatcaatcccatcaaatct 93
Query: 2145 ttgaggaaactgcacatagcaaactttctttccaagcaaaggatccatcataaaacacat 2204
|||||| ||||| ||||||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 92 ttgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacat 33
Query: 2205 tgcttcctttatagcctt 2222
||||||||||||||||||
Sbjct: 32 tgcttcctttatagcctt 15
Score = 119 bits (60), Expect = 2e-024
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 1764 aatactagccttttcattttcagctcctggagcggcttcatcaatttcaccaagagcata 1823
||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 572 aataccagctttttcattctcagctcctggagcagcttcatcaatttcaccaagagcata 513
Query: 1824 tgcaggggcttgattttcctttttcttaaaaa 1855
|||||||| ||||||||| | |||||| ||||
Sbjct: 512 tgcaggggattgattttcttctttcttgaaaa 481
>gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_A05_A002 3', mRNA sequence
Length = 458
Score = 236 bits (119), Expect = 1e-059
Identities = 173/191 (90%)
Strand = Plus / Minus
Query: 1894 gtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggccag 1953
|||||||||||| |||||| |||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 316 gtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccacttcggccag 257
Query: 1954 cagttgcaagttcttgatggtggcttctttgttttgggagcatcgtagccatataatgcc 2013
||||||||||| |||| ||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 256 cagttgcaagtccttggtggtggcttctttgttttgggggcatcataaccatataatgcc 197
Query: 2014 tgccttctgaagacacatccagtacccacataaattgggccctggataccatccaaacct 2073
|||||||| || |||||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct: 196 tgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatccaaacct 137
Query: 2074 ttcatgttgat 2084
||||| |||||
Sbjct: 136 ttcatattgat 126
Score = 135 bits (68), Expect = 3e-029
Identities = 92/100 (92%)
Strand = Plus / Minus
Query: 1756 tgatttacaatactagccttttcattttcagctcctggagcggcttcatcaatttcacca 1815
||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 451 tgatttacaataccagctttttcattctcagctcctggagcagcttcatcaatttcacca 392
Query: 1816 agagcatatgcaggggcttgattttcctttttcttaaaaa 1855
|||||||||||||||| ||||||||| | |||||| ||||
Sbjct: 391 agagcatatgcaggggattgattttcttctttcttgaaaa 352
>gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 217
Score = 234 bits (118), Expect = 5e-059
Identities = 187/210 (89%)
Strand = Plus / Minus
Query: 1627 caactgatgacatgtatagcttccttcagaagagaagctggactggcactcttcagggtt 1686
||||| ||||||||||||||||| |||| ||||||||| ||||| |||||||||| ||||
Sbjct: 210 caactaatgacatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggtt 151
Query: 1687 ccaccattctcaagaagtgtggatgcaacaaaaactgaagactggccaaatttcttttcc 1746
||||||||||| || |||||||||| |||||| || ||||| || ||||||||||||||
Sbjct: 150 ccaccattctcgagcagtgtggatgtaacaaagacagaagagtgaccaaatttcttttct 91
Query: 1747 aacttctgttgatttacaatactagccttttcattttcagctcctggagcggcttcatca 1806
|| || ||||||||||||| || ||| |||||||| |||||||||||||| |||||||||
Sbjct: 90 aatttttgttgatttacaagaccagctttttcattctcagctcctggagcagcttcatca 31
Query: 1807 atttcaccaagagcatatgcaggggcttga 1836
|||| |||||||||||||||||||| ||||
Sbjct: 30 atttgaccaagagcatatgcaggggattga 1
>gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488203, DNA
sequence
Length = 540
Score = 232 bits (117), Expect = 2e-058
Identities = 162/177 (91%)
Strand = Plus / Plus
Query: 3649 cccttgaagcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcggcgc 3708
||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 158 cccttgaggcgcttgtatcgggtcttgcactgggggcagttctgcgtgccctcccggcgc 217
Query: 3709 tcgtactcgtagcagtcccggcagatggggaaggcgcactcgttgcaggccacgaaaggc 3768
||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||
Sbjct: 218 tcgtactcgtagcagtcccggcagacggggaaggcgcactcgttgcacgccacgaagggc 277
Query: 3769 tccccgtcggggttgcgccccacgtcgtcgccgcaaatctggcacacctggccgttc 3825
|||||| ||||| | || ||||||||||||||||||||||||||||| ||||||
Sbjct: 278 tccccgccgggggcaaggccgacgtcgtcgccgcaaatctggcacacctgcccgttc 334
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3853 tcgccatcgcggcggatgacgacgag 3878
||||| ||||||||||||||||||||
Sbjct: 468 tcgccgtcgcggcggatgacgacgag 493
>gb|CD423780.1|CD423780 SA1_1_G10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_1_G10_A002 3', mRNA sequence
Length = 708
Score = 232 bits (117), Expect = 2e-058
Identities = 205/231 (88%), Gaps = 5/231 (2%)
Strand = Plus / Minus
Query: 250 gatgacaaacaacaactttgcagatgcagagcaattcatactcaaaacaactgtctgttc 309
||||| |||||||||||||||||||| |||||| |||||||||||| ||||| |||||||
Sbjct: 445 gatgataaacaacaactttgcagatgtagagcagttcatactcaaa-caactttctgttc 387
Query: 310 ggctcaccgattgaagtatccacccaccaaaactaataaagaatgctgaacaattgaact 369
|||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 386 ggctcaccgatt-aagtatccatcca---aaactaataaagaatgctgaacaattgaact 331
Query: 370 cggtcatcgattgattgattggtcgcgatcttccctagtatattcgtggccgaactgcac 429
| | |||||| |||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 330 caggcatcgactgattggtctcgatcgatcttctctagtatattcgtggccgaactgcac 271
Query: 430 aaggttgccgcagcctccggtttgcccaatactgcactcacgaggctgagc 480
