BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805016.2.1
(1645 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134823.1|CN134823 OX1_28_E10.g1_A002 Oxidatively-stres... 1118 0.0
gb|CD431243.1|CD431243 ETH1_7_C11.g1_A002 Ethylene-treated ... 1066 0.0
gb|CN139079.1|CN139079 OX1_15_H02.g1_A002 Oxidatively-stres... 1049 0.0
gb|CX618468.1|CX618468 GABR1_39_G02.g1_A002 GA- or brassino... 1035 0.0
gb|CF482537.1|CF482537 POL1_7_C08.g1_A002 Pollen Sorghum bi... 1029 0.0
gb|CD203897.1|CD203897 HS1_2_F10.g1_A012 Heat-shocked seedl... 894 0.0
gb|CX607123.1|CX607123 ANR1_6_G07.g1_A002 Anaerobic roots S... 888 0.0
gb|BE357846.1|BE357846 DG1_22_F02.g1_A002 Dark Grown 1 (DG1... 846 0.0
gb|CD226896.1|CD226896 CCC1_48_F02.g1_A007 Callus culture/c... 846 0.0
gb|AW677511.1|AW677511 DG1_8_C06.b1_A002 Dark Grown 1 (DG1)... 807 0.0
gb|BE357781.1|BE357781 DG1_22_F02.b1_A002 Dark Grown 1 (DG1... 807 0.0
gb|CD233820.1|CD233820 SS1_4_C01.g1_A012 Salt-stressed seed... 805 0.0
gb|CX616194.1|CX616194 GABR1_26_A10.g1_A002 GA- or brassino... 801 0.0
gb|CD207745.1|CD207745 HS1_34_H03.g1_A012 Heat-shocked seed... 795 0.0
gb|CN138990.1|CN138990 OX1_15_H02.b1_A002 Oxidatively-stres... 783 0.0
gb|BG355756.2|BG355756 EM1_19_B10.b1_A002 Embryo 1 (EM1) So... 781 0.0
gb|BE595237.1|BE595237 PI1_47_F04.b1_A002 Pathogen induced ... 749 0.0
gb|CX616359.1|CX616359 GABR1_27_A09.g1_A002 GA- or brassino... 737 0.0
gb|CD214179.1|CD214179 HS1_70_G11.g1_A012 Heat-shocked seed... 729 0.0
gb|CD203870.1|CD203870 HS1_2_F10.b1_A012 Heat-shocked seedl... 716 0.0
gb|CN134748.1|CN134748 OX1_28_E10.b1_A002 Oxidatively-stres... 710 0.0
gb|BE125875.1|BE125875 DG1_59_A11.b1_A002 Dark Grown 1 (DG1... 706 0.0
gb|BG463465.1|BG463465 EM1_49_H03.b1_A002 Embryo 1 (EM1) So... 676 0.0
gb|BE592605.1|BE592605 WS1_95_F07.b1_A002 Water-stressed 1 ... 666 0.0
gb|BG322500.1|BG322500 EM1_28_G05.b1_A002 Embryo 1 (EM1) So... 658 0.0
gb|BG356240.1|BG356240 EM1_23_B09.b1_A002 Embryo 1 (EM1) So... 656 0.0
gb|BG948568.1|BG948568 IP1_11_C05.b1_A002 Immature pannicle... 650 0.0
gb|BM322562.1|BM322562 PIC1_6_D07.b1_A002 Pathogen-infected... 650 0.0
gb|BG556582.1|BG556582 EM1_37_A09.b1_A002 Embryo 1 (EM1) So... 648 0.0
gb|AW287128.2|AW287128 LG1_265_H04.b2_A002 Light Grown 1 (L... 624 e-177
gb|AW287131.2|AW287131 LG1_265_H07.b2_A002 Light Grown 1 (L... 624 e-177
gb|BE592606.1|BE592606 WS1_95_F08.b1_A002 Water-stressed 1 ... 579 e-163
gb|BM324169.1|BM324169 PIC1_25_D02.b1_A002 Pathogen-infecte... 579 e-163
gb|BG560235.1|BG560235 RHIZ2_71_G03.b1_A003 Rhizome2 (RHIZ2... 575 e-162
gb|AW677356.1|AW677356 DG1_6_F08.b1_A002 Dark Grown 1 (DG1)... 569 e-160
gb|CF758836.1|CF758836 DSAF1_37_B09.g1_A011 Drought-stresse... 551 e-155
gb|CD211472.1|CD211472 HS1_60_G08.g1_A012 Heat-shocked seed... 478 e-133
gb|CX607033.1|CX607033 ANR1_6_G07.b1_A002 Anaerobic roots S... 474 e-131
gb|CD214074.1|CD214074 HS1_70_G11.b1_A012 Heat-shocked seed... 472 e-131
gb|BE592735.1|BE592735 WS1_95_F07.g1_A002 Water-stressed 1 ... 468 e-130
gb|BG356001.2|BG356001 EM1_19_B10.g1_A002 Embryo 1 (EM1) So... 462 e-128
gb|CX618388.1|CX618388 GABR1_39_G02.b1_A002 GA- or brassino... 454 e-125
gb|CW293918.1|CW293918 104_774_11414913_116_35773_037 Sorgh... 432 e-119
gb|BG411018.1|BG411018 EM1_28_G05.g1_A002 Embryo 1 (EM1) So... 418 e-115
gb|BG948255.1|BG948255 IP1_11_C05.g1_A002 Immature pannicle... 394 e-107
gb|CF757735.1|CF757735 DSAF1_21_F03.g1_A011 Drought-stresse... 381 e-103
gb|CF482461.1|CF482461 POL1_7_C08.b1_A002 Pollen Sorghum bi... 375 e-102
gb|CD211449.1|CD211449 HS1_60_G08.b1_A012 Heat-shocked seed... 369 e-100
gb|CW293919.1|CW293919 104_774_11414913_148_35772_037 Sorgh... 327 2e-087
gb|BG556435.1|BG556435 EM1_37_A09.g1_A002 Embryo 1 (EM1) So... 321 1e-085
gb|CL180843.1|CL180843 104_391_10896311_116_31928_071 Sorgh... 303 3e-080
gb|CX616124.1|CX616124 GABR1_26_A10.b1_A002 GA- or brassino... 287 2e-075
gb|BE594927.1|BE594927 PI1_47_F04.g1_A002 Pathogen induced ... 260 4e-067
gb|BZ627954.1|BZ627954 ih56g04.b1 WGS-SbicolorF (DH5a methy... 240 3e-061
gb|CD233792.1|CD233792 SS1_4_C01.b1_A012 Salt-stressed seed... 222 8e-056
gb|CD224705.1|CD224705 CCC1_35_D06.g1_A007 Callus culture/c... 220 3e-055
gb|CX613335.1|CX613335 GABR1_7_C11.g1_A002 GA- or brassinol... 216 5e-054
gb|BG356491.1|BG356491 EM1_23_B09.g1_A002 Embryo 1 (EM1) So... 212 8e-053
gb|BE361131.1|BE361131 DG1_70_C11.b1_A002 Dark Grown 1 (DG1... 204 2e-050
gb|BG948498.1|BG948498 IP1_10_D09.b1_A002 Immature pannicle... 204 2e-050
gb|CF431723.1|CF431723 NIT1_10_C12.b1_A002 Nitrogen-deficie... 204 2e-050
gb|CW099664.1|CW099664 104_466_11003672_148_34377_020 Sorgh... 196 5e-048
gb|BE592736.1|BE592736 WS1_95_F08.g1_A002 Water-stressed 1 ... 190 3e-046
gb|CN149630.1|CN149630 WOUND1_64_A08.b1_A002 Wounded leaves... 180 3e-043
gb|BG560075.1|BG560075 RHIZ2_69_A12.b1_A003 Rhizome2 (RHIZ2... 147 4e-033
gb|AW565048.1|AW565048 LG1_319_F05.b1_A002 Light Grown 1 (L... 137 4e-030
gb|CN149712.1|CN149712 WOUND1_64_A08.g1_A002 Wounded leaves... 135 1e-029
gb|CW347690.1|CW347690 fsbb001f007l11f0 Sorghum methylation... 107 3e-021
gb|CX613246.1|CX613246 GABR1_7_C11.b1_A002 GA- or brassinol... 101 2e-019
gb|BG273497.1|BG273497 OV2_26_D12.b1_A002 Ovary 2 (OV2) Sor... 100 8e-019
gb|DV162784.2|DV162784 P3-B23 Sorghum bicolor greenbug-resp... 96 1e-017
gb|BG948187.1|BG948187 IP1_10_D09.g1_A002 Immature pannicle... 94 5e-017
gb|CF489267.1|CF489267 POL1_56_C10.b1_A002 Pollen Sorghum b... 94 5e-017
gb|DV162784.1|DV162784 P3-B23 Sorghum bicolor greenbug-resp... 90 8e-016
gb|AW563947.1|AW563947 LG1_275_F07.b1_A002 Light Grown 1 (L... 86 1e-014
gb|BE594536.1|BE594536 PI1_34_D12.b1_A002 Pathogen induced ... 86 1e-014
gb|BF176939.1|BF176939 EM1_4_F04.b1_A002 Embryo 1 (EM1) Sor... 86 1e-014
gb|BF586242.1|BF586242 FM1_27_E05.b1_A003 Floral-Induced Me... 86 1e-014
gb|BG050997.1|BG050997 FM1_54_G04.b1_A003 Floral-Induced Me... 86 1e-014
gb|BG051240.1|BG051240 FM1_57_H12.b1_A003 Floral-Induced Me... 86 1e-014
gb|BG411048.1|BG411048 EM1_25_B03.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG411131.1|BG411131 EM1_26_A12.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG411225.1|BG411225 EM1_27_B08.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG463431.1|BG463431 EM1_49_D07.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG557367.1|BG557367 EM1_43_B02.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG557485.1|BG557485 EM1_44_G06.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG817463.1|BG817463 EM1_76_C07.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BG355737.2|BG355737 EM1_18_H05.b1_A002 Embryo 1 (EM1) So... 86 1e-014
gb|BM322400.1|BM322400 PIC1_4_D04.b1_A002 Pathogen-infected... 86 1e-014
gb|BM324721.1|BM324721 PIC1_34_G08.b1_A002 Pathogen-infecte... 86 1e-014
gb|BM325936.1|BM325936 PIC1_54_F09.b1_A002 Pathogen-infecte... 86 1e-014
gb|CB928717.1|CB928717 ABA1_17_C12.g1_A012 Abscisic acid-tr... 86 1e-014
gb|CD206396.1|CD206396 HS1_22_C03.g1_A012 Heat-shocked seed... 86 1e-014
gb|CD206434.1|CD206434 HS1_22_D04.g1_A012 Heat-shocked seed... 86 1e-014
gb|CD209580.1|CD209580 HS1_43_D10.g1_A012 Heat-shocked seed... 86 1e-014
gb|CD209627.1|CD209627 HS1_43_D09.g1_A012 Heat-shocked seed... 86 1e-014
gb|CD219628.1|CD219628 CCC1_57_D10.g1_A007 Callus culture/c... 86 1e-014
gb|CD220503.1|CD220503 CCC1_67_G02.g1_A007 Callus culture/c... 86 1e-014
gb|CD220970.1|CD220970 CCC1_72_B08.g1_A007 Callus culture/c... 86 1e-014
gb|CD221275.1|CD221275 CCC1_74_H11.g1_A007 Callus culture/c... 86 1e-014
gb|CD222835.1|CD222835 CCC1_24_C03.g1_A007 Callus culture/c... 86 1e-014
gb|CD223015.1|CD223015 CCC1_25_A09.g1_A007 Callus culture/c... 86 1e-014
gb|CD223060.1|CD223060 CCC1_25_E03.g1_A007 Callus culture/c... 86 1e-014
gb|CD223368.1|CD223368 CCC1_27_A11.g1_A007 Callus culture/c... 86 1e-014
gb|CD223740.1|CD223740 CCC1_29_A10.g1_A007 Callus culture/c... 86 1e-014
gb|CD223872.1|CD223872 CCC1_30_F10.g1_A007 Callus culture/c... 86 1e-014
gb|CD224077.1|CD224077 CCC1_31_D05.g1_A007 Callus culture/c... 86 1e-014
gb|CD225142.1|CD225142 CCC1_38_G01.g1_A007 Callus culture/c... 86 1e-014
gb|CD225173.1|CD225173 CCC1_38_D04.g1_A007 Callus culture/c... 86 1e-014
gb|CD225460.1|CD225460 CCC1_3_G10.g1_A007 Callus culture/ce... 86 1e-014
gb|CD225940.1|CD225940 CCC1_42_D07.g1_A007 Callus culture/c... 86 1e-014
gb|CD227325.1|CD227325 CCC1_50_G04.g1_A007 Callus culture/c... 86 1e-014
gb|CD227473.1|CD227473 CCC1_51_A01.g1_A007 Callus culture/c... 86 1e-014
gb|CD227893.1|CD227893 CCC1_56_F09.g1_A007 Callus culture/c... 86 1e-014
gb|CD227956.1|CD227956 CCC1_56_B03.g1_A007 Callus culture/c... 86 1e-014
gb|CD227960.1|CD227960 CCC1_56_C08.g1_A007 Callus culture/c... 86 1e-014
gb|CD228057.1|CD228057 CCC1_5_H10.g1_A007 Callus culture/ce... 86 1e-014
gb|CD228756.1|CD228756 CCC1_9_E06.g1_A007 Callus culture/ce... 86 1e-014
gb|CD232971.1|CD232971 SS1_10_F07.g1_A012 Salt-stressed see... 86 1e-014
gb|CD429652.1|CD429652 ETH1_14_A02.g1_A002 Ethylene-treated... 86 1e-014
gb|CD429794.1|CD429794 ETH1_15_C03.g1_A002 Ethylene-treated... 86 1e-014
gb|CD431931.1|CD431931 ETH1_11_B02.g1_A002 Ethylene-treated... 86 1e-014
gb|CF428341.1|CF428341 PH1_14_H08.g1_A002 Phosphorous-defic... 86 1e-014
gb|CF432919.1|CF432919 NIT1_19_D04.g1_A002 Nitrogen-deficie... 86 1e-014
gb|CN132000.1|CN132000 OX1_3_B06.g1_A002 Oxidatively-stress... 86 1e-014
gb|CN135295.1|CN135295 OX1_31_G07.g1_A002 Oxidatively-stres... 86 1e-014
gb|CN137304.1|CN137304 OX1_56_A07.g1_A002 Oxidatively-stres... 86 1e-014
gb|CN138426.1|CN138426 OX1_63_E11.g1_A002 Oxidatively-stres... 86 1e-014
gb|CN143649.1|CN143649 WOUND1_17_C03.g1_A002 Wounded leaves... 86 1e-014
gb|CX607121.1|CX607121 ANR1_6_G05.g1_A002 Anaerobic roots S... 86 1e-014
gb|CX616775.1|CX616775 GABR1_29_G12.g1_A002 GA- or brassino... 86 1e-014
gb|CX616893.1|CX616893 GABR1_30_B11.g1_A002 GA- or brassino... 86 1e-014
gb|CD463943.1|CD463943 ETH1_47_E11.g1_A002 Ethylene-treated... 84 5e-014
gb|CW287745.1|CW287745 104_766_11411577_148_35533_047 Sorgh... 82 2e-013
gb|CW287744.1|CW287744 104_766_11411577_116_35529_047 Sorgh... 80 7e-013
gb|BE597607.1|BE597607 PI1_71_G03.b1_A002 Pathogen induced ... 80 7e-013
gb|BE599065.1|BE599065 PI1_85_A01.b1_A002 Pathogen induced ... 80 7e-013
gb|BF586980.1|BF586980 FM1_31_G11.b1_A003 Floral-Induced Me... 80 7e-013
gb|BG102925.1|BG102925 RHIZ2_35_A09.b1_A003 Rhizome2 (RHIZ2... 80 7e-013
gb|BF421339.1|BF421339 FM1_7_D11.b1_A003 Floral-Induced Mer... 78 3e-012
gb|BM324781.1|BM324781 PIC1_35_F01.b1_A002 Pathogen-infecte... 78 3e-012
gb|CD212084.1|CD212084 HS1_68_E04.g1_A012 Heat-shocked seed... 78 3e-012
gb|CD219880.1|CD219880 CCC1_59_B08.g1_A007 Callus culture/c... 78 3e-012
gb|CD223189.1|CD223189 CCC1_26_B03.g1_A007 Callus culture/c... 78 3e-012
gb|CD223374.1|CD223374 CCC1_27_C10.g1_A007 Callus culture/c... 78 3e-012
gb|CD231368.1|CD231368 SS1_15_D11.g1_A012 Salt-stressed see... 78 3e-012
gb|CN125514.1|CN125514 RHOH1_11_C02.g1_A002 Acid- and alkal... 78 3e-012
gb|BF480900.1|BF480900 FM1_14_G05.b1_A003 Floral-Induced Me... 76 1e-011
gb|CW256644.1|CW256644 104_721_11226903_148_35144_052 Sorgh... 74 5e-011
gb|CW447812.1|CW447812 fsbb001f181b17f0 Sorghum methylation... 74 5e-011
gb|AW923747.1|AW923747 DG1_59_A11.g1_A002 Dark Grown 1 (DG1... 74 5e-011
gb|BF317945.1|BF317945 OV1_9_G08.b1_A002 Ovary 1 (OV1) Sorg... 74 5e-011
gb|BF317958.1|BF317958 OV1_9_H12.b1_A002 Ovary 1 (OV1) Sorg... 74 5e-011
gb|BG463280.1|BG463280 EM1_48_F06.b1_A002 Embryo 1 (EM1) So... 74 5e-011
gb|BM327047.1|BM327047 PIC1_6_D07.g1_A002 Pathogen-infected... 74 5e-011
gb|CW027659.1|CW027659 104_254_10498639_116_30396 Sorghum m... 72 2e-010
gb|CW099663.1|CW099663 104_466_11003672_116_34381_020 Sorgh... 72 2e-010
gb|CL705631.2|CL705631 SP__Bb0045G13.r SP__Bb Sorghum propi... 72 2e-010
gb|AW745071.1|AW745071 LG1_386_E02.b1_A002 Light Grown 1 (L... 72 2e-010
gb|AW747164.1|AW747164 WS1_66_G03.b1_A002 Water-stressed 1 ... 72 2e-010
gb|BE358495.1|BE358495 DG1_30_D12.b1_A002 Dark Grown 1 (DG1... 72 2e-010
gb|BE598163.1|BE598163 PI1_66_E02.b1_A002 Pathogen induced ... 72 2e-010
gb|BF588351.1|BF588351 FM1_40_F08.b1_A003 Floral-Induced Me... 72 2e-010
gb|BG052151.1|BG052151 RHIZ2_6_G07.b1_A003 Rhizome2 (RHIZ2)... 72 2e-010
gb|BG053270.1|BG053270 RHIZ2_25_C02.b1_A003 Rhizome2 (RHIZ2... 72 2e-010
gb|BG103320.1|BG103320 RHIZ2_18_G06.b1_A003 Rhizome2 (RHIZ2... 72 2e-010
gb|BG273417.1|BG273417 OV2_25_D11.b1_A002 Ovary 2 (OV2) Sor... 72 2e-010
gb|BG412119.1|BG412119 OV2_38_B09.b1_A002 Ovary 2 (OV2) Sor... 72 2e-010
gb|BG412858.1|BG412858 OV2_35_G07.b1_A002 Ovary 2 (OV2) Sor... 72 2e-010
