BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805363.2.1
(2856 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 1080 0.0
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 866 0.0
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 817 0.0
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 793 0.0
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 749 0.0
gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots ... 743 0.0
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 720 0.0
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 678 0.0
gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Me... 670 0.0
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 575 e-162
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 547 e-153
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 543 e-152
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 523 e-146
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 478 e-132
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 474 e-131
gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/c... 452 e-125
gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sor... 418 e-114
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 412 e-113
gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Me... 408 e-111
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 404 e-110
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 402 e-110
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 398 e-108
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 394 e-107
gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Me... 392 e-107
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 391 e-106
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 389 e-105
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 383 e-104
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 369 e-099
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 369 e-099
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 367 4e-099
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 367 4e-099
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 333 5e-089
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 329 8e-088
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 327 3e-087
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 315 1e-083
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 287 3e-075
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 285 1e-074
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 276 1e-071
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 248 2e-063
gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorg... 244 4e-062
gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorg... 244 4e-062
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 242 2e-061
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 236 9e-060
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 228 2e-057
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 220 6e-055
gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Me... 220 6e-055
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 220 6e-055
gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seed... 216 9e-054
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 212 1e-052
gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkal... 212 1e-052
gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Me... 210 5e-052
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 190 5e-046
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 190 5e-046
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 184 3e-044
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 182 1e-043
gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficie... 178 2e-042
gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle... 176 7e-042
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 172 1e-040
gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Me... 168 2e-039
gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorg... 155 3e-035
gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorg... 145 3e-032
gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG... 141 4e-031
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 139 2e-030
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 139 2e-030
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 139 2e-030
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 133 1e-028
gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/c... 131 4e-028
gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient se... 125 2e-026
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 123 1e-025
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 123 1e-025
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 115 2e-023
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 107 6e-021
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 107 6e-021
gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorg... 105 2e-020
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 103 9e-020
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 101 4e-019
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 101 4e-019
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 100 1e-018
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 100 1e-018
gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkal... 100 1e-018
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 98 5e-018
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 96 2e-017
gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2... 94 9e-017
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 94 9e-017
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 94 9e-017
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 92 3e-016
gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient see... 92 3e-016
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 92 3e-016
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 88 5e-015
gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorg... 88 5e-015
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 88 5e-015
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 88 5e-015
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 88 5e-015
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 88 5e-015
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 88 5e-015
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 88 5e-015
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 84 8e-014
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 84 8e-014
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 84 8e-014
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 84 8e-014
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 84 8e-014
gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Mer... 84 8e-014
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 84 8e-014
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 84 8e-014
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 84 8e-014
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 84 8e-014
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 82 3e-013
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 82 3e-013
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 80 1e-012
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 78 5e-012
gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (L... 78 5e-012
gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle ... 78 5e-012
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 78 5e-012
gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle... 78 5e-012
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 76 2e-011
gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkal... 76 2e-011
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 74 8e-011
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 72 3e-010
gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (L... 70 1e-009
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 70 1e-009
gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Me... 70 1e-009
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 70 1e-009
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 70 1e-009
gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient se... 70 1e-009
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 70 1e-009
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 68 5e-009
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 68 5e-009
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 66 2e-008
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 66 2e-008
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 66 2e-008
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 66 2e-008
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 64 8e-008
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 64 8e-008
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 64 8e-008
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 64 8e-008
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 62 3e-007
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 62 3e-007
gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots ... 62 3e-007
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 60 1e-006
gb|BG053525.1|BG053525 RHIZ2_10_C07.g1_A003 Rhizome2 (RHIZ2... 60 1e-006
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 60 1e-006
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 60 1e-006
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 60 1e-006
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 60 1e-006
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 60 1e-006
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 58 5e-006
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 58 5e-006
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 58 5e-006
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 56 2e-005
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 56 2e-005
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 56 2e-005
gb|CL161384.1|CL161384 104_352_10805682_116_31827_354 Sorgh... 54 7e-005
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 54 7e-005
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 54 7e-005
gb|CW420002.1|CW420002 fsbb001f126b21f0 Sorghum methylation... 54 7e-005
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 54 7e-005
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 54 7e-005
gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle... 54 7e-005
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 54 7e-005
gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Me... 52 3e-004
gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2... 50 0.001
gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient se... 50 0.001
gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Me... 48 0.005
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 46 0.018
gb|CW315000.1|CW315000 104_805_11472128_116_35818_018 Sorgh... 46 0.018
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 46 0.018
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 46 0.018
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 46 0.018
gb|BG947491.1|BG947491 IP1_5_A08.g1_A002 Immature pannicle ... 46 0.018
gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle... 46 0.018
gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle... 46 0.018
gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle... 46 0.018
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 46 0.018
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 46 0.018
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 44 0.071
gb|CW308239.1|CW308239 104_796_11468563_116_35730_070 Sorgh... 42 0.28
gb|CW308240.1|CW308240 104_796_11468563_148_35738_070 Sorgh... 42 0.28
gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (L... 42 0.28
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 42 0.28
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 42 0.28
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 42 0.28
gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2... 42 0.28
gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle... 42 0.28
gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-tr... 42 0.28
gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficien... 42 0.28
gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adap... 40 1.1
gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adap... 40 1.1
gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adap... 40 1.1
gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adap... 40 1.1
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 40 1.1
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 40 1.1
gb|CW022694.1|CW022694 104_162_10431999_1_30008 Sorghum met... 40 1.1
gb|CW256903.1|CW256903 104_722_11227052_116_35153_078 Sorgh... 40 1.1
gb|CW294740.1|CW294740 104_775_11415345_116_35774_035 Sorgh... 40 1.1
gb|CW294741.1|CW294741 104_775_11415345_148_35775_035 Sorgh... 40 1.1
gb|CW491902.1|CW491902 fsbb001f281p11k0 Sorghum methylation... 40 1.1
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 40 1.1
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 40 1.1
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 40 1.1
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 40 1.1
gb|BZ350747.1|BZ350747 ht60c02.g1 WGS-SbicolorF (JM107 adap... 38 4.4
gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorgh... 38 4.4
gb|CW512986.1|CW512986 115_3_10511127_1_30020 Sorghum unfil... 38 4.4
gb|CW513651.1|CW513651 115_5_10511837_1_30022 Sorghum unfil... 38 4.4
gb|CW022484.1|CW022484 104_161_10431871_1_30006 Sorghum met... 38 4.4
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 38 4.4
gb|CW080251.1|CW080251 104_408_10906137_116_32501_035 Sorgh... 38 4.4
gb|CW140861.1|CW140861 104_531_11136005_116_34924_021 Sorgh... 38 4.4
gb|CW140862.1|CW140862 104_531_11136005_148_34920_021 Sorgh... 38 4.4
gb|CW159001.1|CW159001 104_565_11149126_148_36405_095 Sorgh... 38 4.4
gb|CW195711.1|CW195711 104_619_11180783_116_36807_090 Sorgh... 38 4.4
gb|CW205182.1|CW205182 104_633_11186936_116_36928_024 Sorgh... 38 4.4
gb|CW205183.1|CW205183 104_633_11186936_148_36927_024 Sorgh... 38 4.4
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 38 4.4
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 38 4.4
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 38 4.4
gb|CW325732.1|CW325732 104_820_11477845_116_35929_051 Sorgh... 38 4.4
gb|CW325733.1|CW325733 104_820_11477845_148_35928_051 Sorgh... 38 4.4
gb|CW378646.1|CW378646 fsbb001f057i04k0 Sorghum methylation... 38 4.4
gb|CW391070.1|CW391070 fsbb001f077a13f0 Sorghum methylation... 38 4.4
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 38 4.4
gb|CW472069.1|CW472069 fsbb001f226l15k0 Sorghum methylation... 38 4.4
gb|CW493094.1|CW493094 fsbb001f283l05k0 Sorghum methylation... 38 4.4
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 38 4.4
gb|AW284365.1|AW284365 LG1_275_F04.g1_A002 Light Grown 1 (L... 38 4.4
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 38 4.4
gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle... 38 4.4
gb|CD427091.1|CD427091 SA1_17_F09.b1_A002 Salicylic acid-tr... 38 4.4
gb|CF071168.1|CF071168 FE1_15_B03.g1_A002 Iron-deficient se... 38 4.4
gb|CF771303.1|CF771303 DSBF1_17_C10.g1_A010 Drought-stresse... 38 4.4
>gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_53_B11_A007 5', mRNA sequence
Length = 652
Score = 1080 bits (545), Expect = 0.0
Identities = 627/654 (95%), Gaps = 9/654 (1%)
Strand = Plus / Minus
Query: 1356 aactaatgnacatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatg 1415
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 645 aactaatg-acatgtatagcttcctttagcagggaagctgggtttgttgaagggggtatg 587
Query: 1416 ccaccttgagtcataaaannaanggggtggatgcaataaaaattggagactggccaaagc 1475
||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 586 ccaccttgagtcataaa--------ggtggatgcaataaaaattggggactggccaaagc 535
Query: 1476 gtttctccaagctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatc 1535
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 534 gtttctccaagctcttctgggacatgagcagtgacctttcatcctcgtaaccttcaaatc 475
Query: 1536 cctcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcac 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cctcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcac 415
Query: 1596 ggtttttggaatcaatatagctcttgtccttcttttttcttccgccacagcaacttttaa 1655
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 414 ggtttttggaatcaatatagctcttgtccttcctttttctgccgccacagcaacttttaa 355
Query: 1656 tgataatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcct 1715
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 354 tgataatgataggctccaaatcagcttctgtcaatacaggatcataaccatacaaggcct 295
Query: 1716 gcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccct 1775
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 294 gcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctaaaccct 235
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 234 tcatattaatatcaaagaagacaatgttccggtttgcataacgatcatgtgagtctatgc 175
Query: 1836 catcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatca 1895
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 174 catcaaatctttgtggaaactgaacgtagcaagttttccttcctagtgctggatccatca 115
Query: 1896 tgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacat 1955
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 114 taaaacacatagcctctctaagagctttgctgctgttgaagtagtgatcacaatccacat 55
Query: 1956 taagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattca 2009
||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 54 taagaagataagcaccatttgtcaggacagctgatacgcgtatcaaagcattca 1
>gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 866 bits (437), Expect = 0.0
Identities = 511/538 (94%)
Strand = Plus / Minus
Query: 453 cagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggtgtgcg 512
|||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||
Sbjct: 538 cagcagcgagaatatggaagcaaggaggatggaccaaacgatgacgatggtcggtgtacg 479
Query: 513 gttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgc 572
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gttctgtttccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgc 419
Query: 573 aaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagcatacga 632
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 418 aaagaacagctttccgaagagtggaccccatgattggtagccactgttgatagcatatga 359
Query: 633 cactccagccactataccaaccaggttaatcacaagcacagtggtnnnnnnnatcagaag 692
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 358 tactccagccactataccaaccaggtttatcacaagcacagtggtcgggggaatcagaag 299
Query: 693 agttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttga 752
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acttgtccacttgaacacatatagctcagcaaaatcaccatcatcatcggttgcctttga 239
Query: 753 tgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagc 812
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 238 tgtgaccgtgaagtttgtgtcgatccctgccagcacttttaagagaccttggaacacagc 179
Query: 813 aaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctc 872
||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 178 aaagagatgcgcagaggtaccaccaatgacccaaaactgttcatttctccaccagtcctc 119
Query: 873 aatgccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagcaaaaag 932
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 118 aatgccaacaccactccatcgaagctccaaaataccagtggcgaagatggaagcaaaaag 59
Query: 933 caggatgaagaacgccccagcataattgctaatcgcaggaataataaatttgttggtg 990
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 58 caggatgaagaatgccccagcataattgctaatctcaggaataataaatttgttggtg 1
>gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 517
Score = 817 bits (412), Expect = 0.0
Identities = 494/519 (95%), Gaps = 13/519 (2%)
Strand = Plus / Minus
Query: 982 ttgttggtgagtaaacagatagcaggaaggacgcagtatgctactagtgggatagatgta 1041
|||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 517 ttgttggtgagtaaacagatagcaggaaggacacagtaggctattagtgggatagatgta 458
Query: 1042 attggataaacaatggtgttgatgtatgccagtctctccagaagctttagccttccattg 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 attggataaacaatggtgttgatgtatgccagtctctccagaagctttagccttccattg 398
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 338
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggc 1221
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 337 cgtagcacttggttgagacgatcagaaaggttaattggagcagaacccttgaagcaaggc 278
Query: 1222 cgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaa 1281
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 277 cgaagtggcatgcagtagatggatatccaaccccttgcatgcatcttgaaaccagttaaa 218
Query: 1282 atatcttcagtaacagagccatatatccatccgatctctttcccccattctgttttatcc 1341
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 217 atatcttcagtaacagatccatatatccatccgatctctttcccccattctgtcttgtcc 158
Query: 1342 tcatatnnccacnaaactaatgnacatgtatagcttcctttagcagggaacctgggtttg 1401
|||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 157 tcatat--ccac--aactaatg-acatgtatagcttcctttagcagggaagctgggtttg 103
Query: 1402 ttgaagggggtatgccaccttgagtcataaaannaanggggtggatgcaataaaaattgg 1461
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 102 ttgaagggggtatgccaccttgagtcataaa--------ggtggatgcaataaaaattgg 51
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacat 1500
|||||||||||||||||||||||||||||||| |||||
Sbjct: 50 ggactggccaaagcgtttctccaagctcttctgggacat 12
>gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 475
Score = 793 bits (400), Expect = 0.0
Identities = 448/465 (96%)
Strand = Plus / Minus
Query: 2119 gaatacttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|||||| ||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||
Sbjct: 475 gaatacctggatcattcctggatgatctcttgggttattcncaggccaaggagtgccatc 416
Query: 2179 agccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccg 2238
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 415 agccatggtccagccctcctcaggtattttttgcgcttttgctacaagggcattgatccg 356
Query: 2239 tactttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 355 tactttgaactcttcatactccctcttcatagctcgcctttctttcacaaaagaaggttg 296
Query: 2299 tattttgtcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttc 2358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 295 tattttgtcctttaggtaatctatcttttgagcaaagtaaaactctggagccctaggttc 236
Query: 2359 aatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatag 2418
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 235 aatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcagtttcagatag 176
Query: 2419 agcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaac 2478
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 175 cgcttcaaaagtcaacatagctgaaccgtcatcagaaacatagcatgatactttgtcaac 116
Query: 2479 agggtaatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttcctt 2538
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 115 agggtaatccacagcaagaatggacaggacagtgttggcagtaattagaggaggctcctt 56
Query: 2539 aagtggatccactgtactaacaaagacatcgattggagccaactg 2583
||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 55 gagtggatccactgtactgacaaagacatcaattggagccaactg 11
>gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_G09_A002 5', mRNA sequence
Length = 848
Score = 749 bits (378), Expect = 0.0
Identities = 718/832 (86%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
||||| |||||||||||||| || ||||| ||||||||||||| ||| || |||||||||
Sbjct: 842 ccatcgaatctttgtggaaattgtacataacaagttttccttcgtagagccggatccatc 783
Query: 1895 atgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccaca 1954
||||| ||||| || |||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 782 atgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccaca 723
Query: 1955 ttaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggca 2014
|| |||||||| |||||||| ||||| ||||| ||||| ||||||| |||||||| |||
Sbjct: 722 ttgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgca 663
Query: 2015 ccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaacaagccgt 2074
|||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct: 662 ccagccttcttgtgatgctggaagcctggtctcttttcacgagagacatagacaagacgc 603
Query: 2075 ggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttggatcatt 2134
|| || ||||| ||||| |||||||| ||||||||||| |||||||| || || |||||
Sbjct: 602 ggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaacacctgaatcatg 543
Query: 2135 ccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtccagccc 2194
|| ||||| || ||||| |||||||||||||| | ||| ||||||||||||||||| |||
Sbjct: 542 ccaggatggtccctaggattattcccaggccaagcagttccatcagccatggtccacccc 483
Query: 2195 tcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaactcttca 2254
|| ||||| | ||| || ||||| ||||||||||||| ||| | ||||||||| ||||||
Sbjct: 482 tcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaattcttca 423
Query: 2255 tactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttagg 2314
||||| |||||||| || || ||||| || ||||| |||||||| ||||||||||| |||
Sbjct: 422 tactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtccttcagg 363
Query: 2315 taatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttg 2374
|||||||| ||| ||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 362 taatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgcttctta 303
Query: 2375 caaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaac 2434
|||||||||||||| || || ||||| ||||||||||| || |||| ||||| |||| |
Sbjct: 302 caaaagggaacccactttctagcaaattctgcggtttctgagagagactcaaatgtcagc 243
Query: 2435 atagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagca 2494
||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 242 atagctgaaccatcatcagaaacatagcatgacactttgtcgacagggtaatccacagca 183
Query: 2495 agaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgta 2554
|||||||||| ||||||||| | || || || ||||||||||| | |||||||||||||