||||||| ||||||||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 270 aaggttgtcgcagcctccgttttgcccaatattgcagtcatgaggctgagc 220
Score = 174 bits (88), Expect = 4e-041
Identities = 123/134 (91%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||| ||
Sbjct: 138 aaatatgggcaca---catctgcaaaattacttcttcgacaacacactgatggggaactc 82
Query: 643 cacgtgctgacctcctagttgcaatccagaccacactcctccaacaggggaccatcatcc 702
||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 81 cacatgctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatcc 22
Query: 703 ttcgcaaggaaagg 716
||||||||||||||
Sbjct: 21 ttcgcaaggaaagg 8
Score = 69.9 bits (35), Expect = 2e-009
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 96 tgtgtcctagtaaaggagaaatgcaccaggacgaggagcaagggaaggaacgcac 150
||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 636 tgtgtcctagtaa-ggagaaatgcaccagaatgaggagcaagggaaggaatgcac 583
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 177 tctccccgtgtttctatctacagagg 152
>gb|BG103613.1|BG103613 RHIZ2_38_G01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 460
Score = 228 bits (115), Expect = 3e-057
Identities = 208/235 (88%), Gaps = 13/235 (5%)
Strand = Plus / Minus
Query: 250 gatgacaaacaacaactttgcagatgcagagcaattcatactcaaaacaactgtctgttc 309
||||| |||||||||||||||||||| |||||| |||||||||||| ||||| |||||||
Sbjct: 398 gatgataaacaacaactttgcagatgtagagcagttcatactcaaa-caactttctgttc 340
Query: 310 ggctcaccgattgaagtatccacccaccaaaactaataaagaatgctgaacaattgaact 369
|||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 339 ggctcaccgatt-aagtatccatcca---aaactaataaagaatgctgaacaattgaact 284
Query: 370 cggtcatcgattgattgattggtc----gcgatcttccctagtatattcgtggccgaact 425
| | ||||||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct: 283 caggcatcgattgat----tggtctcgatcgatcttctctagtatattcgtggccgaact 228
Query: 426 gcacaaggttgccgcagcctccggtttgcccaatactgcactcacgaggctgagc 480
||||||||||| ||||||||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 227 gcacaaggttgtcgcagcctccgctttgcccaatattgcagtcatgaggctgagc 173
Score = 99.6 bits (50), Expect = 2e-018
Identities = 79/88 (89%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||| ||
Sbjct: 92 aaatatgggcaca---catctgcaaaattacttcttcgagaacacactgatggggaactc 36
Query: 643 cacgtgctgacctcctagttgcaatcca 670
||| ||||||||||||||||||||||||
Sbjct: 35 cacatgctgacctcctagttgcaatcca 8
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 131 tctccccgtgtttctatctacagagg 106
>gb|BG947728.1|BG947728 IP1_8_D05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 709
Score = 228 bits (115), Expect = 3e-057
Identities = 208/235 (88%), Gaps = 13/235 (5%)
Strand = Plus / Minus
Query: 250 gatgacaaacaacaactttgcagatgcagagcaattcatactcaaaacaactgtctgttc 309
||||| |||||||||||||||||||| |||||| |||||||||||| ||||| |||||||
Sbjct: 393 gatgataaacaacaactttgcagatgtagagcagttcatactcaaa-caactttctgttc 335
Query: 310 ggctcaccgattgaagtatccacccaccaaaactaataaagaatgctgaacaattgaact 369
|||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 334 ggctcaccgatt-aagtatccatcca---aaactaataaagaatgctgaacaattgaact 279
Query: 370 cggtcatcgattgattgattggtc----gcgatcttccctagtatattcgtggccgaact 425
| | |||||||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct: 278 caggcatcgattga----ttggtctcgatcgatcttctctagtatattcgtggccgaact 223
Query: 426 gcacaaggttgccgcagcctccggtttgcccaatactgcactcacgaggctgagc 480
||||||||||| ||||||||||| ||||||||||| |||| ||| ||||||||||
Sbjct: 222 gcacaaggttgtcgcagcctccgttttgcccaatattgcagtcatgaggctgagc 168
Score = 107 bits (54), Expect = 8e-021
Identities = 80/88 (90%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 583 aaatatgggcacaaaacatctgcaaaaatacttcttcgaccacacactgacggggaagtc 642
||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||| ||
Sbjct: 86 aaatatgggcaca---catctgcaaaattacttcttcgacaacacactgatggggaactc 30
Query: 643 cacgtgctgacctcctagttgcaatcca 670
||| ||||||||||||||||||||||||
Sbjct: 29 cacatgctgacctcctagttgcaatcca 2
Score = 69.9 bits (35), Expect = 2e-009
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 96 tgtgtcctagtaaaggagaaatgcaccaggacgaggagcaagggaaggaacgcac 150
||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 584 tgtgtcctagtaa-ggagaaatgcaccagaatgaggagcaagggaaggaatgcac 531
Score = 44.1 bits (22), Expect = 0.097
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 537 tctccccttgtttctatctacagagg 562
||||||| ||||||||||||||||||
Sbjct: 125 tctccccgtgtttctatctacagagg 100
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,178,156
Number of Sequences: 832831
Number of extensions: 1178156
Number of successful extensions: 333424
Number of sequences better than 0.5: 274
Number of HSP's better than 0.5 without gapping: 271
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 332657
Number of HSP's gapped (non-prelim): 663
length of query: 3878
length of database: 491,359,669
effective HSP length: 21
effective length of query: 3857
effective length of database: 473,870,218
effective search space: 1827717430826
effective search space used: 1827717430826
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)