gb|BG560368.1|BG560368 RHIZ2_73_E11.b1_A003 Rhizome2 (RHIZ2... 72 2e-010
gb|BI211274.1|BI211274 IP1_58_D11.b1_A002 Immature pannicle... 72 2e-010
gb|BI211312.1|BI211312 IP1_59_B06.b1_A002 Immature pannicle... 72 2e-010
gb|CD208014.1|CD208014 HS1_36_B09.g1_A012 Heat-shocked seed... 72 2e-010
gb|CD222266.1|CD222266 CCC1_2_H10.g1_A007 Callus culture/ce... 72 2e-010
gb|CD224693.1|CD224693 CCC1_35_G10.g1_A007 Callus culture/c... 72 2e-010
gb|CD226114.1|CD226114 CCC1_43_F05.g1_A007 Callus culture/c... 72 2e-010
gb|CD227955.1|CD227955 CCC1_56_D05.g1_A007 Callus culture/c... 72 2e-010
gb|CD233359.1|CD233359 SS1_13_C10.g1_A012 Salt-stressed see... 72 2e-010
gb|CD428916.1|CD428916 ETH1_1_C03.g1_A002 Ethylene-treated ... 72 2e-010
gb|CD430382.1|CD430382 ETH1_18_F10.g1_A002 Ethylene-treated... 72 2e-010
gb|CF427621.1|CF427621 PH1_16_A09.g1_A002 Phosphorous-defic... 72 2e-010
gb|CN137936.1|CN137936 OX1_60_E08.g1_A002 Oxidatively-stres... 72 2e-010
gb|CN147698.1|CN147698 WOUND1_51_C06.g1_A002 Wounded leaves... 72 2e-010
gb|CN147837.1|CN147837 WOUND1_52_C06.g1_A002 Wounded leaves... 72 2e-010
gb|CN148315.1|CN148315 WOUND1_55_C04.g1_A002 Wounded leaves... 72 2e-010
gb|CN149433.1|CN149433 WOUND1_62_F03.g1_A002 Wounded leaves... 72 2e-010
gb|CN151003.1|CN151003 WOUND1_72_G09.g1_A002 Wounded leaves... 72 2e-010
gb|CN151473.1|CN151473 WOUND1_75_D12.g1_A002 Wounded leaves... 72 2e-010
gb|CX613570.1|CX613570 GABR1_8_H12.g1_A002 GA- or brassinol... 72 2e-010
gb|CX615361.1|CX615361 GABR1_19_E04.g1_A002 GA- or brassino... 72 2e-010
gb|BE599483.1|BE599483 PI1_88_B01.b1_A002 Pathogen induced ... 70 7e-010
gb|BI075834.1|BI075834 IP1_21_G09.b1_A002 Immature pannicle... 70 7e-010
gb|CD207440.1|CD207440 HS1_65_G08.g1_A012 Heat-shocked seed... 70 7e-010
gb|AW923437.1|AW923437 DG1_52_C06.b1_A002 Dark Grown 1 (DG1... 68 3e-009
gb|BE357448.1|BE357448 DG1_15_D10.b2_A002 Dark Grown 1 (DG1... 68 3e-009
gb|BF176957.1|BF176957 EM1_4_G11.b1_A002 Embryo 1 (EM1) Sor... 68 3e-009
gb|BF177188.1|BF177188 EM1_2_G11.b1_A002 Embryo 1 (EM1) Sor... 68 3e-009
gb|BG159614.1|BG159614 OV2_6_G10.b1_A002 Ovary 2 (OV2) Sorg... 68 3e-009
gb|BG465718.1|BG465718 RHIZ2_47_G10.b1_A003 Rhizome2 (RHIZ2... 68 3e-009
gb|BG560031.1|BG560031 RHIZ2_68_F01.b1_A003 Rhizome2 (RHIZ2... 68 3e-009
gb|BI211939.1|BI211939 IP1_62_D06.b1_A002 Immature pannicle... 68 3e-009
gb|BM322627.1|BM322627 PIC1_7_B08.b1_A002 Pathogen-infected... 68 3e-009
gb|BM323191.1|BM323191 PIC1_16_D06.b1_A002 Pathogen-infecte... 68 3e-009
gb|BM323238.1|BM323238 PIC1_17_A05.b1_A002 Pathogen-infecte... 68 3e-009
gb|BM325143.1|BM325143 PIC1_40_B12.b1_A002 Pathogen-infecte... 68 3e-009
gb|BM325317.1|BM325317 PIC1_43_G12.b1_A002 Pathogen-infecte... 68 3e-009
gb|CD231265.1|CD231265 SS1_15_D11.b1_A012 Salt-stressed see... 68 3e-009
gb|CD431195.1|CD431195 ETH1_7_C11.b1_A002 Ethylene-treated ... 68 3e-009
gb|CN125434.1|CN125434 RHOH1_11_C02.b1_A002 Acid- and alkal... 68 3e-009
gb|CN125801.1|CN125801 RHOH1_13_H09.b1_A002 Acid- and alkal... 68 3e-009
gb|CN131168.1|CN131168 RHOH1_46_G06.b1_A002 Acid- and alkal... 68 3e-009
gb|CN135218.1|CN135218 OX1_31_G07.b1_A002 Oxidatively-stres... 68 3e-009
gb|CN135470.1|CN135470 OX1_37_B10.b1_A002 Oxidatively-stres... 68 3e-009
gb|CN140587.1|CN140587 OX1_45_H02.b1_A002 Oxidatively-stres... 68 3e-009
gb|CX612548.1|CX612548 GABR1_3_C03.b1_A002 GA- or brassinol... 68 3e-009
gb|CX616804.1|CX616804 GABR1_30_B11.b1_A002 GA- or brassino... 68 3e-009
gb|BF317957.1|BF317957 OV1_9_H11.b1_A002 Ovary 1 (OV1) Sorg... 66 1e-008
gb|CN138344.1|CN138344 OX1_63_E11.b1_A002 Oxidatively-stres... 66 1e-008
gb|BE594690.1|BE594690 PI1_36_D02.b1_A002 Pathogen induced ... 64 4e-008
gb|CD224675.1|CD224675 CCC1_35_F09.g1_A007 Callus culture/c... 64 4e-008
gb|CD226746.1|CD226746 CCC1_47_D06.g1_A007 Callus culture/c... 64 4e-008
gb|CF485804.1|CF485804 POL1_33_F09.g1_A002 Pollen Sorghum b... 64 4e-008
gb|CN145199.1|CN145199 WOUND1_27_A03.g1_A002 Wounded leaves... 64 4e-008
gb|CX609467.1|CX609467 ANR1_12_H05.g1_A002 Anaerobic roots ... 64 4e-008
gb|AW925018.1|AW925018 WS1_74_D05.b1_A002 Water-stressed 1 ... 62 2e-007
gb|AW925019.1|AW925019 WS1_74_D06.b1_A002 Water-stressed 1 ... 62 2e-007
gb|BG102270.1|BG102270 RHIZ2_24_B12.b1_A003 Rhizome2 (RHIZ2... 62 2e-007
gb|CD208433.1|CD208433 HS1_37_E07.g1_A012 Heat-shocked seed... 62 2e-007
gb|BG411685.1|BG411685 EM1_60_E11.b1_A002 Embryo 1 (EM1) So... 60 7e-007
gb|BG463546.1|BG463546 EM1_49_H03.g1_A002 Embryo 1 (EM1) So... 60 7e-007
gb|CX610526.1|CX610526 ANR1_19_F06.b1_A002 Anaerobic roots ... 60 7e-007
gb|BF317683.1|BF317683 OV1_12_A01.g1_A002 Ovary 1 (OV1) Sor... 58 3e-006
gb|BF317807.1|BF317807 OV1_9_G08.g1_A002 Ovary 1 (OV1) Sorg... 58 3e-006
gb|CN141929.1|CN141929 WOUND1_2_F05.g1_A002 Wounded leaves ... 58 3e-006
gb|CW286181.1|CW286181 104_763_11410744_116_35512_052 Sorgh... 56 1e-005
gb|CW286182.1|CW286182 104_763_11410744_148_35645_052 Sorgh... 56 1e-005
gb|BE361265.1|BE361265 DG1_70_C11.g1_A002 Dark Grown 1 (DG1... 56 1e-005
gb|BF317819.1|BF317819 OV1_9_H11.g1_A002 Ovary 1 (OV1) Sorg... 56 1e-005
gb|BG357946.1|BG357946 OV2_32_C06.b1_A002 Ovary 2 (OV2) Sor... 56 1e-005
gb|AI724662.1|AI724662 RHIZ1_11_D11.y2_A001 Rhizome1 (RHIZ1... 50 7e-004
gb|AW565371.1|AW565371 LG1_343_D03.g1_A002 Light Grown 1 (L... 50 7e-004
gb|AW747701.1|AW747701 WS1_75_F04.g1_A002 Water-stressed 1 ... 50 7e-004
gb|AW925118.1|AW925118 WS1_75_F04.b1_A002 Water-stressed 1 ... 50 7e-004
gb|BE358660.1|BE358660 DG1_30_D12.g1_A002 Dark Grown 1 (DG1... 50 7e-004
gb|BE363528.1|BE363528 WS1_63_A10.g1_A002 Water-stressed 1 ... 50 7e-004
gb|BE593882.1|BE593882 WS1_103_E05.g1_A002 Water-stressed 1... 50 7e-004
gb|BE597872.1|BE597872 PI1_66_E02.g1_A002 Pathogen induced ... 50 7e-004
gb|BF587797.1|BF587797 FM1_40_F08.g1_A003 Floral-Induced Me... 50 7e-004
gb|BG051937.1|BG051937 RHIZ2_6_G07.g1_A003 Rhizome2 (RHIZ2)... 50 7e-004
gb|BG052575.1|BG052575 RHIZ2_25_C02.g1_A003 Rhizome2 (RHIZ2... 50 7e-004
gb|BG102049.1|BG102049 RHIZ2_24_B12.g1_A003 Rhizome2 (RHIZ2... 50 7e-004
gb|BG103152.1|BG103152 RHIZ2_18_G06.g1_A003 Rhizome2 (RHIZ2... 50 7e-004
gb|BG273268.1|BG273268 OV2_25_D11.g1_A002 Ovary 2 (OV2) Sor... 50 7e-004
gb|BG357626.1|BG357626 OV2_32_C06.g1_A002 Ovary 2 (OV2) Sor... 50 7e-004
gb|BG411797.1|BG411797 OV2_38_B09.g1_A002 Ovary 2 (OV2) Sor... 50 7e-004
gb|BG412551.1|BG412551 OV2_35_G07.g1_A002 Ovary 2 (OV2) Sor... 50 7e-004
gb|BG464803.1|BG464803 EM1_34_D08.g1_A002 Embryo 1 (EM1) So... 50 7e-004
gb|BG559780.1|BG559780 RHIZ2_73_E11.g1_A003 Rhizome2 (RHIZ2... 50 7e-004
gb|BM318032.1|BM318032 PI1_36_D02.g9_A002 Pathogen induced ... 50 7e-004
gb|BM327641.1|BM327641 PIC1_8_E06.g1_A002 Pathogen-infected... 50 7e-004
gb|BM329508.1|BM329508 PIC1_39_A06.g1_A002 Pathogen-infecte... 50 7e-004
gb|BM330373.1|BM330373 PIC1_51_B05.g1_A002 Pathogen-infecte... 50 7e-004
gb|CD208915.1|CD208915 HS1_45_B05.b1_A012 Heat-shocked seed... 50 7e-004
gb|CD221719.1|CD221719 CCC1_70_D08.g1_A007 Callus culture/c... 50 7e-004
gb|CD226032.1|CD226032 CCC1_43_F05.b1_A007 Callus culture/c... 50 7e-004
gb|CD226654.1|CD226654 CCC1_47_D06.b1_A007 Callus culture/c... 50 7e-004
gb|CD227659.1|CD227659 CCC1_53_E08.b1_A007 Callus culture/c... 50 7e-004
gb|CD230914.1|CD230914 SS1_20_C12.b1_A012 Salt-stressed see... 50 7e-004
gb|CD233338.1|CD233338 SS1_13_C10.b1_A012 Salt-stressed see... 50 7e-004
gb|CD430338.1|CD430338 ETH1_18_F10.b1_A002 Ethylene-treated... 50 7e-004
gb|CD432411.1|CD432411 ETH1_29_C08.g1_A002 Ethylene-treated... 50 7e-004
gb|CF426923.1|CF426923 PH1_2_H02.g1_A002 Phosphorous-defici... 50 7e-004
gb|CF429442.1|CF429442 PH1_22_G07.b1_A002 Phosphorous-defic... 50 7e-004
gb|CF430716.1|CF430716 NIT1_2_D06.b1_A002 Nitrogen-deficien... 50 7e-004
gb|CF485731.1|CF485731 POL1_33_F09.b1_A002 Pollen Sorghum b... 50 7e-004
gb|CF760257.1|CF760257 DSAF1_57_D11.b1_A011 Drought-stresse... 50 7e-004
gb|CF760267.1|CF760267 DSAF1_57_E12.b1_A011 Drought-stresse... 50 7e-004
gb|CN130368.1|CN130368 RHOH1_41_B07.b1_A002 Acid- and alkal... 50 7e-004
gb|CN130440.1|CN130440 RHOH1_41_B07.g1_A002 Acid- and alkal... 50 7e-004
gb|CN141850.1|CN141850 WOUND1_2_F05.b1_A002 Wounded leaves ... 50 7e-004
gb|CN145125.1|CN145125 WOUND1_27_A03.b2_A002 Wounded leaves... 50 7e-004
gb|CN148242.1|CN148242 WOUND1_55_C04.b1_A002 Wounded leaves... 50 7e-004
gb|CN149349.1|CN149349 WOUND1_62_F03.b1_A002 Wounded leaves... 50 7e-004
gb|CX609384.1|CX609384 ANR1_12_H05.b1_A002 Anaerobic roots ... 50 7e-004
gb|CX613478.1|CX613478 GABR1_8_H12.b1_A002 GA- or brassinol... 50 7e-004
gb|CX615276.1|CX615276 GABR1_19_E04.b1_A002 GA- or brassino... 50 7e-004
gb|AW679329.1|AW679329 WS1_23_A04.g1_A002 Water-stressed 1 ... 48 0.003
gb|BE599322.1|BE599322 PI1_88_B01.g1_A002 Pathogen induced ... 48 0.003
gb|BF176745.1|BF176745 EM1_4_F04.g1_A002 Embryo 1 (EM1) Sor... 48 0.003
gb|BF317820.1|BF317820 OV1_9_H12.g1_A002 Ovary 1 (OV1) Sorg... 48 0.003
gb|CD221659.1|CD221659 CCC1_70_C07.b1_A007 Callus culture/c... 48 0.003
gb|CF432786.1|CF432786 NIT1_19_D04.b1_A002 Nitrogen-deficie... 48 0.003
gb|CX607031.1|CX607031 ANR1_6_G05.b1_A002 Anaerobic roots S... 48 0.003
gb|CW092467.1|CW092467 104_455_10999186_116_33052_047 Sorgh... 46 0.010
gb|CW135747.1|CW135747 104_520_11118012_116_34837_040 Sorgh... 46 0.010
gb|BG241849.1|BG241849 RHIZ2_51_E01.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG241863.1|BG241863 RHIZ2_51_F03.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG465685.1|BG465685 RHIZ2_47_E01.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BG465698.1|BG465698 RHIZ2_47_F02.b1_A003 Rhizome2 (RHIZ2... 46 0.010
gb|BI098299.1|BI098299 IP1_30_F10.b1_A002 Immature pannicle... 46 0.010
gb|CW205574.1|CW205574 104_634_11187138_116_36954_079 Sorgh... 44 0.041
gb|CW205575.1|CW205575 104_634_11187138_148_36953_079 Sorgh... 44 0.041
gb|CW376271.1|CW376271 fsbb001f054b07f0 Sorghum methylation... 44 0.041
gb|CN149049.1|CN149049 WOUND1_60_A03.g1_A002 Wounded leaves... 44 0.041
gb|CD224603.1|CD224603 CCC1_35_G10.b1_A007 Callus culture/c... 42 0.16
gb|CN151389.1|CN151389 WOUND1_75_D12.b1_A002 Wounded leaves... 42 0.16
>gb|CN134823.1|CN134823 OX1_28_E10.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E10_A002 5', mRNA sequence
Length = 706
Score = 1118 bits (564), Expect = 0.0
Identities = 669/704 (95%)
Strand = Plus / Minus
Query: 445 atgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttgg 504
||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 706 atgttgacatcatgcagggtggtctcctcacactggtccagctccatgtctgacagttgg 647
Query: 505 ctccctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcaca 564
|||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 646 ctccctggtttcggtggaaggatcttctccaatgatcggcactgggcagtggagagcaca 587
Query: 565 ccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacgg 624
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ccaggctcaggaaactcgacgttgaattcaacaaacagacgacccttcatgaaaggacgc 527
Query: 625 ccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacctcc 684
||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccatgctgaggcataccctcgtcattaatggccttgtgttgacctggtttaataacctcc 467
Query: 685 ccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactggaag 744
|| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 466 ccagggttagatttgatcagaagctgccggccatcaagatgagtaagaacaaactggaag 407
Query: 745 ccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatcctc 804
||||||| ||| || ||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 406 ccacacagtgcctcagtgagagagattgtgtgctcaacatataagtcatcatacttcctc 347
Query: 805 ttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatca 864
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttaaactttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgtatca 287
Query: 865 ggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctcc 924
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 286 ggagcttcatcagcttgaccctggaatacaatcttttggctatgttgcattcctttctcc 227
Query: 925 acatgaacctctaacaccttcttctcctggactaccttgtttcctttacagcttgggcat 984
||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 226 acatgaacctccaagaccttcttctcctggactaccttgcttcctttacagcttgggcat 167
Query: 985 ttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatc 1044
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttatccttgtcacttatgatctcgcctgatcctttgcattcagggcaaacagtgttcatc 107
Query: 1045 tgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaa 1104
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 106 tgttggatcatgccagggcctatctgtcttgtgattgtcctcattccagcaccacggcaa 47
Query: 1105 ccatggcatgttcctgatgccccactcttggatcctttcccctt 1148