Sbjct: 182 agaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatggatccactgta 123
Query: 2555 ctaacaaagacatcgattggagccaactgggatggctcaccctccctatcatatctcaat 2614
|| || |||||||| || ||||||| ||| || ||||| ||||| |||||||| ||||||
Sbjct: 122 ctgacgaagacatcaatgggagccagctgtgacggctctccctctctatcatacctcaat 63
Query: 2615 gcaagtctatcgaggtaagtttcacggttgataggataccactttgggaact 2666
||||| || || || || || ||||||||||| |||||||| ||||||||||
Sbjct: 62 gcaagcctgtcaagatatgtctcacggttgattggataccattttgggaact 11
>gb|CX607839.1|CX607839 ANR1_31_C06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_31_C06_A002 3', mRNA sequence
Length = 841
Score = 743 bits (375), Expect = 0.0
Identities = 467/500 (93%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| |
Sbjct: 503 ttatccagcaggcagttcagatcaaatcagcagtttacaccgcactgcccccgggaaata 444
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 443 gctttctgagtaggtgatatgaagggatcgatcttcacccacagcagcgagaatatggaa 384
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 383 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 324
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 323 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctttccgaag 264
Query: 592 agtggaccccatgattggtagccactgttgatagcatacgacactccagccactatacca 651
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 263 agtggaccccatgattggtagccactgttgatagcatatgatactccagccactatacca 204
Query: 652 accaggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacaca 711
|||||||| ||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 203 accaggtttatcacaagcacagtggtcgggggaatcagaagacttgtccacttgaacaca 144
Query: 712 tacagctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtg 771
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tatagctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtg 84
Query: 772 tcgatccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtg 831
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 83 tcgatccctgccagcacttttaagagaccttggaacacagcaaagagatgcgcagaggta 24
Query: 832 ccaccaatgacccaaaactg 851
||||||||||||||||||||
Sbjct: 23 ccaccaatgacccaaaactg 4
Score = 125 bits (63), Expect = 2e-026
Identities = 165/195 (84%), Gaps = 3/195 (1%)
Strand = Plus / Minus
Query: 54 aatgtcaatgaccaaacagctcaatcagtacttgaagttccaacatacagattacaccac 113
||||||| | |||||||||| ||| ||||||||||| || ||||| |||| ||| |||
Sbjct: 799 aatgtcattaaccaaacagcaaaataggtacttgaagt-cctacatatagataacatcac 741
Query: 114 gacagtccagagcccacggtgaacaggtagtcacgacagtcaacatgaaacaggcactac 173
|||||||| |||||||||||| || ||||||||||| ||| | ||| ||| |||||
Sbjct: 740 aacagtccacagcccacggtgagcatatagtcacgacattcatgaagaagcagacactaa 681
Query: 174 ttactgctacttagctacaaataagtagcacgacataagttgacaaagtttcatgctgcc 233
|||||||||||||||||| |||||||| |||||||||||||||| |||||| | |||||
Sbjct: 680 ttactgctacttagctacgaataagtaacacgacataagttgac-aagttttgtactgcc 622
Query: 234 ca-ccccaaatgcag 247
|| ||||||||||||
Sbjct: 621 cacccccaaatgcag 607
>gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 491
Score = 720 bits (363), Expect = 0.0
Identities = 457/486 (94%), Gaps = 13/486 (2%)
Strand = Plus / Minus
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagtaggctattagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 425
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 424 ctctccagaagctttagccttccattgtaaccatacctgataggacagtgtctgctaact 365
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 364 agaatttcaactgaaccaagagcccagcgtagcacttggttgagacgatcagaaaggtta 305
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaaccc 245
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagatccatatatccatccg 185
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||||||||||||||| || |||| |||| |||| |||||||| ||||||||||
Sbjct: 184 atctctttcccccattctgtcttgtccttatat--ccac--aactaatg-acatgtatag 130
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||
Sbjct: 129 cttcctttagcagggaagctgggtttgttgaagggggtatgcccccttgagtcacaaa-- 72
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 71 ------ggtggatgcaataaaaattggggactggccaaagcgtttctccaagctcttctg 18
Query: 1495 agacat 1500
|||||
Sbjct: 17 ggacat 12
>gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 398
Score = 678 bits (342), Expect = 0.0
Identities = 378/390 (96%)
Strand = Plus / Minus
Query: 2284 cacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaaactc 2343
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 398 cacaaaagaaggttgtattttgtcctttaggtaatctatcttttgagcaaagtaaaactc 339
Query: 2344 tggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactc 2403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactc 279
Query: 2404 tgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataaca 2463
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 278 tgcagtttcagatagcgcttcaaaagtcaacatagctgaaccgtcatcagaaacatagca 219
Query: 2464 tgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccagtaat 2523
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 218 tgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttggcagtaat 159
Query: 2524 tagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagccaactg 2583
||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 158 tagaggaggctccttgagtggatccactgtactgacaaagacatcaattggagccaactg 99
Query: 2584 ggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcacggtt 2643
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 98 aggtggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcccggtt 39
Query: 2644 gataggataccactttgggaactgatctag 2673
||||||||||||||||||||||||||||||
Sbjct: 38 gataggataccactttgggaactgatctag 9
>gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 424
Score = 670 bits (338), Expect = 0.0
Identities = 387/403 (96%), Gaps = 9/403 (2%)
Strand = Plus / Minus
Query: 1356 aactaatgnacatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatg 1415
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 402 aactaatg-acatgtatagcttcctttagcagggaagctgggtttgttgaagggggtatg 344
Query: 1416 ccaccttgagtcataaaannaanggggtggatgcaataaaaattggagactggccaaagc 1475
||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 343 ccaccttgagtcataaa--------ggtggatgcaataaaaattggggactggccaaagc 292
Query: 1476 gtttctccaagctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatc 1535
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 291 gtttctccaagctcttctgggacatgagcagtgacctttcatcctcgtaaccttcaaatc 232
Query: 1536 cctcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcac 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cctcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcac 172
Query: 1596 ggtttttggaatcaatatagctcttgtccttcttttttcttccgccacagcaacttttaa 1655
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 171 ggtttttggaatcaatatagctcttgtccttcctttttctgccgccacagcaacttttaa 112
Query: 1656 tgataatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcct 1715
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 111 tgataatgttaggctccaaatcagcttctgtcaatacaggatcataaccatacaaggcct 52
Query: 1716 gcctattgaaacagcatcctgttcccacataaacaggtccttg 1758
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 gcctattgaaacagcatcctgttcccacataaacaggtccttg 9
>gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 5', mRNA sequence
Length = 669
Score = 575 bits (290), Expect = e-162
Identities = 569/663 (85%)
Strand = Plus / Minus
Query: 2032 ctggaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatc 2091
|||||||||||| |||||||||||||| ||||| ||||| || || || ||||| |||||
Sbjct: 669 ctggaagcctggtctcttttcacgagagacatagacaagacgcggtaattcatttccatc 610
Query: 2092 cgtgtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagg 2151
|||||||| ||||||||||| |||||||| || || ||||| || ||||| || |||||
Sbjct: 609 agtgtcaagaccaccactgtgccccaagaacacctgaatcatgccaggatggtccctagg 550
Query: 2152 gttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttg 2211
|||||| ||||||| | ||| ||||||||||||||||| ||||| ||||| | ||| ||
Sbjct: 549 attattcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctg 490
Query: 2212 cgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
||||| ||||||||||||| ||| | ||||||||| ||||||||||| |||||||| ||
Sbjct: 489 tgctttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgc 430
Query: 2272 ccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagc 2331
|| ||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| ||||
Sbjct: 429 tcgtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagc 370
Query: 2332 aaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccattt 2391
||||||||| |||||||| || |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 369 aaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactt 310
Query: 2392 ccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatc 2451
|| ||||| ||||||||||| || |||| ||||| |||| |||||||||||| |||||
Sbjct: 309 tctagcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatc 250
Query: 2452 agaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagt 2511
||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 249 agaaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagt 190
Query: 2512 gttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgat 2571
|||| | || || || ||||||||||| | ||||||||||||||| || |||||||| ||
Sbjct: 189 gttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaat 130
Query: 2572 tggagccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggta 2631
||||||| ||| || ||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 129 gggagccagctgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagata 70
Query: 2632 agtttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaa 2691
|| ||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 69 tgtctcacggttgattggataccattttgggaactgatcaagaagccaagacaaggcaaa 10
Query: 2692 cca 2694
|||
Sbjct: 9 cca 7
>gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 547 bits (276), Expect = e-153
Identities = 475/542 (87%)
Strand = Plus / Minus
Query: 1660 aatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcct 1719
||||||||| |||| ||||||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct: 550 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 491
Query: 1720 attgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttcat 1779
||||||||||||||||||||||||||| || || || ||||||||||||||||| |||||
Sbjct: 490 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 431
Query: 1780 attaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatc 1839
|| ||||||||||| || |||||||| || ||||||||||| |||| ||| || |||||
Sbjct: 430 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 371
Query: 1840 aaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaa 1899
|||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 370 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 311
Query: 1900 acacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaag 1959
||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 310 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 251
Query: 1960 aagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggcaccagc 2019
|||||| |||||||| ||||| ||||| ||||| ||||||| |||||||| ||||||||
Sbjct: 250 aagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagc 191
Query: 2020 cttcttgtggtgctggaagcctggcctcttttcacgagaaacataaacaagccgtggcaa 2079
||||||||| |||||||||||||| |||||||||||||| ||||| ||||| || || ||
Sbjct: 190 cttcttgtgatgctggaagcctggtctcttttcacgagagacatagacaagacgcggtaa 131
Query: 2080 ctcattcccatccgtgtcaagcccaccactgtggcccaagaatacttggatcattccngg 2139
||||| ||||| |||||||| ||||||||||| |||||||| || || ||||| || ||
Sbjct: 130 ttcatttccatcagtgtcaagaccaccactgtgccccaagaacacctgaatcatgccagg 71
Query: 2140 atgatctctagggttattcccaggccanggagtgccatcagccatggtccagccctcctc 2199
||| || ||||| |||||||||||||| | ||| ||||||||||||||||| ||||| ||
Sbjct: 70 atggtccctaggattattcccaggccaagcagttccatcagccatggtccacccctcttc 11
Query: 2200 ag 2201
||
Sbjct: 10 ag 9
>gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 543 bits (274), Expect = e-152
Identities = 517/599 (86%), Gaps = 8/599 (1%)
Strand = Plus / Minus
Query: 1401 gttgaagggggtatgccaccttgagtcataaaannaanggggtggatgcaataaaaattg 1460
|||||||| ||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 599 gttgaaggtggtatgccaccttgagtcataaa--------ggtggatgcaatgaaaattg 548
Query: 1461 gagactggccaaagcgtttctccaagctcttctgagacataagcagtgacctttcatcct 1520
||||||| ||||||||||||||||| || |||| |||||||||| ||||||||||||||
Sbjct: 547 gagactgaccaaagcgtttctccaatttcctctgggacataagcactgacctttcatcct 488
Query: 1521 cgtaaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctg 1580
| |||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 487 cataaccttcaataccctcttcgatgtcttccatgttgaagatgggagctgaagattctg 428
Query: 1581 ttctcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgc 1640
||||||||||| |||| ||| ||| ||||| || |||| ||| || || |||| |
Sbjct: 427 ttctcttcataatacggctttgactatccatataacttttgttctttttcttccttctac 368
Query: 1641 cacagcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcat 1700
||||||| || |||| | ||||||||| |||| ||||||||| ||||| ||||||||||
Sbjct: 367 cacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcat 308
Query: 1701 agccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaa 1760
| |||||||| ||||||||||||||||||||||||||||||||||| || || || ||||
Sbjct: 307 atccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaa 248
Query: 1761 tgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatatcgat 1820
||||||||||||| ||||| || ||||||||||| || |||||||| || ||||||||||
Sbjct: 247 tgccatctagacctttcatgttgatatcaaagaaaactatgttccgattagcatatcgat 188
Query: 1821 catgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttccttccta 1880
| |||| ||| || ||||| |||||||||||||| || ||||| ||||||||||||||||
Sbjct: 187 cgtgcatgtcaatgccatcgaatctttgtggaaattgtacataacaagttttccttccta 128
Query: 1881 gtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagt 1940
| || |||||||||||||| ||||| || |||||||||||||||||||| |||||||| |
Sbjct: 127 gagccggatccatcatgaagcacattgcttctctaagagctttgctgctgttgaagtaat 68
Query: 1941 gatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatc 1999
| |||||||||||||| |||||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 67 ggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacgaatc 9
>gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_28_B08_A012 5', mRNA sequence
Length = 512
Score = 523 bits (264), Expect = e-146
Identities = 292/302 (96%)
Strand = Plus / Minus
Query: 1999 caaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgaga 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgaga 243
Query: 2059 aacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaa 2118
||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 242 aacataaacaagccgtggcaactcatttccatcagtgtcaagcccaccactatggcccaa 183
Query: 2119 gaatacttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 182 gaatacctggatcattcctggatgatctcttgggttattcccaggccaaggagtgccatc 123
Query: 2179 agccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccg 2238
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 122 agccatggtccagccctcctcaggtattttttgcgcttttgctacaagggcattgatccg 63
Query: 2239 tactttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 tactttgaactcttcatactccctcttcatagctcgcctttctttcacaaaagaaggttg 3
Query: 2299 ta 2300
||
Sbjct: 2 ta 1
Score = 345 bits (174), Expect = 1e-092
Identities = 198/206 (96%)
Strand = Plus / Minus
Query: 1776 tcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatac 1835
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 512 tcatattaatatcaaagaagacaatgttccggtttgcataacgatcatgtgagtctatgc 453
Query: 1836 catcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatca 1895
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 452 catcaaatctttgtggaaactgaacgtagcaagttttccttcctagtgctggatccatca 393
Query: 1896 tgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacat 1955
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 392 taaaacacatagcctctctaagagctttgctgctgttgaagtagtgatcacaatccacat 333
Query: 1956 taagaagataagcaccattcgtcagg 1981
||||||||||||||||||| ||||||
Sbjct: 332 taagaagataagcaccatttgtcagg 307
>gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 478 bits (241), Expect = e-132
Identities = 471/548 (85%)
Strand = Plus / Minus
Query: 2162 ggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttgca 2221
||||| | ||| ||||||||||||||||| ||||| ||||| | ||| || ||||| |||
Sbjct: 556 ggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtgctttggca 497
Query: 2222 acaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgcctttct 2281
|||||||||| ||| | ||||||||| ||||||||||| |||||||| || || |||||
Sbjct: 496 acaagggcattgattcttactttgaattcttcatactctctcttcattgctcgtctttcc 437
Query: 2282 ttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaaac 2341
|| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||||||||
Sbjct: 436 ttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaat 377
Query: 2342 tctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaac 2401
|||||||| || |||||||| ||||| ||||| |||||||||||||| || || |||||
Sbjct: 376 tctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaat 317
Query: 2402 tctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataa 2461
||||||||||| || |||| ||||| |||| |||||||||||| ||||||||||||||
Sbjct: 316 tctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcagaaacatag 257
Query: 2462 catgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccagta 2521
||||| |||||||| |||||||||||||||||||||||||||| ||||||||| | ||
Sbjct: 256 catgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgttggccgtg 197
Query: 2522 attagaggaggttccttaagtggatccactgtactaacaaagacatcgattggagccaac 2581
|| || ||||||||||| | ||||||||||||||| || |||||||| || ||||||| |
Sbjct: 196 atcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagc 137
Query: 2582 tgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcacgg 2641
|| || ||||| ||||| |||||||| ||||||||||| || || || || || ||||||
Sbjct: 136 tgtgacggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacgg 77
Query: 2642 ttgataggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttca 2701
||||| |||||||| |||||||||||||| |||||||||||||| |||||||| || |||
Sbjct: 76 ttgattggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacctca 17
Query: 2702 caaataac 2709
|| |||||
Sbjct: 16 cagataac 9
>gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 474 bits (239), Expect = e-131
Identities = 469/547 (85%), Gaps = 8/547 (1%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||||| |
Sbjct: 543 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccacctgna 484
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 483 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 432
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatccctcttcta 1544
| || |||| |||||||||| ||||||||||||||| |||||||||| |||||||| |
Sbjct: 431 atttcctctgggacataagcactgacctttcatcctcataaccttcaataccctcttcga 372
Query: 1545 tatcttccatgttgaagatgggagccgaagattctgttctcttcatatcacggtttttgg 1604
| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||
Sbjct: 371 tgtcttccatgttgaagatgggagctgaagattctgttctcttcataatacggctttgac 312
Query: 1605 aatcaatatagctcttgtccttcttttttcttccgccacagcaacttttaatgataatgt 1664
||| ||||| || |||| ||| || || |||| |||||||| || |||| | |||||
Sbjct: 311 tatccatataacttttgttctttttcttccttctaccacagcagctcttaacaacaatgt 252
Query: 1665 taggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcctattga 1724
|||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 251 taggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattga 192
Query: 1725 aacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaa 1784
|||||||||||||||||||||| || || || ||||||||||||||||| ||||| || |
Sbjct: 191 aacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcatgttga 132
Query: 1785 tatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatc 1844
|||||||||| || |||||||| || ||||||||||| |||| ||| || ||||| ||||
Sbjct: 131 tatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatc 72
Query: 1845 tttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacaca 1904
|||||||||| || ||||| ||||||||||||||||| || |||||||||||||| ||||
Sbjct: 71 tttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaagcaca 12
Query: 1905 tagcctc 1911
| |||||
Sbjct: 11 ttgcctc 5
>gb|CD227828.1|CD227828 CCC1_56_G02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_56_G02_A007 3', mRNA sequence
Length = 652
Score = 452 bits (228), Expect = e-125
Identities = 288/308 (93%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| |
Sbjct: 311 ttatccagcaggcagttcagatcaaatcagcagtttacaccgcactgcccccgggaaata 252
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 251 gctttctgagtaggtgatatgaagggatcgatcttcacccacagcagcgagaatatggaa 192
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 191 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 132
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 131 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctttccgaag 72
Query: 592 agtggaccccatgattggtagccactgttgatagcatacgacactccagccactatacca 651
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 71 agtggaccccatgattggtagccactgttgatagcatatgatactccagccactatacca 12
Query: 652 accaggtt 659
||||||||
Sbjct: 11 accaggtt 4
Score = 125 bits (63), Expect = 2e-026
Identities = 165/195 (84%), Gaps = 3/195 (1%)
Strand = Plus / Minus
Query: 54 aatgtcaatgaccaaacagctcaatcagtacttgaagttccaacatacagattacaccac 113
||||||| | |||||||||| ||| ||||||||||| || ||||| |||| || |||
Sbjct: 607 aatgtcattaaccaaacagcaaaataggtacttgaagt-cctacatatagataacgtcac 549
Query: 114 gacagtccagagcccacggtgaacaggtagtcacgacagtcaacatgaaacaggcactac 173
|||||||| |||||||||||| || ||||||||||| ||| | ||||||| |||||
Sbjct: 548 aacagtccacagcccacggtgagcatatagtcacgacattcatgaagaaacagacactaa 489
Query: 174 ttactgctacttagctacaaataagtagcacgacataagttgacaaagtttcatgctgcc 233
|||||||||||||||||| |||||||| |||||||||||||||| |||||| | |||||
Sbjct: 488 ttactgctacttagctacgaataagtaacacgacataagttgac-aagttttgtactgcc 430
Query: 234 ca-ccccaaatgcag 247
|| ||||||||||||
Sbjct: 429 cacccccaaatgcag 415
>gb|BG239994.1|BG239994 OV1_31_F08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 418 bits (211), Expect = e-114
Identities = 271/291 (93%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| |
Sbjct: 291 ttatccagcaggcagttcagatcaaatcagcagtttacaccgcactgcccccgggaaata 232
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 231 gctttctgagtaggtgatatgaagggatcgatcttcacccacagcagcgagaatatggaa 172
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 171 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 112
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 111 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctttccgaag 52
Query: 592 agtggaccccatgattggtagccactgttgatagcatacgacactccagcc 642
|||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 51 agtggaccccatgattggtagccactgttgatagcatatgatactccagcc 1
Score = 121 bits (61), Expect = 4e-025
Identities = 132/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 96 acatacagattacaccacgacagtccagagcccacggtgaacaggtagtcacgacagtca 155
||||| |||| ||| ||| |||||||| |||||||||||| || ||||||||||| |||
Sbjct: 546 acatatagataacatcacaacagtccacagcccacggtgagcatatagtcacgacattca 487
Query: 156 acatgaaacaggcactacttactgctacttagctacaaataagtagcacgacataagttg 215
| ||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 486 tgaagaaacagacactaattactgctacttagctacgaataagtaacacgacataagttg 427
Query: 216 acaaagtttcatgctgccca-ccccaaatgcag 247
|| |||||| | ||||||| ||||||||||||
Sbjct: 426 ac-aagttttgtactgcccacccccaaatgcag 395
>gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 412 bits (208), Expect = e-113
Identities = 401/466 (86%)
Strand = Plus / Minus
Query: 2154 tattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcg 2213
||||| ||||||| | ||| ||||||||||||||||| ||||| ||||| | ||| || |
Sbjct: 494 tattcncaggccaagcagttccatcagccatggtccacccctcttcaggcactttctgtg 435
Query: 2214 cttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagccc 2273
|||| ||||||||||||| ||| | ||||||||| ||||||||||| |||||||| || |
Sbjct: 434 ctttggcaacaagggcattgattcttactttgaattcttcatactctctcttcattgctc 375
Query: 2274 gcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaa 2333
| ||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| ||||||
Sbjct: 374 gtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttgagcaa 315
Query: 2334 agtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcc 2393
||||||| |||||||| || |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 314 agtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccactttc 255
Query: 2394 ttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcag 2453
| ||||| ||||||||||| || |||| ||||| |||| |||||||||||| |||||||
Sbjct: 254 tagcaaattctgcggtttctgagagagactcaaatgtcagcatagctgaaccatcatcag 195
Query: 2454 aaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgt 2513
||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 194 aaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaaacagtgt 135
Query: 2514 tgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattg 2573
|| | || || || ||||||||||| | ||||||||||||||| || |||||||| || |
Sbjct: 134 tggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagacatcaatgg 75
Query: 2574 gagccaactgggatggctcaccctccctatcatatctcaatgcaag 2619
|||||| ||| || ||||| ||||| |||||||| |||||||||||
Sbjct: 74 gagccagctgtgacggctctccctctctatcatacctcaatgcaag 29
>gb|BF585666.1|BF585666 FM1_24_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 579
Score = 408 bits (206), Expect = e-111
Identities = 275/298 (92%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||||| |
Sbjct: 298 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaata 239
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 238 gctttctgagtaggtgatatgaagggatcaatcttcacccacagcagtgagaatatggaa 179
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 178 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 119
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 118 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctttccgaag 59
Query: 592 agtggaccccatgattggtagccactgttgatagcatacgacactccagccactatac 649
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 58 agtggaccccatgattggtagccactgttgatagcatatgatactccagccactatac 1
Score = 135 bits (68), Expect = 3e-029
Identities = 146/168 (86%), Gaps = 3/168 (1%)
Strand = Plus / Minus
Query: 81 gtacttgaagttccaacatacagattacaccacgacagtccagagcccacggtgaacagg 140
||||||||||| || ||||| |||| ||| ||| |||||||| ||||||||||||||| |
Sbjct: 567 gtacttgaagt-cctacatatagataacatcacaacagtccacagcccacggtgaacatg 509
Query: 141 tagtcacgacagtcaacatgaaacaggcactacttactgctacttagctacaaataagta 200
||||||||||| ||| | ||||||| ||||| ||||||||||||| |||| ||||||||
Sbjct: 508 tagtcacgacattcaggaagaaacagacactaattactgctacttatctacgaataagta 449
Query: 201 gcacgacataagttgacaaagtttcatgctgccca-ccccaaatgcag 247
|||||||||||||||| |||||| | ||||||| ||||||||||||
Sbjct: 448 acacgacataagttgac-aagttttgtactgcccacccccaaatgcag 402
>gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 610
Score = 404 bits (204), Expect = e-110
Identities = 496/596 (83%)
Strand = Plus / Minus
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggttaatcacaagcacagtg 675
|||||||| |||||||| | || ||||| || || ||||||||||| ||||| ||||||
Sbjct: 604 ctgttgatggcatacgaaattcntgccaccattccgaccaggttaatgacaagaacagtg 545
Query: 676 gtnnnnnnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatca 735
|| || || | | | ||||||||||||||||| ||||||||||| || |||||
Sbjct: 544 gtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcc 485
Query: 736 tcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaag 795
||||| | ||||||||| || || |||||||| || || ||||| || | |||||| |
Sbjct: 484 tcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagc 425
Query: 796 agaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctca 855
||||| |||||||| || |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 424 agaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctca 365
Query: 856 tttctccaccaatcctcaatgccaacaccactccatcgaagctccaaaataccagtggcg 915
|||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 364 tttctccaccaatcttcaatgccaacaccactccatctgagttccaatataccagtggca 305
Query: 916 aagatagaagcaaaaagcaggatgaagaacgccccagcataattgctaatcgcaggaata 975
|| || || || ||||| || ||||||||| ||||||||| || |||||| |||||||
Sbjct: 304 aaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatg 245
Query: 976 ataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctactagtgggata 1035
|||||||| ||||| || | ||||||||||||||| || || || || | || || ||
Sbjct: 244 ataaatttattggtaaggagacagatagcaggaagaacacaataggcaataagcggaatg 185
Query: 1036 gatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagctttagcctt 1095
||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| || |
Sbjct: 184 gatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcgg 125
Query: 1096 ccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaaga 1155
|||||||||||||||||||||||||| |||||||| || | |||||| ||||| ||||||
Sbjct: 124 ccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgacccaaga 65
Query: 1156 gcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaaccctt 1211
||||| || | ||| || || ||||||||||| ||||| ||||| |||||||||||
Sbjct: 64 gcccaacggagcacctgattaagacgatcagagagattgattggtgcagaaccctt 9
>gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 598
Score = 402 bits (203), Expect = e-110
Identities = 437/515 (84%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttgatgtg 756
||||||||||||||||| ||||||||||| || ||||| ||||| | ||||||||| ||
Sbjct: 523 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 464
Query: 757 accgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaag 816
|| |||||||| || || ||||| || | |||||| | ||||| |||||||| || |||
Sbjct: 463 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 404
Query: 817 agatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaatg 876
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 403 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 344
Query: 877 ccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagcaaaaagcagg 936
|||||||||||||||| || ||||| ||||||||||| || || || || ||||| ||
Sbjct: 343 ccaacaccactccatctgagttccaatataccagtggcaaaaatggaggcgaaaagaaga 284
Query: 937 atgaagaacgccccagcataattgctaatcgcaggaataataaatttgttggtgagtaaa 996
||||||||| ||||||||| || |||||| ||||||| |||||||| ||||| || | |
Sbjct: 283 atgaagaacatcccagcatagttactaatctcaggaatgataaatttattggtaaggaga 224
Query: 997 cagatagcaggaaggacgcagtatgctactagtgggatagatgtaattggataaacaatg 1056
|||||||||||||| || || || || | || || || ||||| |||||||||||||||
Sbjct: 223 cagatagcaggaagaacacaataggcaataagcggaatggatgtgattggataaacaatg 164
Query: 1057 gtgttgatgtatgccagtctctccagaagctttagccttccattgtaaccataccagata 1116
||||||||||| ||||| ||||||| |||||| || | |||||||||||||||||||||
Sbjct: 163 gtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccagata 104
Query: 1117 ggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggttg 1176
||||| |||||||| || | |||||| ||||| ||||||||||| || | ||| || ||
Sbjct: 103 ggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagcacctgatta 44
Query: 1177 agacgatcagaaagattaattggagcagaaccctt 1211
||||||||||| ||||| ||||| |||||||||||
Sbjct: 43 agacgatcagagagattgattggtgcagaaccctt 9
>gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 403
Score = 398 bits (201), Expect = e-108
Identities = 327/369 (88%)
Strand = Plus / Minus
Query: 1660 aatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcct 1719
||||||||| |||| ||||||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct: 379 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 320
Query: 1720 attgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttcat 1779
||||||||||||||||||||||||||| || || || ||||||||||||||||| |||||
Sbjct: 319 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 260
Query: 1780 attaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatc 1839
|| ||||||||||| || |||||||| || ||||||||||| |||| ||| || |||||
Sbjct: 259 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 200
Query: 1840 aaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaa 1899
|||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 199 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 140
Query: 1900 acacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaag 1959
||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 139 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 80
Query: 1960 aagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggcaccagc 2019
|||||| |||||||| ||||| ||||| ||||| ||||||| |||||||| ||||||||
Sbjct: 79 aagataggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagc 20
Query: 2020 cttcttgtg 2028
|||||||||
Sbjct: 19 cttcttgtg 11
>gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f068m13, DNA
sequence
Length = 659
Score = 394 bits (199), Expect = e-107
Identities = 462/552 (83%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 567 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 508
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 507 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 448
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 447 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 388
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 387 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 328
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
|||||||| ||||| |||||||| || || | | | |||||||||||||||||
Sbjct: 327 aggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttgaacacatat 268
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| || ||||| ||||| | ||||||||| || || |||||||| || ||
Sbjct: 267 agctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatca 208
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
||||| || | |||||| | ||||| |||||||| || |||||||| ||||||||||||
Sbjct: 207 atcccagccaacactttcagcagaccctggaacaccgcgaagagatgggcagaggtgcca 148
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 147 ccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccatctg 88
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
|| ||||| ||||||||||| || || || || ||||| || ||||||||| |||||||
Sbjct: 87 agttccaatataccagtggcaaaaatggaggcgaaaagaagaatgaagaacatcccagca 28
Query: 955 taattgctaatc 966
|| || ||||||
Sbjct: 27 tagttactaatc 16
>gb|BF655935.1|BF655935 FM1_42_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 625
Score = 392 bits (198), Expect = e-107
Identities = 278/305 (91%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||||| |
Sbjct: 305 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaata 246
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 245 gctttctgagtaggtgatatgaagggatcaatcttcacccacagcagtgagaatatggaa 186
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| | ||||||||||||||| |||||||| ||||||||||||
Sbjct: 185 gcaaggaggatggaccaaacgaagacgatggtcggtgtacggttctgtttccccatgaga 126
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 125 ccctagaggaaagggtagaggtggaggatcacccanattgcaaagaacagctttccgaag 66
Query: 592 agtggaccccatgattggtagccactgttgatagcatacgacactccagccactatacca 651
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 65 agtggaccccatgattggtagccactgttgatagcatatgatactccagccactatacca 6
Query: 652 accag 656
|||||
Sbjct: 5 accag 1
Score = 135 bits (68), Expect = 3e-029
Identities = 146/168 (86%), Gaps = 3/168 (1%)
Strand = Plus / Minus
Query: 81 gtacttgaagttccaacatacagattacaccacgacagtccagagcccacggtgaacagg 140
||||||||||| || ||||| |||| ||| ||| |||||||| ||||||||||||||| |
Sbjct: 574 gtacttgaagt-cctacatatagataacatcacaacagtccacagcccacggtgaacatg 516
Query: 141 tagtcacgacagtcaacatgaaacaggcactacttactgctacttagctacaaataagta 200
||||||||||| ||| | ||||||| ||||| ||||||||||||| |||| ||||||||
Sbjct: 515 tagtcacgacattcaggaagaaacagacactaattactgctacttatctacgaataagta 456
Query: 201 gcacgacataagttgacaaagtttcatgctgccca-ccccaaatgcag 247
|||||||||||||||| |||||| | ||||||| ||||||||||||
Sbjct: 455 acacgacataagttgac-aagttttgtactgcccacccccaaatgcag 409
>gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 391 bits (197), Expect = e-106
Identities = 478/574 (83%)
Strand = Plus / Minus
Query: 574 aagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagcatacgac 633
||||||||||| || || || |||||||| |||||||| || |||||||| ||||||||
Sbjct: 582 aagaacagctttccaaagagcggaccccaggattggtaaccgctgttgatggcatacgaa 523
Query: 634 actccagccactataccaaccaggttaatcacaagcacagtggtnnnnnnnatcagaaga 693
| ||| ||||| || || ||||||||||| ||||| |||||||| || || | |
Sbjct: 522 attcctgccaccattccgaccaggttaatgacaagaacagtggtcggaggaatgagcaaa 463
Query: 694 gttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttgat 753
| ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||||
Sbjct: 462 ctggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgag 403
Query: 754 gtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagca 813
|| || |||||||| || || ||||| || | |||||| | ||||| |||||||| ||
Sbjct: 402 gtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcg 343
Query: 814 aagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctca 873
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 342 aagagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttca 283
Query: 874 atgccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagcaaaaagc 933
||||||||||||||||||| || ||||| ||||||||||| || || || || |||||
Sbjct: 282 atgccaacaccactccatctgagttccaatataccagtggcaaaaatggaggcgaaaaga 223
Query: 934 aggatgaagaacgccccagcataattgctaatcgcaggaataataaatttgttggtgagt 993
|| ||||||||| ||||||||| || |||||| ||||||| |||||||| ||||| ||
Sbjct: 222 agaatgaagaacatcccagcatagttactaatctcaggaatgataaatttattggtaagg 163
Query: 994 aaacagatagcaggaaggacgcagtatgctactagtgggatagatgtaattggataaaca 1053
| ||||||||||||||| || || || || | || || || ||||| ||||||||||||
Sbjct: 162 agacagatagcaggaagaacacaataggcaataagcggaatggatgtgattggataaaca 103
Query: 1054 atggtgttgatgtatgccagtctctccagaagctttagccttccattgtaaccataccag 1113
|||||||||||||| ||||| ||||||| |||||| || | ||||||||||||||||||
Sbjct: 102 atggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccag 43
Query: 1114 ataggacagtgtctgctaagtagaatttcaactg 1147
|||||||| |||||||| || | |||||| ||||
Sbjct: 42 ataggacaatgtctgctgagcaaaatttccactg 9
>gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 3', mRNA sequence
Length = 768
Score = 389 bits (196), Expect = e-105
Identities = 388/452 (85%)
Strand = Plus / Minus
Query: 2377 aaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacat 2436
|||||||||||| || || ||||| ||||||||||| || |||| ||||| |||| |||
Sbjct: 733 aaagggaacccactttctagcaaattctgcggtttctgagagagactcaaatgtcagcat 674
Query: 2437 agctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaag 2496
||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 673 agctgaaccatcatcagaaacatagcatgacactttgtcgacagggtaatccacagcaag 614
Query: 2497 aatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgtact 2556
|||||||| ||||||||| | || || || ||||||||||| | |||||||||||||||
Sbjct: 613 aatggacaaaacagtgttggccgtgatcagtggaggttccttcaatggatccactgtact 554
Query: 2557 aacaaagacatcgattggagccaactgggatggctcaccctccctatcatatctcaatgc 2616
|| |||||||| || ||||||| ||| || ||||| ||||| |||||||| ||||||||
Sbjct: 553 gacgaagacatcaatgggagccagctgtgacggctctccctctctatcatacctcaatgc 494
Query: 2617 aagtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaag 2676
||| || || || || || ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 493 aagcctgtcaagatatgtctcacggttgattggataccattttgggaactgatcaagaag 434
Query: 2677 ccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaacccataagcatc 2736
||||||||| |||||||| || ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 433 ccaagacaaggcaaaccagacctcacagataacagatactagccacaatccataagcatt 374
Query: 2737 ttccactggatgagttatacgatattgaaagaagaaacataggatgataagccggagaac 2796
| |||||||||| | | ||||||||| |||||||| || ||||||||||| |||||||
Sbjct: 373 attcactggatgactgacacgatattggaagaagaagcacaggatgataagacggagaat 314
Query: 2797 aatcacgatccgataaaggttaagctcgtttg 2828
||||| ||||| |||||||| |||| |||||
Sbjct: 313 gatcactatccggtaaaggttgagctggtttg 282
>gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 591
Score = 383 bits (193), Expect = e-104
Identities = 453/542 (83%)
Strand = Plus / Minus
Query: 425 gggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacgg 484
|||| ||||| || ||||||||||||||||||| ||||| |||| || || |||| ||
Sbjct: 591 gggagatgaaaggatcgatcttcacccacagcaaggagaagatggtcgcgaggaggatgg 532
Query: 485 accaaacaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaag 544
|||| ||||||||||| || ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 531 accagacaatgacgattgttggtgtgcggttctgcctgcccatgagacccttcaggaagg 472
Query: 545 ggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatg 604
|||| || ||||||||||||||||| | ||||||||||| || || || |||||||| |
Sbjct: 471 ggtacagatggaggatcacccagatcgagaagaacagctttccaaagagcggaccccagg 412
Query: 605 attggtagccactgttgatagcatacgacactccagccactataccaaccaggttaatca 664
||||||| || |||||||| |||||||| | ||| ||||| || || ||||||||||| |
Sbjct: 411 attggtaaccgctgttgatggcatacgaaattcctgccaccattccgaccaggttaatga 352
Query: 665 caagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatacagctcagcaa 724
|||| |||||||| || || | | | ||||||||||||||||| ||||||||||
Sbjct: 351 caagaacagtggtcggaggaatgagcaaactggtccacttgaacacatatagctcagcaa 292
Query: 725 aatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgcta 784
| || ||||| ||||| | ||||||||| || || |||||||| || || ||||| || |
Sbjct: 291 agtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagcca 232
Query: 785 gcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgaccc 844
|||||| | ||||| |||||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 231 acactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataaccc 172
Query: 845 aaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctccaaaa 904
||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |
Sbjct: 171 aaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagttccaata 112
Query: 905 taccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagcataattgctaa 964
|||||||||| || || || || ||||| || ||||||||| ||||||||| || ||||
Sbjct: 111 taccagtggcaaaaatggaggcgaaaagaagaatgaagaacatcccagcatagttactaa 52
Query: 965 tc 966
||
Sbjct: 51 tc 50
>gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10593130, DNA
sequence
Length = 638
Score = 369 bits (186), Expect = e-099
Identities = 416/495 (84%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 144 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 203
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 204 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 263
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 264 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 323
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 324 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 383
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
|||||||| ||||| |||||||| || || | | | |||||||||||||||||
Sbjct: 384 aggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttgaacacatat 443
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| || ||||| ||||| | ||||||||| || || |||||||| || ||
Sbjct: 444 agctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatca 503
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
||||| || | |||||| | ||||| |||||||| || |||||||| ||||||||||||
Sbjct: 504 atcccagccaacactttcagcagaccctggaacaccgcgaagagatgggcagaggtgcca 563
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 564 ccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccatctg 623
Query: 895 agctccaaaatacca 909
|| ||||| ||||||
Sbjct: 624 agttccaatatacca 638
>gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 418
Score = 369 bits (186), Expect = e-099
Identities = 357/414 (86%)
Strand = Plus / Minus
Query: 1498 cataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccatgtt 1557
|||||||| ||||||||||||||| |||||||||| |||||||| || |||||||||||
Sbjct: 418 cataagcactgacctttcatcctcataaccttcaataccctcttcgatgtcttccatgtt 359
Query: 1558 gaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatatagct 1617
|||||||||||| ||||||||||||||||||||| |||| ||| ||| ||||| ||
Sbjct: 358 gaagatgggagctgaagattctgttctcttcataatacggctttgactatccatataact 299
Query: 1618 cttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaaatc 1677
|||| ||| || || |||| |||||||| || |||| | ||||||||| |||| |||
Sbjct: 298 tttgttctttttcttccttctaccacagcagctcttaacaacaatgttaggttccagatc 239
Query: 1678 agcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcctgt 1737
|||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 238 agcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaacagcatcctgt 179
Query: 1738 tcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagac 1797
||||||||| || || || ||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 178 tcccacatagactggaccctgaatgccatctagacctttcatgttgatatcaaagaaaac 119
Query: 1798 aatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactg 1857
|||||||| || ||||||||||| |||| ||| || ||||| |||||||||||||| ||
Sbjct: 118 tatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttgtggaaattg 59
Query: 1858 aacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctc 1911
||||| ||||||||||||||||| || |||||||||||||| ||||| |||||
Sbjct: 58 tacataacaagttttccttcctagagccggatccatcatgaagcacattgcctc 5
>gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 351
Score = 367 bits (185), Expect = 4e-099
Identities = 302/341 (88%)
Strand = Plus / Minus
Query: 1660 aatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcct 1719
||||||||| |||| ||||||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct: 350 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 291
Query: 1720 attgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttcat 1779
||||||||||||||||||||||||||| || || || ||||||||||||||||| |||||
Sbjct: 290 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 231
Query: 1780 attaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatc 1839
|| ||||||||||| || |||||||| || ||||||||||| |||| ||| || |||||
Sbjct: 230 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 171
Query: 1840 aaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaa 1899
|||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 170 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 111
Query: 1900 acacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaag 1959
||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 110 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 51
Query: 1960 aagataagcaccattcgtcaggacagctgatacgcgaatca 2000
|||||| |||||||| ||||| ||||| ||||| |||||||
Sbjct: 50 aagataggcaccatttgtcagcacagcagatacacgaatca 10
>gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 374
Score = 367 bits (185), Expect = 4e-099
Identities = 302/341 (88%)
Strand = Plus / Minus
Query: 1660 aatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcct 1719
||||||||| |||| ||||||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct: 350 aatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcct 291
Query: 1720 attgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttcat 1779
||||||||||||||||||||||||||| || || || ||||||||||||||||| |||||
Sbjct: 290 attgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacctttcat 231
Query: 1780 attaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatc 1839
|| ||||||||||| || |||||||| || ||||||||||| |||| ||| || |||||
Sbjct: 230 gttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatc 171
Query: 1840 aaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaa 1899
|||||||||||||| || ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 170 gaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatcatgaa 111
Query: 1900 acacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaag 1959
||||| || |||||||||||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 110 gcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccacattgag 51
Query: 1960 aagataagcaccattcgtcaggacagctgatacgcgaatca 2000
|||||| |||||||| ||||| ||||| ||||| |||||||
Sbjct: 50 aagataggcaccatttgtcagcacagcagatacacgaatca 10
>gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 420
Score = 333 bits (168), Expect = 5e-089
Identities = 339/396 (85%)
Strand = Plus / Minus
Query: 816 gagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaat 875
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 420 gagatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaat 361
Query: 876 gccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagcaaaaagcag 935
||||||||||||||||| || ||||| ||||||||||| || || || || ||||| ||
Sbjct: 360 gccaacaccactccatctgagttccaatataccagtggcaaaaatggaggcgaaaagaag 301
Query: 936 gatgaagaacgccccagcataattgctaatcgcaggaataataaatttgttggtgagtaa 995
||||||||| ||||||||| || |||||| ||||||| |||||||| ||||| || |
Sbjct: 300 aatgaagaacatcccagcatagttactaatctcaggaatgataaatttattggtaaggag 241
Query: 996 acagatagcaggaaggacgcagtatgctactagtgggatagatgtaattggataaacaat 1055
||||||||||||||| || || || || | || || || ||||| ||||||||||||||
Sbjct: 240 acagatagcaggaagaacacaataggcaataagcggaatggatgtgattggataaacaat 181
Query: 1056 ggtgttgatgtatgccagtctctccagaagctttagccttccattgtaaccataccagat 1115
|||||||||||| ||||| ||||||| |||||| || | ||||||||||||||||||||
Sbjct: 180 ggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccagat 121
Query: 1116 aggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggtt 1175
|||||| |||||||| || | |||||| ||||| ||||||||||| || | ||| || ||
Sbjct: 120 aggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagcacctgatt 61
Query: 1176 gagacgatcagaaagattaattggagcagaaccctt 1211
||||||||||| ||||| ||||| |||||||||||
Sbjct: 60 aagacgatcagagagattgattggtgcagaaccctt 25
>gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_28_F11_A002 5', mRNA sequence
Length = 452
Score = 329 bits (166), Expect = 8e-088
Identities = 379/450 (84%)
Strand = Plus / Minus
Query: 744 tgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttg 803
||||||||| || || |||||||| || || ||||| || | |||||| | ||||| ||
Sbjct: 452 tgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctg 393
Query: 804 gaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctcca 863
|||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 392 gaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctcca 333
Query: 864 ccaatcctcaatgccaacaccactccatcgaagctccaaaataccagtggcgaagataga 923
|||||| ||||||||||||||||||||| || ||||| ||||||||||| || || ||
Sbjct: 332 ccaatcttcaatgccaacaccactccatttgagttccaatataccagtggcaaaaatgga 273
Query: 924 agcaaaaagcaggatgaagaacgccccagcataattgctaatcgcaggaataataaattt 983
|| ||||| || ||||||||| ||||||||| || |||||| ||||||| ||||||||
Sbjct: 272 ggcgaaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaattt 213
Query: 984 gttggtgagtaaacagatagcaggaaggacgcagtatgctactagtgggatagatgtaat 1043
||||| || | ||||||||||||||| || || || || | || || || ||||| ||
Sbjct: 212 attggtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgat 153
Query: 1044 tggataaacaatggtgttgatgtatgccagtctctccagaagctttagccttccattgta 1103
|||||||||||||||||||||||| ||||| ||||||| |||||| || | ||||||||
Sbjct: 152 tggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgta 93
Query: 1104 accataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcg 1163
|||||||||||||||||| |||||||| || | |||||| ||||| ||||||||||| ||
Sbjct: 92 accataccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacg 33
Query: 1164 taacacttggttgagacgatcagaaagatt 1193
| ||| || || ||||||||||| |||||
Sbjct: 32 gagcacctgattaagacgatcagagagatt 3
>gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 385
Score = 327 bits (165), Expect = 3e-087
Identities = 324/377 (85%)
Strand = Plus / Minus
Query: 1535 ccctcttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatca 1594
|||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 381 ccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttctcttcataata 322
Query: 1595 cggtttttggaatcaatatagctcttgtccttcttttttcttccgccacagcaactttta 1654
||| ||| ||| ||||| || |||| ||| || || |||| |||||||| || |||
Sbjct: 321 cggctttgactatccatataacttttgttctttttcttccttctaccacagcagctctta 262
Query: 1655 atgataatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcc 1714
| | ||||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||
Sbjct: 261 acaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatccatacaaagcc 202
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 201 tgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacct 142