|||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 46 ccatggcaagttcctgatgccccactcttggatcctttaccctt 3
>gb|CD431243.1|CD431243 ETH1_7_C11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_7_C11_A002 5', mRNA sequence
Length = 790
Score = 1067 bits (538), Expect = 0.0
Identities = 627/656 (95%), Gaps = 3/656 (0%)
Strand = Plus / Minus
Query: 971 tacagcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggc 1030
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 790 tacagcttgggcatttatccttgtcacttatgatctcgcctgatcctttgcattcagggc 731
Query: 1031 aaacagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattc 1090
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 730 aaacagtgttcatctgttggatcatgccagggcctatctgtcttgtgattgtcctcattc 671
Query: 1091 cagcaccacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgc 1150
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 670 cagcaccacggcaaccatggcaagttcctgatgccccactcttggatcctttacccttac 611
Query: 1151 acttggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagat 1210
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 610 acttggagcacaaagcactccgcgataaagatagtttcttggttgtcccgttatacagat 551
Query: 1211 cgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctc 1270
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 550 cttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctc 491
Query: 1271 ttgagctaccacccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaag 1330
|||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 490 ttgagccaccacc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatg 434
Query: 1331 ggctatggaaatcactgctgctgcctcctcccattccttccttaagggcatcttctccat 1390
||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 433 ggctatggaaatcactgctgccgccgcctcccattccctccttaagggcatcttctccat 374
Query: 1391 actggtcatagatctccctcttctccgggtcactaagaacatcataagcttgagacagct 1450
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||
Sbjct: 373 actggtcatagatctccctcttctctgggtcgctaagaacatcataagcttgagacaact 314
Query: 1451 ctttaaacttctcagggtctccacccttatcaggatggttttttatggcagcttttctgt 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctttaaacttctcagggtctccacccttatcaggatggttttttatggcagcttttctgt 254
Query: 1511 atgctttcttaagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatact 1570
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atgctttctttagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatact 194
Query: 1571 tggtattgttactactcttccttggcatgcgtccaaacatggttgataataggtac 1626
||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 193 tggtattgttactgctcttccttggcatgcgtccaaacatggctgatagtaggtac 138
>gb|CN139079.1|CN139079 OX1_15_H02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_15_H02_A002 5', mRNA sequence
Length = 719
Score = 1049 bits (529), Expect = 0.0
Identities = 618/647 (95%), Gaps = 3/647 (0%)
Strand = Plus / Minus
Query: 980 ggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgt 1039
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 719 ggcatttatccttgtcacttatgatctcgcctgatcctttgcattcagggcaaacagtgt 660
Query: 1040 tcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccac 1099
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 659 tcatctgttggatcatgccagggcctatctgtcttgtgattgtcctcattccagcaccac 600
Query: 1100 gacaaccatggcatgttcctgatgccccactcttggatcctttccccttgcacttggagc 1159
| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 599 ggcaaccatggcaagttcctgatgccccactcttggatcctttacccttacacttggagc 540
Query: 1160 acaaagcactccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaagg 1219
|||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 539 acaaagcactccgcgataaagatagtttcttggttgtcccgttatacagatcttctaagg 480
Query: 1220 aaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctac 1279
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 479 aaaccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccac 420
Query: 1280 cacccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatgga 1339
|||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 419 cacc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatgga 363
Query: 1340 aatcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcat 1399
|||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 362 aatcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcat 303
Query: 1400 agatctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaact 1459
|||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 302 agatctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaact 243
Query: 1460 tctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttct 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttct 183
Query: 1520 taagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgt 1579
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgt 123
Query: 1580 tactactcttccttggcatgcgtccaaacatggttgataataggtac 1626
|||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 122 tactgctcttccttggcatgcgtccaaacatggctgatagtaggtac 76
>gb|CX618468.1|CX618468 GABR1_39_G02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_39_G02_A002 5', mRNA sequence
Length = 756
Score = 1035 bits (522), Expect = 0.0
Identities = 608/636 (95%), Gaps = 3/636 (0%)
Strand = Plus / Minus
Query: 991 ttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttgg 1050
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttgtcacttatgatctcgcctgatcctttgcattcagggcaaacagtgttcatctgttgg 697
Query: 1051 atcatgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatgg 1110
||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 696 atcatgccagggcctatctgtcttgtgattgtcctcattccagcaccacggcaaccatgg 637
Query: 1111 catgttcctgatgccccactcttggatcctttccccttgcacttggagcacaaagcactc 1170
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 636 caagttcctgatgccccactcttggatcctttacccttacacttggagcacaaagcactc 577
Query: 1171 cgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcata 1230
||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 576 cgcgataaagatagtttcttggttgtcccgttatacagatcttctaaggaaaccttcata 517
Query: 1231 gtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaag 1290
||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 516 gtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccaccacc---aaag 460
Query: 1291 gtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctg 1350
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 459 ccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctg 400
Query: 1351 ctgcctcctcccattccttccttaagggcatcttctccatactggtcatagatctccctc 1410
| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccgccgcctcccattccctccttaagggcatcttctccatactggtcatagatctccctc 340
Query: 1411 ttctccgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggtct 1470
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 339 ttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttctcagggtct 280
Query: 1471 ccacccttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcc 1530
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 279 ccacccttatcaggatggttttttatggcagcttttctgtatgctttctttagctcatcc 220
Query: 1531 tgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttc 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 219 tgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctcttc 160
Query: 1591 cttggcatgcgtccaaacatggttgataataggtac 1626
|||||||||||||||||||||| ||||| |||||||
Sbjct: 159 cttggcatgcgtccaaacatggctgatagtaggtac 124
>gb|CF482537.1|CF482537 POL1_7_C08.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_7_C08_A002
5', mRNA sequence
Length = 748
Score = 1029 bits (519), Expect = 0.0
Identities = 605/633 (95%), Gaps = 3/633 (0%)
Strand = Plus / Minus
Query: 994 tcacttatgatctcacctgatcctttgcattcagggcaaacagtgttcatctgttggatc 1053
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tcacttatgatctcgcctgatcctttgcattcagggcaaacagtgttcatctgttggatc 689
Query: 1054 atgccaaggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcat 1113
|||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 688 atgccagggcctatctgtcttgtgattgtcctcattccagcaccacggcaaccatggcaa 629
Query: 1114 gttcctgatgccccactcttggatcctttccccttgcacttggagcacaaagcactccgc 1173
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 628 gttcctgatgccccactcttggatcctttacccttacacttggagcacaaagcactccgc 569
Query: 1174 gataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagta 1233
|||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 568 gataaagatagtttcttggttgtcccgttatacagatcttctaaggaaaccttcatagta 509
Query: 1234 tgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaaggtg 1293
|| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct: 508 tgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccaccacc---aaagccg 452
Query: 1294 ctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctg 1353
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 451 ctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccg 392
Query: 1354 cctcctcccattccttccttaagggcatcttctccatactggtcatagatctccctcttc 1413
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ccgcctcccattccctccttaagggcatcttctccatactggtcatagatctccctcttc 332
Query: 1414 tccgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggtctcca 1473
|| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 331 tctgggtcgctaagaacatcataagcttgagacaactctttaaacttctcagggtctcca 272
Query: 1474 cccttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcctga 1533
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 271 cccttatcaggatggttttttatggcagcttttctgtatgctttctttagctcatcctga 212
Query: 1534 cttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttcctt 1593
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 211 cttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctcttcctt 152
Query: 1594 ggcatgcgtccaaacatggttgataataggtac 1626
||||||||||||||||||| ||||| |||||||
Sbjct: 151 ggcatgcgtccaaacatggctgatagtaggtac 119
>gb|CD203897.1|CD203897 HS1_2_F10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_F10_A012 5', mRNA sequence
Length = 677
Score = 894 bits (451), Expect = 0.0
Identities = 525/549 (95%), Gaps = 3/549 (0%)
Strand = Plus / Minus
Query: 1078 attgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactcttggat 1137
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 677 attgtcctcattccagcaccacggcaaccatggcaagttcctgatgccccactcttggat 618
Query: 1138 cctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 1197
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cctttacccttacacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 558
Query: 1198 ccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttt 1257
||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 ccattatacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttt 498
Query: 1258 tgtctgcgtcctcttgagctaccacccccaaaggtgctagaacccggaaaaagttgctca 1317
||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||
Sbjct: 497 tgtctgcgtcctcttgagccaccacc---aaagccgctagaacccggaaaaagttgctca 441
Query: 1318 aaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattccttccttaagg 1377
||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 440 aaaatgtcaaatgggctatggaaatcactgctgccgccgcctcccattccctccttaagg 381
Query: 1378 gcatcttctccatactggtcatagatctccctcttctccgggtcactaagaacatcataa 1437
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 380 gcatcttctccatactggtcatagatctccctcttctctgggtcgctaagaacatcataa 321
Query: 1438 gcttgagacagctctttaaacttctcagggtctccacccttatcaggatggttttttatg 1497
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcttgagacaactctttaaacttctcagggtctccacccttatcaggatggttttttatg 261
Query: 1498 gcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagacacaccaaga 1557
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcagcttttctgtatgctttctttagctcatcctgacttgcggtcttagacacaccaaga 201
Query: 1558 acctcgtaatacttggtattgttactactcttccttggcatgcgtccaaacatggttgat 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 200 acctcgtaatacttggtattgttactactcttccttggcatgcgtccaaacatggctgat 141
Query: 1618 aataggtac 1626
| |||||||
Sbjct: 140 agtaggtac 132
>gb|CX607123.1|CX607123 ANR1_6_G07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_G07_A002 5', mRNA sequence
Length = 713
Score = 888 bits (448), Expect = 0.0
Identities = 537/566 (94%), Gaps = 3/566 (0%)
Strand = Plus / Minus
Query: 1061 ggcctatctgtcttgtgattgttctcattccagcaccacgacaaccatggcatgttcctg 1120
||||||||||||| |||||||| ||||||||||||||||| |||||| |||| |||||||
Sbjct: 709 ggcctatctgtctcgtgattgtcctcattccagcaccacggcaaccacggcaagttcctg 650
Query: 1121 atgccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaag 1180
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 649 atgccccactcttggatcctttacccttacacttggagcacaaagcactccgcgataaag 590
Query: 1181 atagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacca 1240