Query: 1775 ttcatattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctata 1834
||||| || ||||||||||| || |||||||| || ||||||||||| |||| ||| ||
Sbjct: 141 ttcatgttgatatcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatg 82
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
||||| |||||||||||||| || ||||| ||||||||||||||||| || |||||||||
Sbjct: 81 ccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatc 22
Query: 1895 atgaaacacatagcctc 1911
||||| ||||| |||||
Sbjct: 21 atgaagcacattgcctc 5
>gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 367
Score = 315 bits (159), Expect = 1e-083
Identities = 312/363 (85%)
Strand = Plus / Minus
Query: 1549 ttccatgttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatc 1608
||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||
Sbjct: 367 ttccatgttgaagatgggagctgaagattctgttctcttcataatacggctttgactatc 308
Query: 1609 aatatagctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttagg 1668
||||| || |||| ||| || || |||| |||||||| || |||| | |||||||||
Sbjct: 307 catataacttttgttctttttcttccttctaccacagcagctcttaacaacaatgttagg 248
Query: 1669 ctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaaca 1728
|||| ||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 247 ttccagatcagcttcagtcaaaacaggatcatatccatacaaagcctgcctattgaaaca 188
Query: 1729 gcatcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatc 1788
|||||||||||||||||| || || || ||||||||||||||||| ||||| || |||||
Sbjct: 187 gcatcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatc 128
Query: 1789 aaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttg 1848
|||||| || |||||||| || ||||||||||| |||| ||| || ||||| ||||||||
Sbjct: 127 aaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatctttg 68
Query: 1849 tggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagc 1908
|||||| || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 67 tggaaattgtacataacaagttttccttcctagagccggatccatcatgaagcacattgc 8
Query: 1909 ctc 1911
|||
Sbjct: 7 ctc 5
>gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 465
Score = 287 bits (145), Expect = 3e-075
Identities = 295/345 (85%)
Strand = Plus / Minus
Query: 2484 aatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtg 2543
||||||||||||||||||||| ||||||||| | || || || ||||||||||| | ||
Sbjct: 465 aatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaatg 406
Query: 2544 gatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctccctat 2603
||||||||||||| || |||||||| || ||||||| ||| || ||||| ||||| ||||
Sbjct: 405 gatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctctat 346
Query: 2604 catatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggga 2663
|||| ||||||||||| || || || || || ||||||||||| |||||||| |||||||
Sbjct: 345 catacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggga 286
Query: 2664 actgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccaca 2723
||||||| |||||||||||||| |||||||| || ||||| ||||||||||| |||||||
Sbjct: 285 actgatcaagaagccaagacaaggcaaaccagacctcacagataacagatactagccaca 226
Query: 2724 acccataagcatcttccactggatgagttatacgatattgaaagaagaaacataggatga 2783
| |||||||||| | |||||||||| | | ||||||||| |||||||| || |||||||
Sbjct: 225 atccataagcattattcactggatgactgacacgatattggaagaagaagcacaggatga 166
Query: 2784 taagccggagaacaatcacgatccgataaaggttaagctcgtttg 2828
|||| ||||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 165 taagacggagaatgatcactatccggtaaaggttgagctggtttg 121
>gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 285 bits (144), Expect = 1e-074
Identities = 336/400 (84%)
Strand = Plus / Minus
Query: 947 ccccagcataattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcag 1006
|||||||||| || |||||| ||||||| |||||||| ||||| || | |||||||||||
Sbjct: 627 ccccagcatagttactaatctcaggaatgataaatttattggtaaggagacagatagcag 568
Query: 1007 gaaggacgcagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgt 1066
|||| || || || || | || || || ||||| |||||||||||||||||||||||||
Sbjct: 567 gaagaacacaataggcaataagcggaatggatgtgattggataaacaatggtgttgatgt 508
Query: 1067 atgccagtctctccagaagctttagccttccattgtaaccataccagataggacagtgtc 1126
| ||||| ||||||| |||||| || | |||||||||||||||||||||||||| ||||
Sbjct: 507 aagccagcctctccaaaagcttcagtcggccattgtaaccataccagataggacaatgtc 448
Query: 1127 tgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcag 1186
|||| || | |||||| ||||| ||||||||||| || | ||| || || ||||||||||
Sbjct: 447 tgctgagcaaaatttccactgacccaagagcccaacggagcacctgattaagacgatcag 388
Query: 1187 aaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggata 1246
| ||||| ||||| |||||||||||||| ||||| || |||||||||||||||| |||
Sbjct: 387 agagattgattggtgcagaacccttgaaacaaggtcgtggtggcatgcagtagattgatt 328
Query: 1247 tccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatata 1306
||| |||||||||||||| || || ||||| | |||||| || ||||| || ||||| |
Sbjct: 327 gccatcctcttgcatgcattttaaacccagtcagaatatcctctgtaactgaaccataga 268
Query: 1307 tccatccgatctctttcccccattctgttttatcctcata 1346
|||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 267 tccagccaatctcttttccccattcagttttgtcctcata 228
Score = 224 bits (113), Expect = 4e-056
Identities = 188/214 (87%), Gaps = 8/214 (3%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||||||||
Sbjct: 214 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccaccttga 155
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 154 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 103
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatccctcttcta 1544
| || |||| |||||||||| ||||||||||||||| |||||||||| |||||||| |
Sbjct: 102 atttcctctgggacataagcactgacctttcatcctcataaccttcaataccctcttcga 43
Query: 1545 tatcttccatgttgaagatgggagccgaagattc 1578
| ||||||||||||||||||||||| ||||||||
Sbjct: 42 tgtcttccatgttgaagatgggagctgaagattc 9
>gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 617
Score = 276 bits (139), Expect = 1e-071
Identities = 350/419 (83%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 928 aaaagcaggatgaagaacgccccagcataattgctaatcgcaggaataataaatttgttg 987
||||| || ||||||||| ||||||||| || |||||| ||||||| |||||||| | |
Sbjct: 616 aaaagaagaatgaagaacatcccagcatagttactaatctcaggaatgataaatttat-g 558
Query: 988 gtgagtaaacagatagcaggaaggacgcagtatgctactagtgggatagatgtaattgga 1047
|| || | ||||||||||||||| || || || || | || || || ||||| ||||||
Sbjct: 557 gtaaggagacagatagcaggaagaacacaataggcaataagcggaatggatgtgattgga 498
Query: 1048 taaacaatggtgttgatgtatgccagtctctccagaagctttagccttccattgtaacca 1107
|||||||||||||||||||| ||||| ||||||| |||||| || | ||||||||||||
Sbjct: 497 taaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaacca 438
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaac 1167
|||||||||||||| |||||||| || | |||||| ||||| ||||||||||| || | |
Sbjct: 437 taccagataggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagc 378
Query: 1168 acttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagt 1227
|| || || ||||||||||| ||||| ||||| |||||||||||||| ||||| || ||
Sbjct: 377 acctgattaagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtggt 318
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
|||||||||||||| ||| ||| |||||||||||||| || || ||||| | ||||||
Sbjct: 317 ggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatcc 258
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| ||||| || ||||| ||||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 257 tctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcata 199
Score = 176 bits (89), Expect = 7e-042
Identities = 155/178 (87%), Gaps = 8/178 (4%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||||||||
Sbjct: 185 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccaccttga 126
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 125 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 74
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatccctcttc 1542
| || |||| |||||||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 73 atttcctctgggacataagcactgacctttcatcctcataaccttcaataccctcttc 16
>gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_C09_A002 5', mRNA sequence
Length = 606
Score = 248 bits (125), Expect = 2e-063
Identities = 257/301 (85%)
Strand = Plus / Plus
Query: 2528 ggaggttccttaagtggatccactgtactaacaaagacatcgattggagccaactgggat 2587
||||||||||| | ||||||||||||||| || |||||||| || ||||||| ||| ||
Sbjct: 204 ggaggttccttcaatggatccactgtactgacgaagacatcaatgggagccagctgtgac 263
Query: 2588 ggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagtttcacggttgata 2647
||||| ||||| |||||||| ||||||||||| || || || || || |||||||||||
Sbjct: 264 ggctctccctctctatcatacctcaatgcaagcctgtcaagatatgtctcacggttgatt 323
Query: 2648 ggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaata 2707
|||||||| |||||||||||||| |||||||||||||| |||||||| || ||||| |||
Sbjct: 324 ggataccattttgggaactgatcaagaagccaagacaaggcaaaccagacctcacagata 383
Query: 2708 acagatacaagccacaacccataagcatcttccactggatgagttatacgatattgaaag 2767
|||||||| |||||||| |||||||||| | |||||||||| | | || |||||| |||
Sbjct: 384 acagatactagccacaatccataagcattattcactggatgactgacaccatattggaag 443
Query: 2768 aagaaacataggatgataagccggagaacaatcacgatccgataaaggttaagctcgttt 2827
||||| || ||||||||||| ||||||| ||||| ||||| |||||||| |||| ||||
Sbjct: 444 aagaagcacaggatgataagacggagaatgatcactatccggtaaaggttgagctggttt 503
Query: 2828 g 2828
|
Sbjct: 504 g 504
>gb|BE918570.1|BE918570 OV1_8_E09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 631
Score = 244 bits (123), Expect = 4e-062
Identities = 332/404 (82%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 412 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 353
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 352 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 293
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 292 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 233
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 232 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 173
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
|||||||| ||||| |||||||| || || | | | |||||||||||||||||
Sbjct: 172 aggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttgaacacatat 113
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| || ||||| ||||| | ||||||||| || || |||||||| || ||
Sbjct: 112 agctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatca 53
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagag 818
||||| || | |||||| | ||||| |||||||| || |||||
Sbjct: 52 atcccagccaacactttcagcagaccctggaacaccgcgaagag 9
>gb|BF317903.1|BF317903 OV1_9_B10.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 511
Score = 244 bits (123), Expect = 4e-062
Identities = 332/404 (82%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 412 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 353
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 352 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 293
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 292 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 233
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 232 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 173
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
|||||||| ||||| |||||||| || || | | | |||||||||||||||||
Sbjct: 172 aggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttgaacacatat 113
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| || ||||| ||||| | ||||||||| || || |||||||| || ||
Sbjct: 112 agctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatca 53
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagag 818
||||| || | |||||| | ||||| |||||||| || |||||
Sbjct: 52 atcccagccaacactttcagcagaccctggaacaccgcgaagag 9
>gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 266
Score = 242 bits (122), Expect = 2e-061
Identities = 224/258 (86%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||| ||||| ||||| |||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 266 tcaacagtcagcatagttgaaccatcatcagaaacatagcatgacactttgtcgacaggg 207
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
|||||||||||||||||||||| |||||||||| | || || || ||||||||||| | |
Sbjct: 206 taatccacagcaagaatggacaagacagtgttgtccgtgatcagtggaggttccttcaat 147
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|||||||||||||| || |||||||| || ||||||| ||| || ||||| ||||| |||
Sbjct: 146 ggatccactgtactgacgaagacatcaatgggagccagctgtgaaggctctccctctcta 87
Query: 2603 tcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggg 2662
||||| ||||||||||| || || || || || ||||||||||| |||||||| ||||||
Sbjct: 86 tcatacctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttggg 27
Query: 2663 aactgatctagaagccaa 2680
|||||||| |||||||||
Sbjct: 26 aactgatcaagaagccaa 9
>gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 647
Score = 236 bits (119), Expect = 9e-060
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| |||||||| ||||| || | ||||||||||||||| || || || || | |
Sbjct: 144 caggaatgataaatttattggtaaggagacagatagcaggaagaacacaataggcaataa 203
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
| || || ||||| |||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 204 gcggaatggatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagct 263
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| || | |||||||||||||||||||||||||| |||||||| || | |||||| ||||
Sbjct: 264 tcagtcggccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactg 323
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| || | ||| || || ||||||||||| ||||| ||||| |||||||
Sbjct: 324 acccaagagcccaacggagcacctgattaagacgatcagagagattgattggtgcagaac 383
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
||||||| ||||| || |||||||||||||||| ||| ||| |||||||||||||| |
Sbjct: 384 ccttgaaacaaggtcgtggtggcatgcagtagattgattgccatcctcttgcatgcattt 443
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| || ||||| || ||||| |||||
Sbjct: 444 taaacccagtcagaatatcctctgtaactgaaccatagatcca 486
>gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_G09_A002 3', mRNA sequence
Length = 774
Score = 228 bits (115), Expect = 2e-057
Identities = 267/320 (83%)
Strand = Plus / Minus
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 326 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 267
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
|||||||| ||||| |||||||| || || | | | |||||||||||||||||
Sbjct: 266 aggttaatgacaagaacagtggtcggaggaatgagcaaactggtccacttgaacacatat 207
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| || ||||| ||||| | ||||||||| || || |||||||| || ||
Sbjct: 206 agctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatca 147
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
||||| || | |||||| | ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 146 atcccagccaacactttcagcagaccctggaacaccgtgaagagatgggcagaggtgcca 87
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 86 ccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccatctg 27
Query: 895 agctccaaaataccagtggc 914
|| ||||| |||||||||||
Sbjct: 26 agttccaatataccagtggc 7
>gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f242k13, DNA
sequence
Length = 651
Score = 220 bits (111), Expect = 6e-055
Identities = 234/275 (85%)
Strand = Plus / Minus
Query: 1036 gatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagctttagcctt 1095
||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| || |
Sbjct: 650 gatgtgattggataaacaatggtgttgatgtaagccagcctctccaaaagcttcagtcgg 591
Query: 1096 ccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaaga 1155
|||||||||||||||||||||||||| |||||||| || | |||||| ||||| ||||||
Sbjct: 590 ccattgtaaccataccagataggacaatgtctgctgagcaaaatttccactgacccaaga 531
Query: 1156 gcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaag 1215
||||| || | ||| || || ||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 530 gcccaacggagcacctgattaagacgatcagagagattgattggtgcagaacccttgaaa 471
Query: 1216 caaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatcttgaaacca 1275
||||| || |||||||||||||||| ||| ||| |||||||||||||| || || |||
Sbjct: 470 caaggtcgtggtggcatgcagtagattgattgccatcctcttgcatgcattttaaaccca 411
Query: 1276 gttaaaatatcttcagtaacagagccatatatcca 1310
|| | |||||| || ||||| || ||||| |||||
Sbjct: 410 gtcagaatatcctctgtaactgaaccatagatcca 376
Score = 165 bits (83), Expect = 3e-038
Identities = 143/164 (87%), Gaps = 8/164 (4%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||||||||
Sbjct: 231 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccaccttga 172
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 171 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 120
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaacct 1528
| || |||| |||||||||| ||||||||||||||| ||||||
Sbjct: 119 atttcctctgggacataagcactgacctttcatcctcataacct 76
>gb|BF481629.1|BF481629 FM1_20_D08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 322
Score = 220 bits (111), Expect = 6e-055
Identities = 168/187 (89%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||||| |
Sbjct: 187 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaata 128
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 127 gctttctgagtaggtgatatgaagggatcaatcttcacccacagcagtgagaatatggaa 68
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 67 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 8
Query: 532 cccttca 538
|||||||
Sbjct: 7 cccttca 1
>gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 359
Score = 220 bits (111), Expect = 6e-055
Identities = 189/216 (87%), Gaps = 8/216 (3%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||| ||||
Sbjct: 216 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccactttga 157
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 156 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 105
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatccctcttcta 1544
| || |||| |||||||||| ||||||||||||||| |||||||||| |||||||| |
Sbjct: 104 atttcctctgggacataagcactgacctttcatcctcataaccttcaataccctcttcga 45
Query: 1545 tatcttccatgttgaagatgggagccgaagattctg 1580
| ||||||||||||||||||||||| ||||||||||
Sbjct: 44 tgtcttccatgttgaagatgggagctgaagattctg 9
Score = 89.7 bits (45), Expect = 1e-015
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 1226 gtggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatat 1285
|||||||||||||||| ||| ||| |||||||||||||| || || ||||| | |||||
Sbjct: 350 gtggcatgcagtagattgattgccatcctcttgcatgcattttaaacccagtcagaatat 291
Query: 1286 cttcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcat 1345
| || ||||| || ||||| ||||| || |||||||| |||||||| ||||| |||||||
Sbjct: 290 cctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcat 231
Query: 1346 a 1346
|
Sbjct: 230 a 230
>gb|CD213045.1|CD213045 HS1_28_B08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_28_B08_A012 3', mRNA sequence
Length = 509
Score = 216 bits (109), Expect = 9e-054
Identities = 160/177 (90%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| |
Sbjct: 177 ttatccagcaggcagttcagatcaaatcagcagtttacaccgcactgcccccgggaaata 118
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 117 gctttctgagtaggtgatatgaagggatcgatcttcacccacagcagtgagaatatggaa 58
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatg 528
||||| |||| ||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 57 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatg 1
Score = 131 bits (66), Expect = 4e-028
Identities = 174/206 (84%), Gaps = 3/206 (1%)
Strand = Plus / Minus
Query: 54 aatgtcaatgaccaaacagctcaatcagtacttgaagttccaacatacagattacaccac 113
||||||| | |||||||||| ||| | ||||||||| || ||||| |||| ||| |||
Sbjct: 473 aatgtcattaaccaaacagcaaaatagggacttgaagt-cctacatatagataacatcac 415
Query: 114 gacagtccagagcccacggtgaacaggtagtcacgacagtcaacatgaaacaggcactac 173
|||||||| |||||||||||| || ||||||||||| ||| | ||||||| |||||
Sbjct: 414 aacagtccacagcccacggtgagcatatagtcacgacattcatgaagaaacagacactaa 355
Query: 174 ttactgctacttagctacaaataagtagcacgacataagttgacaaagtttcatgctgcc 233
|||||||||||||||||| |||||||| |||||||||||||||| |||||| | |||||
Sbjct: 354 ttactgctacttagctacgaataagtaacacgacataagttgac-aagttttgtactgcc 296
Query: 234 ca-ccccaaatgcagtagagtgaact 258
|| |||||||||||| ||||| ||||
Sbjct: 295 cacccccaaatgcagcagagtcaact 270
>gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105330, DNA
sequence
Length = 705
Score = 212 bits (107), Expect = 1e-052
Identities = 218/255 (85%)
Strand = Plus / Minus
Query: 1525 accttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttct 1584
|||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 422 accttcaataccctcttcgatgtcttccatgttgaagatgggagctgaagattctgttct 363
Query: 1585 cttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccaca 1644
||||||| |||| ||| ||| ||||| || |||| ||| || || |||| |||||
Sbjct: 362 cttcataatacggctttgactatccatataacttttgttctttttcttccttctaccaca 303
Query: 1645 gcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagcc 1704
||| || |||| | ||||||||| |||| ||||||||| ||||| ||||||||||| ||
Sbjct: 302 gcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatcatatcc 243
Query: 1705 atacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgcc 1764
|||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 242 atacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctgaatgcc 183
Query: 1765 atctagacccttcat 1779
||||||||| |||||
Sbjct: 182 atctagacctttcat 168
Score = 111 bits (56), Expect = 4e-022
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||||||||| |||||||||||||| ||||||||||||||||| || |||| |||||
Sbjct: 695 ggtggatgcaatgaaaattggagactgaccaaagcgtttctccaatttcctctgggacat 636
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
||||| ||||||||||||||| ||||||
Sbjct: 635 aagcactgacctttcatcctcataacct 608
Score = 67.9 bits (34), Expect = 5e-009
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| || |||||||| || ||||||||||| |||| ||| || ||||| |||||
Sbjct: 82 atcaaagaaaactatgttccgattagcatatcgatcgtgcatgtcaatgccatcgaatct 23
Query: 1846 ttgtggaaactgaacata 1863
||||||||| || |||||
Sbjct: 22 ttgtggaaattgtacata 5
>gb|CN129574.1|CN129574 RHOH1_36_E05.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_E05_A002 3', mRNA sequence
Length = 768
Score = 212 bits (107), Expect = 1e-052
Identities = 224/263 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| || || ||||| ||
Sbjct: 285 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggaaaaaatggacgcg 226
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||||||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 225 aggaggatggaccaaacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 166
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 165 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 106
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|||||||| |||||||| || |||||||| |||||||| | ||| ||||| || || |||
Sbjct: 105 ggaccccaggattggtaaccgctgttgatggcatacgaaattcctgccaccattccgacc 46
Query: 655 aggttaatcacaagcacagtggt 677
|||||||| ||||| ||||||||
Sbjct: 45 aggttaatgacaagaacagtggt 23
>gb|BF586500.1|BF586500 FM1_29_A05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 455
Score = 210 bits (106), Expect = 5e-052
Identities = 163/182 (89%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||||| |
Sbjct: 182 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaata 123
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 122 gctttctgagtaggtgatatgaagggatcaatcttcacccacagcagtgagaatatggaa 63
Query: 472 gcaagaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgaga 531
||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 62 gcaaggaggatggaccaaacgatgacgatggtcggtgtacggttctgtttccccatgaga 3
Query: 532 cc 533
||
Sbjct: 2 cc 1
Score = 135 bits (68), Expect = 3e-029
Identities = 146/168 (86%), Gaps = 3/168 (1%)
Strand = Plus / Minus
Query: 81 gtacttgaagttccaacatacagattacaccacgacagtccagagcccacggtgaacagg 140
||||||||||| || ||||| |||| ||| ||| |||||||| ||||||||||||||| |
Sbjct: 451 gtacttgaagt-cctacatatagataacatcacaacagtccacagcccacggtgaacatg 393
Query: 141 tagtcacgacagtcaacatgaaacaggcactacttactgctacttagctacaaataagta 200
||||||||||| ||| | ||||||| ||||| ||||||||||||| |||| ||||||||
Sbjct: 392 tagtcacgacattcaggaagaaacagacactaattactgctacttatctacgaataagta 333
Query: 201 gcacgacataagttgacaaagtttcatgctgccca-ccccaaatgcag 247
|||||||||||||||| |||||| | ||||||| ||||||||||||
Sbjct: 332 acacgacataagttgac-aagttttgtactgcccacccccaaatgcag 286
>gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105330, DNA
sequence
Length = 657
Score = 190 bits (96), Expect = 5e-046
Identities = 216/256 (84%)
Strand = Plus / Plus
Query: 1055 tggtgttgatgtatgccagtctctccagaagctttagccttccattgtaaccataccaga 1114
||||||||||||| ||||| ||||||| |||||| || | |||||||||||||||||||
Sbjct: 1 tggtgttgatgtaagccagcctctccaaaagcttcagtcggccattgtaaccataccaga 60
Query: 1115 taggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggt 1174
||||||| |||||||| || | |||||| ||||| ||||||||||| || | ||| || |
Sbjct: 61 taggacaatgtctgctgagcaaaatttccactgacccaagagcccaacggagcacctgat 120
Query: 1175 tgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgc 1234
| ||||||||||| ||||| ||||| |||||||||||||| ||||| || |||||||||
Sbjct: 121 taagacgatcagagagattgattggtgcagaacccttgaaacaaggtcgtggtggcatgc 180
Query: 1235 agtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaa 1294
||||||| ||| ||| |||||||||||||| || || ||||| | |||||| || ||||
Sbjct: 181 agtagattgattgccatcctcttgcatgcattttaaacccagtcagaatatcctctgtaa 240
Query: 1295 cagagccatatatcca 1310
| || ||||| |||||
Sbjct: 241 ctgaaccatagatcca 256
Score = 165 bits (83), Expect = 3e-038
Identities = 143/164 (87%), Gaps = 8/164 (4%)
Strand = Plus / Plus
Query: 1365 acatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccaccttga 1424
||||| |||||||||||||| || ||| |||||||||||||||| |||||||||||||||
Sbjct: 401 acatggatagcttcctttagtagagaagctgggtttgttgaaggtggtatgccaccttga 460
Query: 1425 gtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgtttctcca 1484
|||||||| |||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 461 gtcataaa--------ggtggatgcaatgaaaattggagactgaccaaagcgtttctcca 512
Query: 1485 agctcttctgagacataagcagtgacctttcatcctcgtaacct 1528
| || |||| |||||||||| ||||||||||||||| ||||||
Sbjct: 513 atttcctctgggacataagcactgacctttcatcctcataacct 556
>gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057j16, DNA
sequence
Length = 661