||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||
Sbjct: 589 atagtttcttggttgtcccgttatacagatcttctaaggaaaccttcatagtatgtacca 530
Query: 1241 catcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaac 1300
||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||
Sbjct: 529 catcttcaccacgctttggtctgcgtcctcttgagccaccacc---aaagccgctagaac 473
Query: 1301 ccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctc 1360
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 472 ccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgccgcctc 413
Query: 1361 ccattccttccttaagggcatcttctccatactggtcatagatctccctcttctccgggt 1420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 412 ccattccctccttaagggcatcttctccatactggtcatagatctccctcttctctgggt 353
Query: 1421 cactaagaacatcataagcttgagacagctctttaaacttctcagggtctccacccttat 1480
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 352 cgctaagaacatcataagcttgagacaactctttaaacttctcagggtctccacccttat 293
Query: 1481 caggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcgg 1540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 292 caggatggttttttatggcagcttttctgtatgctttctttagctcatcctgacttgcgg 233
Query: 1541 tcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggcatgc 1600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 232 tcttagacacaccaagaacctcgtaatacttggtattgttactgctcttccttggcatgc 173
Query: 1601 gtccaaacatggttgataataggtac 1626
|||||||||||| ||||| |||||||
Sbjct: 172 gtccaaacatggctgatagtaggtac 147
>gb|BE357846.1|BE357846 DG1_22_F02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 710
Score = 846 bits (427), Expect = 0.0
Identities = 543/581 (93%), Gaps = 3/581 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 579 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 523
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 522 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 463
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 462 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 403
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 402 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 343
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 342 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 283
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttgat 701
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 282 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggttagatttgat 223
Query: 702 cagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggt 761
||||||||| || ||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 222 cagaagctgccggccatcaagatgagtaagaacaaactggaagccacacagtgcctcagt 163
Query: 762 gagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtc 821
||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||
Sbjct: 162 gagagagattgtgtgctcaacatataagtcatcatacttcctcttaaactttggatggtc 103
Query: 822 tttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttg 43
Query: 882 accctggaatacaatcttttggttatgttgcattcctttct 922
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 42 accctggaatacaatcttttggctatgttgcattcctttct 2
>gb|CD226896.1|CD226896 CCC1_48_F02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_48_F02_A007 5', mRNA sequence
Length = 655
Score = 846 bits (427), Expect = 0.0
Identities = 501/525 (95%), Gaps = 3/525 (0%)
Strand = Plus / Minus
Query: 1102 caaccatggcatgttcctgatgccccactcttggatcctttccccttgcacttggagcac 1161
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 652 caaccatggcaagttcctgatgccccactcttggatcctttacccttacacttggagcac 593
Query: 1162 aaagcactccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaa 1221
|||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 592 aaagcactccgcgataaagatagtttcttggttgtcccgttatacagatcttctaaggaa 533
Query: 1222 accttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctacca 1281
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 532 accttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccacca 473
Query: 1282 cccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaa 1341
|| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 472 cc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaa 416
Query: 1342 tcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcatag 1401
|||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 415 tcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcatag 356
Query: 1402 atctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttc 1461
|||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 355 atctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttc 296
Query: 1462 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctta 1521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttt 236
Query: 1522 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtta 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtta 176
Query: 1582 ctactcttccttggcatgcgtccaaacatggttgataataggtac 1626
|| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 175 ctgctcttccttggcatgcgtccaaacatggctgatagtaggtac 131
>gb|AW677511.1|AW677511 DG1_8_C06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 807 bits (407), Expect = 0.0
Identities = 488/515 (94%)
Strand = Plus / Minus
Query: 442 tctatgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagt 501
|||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 523 tctatgttgacatcatgcagggtggtctcctcacactggtccagctccatgtctgacagt 464
Query: 502 tggctccctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagc 561
||||||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||
Sbjct: 463 tggctccctggtttcggtggaaggatcttctccaatgatcggcactgggcagtggagagc 404
Query: 562 acaccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaagga 621
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 403 acaccaggctcaggaaactcgacgttgaattcaacaaacagacgacccttcatgaaagga 344
Query: 622 cggccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtttaataacc 681
|| ||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 343 cgcccatgctgaggcataccctcgtcattaatggccttgtgttgacctggtttaataacc 284
Query: 682 tccccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaacaaactgg 741
||||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 283 tccccagggttagatttgatcagaagctgccggccatcaagatgagtaagaacaaactgg 224
Query: 742 aagccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcatcgtacatc 801
|||||||||| ||| || ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 223 aagccacacagtgcctcagtgagagagattgtgtgctcaacatataagtcatcatacttc 164
Query: 802 ctcttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgta 861
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctcttaaactttggatggtctttaagttgcaagacaaaaacaatgtctcctgtaaccgta 104
Query: 862 tcaggagcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttc 921
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 103 tcaggagcttcatcagcttgaccctggaatacaatcttttggctatgttgcattcctttc 44
Query: 922 tccacatgaacctctaacaccttcttctcctggac 956
|||||||||||||| || |||||||||||||||||
Sbjct: 43 tccacatgaacctccaagaccttcttctcctggac 9
>gb|BE357781.1|BE357781 DG1_22_F02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 587
Score = 807 bits (407), Expect = 0.0
Identities = 478/501 (95%), Gaps = 3/501 (0%)
Strand = Plus / Minus
Query: 1126 ccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaagatagt 1185
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 587 ccactcttggatcctttacccttacacttggagcacaaagcactccgcgataaagatagt 528
Query: 1186 ttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatct 1245
|||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 527 ttcttggttgtcccgttatacagatcttctaaggaaaccttcatagtatgtaccacatct 468
Query: 1246 tcaccacgcttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaacccgga 1305
||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct: 467 tcaccacgcttttgtctgcgtcctcttgagccaccacc---aaagccgctagaacccgga 411
Query: 1306 aaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccatt 1365
||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 410 aaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgccgcctcccatt 351
Query: 1366 ccttccttaagggcatcttctccatactggtcatagatctccctcttctccgggtcacta 1425
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 350 ccctccttaagggcatcttctccatactggtcatagatctccctcttctctgggtcgcta 291
Query: 1426 agaacatcataagcttgagacagctctttaaacttctcagggtctccacccttatcagga 1485
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 290 agaacatcataagcttgagacaactctttaaacttctcagggtctccacccttatcagga 231
Query: 1486 tggttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtctta 1545
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 230 tggttttttatggcagcttttctgtatgctttctttagctcatcctgacttgcggtctta 171
Query: 1546 gacacaccaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtcca 1605
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 170 gacacaccaagaacctcgtaatacttggtattgttactgctcttccttggcatgcgtcca 111
Query: 1606 aacatggttgataataggtac 1626
||||||| ||||| |||||||
Sbjct: 110 aacatggctgatagtaggtac 90
>gb|CD233820.1|CD233820 SS1_4_C01.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_4_C01_A012 5', mRNA sequence
Length = 624
Score = 805 bits (406), Expect = 0.0
Identities = 474/496 (95%), Gaps = 3/496 (0%)
Strand = Plus / Minus
Query: 1131 cttggatcctttccccttgcacttggagcacaaagcactccgcgataaagatagtttctt 1190
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 624 cttggatcctttacccttacacttggagcacaaagcactccgcgataaagatagtctctt 565
Query: 1191 ggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcacc 1250
|||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 ggttgtcccattatacagatcttctaaggaaaccttcatagtatgtaccacatcttcacc 505
Query: 1251 acgcttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaacccggaaaaag 1310
|||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 504 acgcttttgtctgcgtcctcttgagccaccacc---aaagccgctagaacccggaaaaag 448
Query: 1311 ttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattccttc 1370
|||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||
Sbjct: 447 ttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgccgcctcccattccctc 388
Query: 1371 cttaagggcatcttctccatactggtcatagatctccctcttctccgggtcactaagaac 1430
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 387 cttaagggcatcttctccatactggtcatagatctccctcttctctgggtcgctaagaac 328
Query: 1431 atcataagcttgagacagctctttaaacttctcagggtctccacccttatcaggatggtt 1490
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atcataagcttgagacaactctttaaacttctcagggtctccacccttatcaggatggtt 268
Query: 1491 ttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagacac 1550
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 267 ttttatggcagcttttctgtatgctttctttagctcatcctgacttgcggtcttagacac 208
Query: 1551 accaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaacat 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 accaagaacctcgtaatacttggtattgttactactcttccttggcatgcgtccaaacat 148
Query: 1611 ggttgataataggtac 1626
|| ||||| |||||||
Sbjct: 147 ggctgatagtaggtac 132
>gb|CX616194.1|CX616194 GABR1_26_A10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_26_A10_A002 5', mRNA sequence
Length = 625
Score = 801 bits (404), Expect = 0.0
Identities = 481/506 (95%), Gaps = 3/506 (0%)
Strand = Plus / Minus
Query: 1121 atgccccactcttggatcctttccccttgcacttggagcacaaagcactccgcgataaag 1180
|||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||
Sbjct: 625 atgccccactcttggatcctttacctttacacttagagcacaaagcactccgcgataaag 566
Query: 1181 atagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacca 1240
||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||
Sbjct: 565 atagtttcttggttgtcccgttatacagatcttctaaggaaaccttcatagtatgtacca 506
Query: 1241 catcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaac 1300
|||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||
Sbjct: 505 catcttcaccacgcttttgtctgcgtcctcttgagccaccacc---aaagccgctagaac 449
Query: 1301 ccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctc 1360
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 448 ccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgccgcctc 389
Query: 1361 ccattccttccttaagggcatcttctccatactggtcatagatctccctcttctccgggt 1420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 388 ccattccctccttaagggcatcttctccatactggtcatagatctccctcttctctgggt 329
Query: 1421 cactaagaacatcataagcttgagacagctctttaaacttctcagggtctccacccttat 1480
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 328 cgctaagaacatcataagcttgagacaactctttaaacttctcagggtctccacccttat 269
Query: 1481 caggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcgg 1540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 268 caggatggttttttatggcagcttttctgtatgctttctttagctcatcctgacttgcgg 209
Query: 1541 tcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggcatgc 1600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 208 tcttagacacaccaagaacctcgtaatacttggtattgttactgctcttccttggcatgc 149
Query: 1601 gtccaaacatggttgataataggtac 1626
|||||||||||| ||||| |||||||
Sbjct: 148 gtccaaacatggctgatagtaggtac 123
>gb|CD207745.1|CD207745 HS1_34_H03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_34_H03_A012 5', mRNA sequence
Length = 618
Score = 795 bits (401), Expect = 0.0
Identities = 463/483 (95%), Gaps = 3/483 (0%)
Strand = Plus / Minus
Query: 1144 cccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtcccattg 1203
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cccttacacttggagcacaaagcactccgcgataaagatagtttcttggttgtcccatta 552
Query: 1204 tacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctg 1263
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 551 tacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttttgtctg 492
Query: 1264 cgtcctcttgagctaccacccccaaaggtgctagaacccggaaaaagttgctcaaaaatg 1323
||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 491 cgtcctcttgagccaccacc---aaagccgctagaacccggaaaaagttgctcaaaaatg 435
Query: 1324 tcaaaagggctatggaaatcactgctgctgcctcctcccattccttccttaagggcatct 1383
||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 434 tcaaatgggctatggaaatcactgctgccgccgcctcccattccctccttaagggcatct 375
Query: 1384 tctccatactggtcatagatctccctcttctccgggtcactaagaacatcataagcttga 1443
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 374 tctccatactggtcatagatctccctcttctctgggtcgctaagaacatcataagcttga 315
Query: 1444 gacagctctttaaacttctcagggtctccacccttatcaggatggttttttatggcagct 1503
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gacaactctttaaacttctcagggtctccacccttatcaggatggttttttatggcagct 255
Query: 1504 tttctgtatgctttcttaagctcatcctgacttgcggtcttagacacaccaagaacctcg 1563
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttctgtatgctttctttagctcatcctgacttgcggtcttagacacaccaagaacctcg 195
Query: 1564 taatacttggtattgttactactcttccttggcatgcgtccaaacatggttgataatagg 1623
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 194 taatacttggtattgttactactcttccttggcatgcgtccaaacatggctgatagtagg 135
Query: 1624 tac 1626
|||
Sbjct: 134 tac 132
>gb|CN138990.1|CN138990 OX1_15_H02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_15_H02_A002 3', mRNA sequence
Length = 802
Score = 783 bits (395), Expect = 0.0
Identities = 508/545 (93%), Gaps = 3/545 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 542 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 486
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 485 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 426
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 425 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 366
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 365 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 306
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 246
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttgat 701
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 245 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggttagatttgat 186
Query: 702 cagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggt 761
||||||||| || ||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 185 cagaagctgccggccatcaagatgagtaagaacaaactggaagccacacagtgcctcagt 126
Query: 762 gagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtc 821
||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||
Sbjct: 125 gagagagattgtgtgctcaacatataagtcatcatacttcctcttaaactttggatggtc 66
Query: 822 tttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tttaagttgcaagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttg 6
Query: 882 accct 886
|||||
Sbjct: 5 accct 1
>gb|BG355756.2|BG355756 EM1_19_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 560
Score = 781 bits (394), Expect = 0.0
Identities = 465/488 (95%), Gaps = 3/488 (0%)
Strand = Plus / Minus
Query: 1139 ctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtcc 1198
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctttacccttacacttggagcacaaagcactccgcgataaagatagtttcttggttgtcc 501
Query: 1199 cattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgctttt 1258
| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 cgttatacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacgctttt 441
Query: 1259 gtctgcgtcctcttgagctaccacccccaaaggtgctagaacccggaaaaagttgctcaa 1318
|||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 440 gtctgcgtcctcttgagccaccacc---aaagccgctagaacccggaaaaagttgctcaa 384
Query: 1319 aaatgtcaaaagggctatggaaatcactgctgctgcctcctcccattccttccttaaggg 1378
|||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 383 aaatgtcaaatgggctatggaaatcactgctgccgccgcctcccattccctccttaaggg 324
Query: 1379 catcttctccatactggtcatagatctccctcttctccgggtcactaagaacatcataag 1438
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 323 catcttctccatactggtcatagatctccctcttctctgggtcgctaagaacatcataag 264
Query: 1439 cttgagacagctctttaaacttctcagggtctccacccttatcaggatggttttttatgg 1498
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttgagacaactctttaaacttctcagggtctccacccttatcaggatggttttttatgg 204
Query: 1499 cagcttttctgtatgctttcttaagctcatcctgacttgcggtcttagacacaccaagaa 1558
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 cagcttttctgtatgctttctttagctcatcctgacttgcggtcttagacacaccaagaa 144
Query: 1559 cctcgtaatacttggtattgttactactcttccttggcatgcgtccaaacatggttgata 1618
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 143 cctcgtaatacttggtattgttactgctcttccttggcatgcgtccaaacatggctgata 84
Query: 1619 ataggtac 1626
|||||||
Sbjct: 83 gtaggtac 76
>gb|BE595237.1|BE595237 PI1_47_F04.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 493
Score = 749 bits (378), Expect = 0.0
Identities = 461/488 (94%), Gaps = 3/488 (0%)
Strand = Plus / Minus
Query: 971 tacagcttgggcatttgtccttgtcacttatgatctcacctgatcctttgcattcagggc 1030
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 493 tacagcttgggcatttatccttgtcacttatgatctcgcctgatcctttgcattcagggc 434
Query: 1031 aaacagtgttcatctgttggatcatgccaaggcctatctgtcttgtgattgttctcattc 1090
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 433 aaacagtgttcatctgttggatcatgccagggcctatctgtcttgtgattgtcctcattc 374
Query: 1091 cagcaccacgacaaccatggcatgttcctgatgccccactcttggatcctttccccttgc 1150
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 373 cagcaccacggcaaccatggcaagttcctgatgccccactcttggatcctttacccttac 314
Query: 1151 acttggagcacaaagcactccgcgataaagatagtttcttggttgtcccattgtacagat 1210
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 313 acttggagcacaaagcactccgcgataaagatagtttcttggttgtcccgttatacagat 254
Query: 1211 cgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctc 1270
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 253 cttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctc 194
Query: 1271 ttgagctaccacccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaag 1330
||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 193 ttgag---ccaccaccaaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatg 137
Query: 1331 ggctatggaaatcactgctgctgcctcctcccattccttccttaagggcatcttctccat 1390
||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 136 ggctatggaaatcactgctgccgccgcctcccattccctccttaagggcatcttctccat 77
Query: 1391 actggtcatagatctccctcttctccgggtcactaagaacatcataagcttgagacagct 1450
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||
Sbjct: 76 actggtcatagatctccctcttctatgggtcgataagaacatcataagcttgagacaact 17
Query: 1451 ctttaaac 1458
||||||||
Sbjct: 16 ctttaaac 9
>gb|CX616359.1|CX616359 GABR1_27_A09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_A09_A002 5', mRNA sequence
Length = 577
Score = 737 bits (372), Expect = 0.0
Identities = 437/458 (95%), Gaps = 3/458 (0%)
Strand = Plus / Minus
Query: 1169 tccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaaccttca 1228
||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 577 tccgcgataaagatagtttcttggttgtcccgttatacagatcttctaaggaaaccttca 518
Query: 1229 tagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaa 1288
||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 517 tagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccaccacc---aa 461
Query: 1289 aggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgc 1348
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 460 agccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgc 401
Query: 1349 tgctgcctcctcccattccttccttaagggcatcttctccatactggtcatagatctccc 1408
||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgccgccgcctcccattccctccttaagggcatcttctccatactggtcatagatctccc 341
Query: 1409 tcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggt 1468
||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 340 tcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttctcagggt 281
Query: 1469 ctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcat 1528
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 280 ctccacccttatcaggatggttttttatggcagcttttctgtatgctttctttagctcat 221
Query: 1529 cctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactct 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 220 cctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctct 161
Query: 1589 tccttggcatgcgtccaaacatggttgataataggtac 1626
|||||||||||||||||||||||| ||||| |||||||
Sbjct: 160 tccttggcatgcgtccaaacatggctgatagtaggtac 123
>gb|CD214179.1|CD214179 HS1_70_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_70_G11_A012 5', mRNA sequence
Length = 563
Score = 729 bits (368), Expect = 0.0
Identities = 427/446 (95%), Gaps = 3/446 (0%)
Strand = Plus / Minus
Query: 1181 atagtttcttggttgtcccattgtacagatcgtctaaggaaaccttcatagtatgcacca 1240
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||
Sbjct: 563 atagtttcttggttgtcccattatacagatcttctaaggaaaccttcatagtatgtacca 504
Query: 1241 catcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaac 1300
|||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||
Sbjct: 503 catcttcaccacgcttttgtctgcgtcctcttgagccaccacc---aaagccgctagaac 447
Query: 1301 ccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcctcctc 1360
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 446 ccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgccgcctc 387
Query: 1361 ccattccttccttaagggcatcttctccatactggtcatagatctccctcttctccgggt 1420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 386 ccattccctccttaagggcatcttctccatactggtcatagatctccctcttctctgggt 327
Query: 1421 cactaagaacatcataagcttgagacagctctttaaacttctcagggtctccacccttat 1480
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 326 cgctaagaacatcataagcttgagacaactctttaaacttctcagggtctccacccttat 267
Query: 1481 caggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgacttgcgg 1540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 266 caggatggttttttatggcagcttttctgtatgctttctttagctcatcctgacttgcgg 207
Query: 1541 tcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggcatgc 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttggcatgc 147
Query: 1601 gtccaaacatggttgataataggtac 1626
|||||||||||| ||||| |||||||
Sbjct: 146 gtccaaacatggctgatagtaggtac 121
>gb|CD203870.1|CD203870 HS1_2_F10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_F10_A012 3', mRNA sequence
Length = 661
Score = 716 bits (361), Expect = 0.0
Identities = 543/600 (90%), Gaps = 9/600 (1%)
Strand = Plus / Minus
Query: 257 atttttgccaaaaa-gaatcgagatgatcagatggataaaaaatcctgctgaaacttttg 315
|||||||||||||| |||||||||||||| |||||||||| |||||| |||| ||| |
Sbjct: 594 atttttgccaaaaaagaatcgagatgatcggatggataaa---tcctgcggaaattttgg 538
Query: 316 gagaacagt--tccaacgaacacggattttactgctgggcacattgcacccttggttgag 373
|| |||||| || | ||| | || |||||||||||||||| ||||||||||| ||
Sbjct: 537 gacaacagtgttctgataaacccaaatcttactgctgggcacatcgcacccttggtccag 478
Query: 374 catcctcgtcgtcgtcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctca 433
| ||||| ||||| || |||| ||||||||||| | |||||||||||||||||||||
Sbjct: 477 cctcctcctcgtcctcatcat---aggcttcctgccgcctctgctgctgcctgcgcctca 421
Query: 434 tctcctcttctatgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgt 493
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 420 tctcctcttctatgttgacatcatgcagggtggtctcctcacactggtccagctccatgt 361
Query: 494 ccgacagttggctccctggtttcggcggaaggatcttctccaacgaacggcactgggcag 553
| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 360 ctgacagttggctccctggtttcggtggaaggatcttctccaatgatcggcactgggcag 301
Query: 554 gggagagcacaccaggctcgggaaactccacgttgaattcaacaaacagacgacccttca 613
||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 300 tggagagcacaccaagctcaggaaactcgacgttgaattcaacaaacagacgacccttca 241