Score = 190 bits (96), Expect = 5e-046
Identities = 189/220 (85%)
Strand = Plus / Minus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || || || || ||||||||||| |||||||| ||||||||||||
Sbjct: 404 ctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaactga 345
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
|| |||||||||||||| |||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 344 tcaagaagccaagacaaggcaaaccagacctcacagataacagatactagccacaatcca 285
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacataggatgataagc 2788
||||||| | |||||||||| | | ||||||||| |||||||| || |||||||||||
Sbjct: 284 taagcattattcactggatgactgacacgatattggaagaagaagcacaggatgataaga 225
Query: 2789 cggagaacaatcacgatccgataaaggttaagctcgtttg 2828
||||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 224 cggagaatgatcactatccggtaaaggttgagctggtttg 185
Score = 153 bits (77), Expect = 1e-034
Identities = 140/161 (86%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 660 tcatcagaaacatagcatgacactttgtcgacagggtaatccacagcaagaatggacaaa 601
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagaca 2566
||||||||| | || || || ||||||||||| | ||||||||||||||| || ||||||
Sbjct: 600 acagtgttggccgtgatcagtggaggttccttcaatggatccactgtactgacgaagaca 541
Query: 2567 tcgattggagccaactgggatggctcaccctccctatcata 2607
|| || ||||||| ||| || ||||| ||||| ||||||||
Sbjct: 540 tcaatgggagccagctgtgacggctctccctctctatcata 500
>gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057j16, DNA
sequence
Length = 778
Score = 184 bits (93), Expect = 3e-044
Identities = 147/165 (89%)
Strand = Plus / Plus
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
||||| |||||||||||||| || ||||| ||||||||||||||||| || |||||||||
Sbjct: 16 ccatcgaatctttgtggaaattgtacataacaagttttccttcctagagccggatccatc 75
Query: 1895 atgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccaca 1954
||||| ||||| || |||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 76 atgaagcacattgcttctctaagagctttgctgctgttgaagtaatggtcacaatccaca 135
Query: 1955 ttaagaagataagcaccattcgtcaggacagctgatacgcgaatc 1999
|| |||||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 136 ttgagaagataggcaccatttgtcagcacagcagatacacgaatc 180
Score = 133 bits (67), Expect = 1e-028
Identities = 106/119 (89%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 273 gcattcattgcaccagccttcttgtgatgctggaagcctggtctcttttcacgagagaca 332
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||| || || || ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 333 tagacaagacgcggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaa 391
Score = 115 bits (58), Expect = 2e-023
Identities = 116/136 (85%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || ||||| || ||||| |||||||||||||| | ||| |||||||||||||||
Sbjct: 484 atcatgccaggatggtccctaggattattcccaggccaagcagttccatcagccatggtc 543
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||| | ||| || ||||| ||||||||||||| ||| | |||||||||
Sbjct: 544 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaat 603
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 604 tcttcatactctctct 619
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| || || ||||| || ||||| ||||| || ||||||||||| | |||||||||
Sbjct: 706 cttcattgctcgtctttccttaacaaatgaagggtgaattttgtccttcaagtaatctat 765
Query: 2323 ctttcgagcaaag 2335
||| ||||||||
Sbjct: 766 tttttgagcaaag 778
>gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f298i22, DNA
sequence
Length = 689
Score = 182 bits (92), Expect = 1e-043
Identities = 188/220 (85%)
Strand = Plus / Minus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || || || || ||||||||||| |||||||| ||||||||||||
Sbjct: 401 ctcaatgcaagcctgtcaagatatgtctcacggttgattggataccattttgggaactga 342
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
|| |||||||||||||| |||||||| | ||||| ||||||||||| |||||||| |||
Sbjct: 341 tcaagaagccaagacaaggcaaaccagccctcacagataacagatactagccacaatcca 282
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacataggatgataagc 2788
||||||| | |||||||||| | | ||||||||| |||||||| || |||||||||||
Sbjct: 281 taagcattattcactggatgactgacacgatattggaagaagaagcacaggatgataaga 222
Query: 2789 cggagaacaatcacgatccgataaaggttaagctcgtttg 2828
||||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 221 cggagaatgatcactatccggtaaaggttgagctggtttg 182
Score = 176 bits (89), Expect = 7e-042
Identities = 161/185 (87%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
||||| |||| |||||||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 681 tcaaatgtcagcatagctgaaccatcatcagaaacatagcatgacactttgtcgacaggg 622
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
|||||||||||||||||||||| ||||||||| | || || || ||||||||||| | |
Sbjct: 621 taatccacagcaagaatggacaaaacagtgttggccgtgatcagtggaggttccttcaat 562
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|||||||||||||| || |||||||| || ||||||| ||| || ||||| ||||| |||
Sbjct: 561 ggatccactgtactgacgaagacatcaatgggagccagctgtgacggctctccctctcta 502
Query: 2603 tcata 2607
|||||
Sbjct: 501 tcata 497
>gb|CF433645.1|CF433645 NIT1_28_F11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_F11_A002 3', mRNA sequence
Length = 688
Score = 178 bits (90), Expect = 2e-042
Identities = 186/218 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||| ||||| ||||| ||||| ||
Sbjct: 221 ttctgtgtcggggagatgaaaggatcgatcttcacccgcagcaaggagaagatggacgcg 162
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 161 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 102
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 101 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 42
Query: 595 ggaccccatgattggtagccactgttgatagcatacga 632
|||||||| |||||||| || |||||||| ||||||||
Sbjct: 41 ggaccccaggattggtaaccgctgttgatggcatacga 4
>gb|BI074880.1|BI074880 IP1_17_A09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 176 bits (89), Expect = 7e-042
Identities = 179/209 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 211 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 152
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 151 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 92
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|||||||| ||||| || ||||||||||||||||| | ||||||||||| || || ||
Sbjct: 91 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctttccaaagagc 32
Query: 595 ggaccccatgattggtagccactgttgat 623
|||||||| |||||||| || ||||||||
Sbjct: 31 ggaccccaggattggtaaccgctgttgat 3
>gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 473
Score = 172 bits (87), Expect = 1e-040
Identities = 297/368 (80%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| ||||| || |||| || ||| ||||||| || || ||||| |||| ||
Sbjct: 376 atcattccaggatggtccctagtattgttcncaggccaaggtgtaccatcttgcatgatc 317
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||||||||| | |||||| || || || || ||||||| ||| || ||||||||
Sbjct: 316 catccctcctcaggaactttttgtgccttggctactagggcattgatacggactttgaat 257
Query: 2249 tcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcc 2308
|||||||| || |||||||| ||||| | |||||||||||| |||| ||| | ||||||
Sbjct: 256 tcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttgaactttgtct 197
Query: 2309 tttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgt 2368
|| | |||||| || || |||||||||| ||||||| |||||||| || |||||||
Sbjct: 196 ttcaagtaatcaattttctgagcaaagtaccactctggggccctaggctctatgttgtac 137
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||| || || ||||||||||| || |||||||||| |||||||| || || ||||||
Sbjct: 136 ttcttacagaatggaacccattttctagcaaactctgaagtttcagagagcgcatcaaaa 77
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|||| |||||| | || |||||||||||||| || ||||| |||||||| || || ||
Sbjct: 76 gtcagcatagcagccccatcatcagaaacatagcaagataccttgtcaaccggatagtca 17
Query: 2489 acagcaag 2496
||||||||
Sbjct: 16 acagcaag 9
>gb|BF481487.1|BF481487 FM1_19_G05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 464
Score = 168 bits (85), Expect = 2e-039
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaaga 411
|||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||||| |
Sbjct: 153 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaata 94
Query: 412 gccttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaa 471
|| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 93 gctttctgagtaggtgatatgaagggatcaatcttcacccacagcagtgagaatatggaa 34
Query: 472 gcaagaaggacggaccaaacaatgacgatggtc 504
||||| |||| ||||||||| ||||||||||||
Sbjct: 33 gcaaggaggatggaccaaacgatgacgatggtc 1
Score = 135 bits (68), Expect = 3e-029
Identities = 146/168 (86%), Gaps = 3/168 (1%)
Strand = Plus / Minus
Query: 81 gtacttgaagttccaacatacagattacaccacgacagtccagagcccacggtgaacagg 140
||||||||||| || ||||| |||| ||| ||| |||||||| ||||||||||||||| |
Sbjct: 422 gtacttgaagt-cctacatatagataacatcacaacagtccacagcccacggtgaacatg 364
Query: 141 tagtcacgacagtcaacatgaaacaggcactacttactgctacttagctacaaataagta 200
||||||||||| ||| | ||||||| ||||| ||||||||||||| |||| ||||||||
Sbjct: 363 tagtcacgacattcaggaagaaacagacactaattactgctacttatctacgaataagta 304
Query: 201 gcacgacataagttgacaaagtttcatgctgccca-ccccaaatgcag 247
|||||||||||||||| |||||| | ||||||| ||||||||||||
Sbjct: 303 acacgacataagttgac-aagttttgtactgcccacccccaaatgcag 257
>gb|BE917989.1|BE917989 OV1_8_E09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 629
Score = 155 bits (78), Expect = 3e-035
Identities = 147/170 (86%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 178 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 119
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 118 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 59
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctt 584
|||||||| ||||| || ||||||||||||||||| | |||||||||||
Sbjct: 58 ttcaggaaggggtacagatggaggatcacccagatcgagaagaacagctt 9
>gb|BF317768.1|BF317768 OV1_9_B10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 612
Score = 145 bits (73), Expect = 3e-032
Identities = 133/153 (86%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 153 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 94
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 93 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 34
Query: 535 ttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||||| || |||||||||||||||
Sbjct: 33 ttcaggaaggggtacagatggaggatcacccag 1
>gb|BE355115.1|BE355115 DG1_113_C09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 612
Score = 141 bits (71), Expect = 4e-031
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 160 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 101
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | |||||||||| |
Sbjct: 100 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagacac 41
Query: 535 ttcaggaaagggtagaggtggaggatcacccagat 569
|||||||| ||||| || |||||||||||||||||
Sbjct: 40 ttcaggaaggggtacagatggaggatcacccagat 6
>gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 668
Score = 139 bits (70), Expect = 2e-030
Identities = 172/206 (83%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| ||
Sbjct: 666 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtg 607
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
||||| || ||||| |||||| | ||||| || || || ||||| |||| |||||| |||
Sbjct: 606 gccttagaggtgacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctgg 547
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| | ||| ||||| | |||||||| |||||||||||||| || ||||||
Sbjct: 546 aagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctccac 487
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||||||||||||||||||
Sbjct: 486 cattcatcaatgccaacaccactcca 461
Score = 60.0 bits (30), Expect = 1e-006
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 1105 ccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgt 1164
|||||||| || ||||| || ||||| | |||||||||| |||||||||||||| ||
Sbjct: 164 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 105
Query: 1165 aacacttggttgagacgatcagaaagattaattggagcagaacccttgaa 1214
| |||||| || | |||||| ||||| || || |||||||| ||||||||
Sbjct: 104 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaa 55
>gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141932, DNA
sequence
Length = 621
Score = 139 bits (70), Expect = 2e-030
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| ||
Sbjct: 336 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtg 395
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
||||| || ||||| |||||| | ||||| || || || ||||| |||| |||||| |||
Sbjct: 396 gccttagaggtgacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctgg 455
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| | ||| ||||| | |||||||| |||||||||||||| || ||||||
Sbjct: 456 aagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctccac 515
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||||||||||||||||||
Sbjct: 516 cattcatcaatgccaacaccactcca 541
Score = 101 bits (51), Expect = 4e-019
Identities = 111/131 (84%)
Strand = Plus / Plus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 150 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 209
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 210 atcacccagaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 269
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 270 ttgatcgcata 280
>gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_2_G12_A002 3', mRNA sequence
Length = 743
Score = 139 bits (70), Expect = 2e-030
Identities = 172/206 (83%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| ||
Sbjct: 262 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtg 203
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
||||| || ||||| |||||| | ||||| || || || ||||| |||| |||||| |||
Sbjct: 202 gccttagaggtgacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctgg 143
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| | ||| ||||| | |||||||| |||||||||||||| || ||||||
Sbjct: 142 aagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctccac 83
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||||||||||||||||||
Sbjct: 82 cattcatcaatgccaacaccactcca 57
Score = 101 bits (51), Expect = 4e-019
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 448 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 389
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 388 atcacccagaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 329
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 328 ttgatcgcata 318
>gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f298i22, DNA
sequence
Length = 644
Score = 133 bits (67), Expect = 1e-028
Identities = 106/119 (89%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 69 gcattcattgcaccagccttcttgtgatgctggaagcctggtctcttttcacgagagaca 128
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||| || || || ||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 129 tagacaagacgcggtaattcatttccatcagtgtcaagaccaccactgtgccccaagaa 187
Score = 115 bits (58), Expect = 2e-023
Identities = 116/136 (85%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || ||||| || ||||| |||||||||||||| | ||| |||||||||||||||
Sbjct: 280 atcatgccaggatggtccctaggattattcccaggccaagcagttccatcagccatggtc 339
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||| | ||| || ||||| ||||||||||||| ||| | |||||||||
Sbjct: 340 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttactttgaat 399
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 400 tcttcatactctctct 415
Score = 113 bits (57), Expect = 9e-023
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| || || ||||| || ||||| |||||||| ||||||||||| ||| |||||||
Sbjct: 502 cttcattgctcgtctttccttaacaaatgaaggttgaattttgtccttcagggaatctat 561
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| ||||||||||||| |||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 562 tttttgagcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaaggg 621
Query: 2383 aaccc 2387
|||||
Sbjct: 622 aaccc 626
>gb|CD227257.1|CD227257 CCC1_50_D12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_D12_A007 3', mRNA sequence
Length = 611
Score = 131 bits (66), Expect = 4e-028
Identities = 126/146 (86%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 146 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 87
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||||||||
Sbjct: 86 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgagaccc 27
Query: 535 ttcaggaaagggtagaggtggaggat 560
|||||||| ||||| || ||||||||
Sbjct: 26 ttcaggaaggggtacagatggaggat 1
>gb|CF073545.1|CF073545 FE1_10_F02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_10_F02_A002 5', mRNA sequence
Length = 490
Score = 125 bits (63), Expect = 2e-026
Identities = 129/151 (85%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| || || ||||| ||
Sbjct: 340 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggaaaagatggacgcg 399
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||| ||||
Sbjct: 400 aggaggatggaccacacaatgacgattgttggtgtgcggttctgcctgcccatgaaaccc 459
Query: 535 ttcaggaaagggtagaggtggaggatcaccc 565
|||||||| ||||| || |||||||||||||
Sbjct: 460 ttcaggaaggggtacagatggaggatcaccc 490
>gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 669
Score = 123 bits (62), Expect = 1e-025
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| |||||||| ||||| ||||| || ||||| |
Sbjct: 266 atcagaagggttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatctgag 207
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||||| |||||||| || || ||||| || | |||||| |||
Sbjct: 206 gcctttgaggtgacagtgaagttggtgtcgataccagcaagcaccttgaggagaccctgg 147
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || || || || || |||||| | || ||||||||||| || || ||||| ||||||
Sbjct: 146 aagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcattcctccac 87
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||| ||||||||||||||
Sbjct: 86 cactcgtcaattccaacaccactcca 61
Score = 87.7 bits (44), Expect = 5e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| |||||||||||||| ||||| ||||| | |||
Sbjct: 455 acgatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgc 396
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || ||||| |||||||||||||| ||
Sbjct: 395 acaatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccg 336
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| ||||| || | ||||| || | ||||||||||||
Sbjct: 335 ctgttgatcgcataggagataccagcaacaacaccaaccaggtt 292
>gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_C03_A002 3', mRNA sequence
Length = 857
Score = 123 bits (62), Expect = 1e-025
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| |||||||| ||||| ||||| || ||||| |
Sbjct: 217 atcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatctgag 158
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||||| |||||||| || || ||||| || | |||||| |||
Sbjct: 157 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttgaggagaccctgg 98
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || || || || || |||||| | || ||||||||||| || || ||||| ||||||
Sbjct: 97 aagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcattcctccac 38
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||| ||||||||||||||
Sbjct: 37 cactcgtcaattccaacaccactcca 12
Score = 63.9 bits (32), Expect = 8e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| ||||||||||| || ||||| ||||| | |||
Sbjct: 406 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgc 347
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || || || |||||||||||||| ||
Sbjct: 346 acaatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccg 287
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| || || || | ||||| || | ||||||||||||
Sbjct: 286 ctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 243
>gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 721
Score = 115 bits (58), Expect = 2e-023
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 178 ccttggaacacagcaaagagatgtgaagacacacctccaatgacccaaaactgctcattt 119
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
||||||||||| || ||||| |||||||||||||
Sbjct: 118 ctccaccaatcatcgatgcctacaccactccatc 85
Score = 81.8 bits (41), Expect = 3e-013
Identities = 146/181 (80%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| ||||||||||| || ||||| | |||| |||||| |||||||| || || ||
Sbjct: 526 acccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgttggc 467
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| | ||||||| |||| | |||||||| ||||| ||||| || |||| ||||||||
Sbjct: 466 gttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacccaa 407
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| ||||||||| ||||||||||| || || |||||||||| || ||| ||||||| |||
Sbjct: 406 aatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgattgca 347
Query: 628 t 628
|
Sbjct: 346 t 346
>gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_20_C10_A002 3', mRNA sequence
Length = 666
Score = 107 bits (54), Expect = 6e-021
Identities = 150/182 (82%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || ||||| ||||||||||| || ||||| ||
Sbjct: 188 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtg 129
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
||||| || ||||| |||||| | ||||| || || || ||||| |||| |||||| |||
Sbjct: 128 gccttagaggtgacagtgaagctcgtgtcaataccagcaagcacctttaggagaccctgg 69
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| | ||| ||||| | |||||||| |||||||||||||| || ||||||
Sbjct: 68 aagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctcgttcctccac 9
Query: 865 ca 866
||
Sbjct: 8 ca 7
Score = 101 bits (51), Expect = 4e-019
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||||||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 374 atggtcggtgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 315
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
||||||||| || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 314 gtcacccagaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 255
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 254 ttgatcgcata 244
>gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_32_H10_A002 3', mRNA sequence
Length = 785
Score = 107 bits (54), Expect = 6e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
||||||| |||||||||||||||| |||||||| ||||| ||||| || ||||| |
Sbjct: 213 atcagaaacgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatctgag 154
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||
Sbjct: 153 gcctttgaggtgacagtgaaattggtgtcgataccggcaagcaccttgaggagaccctgg 94
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || || || || || |||||| | || ||||||||||| || || ||||| ||||||
Sbjct: 93 aagacggcgaaaaggtgggcagagatacctccaatgacccagaattgttcattcctccac 34
Query: 865 caatcctcaatgccaacaccactcca 890
|| || ||||| ||||||||||||||
Sbjct: 33 cactcgtcaattccaacaccactcca 8
Score = 56.0 bits (28), Expect = 2e-005
Identities = 130/164 (79%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| ||||||||||| || ||||| ||||| | |||
Sbjct: 402 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgc 343
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||| | || ||||| ||||| || || || || |||||||||||||| ||
Sbjct: 342 acaatcacccaaaaggcgaagaaaagcttgccaaagagcgggccccatgattggtaaccg 283
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| || || || | ||||| || | ||||||||||||
Sbjct: 282 ctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 239
>gb|BE918278.1|BE918278 OV1_1_D06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 111
Score = 105 bits (53), Expect = 2e-020
Identities = 95/109 (87%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| || ||||||||||||||||||| ||||| ||||| || || |||| ||||||
Sbjct: 109 atgaaaggatcgatcttcacccacagcaaggagaagatggacgcgaggaggatggaccag 50
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttca 538
||||||||||| || ||||||||||||||| | ||||||||||||||||
Sbjct: 49 acaatgacgattgttggtgtgcggttctgcctgcccatgagacccttca 1
>gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 362
Score = 103 bits (52), Expect = 9e-020
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 96 ccttggaacacagcaaagagatgtgaagacacacctccaatgacccaaaactgctcattt 37
Query: 859 ctccaccaatcctcaatgccaacaccac 886
||||||||||| || ||||| |||||||
Sbjct: 36 ctccaccaatcatcgatgcctacaccac 9
Score = 54.0 bits (27), Expect = 7e-005
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| |||||||| | ||||||||| ||||||||||| || ||
Sbjct: 354 aggaatgggtaaagatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggc 295
Query: 598 ccccatgattggtagccactgttgatagcat 628
|||||||||| || ||| ||||||| ||||
Sbjct: 294 ccccatgattcatatccattgttgattgcat 264
>gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 101 bits (51), Expect = 4e-019
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 242 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 183
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 182 atcacccagaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 123
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 122 ttgatcgcata 112
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||||||| |||||||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 56 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatc 1
>gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 101 bits (51), Expect = 4e-019
Identities = 111/131 (84%)
Strand = Plus / Minus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 292 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 233
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 232 atcacccagaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 173
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 172 ttgatcgcata 162
Score = 73.8 bits (37), Expect = 8e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
||||||||||||||||||||||||| || ||||| ||||||||||| || ||||| ||
Sbjct: 106 atcagaagagttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatcagtg 47
Query: 745 gcctttgatgtgaccgtgaag 765
||||| || ||||| ||||||
Sbjct: 46 gccttagaggtgacagtgaag 26
>gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107412, DNA
sequence
Length = 287
Score = 99.6 bits (50), Expect = 1e-018
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 2474 tcaacagggtaatccacagcaagaatggacaggacagtgttgccagtaattagaggaggt 2533
|||||||| ||||||||||| || ||||||| || ||||| ||||||||| |||||||
Sbjct: 286 tcaacaggataatccacagccagtatggacaaaactgtgtttgcagtaattaaaggaggt 227
Query: 2534 tccttaagtggatccactgtactaacaaagacatcgattggagcca 2579
||||| | |||||| |||||||| ||||| ||||||||||||||||
Sbjct: 226 tccttcattggatcaactgtactgacaaatacatcgattggagcca 181
>gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 401
Score = 99.6 bits (50), Expect = 1e-018
Identities = 251/318 (78%)
Strand = Plus / Minus
Query: 2247 actcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgt 2306
|||||||||| |||||||||||||||| | || || |||||||| || ||||| ||||
Sbjct: 371 actcttcatagtccctcttcatagccctacgctccttgacaaaagacgggtgtatcttgt 312
Query: 2307 cctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgt 2366
|||| | ||| || || || | | ||||| ||||| ||||| | || |||||| |||
Sbjct: 311 ccttcaagtagtcaattttctgcgagaagtagaactcaggagctcgtggctcaatggtgt 252
Query: 2367 gtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaa 2426
||||||||||| || |||||||| || ||||| ||||| || || | || | |||||
Sbjct: 251 acttcttgcaaaatggcacccattttctagcaaattctgcagtctctgcgagcgattcaa 192
Query: 2427 aagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaat 2486
| || | |||||| ||||| |||||||| || || ||||| | || || ||||| || |
Sbjct: 191 atgtgagcatagcagaaccatcatcagatacgtagcatgagatcttctcgacaggatagt 132
Query: 2487 ccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggat 2546
||||||||||||| ||||| |||||||| |||| ||||| ||||| || || | |||||
Sbjct: 131 ccacagcaagaatagacagcacagtgtttgcagtgattagtggaggctcttttaatggat 72
Query: 2547 ccactgtactaacaaaga 2564
|||||||||| |||||||
Sbjct: 71 ccactgtactgacaaaga 54
>gb|CN129665.1|CN129665 RHOH1_36_E05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_E05_A002 5', mRNA sequence
Length = 643
Score = 99.6 bits (50), Expect = 1e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || || |||||||||||||||| || || ||||| |
Sbjct: 498 ttctgtgtcggggagatgaaaggatccatcttcacccacagcaaggaaaaaatggacccg 557
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||| ||||
Sbjct: 558 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatgaaaccc 617
Query: 535 ttcaggaaagggtagaggtggaggat 560
|||||||| ||||| || ||||||||
Sbjct: 618 ttcaggaaggggtacagatggaggat 643
>gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 455
Score = 97.6 bits (49), Expect = 5e-018
Identities = 311/396 (78%), Gaps = 2/396 (0%)
Strand = Plus / Minus
Query: 2162 ggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgcttttgca 2221
||||| || |||||||| |||| |||| || |||||||| | ||| || || || |||
Sbjct: 446 ggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagca 387
Query: 2222 acaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccgcctttct 2281
|||||| ||| |||| |||||||| |||||||| || |||||||| || || | |||
Sbjct: 386 acaaggccatttatcctaactttgaattcttcatattctctcttcatggctcggcggtct 327
Query: 2282 ttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagca-aagtaaaa 2340
|| ||||| ||||| || | ||||||||| | |||||| || |||| ||| ||||| |
Sbjct: 326 ttaacaaatgaagggtgcactttgtccttcaagtaatcaat-tttctggcagaagtacca 268
Query: 2341 ctctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaa 2400
|| ||||| |||||||||||||||| ||||| ||| || |||||||| || |||||
Sbjct: 267 ttcaggagctctaggttcaatgttgtacttcttaacaaatggtacccattttctagcaaa 208
Query: 2401 ctctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacata 2460
||||| || |||| ||| || ||||| |||| ||| || | || |||||||| |||||
Sbjct: 207 ctctgaagtctcagctagtgcatcaaatgtcagcattgcagctccatcatcagatacata 148
Query: 2461 acatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgttgccagt 2520
|| || || || || |||||||||||||||||||||||||| || || || ||| ||||
Sbjct: 147 gcaagagaccttatccacagggtaatccacagcaagaatggatagcacggtattggcagt 88
Query: 2521 aattagaggaggttccttaagtggatccactgtact 2556
|| |||||||| ||||| | ||| || ||||||||
Sbjct: 87 aacaagaggaggctccttcattgggtcgactgtact 52
>gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 5', mRNA sequence
Length = 639
Score = 95.6 bits (48), Expect = 2e-017
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
|||||||| || |||||||||||||| || | ||||||||| |||||||| ||||||||
Sbjct: 403 agaatttccacagaaccaagagcccaccggagcacttggttcagacgatctgaaagattg 344
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| ||||| ||||||||||| || || ||| |||
Sbjct: 343 atgggagcagatcccttgaaagctggccgcttaggcatgcagtaaatcgaccgccagcct 284
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| ||| ||||||||||| ||||| | ||||||||| || ||||| ||||| ||||| ||
Sbjct: 283 cgtgcgtgcatcttgaatccagtaagaatatcttctgtcacagaaccatagatccaccca 224
Query: 1315 atctctttcccccattctgttttatcctcata 1346
||||| | |||||||| || || ||||||||
Sbjct: 223 atctcagttccccattcagtcttgtcctcata 192
Score = 40.1 bits (20), Expect = 1.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1478 ttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | ||||||||||| |||||
Sbjct: 73 ttctccaagctcatttgagacataagaagtga 42
>gb|BG103164.1|BG103164 RHIZ2_18_H12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 373
Score = 93.7 bits (47), Expect = 9e-017
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 115 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 56
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatga 529
|| |||| |||||| ||||||||||| || ||||||||||||||| | |||||||
Sbjct: 55 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatga 1
>gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 93.7 bits (47), Expect = 9e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
|||||||||||||| ||| ||| |||| |||||||||||||| ||||| | |||||||
Sbjct: 406 ggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccagtgagaatatct 347
Query: 1288 tcagtaacagagccatatatccatccgatctctttcccccattctgttttatcctcata 1346
|| |||||||| ||||| |||||||||||||| | ||||| || ||||| ||||||||
Sbjct: 346 tctgtaacagaaccatagatccatccgatctcagttccccagtcagttttgtcctcata 288
>gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_67_A05_A012 3', mRNA sequence
Length = 539
Score = 93.7 bits (47), Expect = 9e-017
Identities = 110/131 (83%)
Strand = Plus / Minus
Query: 499 atggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagg 558
|||||||| ||||||||||||||||||||||| ||||| ||||| ||||| | |||||
Sbjct: 242 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaagtggaca 183
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||| | || ||||| |||||||| || || || |||||||| ||||| |||||
Sbjct: 182 atcacccaaaacgcgaagaagagcttcccaaaaagaggcccccatgactggtaaccacta 123
Query: 619 ttgatagcata 629
||||| |||||
Sbjct: 122 ttgatcgcata 112
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||| ||| |||||||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 56 atcaaaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcatc 1
>gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 647
Score = 91.7 bits (46), Expect = 3e-016
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||| |||||||| ||||| || || |||| |||||| || || ||||| |||||
Sbjct: 482 acccacaggagcgagaagatggaggccagcaggatggaccagacgatcacgatcgtcggc 423
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||| |||||||| ||||| ||||| || |||| ||||||||||
Sbjct: 422 gtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccag 363
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatga 605
| || ||||| ||||||||||| || |||||||||||
Sbjct: 362 aacgcgaagaagagcttcccgaagagaggaccccatga 325
Score = 79.8 bits (40), Expect = 1e-012
Identities = 121/148 (81%)
Strand = Plus / Minus
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||||||||| |||||| | |||||||| || || || || || | || ||||||
Sbjct: 188 gcctttgatgtgacggtgaagctcgtgtcgataccggcgaggaccttgagaaggccttgg 129
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 128 aacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttctccac 69
Query: 865 caatcctcaatgccaacaccactccatc 892
|| || || ||| | |||||||||||||
Sbjct: 68 cagtcatcgatggccacaccactccatc 41
>gb|CF072531.1|CF072531 FE1_3_B12.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_3_B12_A002 3', mRNA sequence
Length = 577
Score = 91.7 bits (46), Expect = 3e-016
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 114 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 55
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatg 528
|| |||| |||||| ||||||||||| || ||||||||||||||| | ||||||
Sbjct: 54 aggaggatggaccagacaatgacgattgttggtgtgcggttctgcctgcccatg 1
>gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 3', mRNA sequence
Length = 677
Score = 91.7 bits (46), Expect = 3e-016
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||| |||||||| ||||| || || |||| |||||| || || ||||| |||||
Sbjct: 196 acccacaggagcgagaagatggaggccagcaggatggaccagacgatcacgatcgtcggc 137
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||| |||||||| ||||| ||||| || |||| ||||||||||
Sbjct: 136 gtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccag 77
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatga 605
| || ||||| ||||||||||| || |||||||||||
Sbjct: 76 aacgcgaagaagagcttcccgaaaagaggaccccatga 39
>gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518887, DNA
sequence
Length = 574
Score = 87.7 bits (44), Expect = 5e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| || |||||||| || ||||| ||||| || || | || | ||||||
Sbjct: 203 ttcttgcaaaatggcacccattttctagcaaattctgcagtctctgcaagcgattcaaat 144
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| |||||||| || || ||||| | || || ||||| || |||
Sbjct: 143 gtgagcatagcagaaccatcatcagatacgtagcatgagatcttctcgacaggatagtcc 84
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
||||||||||| ||||| |||||||| |||| ||||| ||||| || || | |||||||
Sbjct: 83 acagcaagaatagacagcacagtgtttgcagtgattagtggaggctcttttaatggatcc 24
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 23 actgtactgacaaaga 8
>gb|BE918322.1|BE918322 OV1_2_A10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 100
Score = 87.7 bits (44), Expect = 5e-015
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 439 tcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacg 498
||||||||||||||||||| ||||| ||||| || || |||| |||||| |||||||||
Sbjct: 92 tcgatcttcacccacagcaaggagaagatggacgcgaggaggatggaccagacaatgacg 33
Query: 499 atggtcggtgtgcggttctgcttccccatgag 530
|| || ||||||||||||||| | ||||||||
Sbjct: 32 attgttggtgtgcggttctgcctgcccatgag 1
>gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 391
Score = 87.7 bits (44), Expect = 5e-015
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||||||||||||||||||||| || | | |||||||||||||| | || |||
Sbjct: 162 gcattcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgagaca 103
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaat 2122
|||||||| || ||||||||||| || ||| ||| | |||||||| ||||| | ||||
Sbjct: 102 taaacaaggcgaggcaactcatttccttccacatcacgaccaccactttggccaaggaat 43
Query: 2123 acttggatcattccnggatgatc 2145
|| || |||||||| ||||||||
Sbjct: 42 acctgaatcattccaggatgatc 20
Score = 61.9 bits (31), Expect = 3e-007
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
||||||||||||||||||||||||||| | | || ||||| | |||| ||||||||||
Sbjct: 279 ggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatca 220
Query: 1946 caatcca 1952
|||||||
Sbjct: 219 caatcca 213
>gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 477
Score = 87.7 bits (44), Expect = 5e-015
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||||||||||||||||||||| || | | |||||||||||||| | || |||
Sbjct: 162 gcattcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgagaca 103
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaat 2122
|||||||| || ||||||||||| || ||| ||| | |||||||| ||||| | ||||
Sbjct: 102 taaacaaggcgaggcaactcatttccttccacatcacgaccaccactttggccaaggaat 43
Query: 2123 acttggatcattccnggatgatc 2145
|| || |||||||| ||||||||
Sbjct: 42 acctgaatcattccaggatgatc 20
Score = 77.8 bits (39), Expect = 5e-012
Identities = 177/223 (79%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| | ||||||||||| ||||| | ||| ||||| || ||||||
Sbjct: 435 catccagtacccacatagatgggtccttgaataccatccaaacctttcatgttgatatca 376
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
|| ||||| | |||| |||||| ||||||||||| ||| ||||||||||| || ||
Sbjct: 375 aaaaagacgacattcctgtttgcgtatcgatcatgacggtcaataccatcaaacctctga 316
Query: 1850 ggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcc 1909
|| ||||| |||||||| |||| | || | ||||||||||||||||||||||||
Sbjct: 315 gggaactggacatagcacactttcttccccaccaaaggatccatcatgaaacacatagcc 256
Query: 1910 tctctaagagctttgctgctattgaagtagtgatcacaatcca 1952
||| | | || ||||| | |||| |||||||||||||||||
Sbjct: 255 tcttttatggccttgctattgttgatgtagtgatcacaatcca 213
>gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 348
Score = 87.7 bits (44), Expect = 5e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| || |||||||| || ||||| ||||| || || | || | ||||||
Sbjct: 256 ttcttgcaaaatggcacccattttctagcaaattctgcagtctctgcaagcgattcaaat 197
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| |||||||| || || ||||| | || || ||||| || |||
Sbjct: 196 gtgagcatagcagaaccatcatcagatacgtagcatgagatcttctcgacaggatagtcc 137
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
||||||||||| ||||| |||||||| |||| ||||| ||||| || || | |||||||
Sbjct: 136 acagcaagaatagacagcacagtgtttgcagtgattagtggaggctcttttaatggatcc 77
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 76 actgtactgacaaaga 61
>gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_60_F06_A007 3', mRNA sequence
Length = 579
Score = 87.7 bits (44), Expect = 5e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| |||||||||||||| ||||| ||||| | |||
Sbjct: 192 acgatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgc 133
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || ||||| |||||||||||||| ||
Sbjct: 132 acaatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccg 73
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| ||||| || | ||||| || | ||||||||||||
Sbjct: 72 ctgttgatcgcataggagataccagcaacaacaccaaccaggtt 29
>gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_G11_A012 3', mRNA sequence
Length = 616
Score = 87.7 bits (44), Expect = 5e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| |||||||||||||| ||||| ||||| | |||
Sbjct: 230 acgatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgc 171
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || ||||| |||||||||||||| ||
Sbjct: 170 acaatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccg 111
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| ||||| || | ||||| || | ||||||||||||
Sbjct: 110 ctgttgatcgcataggagataccagcaacaacaccaaccaggtt 67
Score = 42.1 bits (21), Expect = 0.28
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaa 725
|||| ||| |||||||||||||||| |||||||| |||||
Sbjct: 41 atcaaaagggttgtccacttgaacatgtacagctccgcaaa 1
>gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_23_E06_A010 3', mRNA sequence
Length = 633
Score = 87.7 bits (44), Expect = 5e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| |||||||||||||| ||||| ||||| | |||
Sbjct: 247 acgatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggtacaagtgc 188
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || ||||| |||||||||||||| ||
Sbjct: 187 acaatcacccagaaggcgaagaagagcttgccaaagagtgggccccatgattggtaaccg 128
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| ||||| || | ||||| || | ||||||||||||
Sbjct: 127 ctgttgatcgcataggagataccagcaacaacaccaaccaggtt 84
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||||||| |||||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 58 atcagaagggttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatc 3
>gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 777
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 567 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 508
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 507 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 448
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 447 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 388
Query: 610 ta 611
||
Sbjct: 387 ta 386
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 254 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 212
>gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10810478, DNA
sequence
Length = 638
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 402 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 461
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 462 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 521
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 522 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 581
Query: 610 ta 611
||
Sbjct: 582 ta 583
>gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500738, DNA
sequence
Length = 854
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 170 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 229
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 230 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 289
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 290 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 349
Query: 610 ta 611
||
Sbjct: 350 ta 351
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 483 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 525
>gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 601
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 89 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 148
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 149 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 208
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 209 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 268
Query: 610 ta 611
||
Sbjct: 269 ta 270
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 402 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 444
>gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 685
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 527 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 468
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 467 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 408
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 407 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 348
Query: 610 ta 611
||
Sbjct: 347 ta 346
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 214 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 172
>gb|BF420934.1|BF420934 FM1_5_B03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 259
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 209 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 150
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | ||||||| |||||||| ||||| ||||| ||||||
Sbjct: 149 atgacaacaatggtgggcgtcctgttctgccggcccatgagccccttgaggaacgggtag 90
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 89 aggtggacgatgacccagaatgcgaagaagagcttgccgaagaggggtccccatgactgg 30
Query: 610 ta 611
||
Sbjct: 29 ta 28
>gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C04_A002 3', mRNA sequence
Length = 553
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 327 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 268
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 267 aagacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 208
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 207 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 148
Query: 610 ta 611
||
Sbjct: 147 ta 146
>gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_20_E12_A002 5', mRNA sequence
Length = 436
Score = 83.8 bits (42), Expect = 8e-014
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 411 ccaatgacccagaactgctcattcctccaccaatcatcaattccaacaccactccatc 354
>gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_27_E11_A002 3', mRNA sequence
Length = 553
Score = 83.8 bits (42), Expect = 8e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 218 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 159
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 158 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 99
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
||||||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||
Sbjct: 98 aggtggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactgg 39
Query: 610 ta 611
||
Sbjct: 38 ta 37
>gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_B05_A002 5', mRNA sequence
Length = 728
Score = 83.8 bits (42), Expect = 8e-014
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 389 ccaatgacccagaactgctcattcctccaccaatcatcaattccaacaccactccatc 332
Score = 46.1 bits (23), Expect = 0.018
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatga 605
|||||||| | ||||||||| |||||||| || || |||||||||||
Sbjct: 662 atcacccaaaatgcaaagaagagcttcccaaagaggggaccccatga 616
>gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 412
Score = 81.8 bits (41), Expect = 3e-013
Identities = 146/181 (80%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| ||||||||||| || ||||| | |||| |||||| |||||||| || || ||
Sbjct: 323 acccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgttggc 264
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| | ||||||| |||| | |||||||| ||||| ||||| || |||| ||||||||
Sbjct: 263 gttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacccaa 204
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| ||||||||| ||||||||||| || || |||||||||| || ||| ||||||| |||
Sbjct: 203 aatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgattgca 144
Query: 628 t 628
|
Sbjct: 143 t 143
>gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 81.8 bits (41), Expect = 3e-013
Identities = 146/181 (80%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| ||||||||||| || ||||| | |||| |||||| |||||||| || || ||
Sbjct: 311 acccagagcagcgagaagattgaagccaagaggatggaccagacaatgacaattgttggc 252
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| | ||||||| |||| | |||||||| ||||| ||||| || |||| ||||||||
Sbjct: 251 gttctgttctgcctcccaaccagacccttgaggaatgggtaaagatggacaatcacccaa 192
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| ||||||||| ||||||||||| || || |||||||||| || ||| ||||||| |||
Sbjct: 191 aatgcaaagaagagcttcccgaacaggggcccccatgattcatatccattgttgattgca 132
Query: 628 t 628
|
Sbjct: 131 t 131
>gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191609, DNA
sequence
Length = 289
Score = 79.8 bits (40), Expect = 1e-012
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 795 gagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctc 854
|||||| ||||| || ||||| | ||| ||||| | |||||||| ||||||||||||||
Sbjct: 245 gagaccctggaagacggcaaataaatgcgcagaaataccaccaataacccaaaactgctc 186
Query: 855 atttctccaccaatcctcaatgccaacaccactcca 890
|| |||||||| || ||||||||||||||||||||
Sbjct: 185 gttcctccaccattcatcaatgccaacaccactcca 150
>gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f112l18, DNA
sequence
Length = 427
Score = 77.8 bits (39), Expect = 5e-012
Identities = 144/179 (80%)
Strand = Plus / Minus
Query: 433 aaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaaaca 492
|||||||||||| | ||||| ||||| ||||| ||||| || || || |||||||| |
Sbjct: 427 aaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatg 368
Query: 493 atgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagagg 552
| || ||||| || || | |||||| ||||||||| ||||| ||||| |||||||||
Sbjct: 367 acaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtagagg 308
Query: 553 tggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggta 611
|||| ||| ||||||| ||| ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 307 tggacgatgacccagaatgcgaagaagagcttgccgaagagcgggccccatgactggta 249
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 117 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 75
>gb|AW283377.1|AW283377 LG1_223_D12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 77.8 bits (39), Expect = 5e-012
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| ||||||
Sbjct: 304 atgaaggggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccag 245
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || ||||||||| ||||||| || ||||| ||||| |||||
Sbjct: 244 agcacgacgatggtgggcgtccggttctgcctccccatcaggcccttgaggaacgggtac 185
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 184 aggtggacgatgacccaga 166
>gb|BG947765.1|BG947765 IP1_8_G12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 77.8 bits (39), Expect = 5e-012
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| ||||||
Sbjct: 319 atgaaggggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccag 260
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || ||||||||| ||||||| || ||||| ||||| |||||
Sbjct: 259 agcacgacgatggtgggcgtccggttctgcctccccatcaggcccttgaggaacgggtac 200
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 199 aggtggacgatgacccaga 181
>gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 597
Score = 77.8 bits (39), Expect = 5e-012
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| ||||||
Sbjct: 597 atgaaggggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccag 538
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || ||||||||| ||||||| || ||||| ||||| |||||
Sbjct: 537 agcacgacgatggtgggcgtccggttctgcctccccatcaggcccttgaggaacgggtac 478
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 477 aggtggacgatgacccaga 459
>gb|BI074550.1|BI074550 IP1_16_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 599
Score = 77.8 bits (39), Expect = 5e-012
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| ||||||
Sbjct: 321 atgaaggggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccag 262
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || ||||||||| ||||||| || ||||| ||||| |||||
Sbjct: 261 agcacgacgatggtgggcgtccggttctgcctccccatcaggcccttgaggaacgggtac 202
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 201 aggtggacgatgacccaga 183
>gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214849, DNA
sequence
Length = 686
Score = 75.8 bits (38), Expect = 2e-011
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 522 ccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacag 581
||||||||| ||||| ||||| ||||||||||||| ||| ||||||| ||| ||||| ||
Sbjct: 681 ccccatgagccccttgaggaacgggtagaggtggacgatgacccagaatgcgaagaagag 622
Query: 582 cttcccgaatagtggaccccatgattggta 611
||| ||||| || || |||||||| |||||
Sbjct: 621 cttgccgaagagcgggccccatgactggta 592