Query: 614 tgaaaggacggccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtt 673
|||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 240 tgaaaggacgcccatgctgaggcataccctcgtcattaatggccttgtgttgacctggtt 181
Query: 674 taataacctccccggggtcagatttgatcagaagctgtcgcccatcaagatgagtaagaa 733
||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||
Sbjct: 180 taataacctccccagggttagatttgatcagaagctgccggccatcaagatgagtaagaa 121
Query: 734 caaactggaagccacacaatgcttcggtgagagagattgtgtgctcaacatataagtcat 793
|||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||
Sbjct: 120 caaactggaagccacacagtgcctcagtgagagagattgtgtgctcaacatataagtcat 61
Query: 794 cgtacatcctcttaaattttggatggtctttaagttgcaagacaaaaacaatgtctcctg 853
| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 catacttcctcttaaactttggatggtctttaagttgcaagacaaaaacaatgtctcctg 1
>gb|CN134748.1|CN134748 OX1_28_E10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E10_A002 3', mRNA sequence
Length = 803
Score = 710 bits (358), Expect = 0.0
Identities = 471/508 (92%), Gaps = 3/508 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 505 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 449
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 448 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 389
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 388 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 329
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 328 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 269
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 268 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 209
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttgat 701
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 208 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggttagatttgat 149
Query: 702 cagaagctgtcgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggt 761
||||||||| || ||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 148 cagaagctgccggccatcaagatgagtaagaacaaactggaagccacacagtgcctcagt 89
Query: 762 gagagagattgtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtc 821
||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||
Sbjct: 88 gagagagattgtgtgctcaacatataagtcatcatacttcctcttaaactttggatggtc 29
Query: 822 tttaagttgcaagacaaaaacaatgtct 849
||||||||||||||||||||||||||||
Sbjct: 28 tttaagttgcaagacaaaaacaatgtct 1
>gb|BE125875.1|BE125875 DG1_59_A11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 706 bits (356), Expect = 0.0
Identities = 434/458 (94%), Gaps = 4/458 (0%)
Strand = Plus / Minus
Query: 894 aatcttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcctg 953
|||||||||| ||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct: 476 aatcttttggctatgttgcattcctttctccacatgaacctccaagac-ttcttctcctg 418
Query: 954 gactaccttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacctga 1013
|||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 417 gactaccttgcttcctttacagcttgggcatttatccttgtcacttatgatctcgcctga 358
Query: 1014 tcctttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgtct 1073
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 357 tcctttgcattcagggcaaacagtgttcatctgttggatcatgccagggcctatctgtct 298
Query: 1074 tgtgattgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactctt 1133
||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 297 tgtgattgtcctcattccagcaccacggcaaccatggcaagttcctgatgccccactctt 238
Query: 1134 ggatcctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggt 1193
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggatcctttacccttacacttggagcacaaagcactccgcgataaagatagtttcttggt 178
Query: 1194 tgtcccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacg 1253
|||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 177 tgtcccgttatacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacg 118
Query: 1254 cttttgtctgcgtcctcttgagctaccacccccaaaggtgctagaacccggaaaaagttg 1313
|||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 117 cttttgtctgcgtcctcttgag---ccaccaccaaagccgctagaacccggaaaaagttg 61
Query: 1314 ctcaaaaatgtcaaaagggctatggaaatcactgctgc 1351
||||||||||||||| ||||||||||||||||||||||
Sbjct: 60 ctcaaaaatgtcaaatgggctatggaaatcactgctgc 23
>gb|BG463465.1|BG463465 EM1_49_H03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 428
Score = 676 bits (341), Expect = 0.0
Identities = 409/431 (94%), Gaps = 3/431 (0%)
Strand = Plus / Minus
Query: 983 atttgtccttgtcacttatgatctcacctgatcctttgcattcagggcaaacagtgttca 1042
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 428 atttatccttgtcacttatgatctcgcctgatcctttgcattcagggcaaacagtgttca 369
Query: 1043 tctgttggatcatgccaaggcctatctgtcttgtgattgttctcattccagcaccacgac 1102
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 368 tctgttggatcatgccagggcctatctgtcttgtgattgtcctcattccagcaccacggc 309
Query: 1103 aaccatggcatgttcctgatgccccactcttggatcctttccccttgcacttggagcaca 1162
|||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 308 aaccatggcaagttcctgatgccccactcttggatcctttacccttacacttggagcaca 249
Query: 1163 aagcactccgcgataaagatagtttcttggttgtcccattgtacagatcgtctaaggaaa 1222
||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 248 aagcactccgcgataaagatagtttcttggttgtcccgttatacagatcttctaaggaaa 189
Query: 1223 ccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccac 1282
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 188 ccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgag---ccac 132
Query: 1283 ccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaat 1342
| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 131 caccaaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaat 72
Query: 1343 cactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcataga 1402
||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 71 cactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcataga 12
Query: 1403 tctccctcttc 1413
|||||||||||
Sbjct: 11 tctccctcttc 1
>gb|BE592605.1|BE592605 WS1_95_F07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 666 bits (336), Expect = 0.0
Identities = 392/410 (95%), Gaps = 3/410 (0%)
Strand = Plus / Minus
Query: 1217 aggaaaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagc 1276
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aggaaaccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagc 462
Query: 1277 taccacccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctat 1336
|||||| |||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 461 caccacc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctat 405
Query: 1337 ggaaatcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggt 1396
||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 404 ggaaatcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggt 345
Query: 1397 catagatctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaa 1456
||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 344 catagatctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaa 285
Query: 1457 acttctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctt 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acttctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctt 225
Query: 1517 tcttaagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtat 1576
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tctttagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtat 165
Query: 1577 tgttactactcttccttggcatgcgtccaaacatggttgataataggtac 1626
||||||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 164 tgttactgctcttccttggcatgcgtccaaacatggctgatagtaggtac 115
>gb|BG322500.1|BG322500 EM1_28_G05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 520
Score = 658 bits (332), Expect = 0.0
Identities = 388/406 (95%), Gaps = 3/406 (0%)
Strand = Plus / Minus
Query: 1221 aaccttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctacc 1280
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 520 aaccttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccacc 461
Query: 1281 acccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaa 1340
||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 460 acc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaa 404
Query: 1341 atcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcata 1400
||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 403 atcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcata 344
Query: 1401 gatctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaactt 1460
||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 343 gatctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaactt 284
Query: 1461 ctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctt 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctt 224
Query: 1521 aagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtt 1580
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtt 164
Query: 1581 actactcttccttggcatgcgtccaaacatggttgataataggtac 1626
||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 163 actgctcttccttggcatgcgtccaaacatggctgatagtaggtac 118
>gb|BG356240.1|BG356240 EM1_23_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 477
Score = 656 bits (331), Expect = 0.0
Identities = 387/405 (95%), Gaps = 3/405 (0%)
Strand = Plus / Minus
Query: 1222 accttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctacca 1281
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 477 accttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccacca 418
Query: 1282 cccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaa 1341
|| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 417 cc---aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaa 361
Query: 1342 tcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcatag 1401
|||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 360 tcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcatag 301
Query: 1402 atctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttc 1461
|||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 300 atctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttc 241
Query: 1462 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctta 1521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttt 181
Query: 1522 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtta 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtta 121
Query: 1582 ctactcttccttggcatgcgtccaaacatggttgataataggtac 1626
|| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 120 ctgctcttccttggcatgcgtccaaacatggctgatagtaggtac 76
>gb|BG948568.1|BG948568 IP1_11_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 650 bits (328), Expect = 0.0
Identities = 384/402 (95%), Gaps = 3/402 (0%)
Strand = Plus / Minus
Query: 1225 ttcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccaccc 1284
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 527 ttcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccaccacc- 469
Query: 1285 ccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatca 1344
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 468 --aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatca 411
Query: 1345 ctgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcatagatc 1404
||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcatagatc 351
Query: 1405 tccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttctca 1464
||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 350 tccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttctca 291
Query: 1465 gggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttaagc 1524
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 290 gggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctttagc 231
Query: 1525 tcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttacta 1584
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactg 171
Query: 1585 ctcttccttggcatgcgtccaaacatggttgataataggtac 1626
|||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 170 ctcttccttggcatgcgtccaaacatggctgatagtaggtac 129
>gb|BM322562.1|BM322562 PIC1_6_D07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 403
Score = 650 bits (328), Expect = 0.0
Identities = 378/395 (95%)
Strand = Plus / Minus
Query: 652 atggccttgtgttgacctggtttaataacctccccggggtcagatttgatcagaagctgt 711
||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 403 atggccttgtgttgacctggtttaataacctccncagggttagatttgatcagaagctgc 344
Query: 712 cgcccatcaagatgagtaagaacaaactggaagccacacaatgcttcggtgagagagatt 771
|| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 343 cggccatcaagatgagtaagaacaaactggaagccacacagtgcctcagtgagagagatt 284
Query: 772 gtgtgctcaacatataagtcatcgtacatcctcttaaattttggatggtctttaagttgc 831
||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 283 gtgtgctcaacatataagtcatcatacttcctcttaaactttggatggtctttaagttgc 224