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 460 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 418
>gb|CN128754.1|CN128754 RHOH1_31_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_H09_A002 3', mRNA sequence
Length = 705
Score = 75.8 bits (38), Expect = 2e-011
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||| ||| |||||||||||||||| |||||||| ||||| ||||| || ||||| |
Sbjct: 140 atcaaaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatctgag 81
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||||| |||||||| || || ||||| || | |||||| |||
Sbjct: 80 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttgaggagaccctgg 21
Query: 805 aa 806
||
Sbjct: 20 aa 19
Score = 60.0 bits (30), Expect = 1e-006
Identities = 138/174 (79%)
Strand = Plus / Minus
Query: 486 ccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagg 545
|||||||| ||||||||||| |||||||| ||| ||||||||||| || ||||| ||
Sbjct: 339 ccaaacaaccacgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgg 280
Query: 546 gtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatga 605
||| | ||| | |||||||||| || || || ||||| || || || || ||||||||
Sbjct: 279 gtacaagtgcacaatcacccagaaggcgaaaaaaagcttgccaaaaagcgggccccatga 220
Query: 606 ttggtagccactgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||| || |||||||| || || || | ||||| || | ||||||||||||
Sbjct: 219 ttggtaaccgctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 166
>gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135797, DNA
sequence
Length = 540
Score = 73.8 bits (37), Expect = 8e-011
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||||||||||||||| || | || || ||||||||||| |||||||||||
Sbjct: 495 ccttggaacacagcaaagaggtgcgaggacacacctccaatgacccagaactgctcattc 436
Query: 859 ctccaccaatcctcaatgccaacaccactccat 891
||||||||||| ||||| ||||||||| |||||
Sbjct: 435 ctccaccaatcatcaattccaacaccagtccat 403
>gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 226
Score = 71.9 bits (36), Expect = 3e-010
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| || |||||||||||||| ||||| ||| |||||||| || ||
Sbjct: 120 gttcccacataaactggcccttgaatgccatcaagacctctcaagttaatatcgaaaaac 61
Query: 1796 acaatgttccggtttgcatatcgatcat 1823
||| |||||| |||||||||||| ||||
Sbjct: 60 acagtgttcctgtttgcatatcggtcat 33
>gb|AW282791.1|AW282791 LG1_290_D05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 69.9 bits (35), Expect = 1e-009
Identities = 149/187 (79%)
Strand = Plus / Minus
Query: 436 gggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaaacaatg 495
||||||||||| ||||| || || ||||| | ||| || || ||||||||||| | |
Sbjct: 253 gggtcgatcttgacccagaggagggagaagacggaggcgaggaggacggaccagagcacc 194
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
|||||||| || ||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 193 acgatggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacaggtgc 134
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| ||||||||| || || ||||||| ||| || || || || ||||| || | ||||||
Sbjct: 133 atgatcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtagccg 74
Query: 616 ctgttga 622
|||||||
Sbjct: 73 ctgttga 67
>gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 207
Score = 69.9 bits (35), Expect = 1e-009
Identities = 107/131 (81%)
Strand = Plus / Minus
Query: 2434 catagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagc 2493
|||||| ||||| |||||||| || || ||||| | || || ||||| || ||||||||
Sbjct: 184 catagcagaaccatcatcagatacgtagcatgagatcttctcgacaggatagtccacagc 125
Query: 2494 aagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgt 2553
|||||| ||||| |||||||| |||| ||||| ||||| | || | ||||||||||||
Sbjct: 124 aagaatagacagcacagtgtttgcagtcattagtggaggctgttttaatggatccactgt 65
Query: 2554 actaacaaaga 2564
||| |||||||
Sbjct: 64 actgacaaaga 54
>gb|BF587843.1|BF587843 FM1_33_F03.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 490
Score = 69.9 bits (35), Expect = 1e-009
Identities = 149/187 (79%)
Strand = Plus / Minus
Query: 436 gggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaaacaatg 495
||||||||||| ||||| || || ||||| | ||| || || ||||||||||| | |
Sbjct: 193 gggtcgatcttgacccagaggagggagaagacggaggcgaggaggacggaccagagcacc 134
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
|||||||| || ||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 133 acgatggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacaggtgc 74
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| ||||||||| || || ||||||| ||| || || || || ||||| || | ||||||
Sbjct: 73 atgatcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtagccg 14
Query: 616 ctgttga 622
|||||||
Sbjct: 13 ctgttga 7
>gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 285
Score = 69.9 bits (35), Expect = 1e-009
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||| ||||||||||||| ||||||||| ||||| || ||||| ||||| || |||||
Sbjct: 89 atgcattttgaaaccagttagaatatcttctgtaactgatccataaatccagccaatctc 30
Query: 1320 tttcccccattctgt 1334
||| ||||| |||||
Sbjct: 29 ttttccccagtctgt 15
>gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 69.9 bits (35), Expect = 1e-009
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 1712 gcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctaga 1771
|||||||||| |||||| || || |||| |||||||| || | ||| |||||||| ||
Sbjct: 330 gcctgcctatagaaacaacaaccagttctgacataaactgggcattggatgccatcaagt 271
Query: 1772 cccttcatattaatatcaaagaagacaatgttccggtttgcatatcgatca 1822
|| |||||||||| ||||||||| |||| ||||| || ||||||||||||
Sbjct: 270 cctttcatattaacatcaaagaacacaacgttcctattggcatatcgatca 220
Score = 46.1 bits (23), Expect = 0.018
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 1937 tagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacgcga 1996
||||||||||| || | |||||||| |||| | |||| ||||| ||||| || || ||
Sbjct: 105 tagtgatcacagtcaagattaagaatgtaaggagcatttgtcagaacagcggacactcgg 46
Query: 1997 atcaaagcattcatggcaccagccttcttgtggtg 2031
| || ||||||||| || || ||||||||||||||
Sbjct: 45 accagagcattcatagcccctgccttcttgtggtg 11
>gb|CF072959.1|CF072959 FE1_27_D01.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_27_D01_A002 3', mRNA sequence
Length = 574
Score = 69.9 bits (35), Expect = 1e-009
Identities = 113/139 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| ||||||
Sbjct: 315 atgaaggggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccag 256
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || ||||||||| ||||||| || |||| ||||| |||||
Sbjct: 255 agcacgacgatggtgggcgtccggttctgcctccccatcagggccttgaggaacgggtac 196
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 195 aggtggacgatgacccaga 177
>gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_C06_A002 5', mRNA sequence
Length = 752
Score = 69.9 bits (35), Expect = 1e-009
Identities = 176/223 (78%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| | ||||||||||| || || | ||| ||||| || ||||||
Sbjct: 244 catccagtacccacatagatgggtccttgaataccgtccaaacctttcatgttgatatca 185
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
|| ||||| | ||||| ||||| ||||||||||| ||| ||||||||||| || ||
Sbjct: 184 aaaaagacgacgttcctgtttgtgtatcgatcatgacggtcaataccatcaaacctctga 125
Query: 1850 ggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcc 1909
|| ||||| |||||||| |||| | || | ||||||||||||||||||||||||
Sbjct: 124 gggaactggacatagcacactttcttccccaccaaaggatccatcatgaaacacatagcc 65
Query: 1910 tctctaagagctttgctgctattgaagtagtgatcacaatcca 1952
||| | | || ||||| | |||| |||||||||||||||||
Sbjct: 64 tcttttatggccttgctattgttgatgtagtgatcacaatcca 22
Score = 40.1 bits (20), Expect = 1.1
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| || ||||| || ||||| || |||| || ||||| ||||| || ||||||
Sbjct: 730 tgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaatctct 671
Query: 1321 ttccccca 1328
||||||||
Sbjct: 670 ttccccca 663
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttag 1384
||||||||||||||||||||
Sbjct: 631 acatgtatagcttcctttag 612
>gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 67.9 bits (34), Expect = 5e-009
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 522 ccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacag 581
||||||||| ||||| ||||| ||||||||||||| ||| ||||| | ||| ||||| ||
Sbjct: 473 ccccatgagccccttgaggaacgggtagaggtggacgatgacccataatgcgaagaagag 414
Query: 582 cttcccgaatagtggaccccatgattggta 611
||| ||||| || || |||||||| |||||
Sbjct: 413 cttgccgaagagcgggccccatgactggta 384
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 252 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 210
>gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 67.9 bits (34), Expect = 5e-009
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
||||||||||| || ||||||||||| || || ||||||||||| |||||||| |||
Sbjct: 546 ccttggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgttt 487
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 486 ctccaccagtcatcgatggccacaccactccatc 453
Score = 40.1 bits (20), Expect = 1.1
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| || ||||| || ||||| || |||| || ||||| ||||| || ||||||
Sbjct: 84 tgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaatctct 25
Query: 1321 ttccccca 1328
||||||||
Sbjct: 24 ttccccca 17
>gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 558
Score = 65.9 bits (33), Expect = 2e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||| |||||||| ||||| || || |||| |||||| || || ||||| |||||
Sbjct: 135 acccacaggagcgagaagatggaggccagcaggatggaccagacgatcacgatcgtcggc 76
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||| |||||||| ||||| ||||| || |||| ||||||||||
Sbjct: 75 gtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccag 16
Query: 568 a 568
|
Sbjct: 15 a 15
>gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 574
Score = 65.9 bits (33), Expect = 2e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||| |||||||| ||||| || || |||| |||||| || || ||||| |||||
Sbjct: 124 acccacaggagcgagaagatggaggccagcaggagggaccagacgatcacgatcgtcggc 65
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||| |||||||| ||||| ||||| || |||| ||||||||||
Sbjct: 64 gtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccag 5
Query: 568 a 568
|
Sbjct: 4 a 4
>gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 476
Score = 65.9 bits (33), Expect = 2e-008
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||| |||||||| ||||| || || |||| |||||| || || ||||| |||||
Sbjct: 134 acccacaggagcgagaagatggaggccagcaggatggaccagacgatcacgatcgtcggc 75
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||| |||||||| ||||| ||||| || |||| ||||||||||
Sbjct: 74 gtccggttctgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccag 15
Query: 568 a 568
|
Sbjct: 14 a 14
>gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_F12_A002 5', mRNA sequence
Length = 704
Score = 65.9 bits (33), Expect = 2e-008
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 529 agacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccg 588
|||||||| ||||| ||||| || |||| ||||||||||| || ||||| |||||||||
Sbjct: 684 agacccttgaggaacgggtacagatggatgatcacccagaacgcgaagaagagcttcccg 625
Query: 589 aatagtggaccccatga 605
|| || |||||||||||
Sbjct: 624 aagagaggaccccatga 608
Score = 48.1 bits (24), Expect = 0.005
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||||||||| |||||| | |||||||| || || || || || | || ||||||
Sbjct: 471 gcctttgatgtgacggtgaagctcgtgtcgataccggcgaggaccttgagaaggccttgg 412
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttct 860
||||| | ||||||||||| || || ||||||||||| |||||||| |||||
Sbjct: 411 aacaccgtgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttct 356
>gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483110, DNA
sequence
Length = 706
Score = 63.9 bits (32), Expect = 8e-008
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 239 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 298
Query: 2713 tacaagccacaa 2724
|| ||||||||
Sbjct: 299 tatgagccacaa 310
>gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 63.9 bits (32), Expect = 8e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| ||||||||||| || ||||| ||||| | |||
Sbjct: 248 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgc 189
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || || || |||||||||||||| ||
Sbjct: 188 acaatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccg 129
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| || || || | ||||| || | ||||||||||||
Sbjct: 128 ctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 85
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||||||| |||||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 59 atcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatc 4
>gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_19_D03_A002 3', mRNA sequence
Length = 615
Score = 63.9 bits (32), Expect = 8e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| ||||||||||| || ||||| ||||| | |||
Sbjct: 257 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgc 198
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || || || |||||||||||||| ||
Sbjct: 197 acaatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattggtaaccg 138
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| || || || | ||||| || | ||||||||||||
Sbjct: 137 ctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 94
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||||||| |||||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 68 atcagaagcgttgtccacttgaacatgtacagctccgcaaagtcaccgtcttcatc 13
>gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H04_A002 5', mRNA sequence
Length = 723
Score = 63.9 bits (32), Expect = 8e-008
Identities = 155/196 (79%)
Strand = Plus / Minus
Query: 1757 tgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatat 1816
||||| ||||| | ||| |||||||| ||||| || ||||||| |||| ||| ||||||
Sbjct: 305 tgaataccatccaaacctttcatattgatatcgaaaaagacaacattcctgttagcatat 246
Query: 1817 cgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttcctt 1876
|| ||||| || | |||||||||||||| || ||||| ||||||||| ||| ||
Sbjct: 245 cggtcatggcgatcagtcccatcaaatctttgagggaactgtacatagcaaaccttcttt 186
Query: 1877 cctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattgaag 1936
|||||| || |||||||| |||||||| || || | | ||| |||||| | |||| |
Sbjct: 185 cctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatg 126
Query: 1937 tagtgatcacaatcca 1952
||||||||||||||||
Sbjct: 125 tagtgatcacaatcca 110
>gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152044, DNA
sequence
Length = 606
Score = 61.9 bits (31), Expect = 3e-007
Identities = 145/183 (79%)
Strand = Plus / Plus
Query: 440 cgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacga 499
||||||| ||||| || || ||||| | ||| || || ||||||||||| | | ||||
Sbjct: 1 cgatcttgacccagaggagggagaagacggaggcgaggaggacggaccagagcaccacga 60
Query: 500 tggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggagga 559
|||| || ||||||||||| |||||||||||||| ||||| ||||| ||||| | ||
Sbjct: 61 tggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacaggtgcatga 120
Query: 560 tcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgt 619
||||||| || || ||||||| ||| || || || || ||||| || | |||||| ||||
Sbjct: 121 tcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtagccgctgt 180
Query: 620 tga 622
|||
Sbjct: 181 tga 183
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||||| ||||||||
Sbjct: 258 gtccacttgaacacgtacagctc 280
>gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203928, DNA
sequence
Length = 714
Score = 61.9 bits (31), Expect = 3e-007
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
|||||||| || ||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 54 acgatggtgggcgtgcggttctgtcggcccatgagacccttgaggaacgggtacaggtgc 113
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| ||||||||| || || ||||||| ||| || || || || ||||| || | ||||||
Sbjct: 114 atgatcacccacatggcgaagaacaccttgccaaagagagggccccaggactcgtagccg 173
Query: 616 ctgttga 622
|||||||
Sbjct: 174 ctgttga 180
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||||| ||||||||
Sbjct: 255 gtccacttgaacacgtacagctc 277
>gb|CX608205.1|CX608205 ANR1_37_F12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_F12_A002 3', mRNA sequence
Length = 528
Score = 61.9 bits (31), Expect = 3e-007
Identities = 112/139 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | |||||||| ||||| || || |||| |||||||
Sbjct: 245 atgaaggggtcgatcctgacccaaacgagcgagaagatggaggcgaggaggatggaccaa 186
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | |||||||| || || ||| ||||| ||||||| || |||| ||||| |||||
Sbjct: 185 agcacgacgatggggggcgtccgggtctgcctccccatcagggccttgaggaacgggtac 126
Query: 550 aggtggaggatcacccaga 568
||||||| ||| |||||||
Sbjct: 125 aggtggacgatgacccaga 107
>gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 418
Score = 60.0 bits (30), Expect = 1e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 412 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 353
Query: 2713 ta 2714
||
Sbjct: 352 ta 351
>gb|BG053525.1|BG053525 RHIZ2_10_C07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 222
Score = 60.0 bits (30), Expect = 1e-006
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 352 ttattcagcaggcagttcggatcatttcagcagtttacaccacactgcccacgggaaa 409
|||| ||||||||||||| ||||| |||||||||||| || |||||||| |||||||
Sbjct: 65 ttatccagcaggcagttcagatcaaatcagcagtttacgccgcactgcccccgggaaa 8
Score = 38.2 bits (19), Expect = 4.4
Identities = 48/55 (87%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 194 ataagtagcacgacataagttgacaaagtttcatgctgcccacccc-aaatgcag 247
||||||| |||||||||| ||||||| |||| | ||||||||||| ||||||||
Sbjct: 222 ataagtaacacgacataacttgacaa-gttttgtactgcccacccccaaatgcag 169
>gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 60.0 bits (30), Expect = 1e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 81 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 22
Query: 2713 ta 2714
||
Sbjct: 21 ta 20
Score = 54.0 bits (27), Expect = 7e-005
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || ||||||||||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 362 ttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaacgta 303
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||||||||| || || || || ||||| || ||||||||
Sbjct: 302 agcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccacg 243
Query: 2492 gcaagaatggacaggacagtgtt 2514
| ||| ||||| |||||||||||
Sbjct: 242 gaaaggatggaaaggacagtgtt 220
>gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 473
Score = 60.0 bits (30), Expect = 1e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 439 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 380
Query: 2713 ta 2714
||
Sbjct: 379 ta 378
>gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 60.0 bits (30), Expect = 1e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 72 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 13
Query: 2713 ta 2714
||
Sbjct: 12 ta 11
Score = 54.0 bits (27), Expect = 7e-005
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || ||||||||||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 353 ttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaacgta 294
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||||||||| || || || || ||||| || ||||||||
Sbjct: 293 agcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccacg 234
Query: 2492 gcaagaatggacaggacagtgtt 2514
| ||| ||||| |||||||||||
Sbjct: 233 gaaaggatggaaaggacagtgtt 211
>gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 580
Score = 60.0 bits (30), Expect = 1e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||||||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 72 ccactttgggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 13
Query: 2713 ta 2714
||
Sbjct: 12 ta 11
Score = 54.0 bits (27), Expect = 7e-005
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || ||||||||||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 353 ttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaacgta 294
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||||||||| || || || || ||||| || ||||||||
Sbjct: 293 agcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccacg 234
Query: 2492 gcaagaatggacaggacagtgtt 2514
| ||| ||||| |||||||||||
Sbjct: 233 gaaaggatggaaaggacagtgtt 211
>gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_27_H08_A002 3', mRNA sequence
Length = 783
Score = 60.0 bits (30), Expect = 1e-006
Identities = 257/330 (77%), Gaps = 2/330 (0%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaa-acagcatcctgttcccacataaacaggtcc 1755
||||||||||| || |||||||| |||| ||| |||||||| || || |||| || ||
Sbjct: 640 tcatagccatataatgcctgcctcctgaagaca-catcctgtaccaacgtaaatggggcc 582
Query: 1756 ttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcata 1815
||| || ||||| | ||| ||||| || ||||| || ||||||| || | ||| |||||
Sbjct: 581 ttggataccatccaaacctttcatgttgatatcgaaaaagacaacatttctgttagcata 522
Query: 1816 tcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttcct 1875
||||||||| || || ||||| |||||||| |||||||| ||||||||| |||| |
Sbjct: 521 tcgatcatgacgatcaatcccatcgaatctttgaggaaactgcacatagcaaactttctt 462
Query: 1876 tcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattgaa 1935
||| || ||||||||||| |||||||| || || | | ||| || || ||||||
Sbjct: 461 tccaagcaaaggatccatcataaaacacattgcttcctttatagccttactattattgat 402
Query: 1936 gtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacgcg 1995
||||||||||||||||| || || | ||||| |||| || || ||||| || || ||
Sbjct: 401 gtagtgatcacaatccaagttcagcaaataaggtgcattagttagtacagcagagactcg 342
Query: 1996 aatcaaagcattcatggcaccagccttctt 2025
| ||| |||||||| ||||||||||||||
Sbjct: 341 gaccaatgcattcatagcaccagccttctt 312
>gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 154
Score = 58.0 bits (29), Expect = 5e-006
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 1742 acataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatg 1801
|||||||| || | ||| |||||||| || || |||||||||| ||||||||| |||| |
Sbjct: 153 acataaactgggctttggatgccatcaagtcctttcatattaacatcaaagaacacaacg 94
Query: 1802 ttccggtttgcatatcgatca 1822
|||| || ||||||||||||
Sbjct: 93 ttcctattggcatatcgatca 73
>gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_F01_A002 5', mRNA sequence
Length = 591
Score = 58.0 bits (29), Expect = 5e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2652 accactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacag 2711
||||||||||||| ||||| |||| |||||||| |||||||| | |||||| ||||| |
Sbjct: 374 accactttgggaattgatcaagaatccaagacatggcaaaccagatttcacagataaccg 315
Query: 2712 atacaagccacaa 2724
||| ||||||||
Sbjct: 314 atatgagccacaa 302
Score = 54.0 bits (27), Expect = 7e-005
Identities = 105/131 (80%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||||||||| || || || || |||||||| |||||||| ||||| || |||||
Sbjct: 579 tcatcagaaacatagcaagaaaccttatcaacaggataatccaccgcaaggatagacaga 520
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagaca 2566
||||| || | || | | |||||||||||| | ||||| |||||||| ||||| | |
Sbjct: 519 acagtatttgctgtgaccaaaggaggttcctttaacggatcaactgtactgacaaaaaaa 460
Query: 2567 tcgattggagc 2577
|| ||||||||
Sbjct: 459 tcaattggagc 449
>gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_15_D07_A011 3', mRNA sequence
Length = 393
Score = 58.0 bits (29), Expect = 5e-006
Identities = 143/181 (79%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| |||||||| || || ||||| | |||| |||||| |||||||| || || ||
Sbjct: 187 acccaaagcagcgaaaagattgaagccaagaggatggaccagacaatgacaattgttggc 128
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| | ||||||| |||| | | |||||| ||||| ||||| || |||| ||||||||
Sbjct: 127 gttctgttctgcctcccaaccaaacccttgaggaatgggtaaagatggacaatcacccaa 68
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagca 627
| |||||| || ||||||||||| || || |||||||||| || ||| ||||||| |||
Sbjct: 67 aatgcaaaaaaaagcttcccgaacagggggccccatgattcatatccattgttgattgca 8
Query: 628 t 628
|
Sbjct: 7 t 7
>gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483110, DNA
sequence
Length = 643
Score = 56.0 bits (28), Expect = 2e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 2653 ccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacaga 2712
|||||| ||||||||||| |||| ||| |||| |||||||| | |||||| ||||||||
Sbjct: 634 ccacttggggaactgatcaagaatccaggacatggcaaaccagatttcacagataacaga 575
Query: 2713 tacaagccacaa 2724
|| ||||||||
Sbjct: 574 tatgagccacaa 563
>gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 506
Score = 56.0 bits (28), Expect = 2e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaa 1791
|||||||||||||| |||||||| |||||||| ||||| ||| |||||||||||
Sbjct: 77 gttcccacataaactggtccttggatgccatcaagacctctcaagttaatatcaaa 22
Score = 40.1 bits (20), Expect = 1.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1478 ttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | ||||||||||| |||||
Sbjct: 341 ttctccaagctcatttgagacataagaagtga 310
>gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 616
Score = 56.0 bits (28), Expect = 2e-005
Identities = 130/164 (79%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtgg 555
||||||||||| |||||||| ||| ||||||||||| || ||||| ||||| | |||
Sbjct: 232 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggtacaagtgc 173
Query: 556 aggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagcca 615
| |||||||||| || ||||| ||||| || || || || ||||||||||| || ||
Sbjct: 172 acaatcacccagaaggcgaagaagagcttgccaaagagcgggccccatgattgataaccg 113
Query: 616 ctgttgatagcatacgacactccagccactataccaaccaggtt 659
|||||||| || || || | ||||| || | ||||||||||||
Sbjct: 112 ctgttgatcgcgtaggagataccagcaacaacaccaaccaggtt 69
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaa 725
|||||||| |||||||||||||||| |||||||| |||||
Sbjct: 43 atcagaagcgttgtccacttgaacatgtacagctccgcaaa 3
>gb|CL161384.1|CL161384 104_352_10805682_116_31827_354 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805682, DNA
sequence
Length = 693
Score = 54.0 bits (27), Expect = 7e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 188 ttcatggcgccggccttcttgtggtgctggaagcc 222
>gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215917, DNA
sequence
Length = 668
Score = 54.0 bits (27), Expect = 7e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 285 ttcatggcgccggccttcttgtggtgctggaagcc 251
>gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f012e11, DNA