Query: 832 aagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgaccctggaat 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aagacaaaaacaatgtctcctgtaaccgtatcaggagcttcatcagcttgaccctggaat 164
Query: 892 acaatcttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcc 951
|||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 163 acaatcttttggctatgttgcattcctttctccacatgaacctccaagaccttcttctcc 104
Query: 952 tggactaccttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacct 1011
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 103 tggactaccttgcttcctttacagcttgggcatttatccttgtcacttatgatctcgcct 44
Query: 1012 gatcctttgcattcagggcaaacagtgttcatctg 1046
|||||||||||||||||||||||||||||||||||
Sbjct: 43 gatcctttgcattcagggcaaacagtgttcatctg 9
>gb|BG556582.1|BG556582 EM1_37_A09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 513
Score = 648 bits (327), Expect = 0.0
Identities = 383/401 (95%), Gaps = 3/401 (0%)
Strand = Plus / Minus
Query: 1226 tcatagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccc 1285
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 513 tcatagtatgtaccacatcttcaccacgcttttgtctgcgtcctcttgagccaccacc-- 456
Query: 1286 caaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcac 1345
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 455 -aaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcac 397
Query: 1346 tgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcatagatct 1405
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgctgccgccgcctcccattccctccttaagggcatcttctccatactggtcatagatct 337
Query: 1406 ccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttctcag 1465
|||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 336 ccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttctcag 277
Query: 1466 ggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttaagct 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 276 ggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctttagct 217
Query: 1526 catcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactac 1585
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 216 catcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgc 157
Query: 1586 tcttccttggcatgcgtccaaacatggttgataataggtac 1626
||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 156 tcttccttggcatgcgtccaaacatggctgatagtaggtac 116
>gb|AW287128.2|AW287128 LG1_265_H04.b2_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 390
Score = 624 bits (315), Expect = e-177
Identities = 363/379 (95%)
Strand = Plus / Minus
Query: 898 ttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcctggact 957
|||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 390 ttttggctatgttgcattcctttctccacatgaacctccaagaccttcttctcctggact 331
Query: 958 accttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacctgatcct 1017
|||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 330 accttgcttcctttacagcttgggcatttatccttgtcacttatgatctcgcctgatcct 271
Query: 1018 ttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgtcttgtg 1077
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 270 ttgcattcagggcaaacagtgttcatctgttggatcatgccagggcctatctgtcttgtg 211
Query: 1078 attgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactcttggat 1137
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 210 attgtcctcattccagcaccacggcaaccatggcaagttcctgatgccccactcttggat 151
Query: 1138 cctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 1197
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cctttacccttacacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 91
Query: 1198 ccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttt 1257
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 90 ccgttatacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttt 31
Query: 1258 tgtctgcgtcctcttgagc 1276
|||||||||||||||||||
Sbjct: 30 tgtctgcgtcctcttgagc 12
>gb|AW287131.2|AW287131 LG1_265_H07.b2_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 390
Score = 624 bits (315), Expect = e-177
Identities = 363/379 (95%)
Strand = Plus / Minus
Query: 898 ttttggttatgttgcattcctttctccacatgaacctctaacaccttcttctcctggact 957
|||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 390 ttttggctatgttgcattcctttctccacatgaacctccaagaccttcttctcctggact 331
Query: 958 accttgtttcctttacagcttgggcatttgtccttgtcacttatgatctcacctgatcct 1017
|||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 330 accttgcttcctttacagcttgggcatttatccttgtcacttatgatctcgcctgatcct 271
Query: 1018 ttgcattcagggcaaacagtgttcatctgttggatcatgccaaggcctatctgtcttgtg 1077
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 270 ttgcattcagggcaaacagtgttcatctgttggatcatgccagggcctatctgtcttgtg 211
Query: 1078 attgttctcattccagcaccacgacaaccatggcatgttcctgatgccccactcttggat 1137
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 210 attgtcctcattccagcaccacggcaaccatggcaagttcctgatgccccactcttggat 151
Query: 1138 cctttccccttgcacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 1197
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cctttacccttacacttggagcacaaagcactccgcgataaagatagtttcttggttgtc 91
Query: 1198 ccattgtacagatcgtctaaggaaaccttcatagtatgcaccacatcttcaccacgcttt 1257
|| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 90 ccgttatacagatcttctaaggaaaccttcatagtatgtaccacatcttcaccacgcttt 31
Query: 1258 tgtctgcgtcctcttgagc 1276
|||||||||||||||||||
Sbjct: 30 tgtctgcgtcctcttgagc 12
>gb|BE592606.1|BE592606 WS1_95_F08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 509
Score = 579 bits (292), Expect = e-163
Identities = 372/398 (93%), Gaps = 3/398 (0%)
Strand = Plus / Minus
Query: 1229 tagtatgcaccacatcttcaccacgcttttgtctgcgtcctcttgagctaccacccccaa 1288
||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||| ||
Sbjct: 509 tagtatgtaccacatcttcgccacgcttttgtgtgcgtcctcttgagccaccacc---aa 453
Query: 1289 aggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgc 1348
|| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 452 agccgctagaacccggaaaaagttgctccaaaatgtcaaatgggctatggaaatcactgc 393
Query: 1349 tgctgcctcctcccattccttccttaagggcatcttctccatactggtcatagatctccc 1408
||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 392 tgccgccgcctcccattccctccttaagggcatcttctccatactggtcacagatctccc 333
Query: 1409 tcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggt 1468
||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 332 tcttctctgggtcgctaagaacatcataagcttgacacaactctttaaacttctcagggt 273
Query: 1469 ctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcat 1528
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 272 ctccacccttatcaggatggttttttatggcagcttttctgtatgctttctttagctcat 213
Query: 1529 cctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactct 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 212 cctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctct 153
Query: 1589 tccttggcatgcgtccaaacatggttgataataggtac 1626
||||||||| | |||| ||||||| ||||| |||||||
Sbjct: 152 tccttggcacgtgtcccaacatggctgatagtaggtac 115
>gb|BM324169.1|BM324169 PIC1_25_D02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 451
Score = 579 bits (292), Expect = e-163
Identities = 334/348 (95%)
Strand = Plus / Minus
Query: 1279 ccacccccaaaggtgctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatgg 1338
||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 444 ccaccaccaaagccgctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatgg 385
Query: 1339 aaatcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtca 1398
||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 aaatcactgctgccgccgcctcccattccctccttaagggcatcttctccatactggtca 325
Query: 1399 tagatctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaac 1458
||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 324 tagatctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaac 265
Query: 1459 ttctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttc 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttctcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttc 205
Query: 1519 ttaagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattg 1578
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tttagctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattg 145
Query: 1579 ttactactcttccttggcatgcgtccaaacatggttgataataggtac 1626
||||| |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 144 ttactgctcttccttggcatgcgtccaaacatggctgatagtaggtac 97
>gb|BG560235.1|BG560235 RHIZ2_71_G03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 470
Score = 575 bits (290), Expect = e-162
Identities = 323/334 (96%)
Strand = Plus / Minus
Query: 1293 gctagaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgct 1352
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 464 gctagaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgcc 405
Query: 1353 gcctcctcccattccttccttaagggcatcttctccatactggtcatagatctccctctt 1412
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gccgcctcccattccctccttaagggcatcttctccatactggtcatagatctccctctt 345
Query: 1413 ctccgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggtctcc 1472
||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 ctctgggtcgctaagaacatcataagcttgagacaactctttaaacttctcagggtctcc 285
Query: 1473 acccttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcctg 1532
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 284 acccttatcaggatggttttttatggcagcttttctgtatgctttctttagctcatcctg 225
Query: 1533 acttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttcct 1592
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 224 acttgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctcttcct 165
Query: 1593 tggcatgcgtccaaacatggttgataataggtac 1626
|||||||||||||||||||| ||||| |||||||
Sbjct: 164 tggcatgcgtccaaacatggctgatagtaggtac 131
>gb|AW677356.1|AW677356 DG1_6_F08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 569 bits (287), Expect = e-160
Identities = 320/331 (96%)
Strand = Plus / Minus
Query: 1296 agaacccggaaaaagttgctcaaaaatgtcaaaagggctatggaaatcactgctgctgcc 1355
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 448 agaacccggaaaaagttgctcaaaaatgtcaaatgggctatggaaatcactgctgccgcc 389
Query: 1356 tcctcccattccttccttaagggcatcttctccatactggtcatagatctccctcttctc 1415
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gcctcccattccctccttaagggcatcttctccatactggtcatagatctccctcttctc 329
Query: 1416 cgggtcactaagaacatcataagcttgagacagctctttaaacttctcagggtctccacc 1475
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 328 tgggtcgctaagaacatcataagcttgagacaactctttaaacttctcagggtctccacc 269
Query: 1476 cttatcaggatggttttttatggcagcttttctgtatgctttcttaagctcatcctgact 1535
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 cttatcaggatggttttttatggcagcttttctgtatgctttctttagctcatcctgact 209
Query: 1536 tgcggtcttagacacaccaagaacctcgtaatacttggtattgttactactcttccttgg 1595
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 208 tgcggtcttagacacaccaagaacctcgtaatacttggtattgttactgctcttccttgg 149
Query: 1596 catgcgtccaaacatggttgataataggtac 1626
||||||||||||||||| ||||| |||||||
Sbjct: 148 catgcgtccaaacatggctgatagtaggtac 118
>gb|CF758836.1|CF758836 DSAF1_37_B09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_37_B09_A011 3', mRNA sequence
Length = 573
Score = 551 bits (278), Expect = e-155
Identities = 373/404 (92%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 401 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 345
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 344 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 285
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 284 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 225
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 224 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 165
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 164 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 105
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttgat 701
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 104 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggttagatttgat 45
Query: 702 cagaagctgtcgcccatcaagatgagtaagaacaaactggaagc 745
||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 44 cagaagctgccggccatcaagatgagtaagaacaaactggaagc 1
>gb|CD211472.1|CD211472 HS1_60_G08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_60_G08_A012 5', mRNA sequence
Length = 417
Score = 478 bits (241), Expect = e-133
Identities = 274/285 (96%)
Strand = Plus / Minus
Query: 1342 tcactgctgctgcctcctcccattccttccttaagggcatcttctccatactggtcatag 1401
|||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 417 tcactgctgccgccgcctcccattccctctttaagggcatcttctccatactggtcatag 358