sequence
Length = 846
Score = 54.0 bits (27), Expect = 7e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
|||||| ||||||||||||| ||||||||| ||||| || ||||| |||||
Sbjct: 99 atgcattttgaaaccagttagaatatcttctgtaactgatccataaatcca 149
>gb|CW420002.1|CW420002 fsbb001f126b21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f126b21, DNA
sequence
Length = 591
Score = 54.0 bits (27), Expect = 7e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 46 ttcatggcgccggccttcttgtggtgctggaagcc 80
>gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 468
Score = 54.0 bits (27), Expect = 7e-005
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 2060 acataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaag 2119
||||||||||| || ||||||||||| || ||| ||| | |||||||| ||||| | |
Sbjct: 450 acataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttggccaagg 391
Query: 2120 aatacttggatcattccnggatgatc 2145
||||| || |||||||| ||||||||
Sbjct: 390 aatacctgaatcattccaggatgatc 365
Score = 38.2 bits (19), Expect = 4.4
Identities = 94/119 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || ||||||||||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 138 ttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaacgta 79
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccac 2490
| ||| || | ||| |||||||||||||| || || || || ||||| || ||||||||
Sbjct: 78 agcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccggataatccac 20
>gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 205
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||||| | |||||||| |||
Sbjct: 188 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagccaatgcttcaaatgtc 129
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccac 2490
| ||| || | ||| |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 128 agcatggcagcaccatcatcagaaacatagcatgaaaccttatcaactggataatccac 70
>gb|BI099525.1|BI099525 IP1_43_D01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 203
Score = 54.0 bits (27), Expect = 7e-005
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 128 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggaccag 69
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | || ||||| || || | |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 68 atgacaacaatggtgggcgtcctgttctggcgccccatgagccccttgaggaacgggtag 9
Query: 550 aggtgga 556
|||||||
Sbjct: 8 aggtgga 2
>gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_18_C04_A002 5', mRNA sequence
Length = 627
Score = 54.0 bits (27), Expect = 7e-005
Identities = 96/119 (80%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | || ||||| | |||||||| |||
Sbjct: 607 ttgcagaaaggaacccatttctttgcaaattcagatgtctcagacaatgcttcaaatgtc 548
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccac 2490
| ||| || | ||| |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 547 agcatggcagcaccatcatcagaaacatagcatgaaaccttatcaactggataatccac 489
>gb|BF585894.1|BF585894 FM1_25_H01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 461
Score = 52.0 bits (26), Expect = 3e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || |||||||| |||||||| | ||||| ||||| ||
Sbjct: 94 ttctgtgtcggggagatgaaaggatcgatcttgacccacaggaaggagaagatggacgcg 35
Query: 475 agaaggacggaccaaacaatgacgat 500
|| |||| |||||| |||||||||||
Sbjct: 34 aggaggatggaccagacaatgacgat 9
>gb|BG465855.1|BG465855 RHIZ2_45_D07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 461
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggta 548
||||||||||| |||||||| ||| |||||||||||||| ||||| |||||
Sbjct: 74 acgatggtcggggtgcggttttgccgacccatgagacccttgaggaatgggta 22
>gb|CF073760.1|CF073760 FE1_12_E05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_12_E05_A002 3', mRNA sequence
Length = 477
Score = 50.1 bits (25), Expect = 0.001
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| || ||||| ||||| || ||||||||||||||||||| ||||| ||||| ||
Sbjct: 73 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatggacgcg 14
Query: 475 agaaggacggacc 487
|| |||| |||||
Sbjct: 13 aggaggatggacc 1
>gb|BG050513.1|BG050513 FM1_70_D01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 381
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatgga 470
||||| || ||||| ||||| || ||||||||||||||||||| ||||| |||||
Sbjct: 68 ttctgtgtcggggagatgaaaggatcgatcttcacccacagcaaggagaagatgga 13
>gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890237, DNA
sequence
Length = 578
Score = 46.1 bits (23), Expect = 0.018
Identities = 131/167 (78%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||| ||||||| |||| ||| |||||||| ||||| || || |||||||||||
Sbjct: 321 atcaaaaaagacaacattcctgttagcatatcggtcatggcgatcaatcccatcaaatct 380
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
||| || ||||| ||||| ||| ||| |||||||| || |||||||| ||||||||
Sbjct: 381 ttgagggaactgtacataacaaaccttctttcctagtaaagggtccatcataaaacacat 440
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatcca 1952
|| || | | ||| |||||| | |||| ||| |||||||||||||
Sbjct: 441 tgcttccattatagccttgctgttgttgatgtactgatcacaatcca 487
>gb|CW315000.1|CW315000 104_805_11472128_116_35818_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472128, DNA
sequence
Length = 651
Score = 46.1 bits (23), Expect = 0.018
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggacca 488
||||||||||||||| | ||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 592 atgaaggggtcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 650
>gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472644, DNA
sequence
Length = 726
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 629 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 587
>gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f241j14, DNA
sequence
Length = 573
Score = 46.1 bits (23), Expect = 0.018
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatc 869
||||| |||||||| || |||||||||||||||||
Sbjct: 376 ccaataacccaaaattgttcatttctccaccaatc 410
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||| ||||||||||
Sbjct: 241 gtccacttgaactcatacagctc 263
>gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 46.1 bits (23), Expect = 0.018
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatga 605
|||||||| | ||||||||| |||||||| || || |||||||||||
Sbjct: 114 atcacccaaaatgcaaagaagagcttcccaaagaggggaccccatga 68
>gb|BG947491.1|BG947491 IP1_5_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 426
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagca 457
||||| || ||||| ||||| || |||||||||||||||||||
Sbjct: 47 ttctgtgtcggggagatgaaaggatcgatcttcacccacagca 5
>gb|BI075512.1|BI075512 IP1_21_D10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 469
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagca 457
||||| || ||||| ||||| || |||||||||||||||||||
Sbjct: 54 ttctgtgtcggggagatgaaaggatcgatcttcacccacagca 12
>gb|BI076267.1|BI076267 IP1_25_A08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 428
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagca 457
||||| || ||||| ||||| || |||||||||||||||||||
Sbjct: 49 ttctgtgtcggggagatgaaaggatcgatcttcacccacagca 7
>gb|BI211854.1|BI211854 IP1_62_B12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagca 457
||||| || ||||| ||||| || |||||||||||||||||||
Sbjct: 43 ttctgtgtcggggagatgaaaggatcgatcttcacccacagca 1
>gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_H04_A002 3', mRNA sequence
Length = 572
Score = 46.1 bits (23), Expect = 0.018
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
|||||||||||||| || ||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 103 ccatcaaatctttgagggaactgtacatagcaaaccttctttcctagtaaagggtccatc 44
Query: 1895 atgaaacacat 1905
|| ||||||||
Sbjct: 43 ataaaacacat 33
>gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_C04_A002 5', mRNA sequence
Length = 789
Score = 46.1 bits (23), Expect = 0.018
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
|||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 691 cggtggccttggaggtgacggtgaagttggtgtcgatccctgc 649
>gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 412
Score = 44.1 bits (22), Expect = 0.071
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgc 782
||||| || ||||| |||||||| ||||||||||||||
Sbjct: 411 gccttggaggtgacggtgaagttggtgtcgatccctgc 374
>gb|CW308239.1|CW308239 104_796_11468563_116_35730_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468563, DNA
sequence
Length = 683
Score = 42.1 bits (21), Expect = 0.28
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1937 tagtgatcacaatccacattaagaa 1961
|||||||||||||||| ||||||||
Sbjct: 399 tagtgatcacaatccagattaagaa 423
>gb|CW308240.1|CW308240 104_796_11468563_148_35738_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468563, DNA
sequence
Length = 481
Score = 42.1 bits (21), Expect = 0.28
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1937 tagtgatcacaatccacattaagaa 1961
|||||||||||||||| ||||||||
Sbjct: 325 tagtgatcacaatccagattaagaa 301
>gb|AW744834.1|AW744834 LG1_384_E04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 42.1 bits (21), Expect = 0.28
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 425 gggatatgaaggggtcgatcttcacccacagca 457
|||| ||||| || |||||||||||||||||||
Sbjct: 33 gggagatgaaaggatcgatcttcacccacagca 1
>gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 540
Score = 42.1 bits (21), Expect = 0.28
Identities = 78/97 (80%)
Strand = Plus / Minus
Query: 1929 tattgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctg 1988
|||||| ||||||||||||||||| || || | ||||| |||| || || ||||| |
Sbjct: 525 tattgatgtagtgatcacaatccaagttcagcaaataaggtgcattagttagtacagcag 466
Query: 1989 atacgcgaatcaaagcattcatggcaccagccttctt 2025
| || || | ||| |||||||| ||||||||||||||
Sbjct: 465 agactcggaccaatgcattcatagcaccagccttctt 429
>gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 542
Score = 42.1 bits (21), Expect = 0.28
Identities = 81/101 (80%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
||||| ||||||||||| || ||||| | |||| |||||| |||||||| || || ||
Sbjct: 106 acccagagcagcgagaagattgaagccaagaggatggaccacacaatgacaattgttggc 47
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggta 548
|| | ||||||| |||| | |||||||| ||||| |||||
Sbjct: 46 gttctgttctgcctcccaaccagacccttgaggaatgggta 6
>gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 42.1 bits (21), Expect = 0.28
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||||||||| || || | || || |||||||| || ||||||| |||||||||
Sbjct: 452 tcatcagaaacatagcaaganagcttctccacagggtagtcagcagcaaggatggacagg 393
Query: 2507 acagtgtt 2514
| ||||||
Sbjct: 392 atagtgtt 385
>gb|BG158738.1|BG158738 RHIZ2_44_F02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 316
Score = 42.1 bits (21), Expect = 0.28
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| |||| ||||| ||||| || || || |||||||||
Sbjct: 118 atgaaggggtcgatcctgacccagagcacggagaagatggaggccagcagcacggaccaa 59
Query: 490 a 490
|
Sbjct: 58 a 58
>gb|BI212040.1|BI212040 IP1_63_G04.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 42.1 bits (21), Expect = 0.28
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggta 548
||||||||||| |||||||| ||| ||||||||||| || ||||| |||||
Sbjct: 72 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggta 20
>gb|CD427212.1|CD427212 SA1_18_E03.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_18_E03_A002 3', mRNA sequence
Length = 492
Score = 42.1 bits (21), Expect = 0.28
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggta 548
||||||||||| |||||||| ||| ||||||||||| || ||||| |||||
Sbjct: 70 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggta 18
>gb|CF430600.1|CF430600 NIT1_3_E06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_E06_A002 3', mRNA sequence
Length = 458
Score = 42.1 bits (21), Expect = 0.28
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 496 acgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggta 548
||||||||||| |||||||| ||| ||||||||||| || ||||| |||||
Sbjct: 70 acgatggtcggggtgcggttttgccgacccatgagacctttgaggaatgggta 18
>gb|BZ334230.1|BZ334230 hx77g06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx77g06 5', DNA sequence
Length = 499
Score = 40.1 bits (20), Expect = 1.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagag 2420
||||||||||| || |||||||||| |||||||| ||||
Sbjct: 347 ggaacccattttctggcaaactctggagtttcagagagag 386
>gb|BZ334231.1|BZ334231 hx77g06.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx77g06 5', DNA sequence
Length = 502
Score = 40.1 bits (20), Expect = 1.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagag 2420
||||||||||| || |||||||||| |||||||| ||||
Sbjct: 296 ggaacccattttctggcaaactctggagtttcagagagag 257
>gb|BZ335207.1|BZ335207 hx96c01.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx96c01 5', DNA sequence
Length = 587
Score = 40.1 bits (20), Expect = 1.1
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagag 2420
||||||||||| || |||||||||| |||||||| ||||
Sbjct: 225 ggaacccattttctggcaaactctggagtttcagagagag 264
>gb|BZ335208.1|BZ335208 hx96c01.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx96c01 5', DNA sequence
Length = 675
Score = 40.1 bits (20), Expect = 1.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 2381 ggaacccatttccttgcaaactctgcggtttcagatagag 2420
||||||||||| || |||||||||| |||||||| ||||
Sbjct: 533 ggaacccattttctggcaaactctggagtttcagagagag 494
>gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890237, DNA
sequence
Length = 677
Score = 40.1 bits (20), Expect = 1.1
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||| |||||||| || || | | ||| |||||| | |||| |||||||||||||
Sbjct: 636 tccatcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatcacaa 577
Query: 1949 tcca 1952
||||
Sbjct: 576 tcca 573
>gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940114, DNA
sequence
Length = 564
Score = 40.1 bits (20), Expect = 1.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1478 ttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | ||||||||||| |||||
Sbjct: 306 ttctccaagctcatttgagacataagaagtga 275
Score = 38.2 bits (19), Expect = 4.4
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1525 accttcaaatccctcttctatatcttc 1551
|||||||| |||||| |||||||||||
Sbjct: 117 accttcaactccctcctctatatcttc 91
>gb|CW022694.1|CW022694 104_162_10431999_1_30008 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10431999, DNA sequence
Length = 282
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2021 ttcttgtggtgctggaagcc 2040
||||||||||||||||||||
Sbjct: 1 ttcttgtggtgctggaagcc 20
>gb|CW256903.1|CW256903 104_722_11227052_116_35153_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227052, DNA
sequence
Length = 677
Score = 40.1 bits (20), Expect = 1.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1687 caatacaggatcatagccatacaa 1710
|||||||| |||||||||||||||
Sbjct: 118 caatacagcatcatagccatacaa 95
>gb|CW294740.1|CW294740 104_775_11415345_116_35774_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11415345, DNA
sequence
Length = 711
Score = 40.1 bits (20), Expect = 1.1
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1687 caatacaggatcatagccatacaa 1710
|||||||| |||||||||||||||
Sbjct: 413 caatacagcatcatagccatacaa 436
>gb|CW294741.1|CW294741 104_775_11415345_148_35775_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11415345, DNA
sequence
Length = 689
Score = 40.1 bits (20), Expect = 1.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1687 caatacaggatcatagccatacaa 1710
|||||||| |||||||||||||||
Sbjct: 555 caatacagcatcatagccatacaa 532
>gb|CW491902.1|CW491902 fsbb001f281p11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281p11, DNA
sequence
Length = 710
Score = 40.1 bits (20), Expect = 1.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1687 caatacaggatcatagccatacaa 1710
|||||||| |||||||||||||||
Sbjct: 502 caatacagcatcatagccatacaa 479
>gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 40.1 bits (20), Expect = 1.1
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| || ||||| || ||||| || |||| || ||||| ||||| || ||||||
Sbjct: 354 tgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaatctct 295
Query: 1321 ttccccca 1328
||||||||
Sbjct: 294 ttccccca 287
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttag 1384
||||||||||||||||||||
Sbjct: 255 acatgtatagcttcctttag 236
>gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 40.1 bits (20), Expect = 1.1
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| || ||||| || ||||| || |||| || ||||| ||||| || ||||||
Sbjct: 248 tgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaatctct 189
Query: 1321 ttccccca 1328
||||||||
Sbjct: 188 ttccccca 181
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttag 1384
||||||||||||||||||||
Sbjct: 149 acatgtatagcttcctttag 130
>gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 40.1 bits (20), Expect = 1.1
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| || ||||| || ||||| || |||| || ||||| ||||| || ||||||
Sbjct: 374 tgcatcttaaatccagtcaagatatcctctgtaattgatccataaatccagccaatctct 315
Query: 1321 ttccccca 1328
||||||||
Sbjct: 314 ttccccca 307
Score = 40.1 bits (20), Expect = 1.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1365 acatgtatagcttcctttag 1384
||||||||||||||||||||
Sbjct: 275 acatgtatagcttcctttag 256
>gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 363
Score = 40.1 bits (20), Expect = 1.1
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1442 gtggatgcaataaaaattggagactggccaaa 1473
|||||||||| ||||| || ||||||||||||
Sbjct: 112 gtggatgcaacaaaaactgaagactggccaaa 81
>gb|BZ350747.1|BZ350747 ht60c02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht60c02 5', DNA sequence
Length = 130
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 812 caaagagatgtgcagaggtgcca 834
||||||||||||| |||||||||
Sbjct: 110 caaagagatgtgctgaggtgcca 88
>gb|CL157592.1|CL157592 104_345_10783695_116_31478_255 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783695, DNA
sequence
Length = 738
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||| ||||||||||
Sbjct: 116 gtccacttgaactcatacagctc 94
>gb|CW512986.1|CW512986 115_3_10511127_1_30020 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10511127, DNA sequence
Length = 633
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 2420 gcttcaaaagtcaacatag 2438
|||||||||||||||||||
Sbjct: 546 gcttcaaaagtcaacatag 528
>gb|CW513651.1|CW513651 115_5_10511837_1_30022 Sorghum unfiltered library (LibID: 115)
Sorghum bicolor genomic clone 10511837, DNA sequence
Length = 554
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2027 tggtgctggaagcctggcc 2045
|||||||||||||||||||
Sbjct: 131 tggtgctggaagcctggcc 149
>gb|CW022484.1|CW022484 104_161_10431871_1_30006 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10431871, DNA sequence
Length = 504
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 303 aaccaaacttcacaaaaaacaga 281
>gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10432463, DNA sequence
Length = 519
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatcca 1250
|||||||||||||||||| ||||
Sbjct: 119 ggcatgcagtagatggatctcca 97
>gb|CW080251.1|CW080251 104_408_10906137_116_32501_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906137, DNA
sequence
Length = 693
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 505 aaccaaacttcacaaaaaacaga 483
>gb|CW140861.1|CW140861 104_531_11136005_116_34924_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136005, DNA
sequence
Length = 616
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1550 tccatgttgaagatgggag 1568
|||||||||||||||||||
Sbjct: 288 tccatgttgaagatgggag 270
>gb|CW140862.1|CW140862 104_531_11136005_148_34920_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136005, DNA
sequence
Length = 634
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1550 tccatgttgaagatgggag 1568
|||||||||||||||||||
Sbjct: 528 tccatgttgaagatgggag 546
>gb|CW159001.1|CW159001 104_565_11149126_148_36405_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149126, DNA
sequence
Length = 695
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 572 aaccaaacttcacaaaaaacaga 594
>gb|CW195711.1|CW195711 104_619_11180783_116_36807_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180783, DNA
sequence
Length = 615
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 723 aaaatcaccatcatcatcg 741
|||||||||||||||||||
Sbjct: 469 aaaatcaccatcatcatcg 487
>gb|CW205182.1|CW205182 104_633_11186936_116_36928_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186936, DNA
sequence
Length = 614
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 812 caaagagatgtgcagaggtgcca 834
||||||||||||| |||||||||
Sbjct: 526 caaagagatgtgctgaggtgcca 504
>gb|CW205183.1|CW205183 104_633_11186936_148_36927_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186936, DNA
sequence
Length = 622
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 812 caaagagatgtgcagaggtgcca 834
||||||||||||| |||||||||
Sbjct: 248 caaagagatgtgctgaggtgcca 270
>gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203928, DNA
sequence
Length = 587
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatcca 1250
|||||||||||||||||| ||||
Sbjct: 570 ggcatgcagtagatggatctcca 548
>gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461315, DNA
sequence
Length = 613
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1228 ggcatgcagtagatggatatcca 1250
|||||||||||||||||| ||||
Sbjct: 203 ggcatgcagtagatggatctcca 181
>gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461315, DNA
sequence
Length = 684
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatcca 1250
|||||||||||||||||| ||||
Sbjct: 609 ggcatgcagtagatggatctcca 631
>gb|CW325732.1|CW325732 104_820_11477845_116_35929_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477845, DNA
sequence
Length = 628
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 452 aaccaaacttcacaaaaaacaga 430
>gb|CW325733.1|CW325733 104_820_11477845_148_35928_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477845, DNA
sequence
Length = 733
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 549 aaccaaacttcacaaaaaacaga 571
>gb|CW378646.1|CW378646 fsbb001f057i04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057i04, DNA
sequence
Length = 456
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2027 tggtgctggaagcctggcc 2045
|||||||||||||||||||
Sbjct: 32 tggtgctggaagcctggcc 50
>gb|CW391070.1|CW391070 fsbb001f077a13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077a13, DNA
sequence
Length = 590
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 441 gatcttcacccacagcagc 459
|||||||||||||||||||
Sbjct: 57 gatcttcacccacagcagc 39
>gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144l18, DNA
sequence
Length = 552
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||||| ||||||||
Sbjct: 474 gtccacttgaacacgtacagctc 452
>gb|CW472069.1|CW472069 fsbb001f226l15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f226l15, DNA
sequence
Length = 685
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 368 tcggatcatttcagcagtt 386
|||||||||||||||||||
Sbjct: 4 tcggatcatttcagcagtt 22
>gb|CW493094.1|CW493094 fsbb001f283l05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f283l05, DNA
sequence
Length = 583
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2690 aaccaaacttcacaaataacaga 2712
|||||||||||||||| ||||||
Sbjct: 97 aaccaaacttcacaaaaaacaga 75
>gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f288o02, DNA
sequence
Length = 628
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1228 ggcatgcagtagatggatatcca 1250
|||||||||||||||||| ||||
Sbjct: 565 ggcatgcagtagatggatctcca 587
>gb|AW284365.1|AW284365 LG1_275_F04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 421
Score = 38.2 bits (19), Expect = 4.4
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctc 719
|||||||||||||| ||||||||
Sbjct: 49 gtccacttgaacacgtacagctc 27
>gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 419
Score = 38.2 bits (19), Expect = 4.4
Identities = 112/143 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || ||||||||||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 294 ttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgcttcaaaggta 235
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||||||||| || || || || ||| || ||||||||
Sbjct: 234 agcattgcagcaccatcatcagaaacatagcaggagaccttagtaaccggataatccacg 175
Query: 2492 gcaagaatggacaggacagtgtt 2514
| ||| ||||| |||||||||||
Sbjct: 174 gaaaggatggaaaggacagtgtt 152
>gb|BI245560.1|BI245560 IP1_67_A11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 504
Score = 38.2 bits (19), Expect = 4.4
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccac 453
||||| || ||||| ||||| || |||||||||||||||
Sbjct: 39 ttctgtgtcggggagatgaaaggatcgatcttcacccac 1
>gb|CD427091.1|CD427091 SA1_17_F09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_F09_A002 3', mRNA sequence
Length = 574
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 441 gatcttcacccacagcagc 459
|||||||||||||||||||
Sbjct: 328 gatcttcacccacagcagc 310
>gb|CF071168.1|CF071168 FE1_15_B03.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_15_B03_A002 5', mRNA sequence
Length = 698
Score = 38.2 bits (19), Expect = 4.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 2159 ccaggccanggagtgccatcagccat 2184
|||||||| ||||||||||||||||
Sbjct: 392 ccaggccaatgagtgccatcagccat 367
>gb|CF771303.1|CF771303 DSBF1_17_C10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_17_C10_A010 3', mRNA sequence
Length = 581
Score = 38.2 bits (19), Expect = 4.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 441 gatcttcacccacagcagc 459
|||||||||||||||||||
Sbjct: 100 gatcttcacccacagcagc 82
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 664,827
Number of Sequences: 832831
Number of extensions: 664827
Number of successful extensions: 176796
Number of sequences better than 10.0: 230
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 176206
Number of HSP's gapped (non-prelim): 540
length of query: 2856
length of database: 491,359,669
effective HSP length: 21
effective length of query: 2835
effective length of database: 473,870,218
effective search space: 1343422068030
effective search space used: 1343422068030
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)