Query: 1402 atctccctcttctccgggtcactaagaacatcataagcttgagacagctctttaaacttc 1461
|||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 357 atctccctcttctctgggtcgctaagaacatcataagcttgagacaactctttaaacttc 298
Query: 1462 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttctta 1521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcagggtctccacccttatcaggatggttttttatggcagcttttctgtatgctttcttt 238
Query: 1522 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtattgtta 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 237 agctcatcctgacttgcggtcttagacacaccaagaacctcgtaatacttggtatcgtta 178
Query: 1582 ctactcttccttggcatgcgtccaaacatggttgataataggtac 1626
||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 177 ctactcttccttggcatgcgtccaaacatggctgatagtaggtac 133
>gb|CX607033.1|CX607033 ANR1_6_G07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_G07_A002 3', mRNA sequence
Length = 740
Score = 474 bits (239), Expect = e-131
Identities = 331/361 (91%), Gaps = 3/361 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 358 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 302
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 301 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 242
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 241 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 182
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 181 aaggatcttctccaatgatcggcactgggcagtagagagcacaccaggctcaggaaactc 122
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 62
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggtcagatttgat 701
|| || |||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 61 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggttagatttgat 2
Query: 702 c 702
|
Sbjct: 1 c 1
Score = 73.8 bits (37), Expect = 5e-011
Identities = 94/109 (86%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 24 ggtgcatcacaaatcatcactaccagcaagctcaatgtttcttac-acatcaaaaatagt 82
||||||||||||||||| || |||| ||| ||||||||| ||||| ||||| ||||||||
Sbjct: 730 ggtgcatcacaaatcattaccaccaacaaactcaatgttccttacaacatc-aaaatagt 672
Query: 83 agcacaccatgaacatgatacctttttcacgggtacaacaaaataacat 131
|||||||||||| | || || |||| |||||||| ||||||||||||
Sbjct: 671 agcacaccatgagctggacactttttagacgggtac-acaaaataacat 624
>gb|CD214074.1|CD214074 HS1_70_G11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_70_G11_A012 3', mRNA sequence
Length = 789
Score = 472 bits (238), Expect = e-131
Identities = 387/433 (89%), Gaps = 9/433 (2%)
Strand = Plus / Minus
Query: 257 atttttgccaaaaa-gaatcgagatgatcagatggataaaaaatcctgctgaaacttttg 315
|||||||||||||| |||||||||||||| |||||||||| |||||| |||| ||| |
Sbjct: 427 atttttgccaaaaaagaatcgagatgatcggatggataaa---tcctgcggaaattttgg 371
Query: 316 gagaacagt--tccaacgaacacggattttactgctgggcacattgcacccttggttgag 373
|| |||||| || | ||| | || |||||||||||||||||||||||||||| ||
Sbjct: 370 gacaacagtgttctgataaacccaaatcttactgctgggcacattgcacccttggtccag 311
Query: 374 catcctcgtcgtcgtcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctca 433
| ||||| ||||| || |||| ||||||||||| | |||||||||||||||||||||
Sbjct: 310 cctcctcctcgtcctcatcat---aggcttcctgccgcctctgctgctgcctgcgcctca 254
Query: 434 tctcctcttctatgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgt 493
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 253 tctcctcttctatgttgacatcatgcagggtggtctcctcacactggtccagctccatgt 194
Query: 494 ccgacagttggctccctggtttcggcggaaggatcttctccaacgaacggcactgggcag 553
| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 193 ctgacagttggctccctggtttcggtggaaggatcttctccaatgatcggcactgggcag 134
Query: 554 gggagagcacaccaggctcgggaaactccacgttgaattcaacaaacagacgacccttca 613
||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 133 tggagagcacaccaagctcaggaaactcgacgttgaattcaacaaacagacgacccttca 74
Query: 614 tgaaaggacggccatgctgaggcataccttcatcgttaatggccttgtgttgacctggtt 673
|||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 73 tgaaaggacgcccatgctgaggcataccctcgtcattaatggccttgtgttgacctggtt 14
Query: 674 taataacctcccc 686
|||||||||||||
Sbjct: 13 taataacctcccc 1
Score = 73.8 bits (37), Expect = 5e-011
Identities = 94/109 (86%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 24 ggtgcatcacaaatcatcactaccagcaagctcaatgtttcttac-acatcaaaaatagt 82
||||||||||||||||| || |||| ||| ||||||||| ||||| ||||| ||||||||
Sbjct: 715 ggtgcatcacaaatcattaccaccaacaaactcaatgttccttacaacatc-aaaatagt 657
Query: 83 agcacaccatgaacatgatacctttttcacgggtacaacaaaataacat 131
|||||||||||| | || || |||| |||||||| ||||||||||||
Sbjct: 656 agcacaccatgagctggacactttttagacgggtac-acaaaataacat 609
>gb|BE592735.1|BE592735 WS1_95_F07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 468 bits (236), Expect = e-130
Identities = 322/350 (92%), Gaps = 3/350 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 351 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 295
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 294 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 235
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 234 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 175
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 174 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 115
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 114 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 55
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctccccggggt 691
|| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 54 ctcgtcattaatggccttgtgttgacctggtttaataacctccccagggt 5
>gb|BG356001.2|BG356001 EM1_19_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 648
Score = 462 bits (233), Expect = e-128
Identities = 316/343 (92%), Gaps = 3/343 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 340 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 284
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 283 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 224
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 223 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 164
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 163 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 104
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 103 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 44
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataacctcc 684
|| || ||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctcgtcattaatggccttgtgttgacctggtttaataacctcc 1
>gb|CX618388.1|CX618388 GABR1_39_G02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_39_G02_A002 3', mRNA sequence
Length = 704
Score = 454 bits (229), Expect = e-125
Identities = 312/339 (92%), Gaps = 3/339 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 336 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 280
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 279 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 220
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 219 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 160
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 159 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 100
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 99 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 40
Query: 642 ttcatcgttaatggccttgtgttgacctggtttaataac 680
|| || ||||||||||||||||||||||||||||||||
Sbjct: 39 ctcgtcattaatggccttgtgttgacctggtttaataac 1
Score = 60.0 bits (30), Expect = 7e-007
Identities = 87/102 (85%), Gaps = 3/102 (2%)
Strand = Plus / Minus
Query: 31 cacaaatcatcactaccagcaagctcaatgtttcttaca-catcaaaaatagtagcacac 89
|||||||||| || |||| ||| ||||||||| |||||| |||||||| |||||||||||
Sbjct: 702 cacaaatcattaccaccaacaaactcaatgttccttacaacatcaaaa-tagtagcacac 644
Query: 90 catgaacatgatacctttttcacgggtacaacaaaataacat 131
||||| | || || |||| |||||||| ||||||||||||
Sbjct: 643 catgagctggacactttttagacgggtac-acaaaataacat 603
>gb|CW293918.1|CW293918 104_774_11414913_116_35773_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414913, DNA
sequence
Length = 677
Score = 432 bits (218), Expect = e-119
Identities = 301/328 (91%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 93 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 149
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 150 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 209
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 210 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 269
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 270 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 329
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 330 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 389
Query: 642 ttcatcgttaatggccttgtgttgacct 669
|| || |||||||||||||||||||||
Sbjct: 390 ctcgtcattaatggccttgtgttgacct 417
Score = 218 bits (110), Expect = 1e-054
Identities = 143/154 (92%)
Strand = Plus / Plus
Query: 666 acctggtttaataacctccccggggtcagatttgatcagaagctgtcgcccatcaagatg 725
||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 524 acctggtttaataacctccccagggttagatttgatcagaagctgccggccatcaagatg 583
Query: 726 agtaagaacaaactggaagccacacaatgcttcggtgagagagattgtgtgctcaacata 785
|||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 584 agtaagaacaaactggaagccacacagtgcctcagtgagagagattgtgtgctcaacata 643
Query: 786 taagtcatcgtacatcctcttaaattttggatgg 819
||||||||| ||| ||||||| || |||||||||
Sbjct: 644 taagtcatcatacttcctctttaactttggatgg 677
>gb|BG411018.1|BG411018 EM1_28_G05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 652
Score = 418 bits (211), Expect = e-115
Identities = 294/321 (91%), Gaps = 3/321 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 318 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 262
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 261 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 202
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 201 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 142
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 141 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 82
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 81 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctgaggcatacc 22
Query: 642 ttcatcgttaatggccttgtg 662
|| || ||||||||||||||
Sbjct: 21 ctcgtcattaatggccttgtg 1
Score = 42.1 bits (21), Expect = 0.16
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 75 aaaatagtagcacaccatgaacatgatacctttttcacgggtacaacaaaataacat 131
|||||||||||||||||||| | || || |||| |||||||| ||||||||||||
Sbjct: 640 aaaatagtagcacaccatgagctggacactttttagacgggtac-acaaaataacat 585
>gb|BG948255.1|BG948255 IP1_11_C05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 580
Score = 394 bits (199), Expect = e-107
Identities = 285/313 (91%), Gaps = 3/313 (0%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 310 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 254
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 253 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 194
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 193 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 134
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 133 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 74
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctgaggcatacc 641
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 73 gacgttgaattcaacaaacagacgacccttcatgagaggacgcccatgctgaggcatacc 14
Query: 642 ttcatcgttaatg 654
|| || ||||||
Sbjct: 13 ctcgtcattaatg 1
>gb|CF757735.1|CF757735 DSAF1_21_F03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_21_F03_A011 3', mRNA sequence
Length = 679
Score = 381 bits (192), Expect = e-103
Identities = 266/290 (91%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 287 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 231
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 230 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 171
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 170 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 111
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 110 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 51
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgct 631
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 50 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgct 1
Score = 73.8 bits (37), Expect = 5e-011
Identities = 94/109 (86%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 24 ggtgcatcacaaatcatcactaccagcaagctcaatgtttcttac-acatcaaaaatagt 82
||||||||||||||||| || |||| ||| ||||||||| ||||| ||||| ||||||||
Sbjct: 660 ggtgcatcacaaatcattaccaccaacaaactcaatgttccttacaacatc-aaaatagt 602
Query: 83 agcacaccatgaacatgatacctttttcacgggtacaacaaaataacat 131
|||||||||||| | || || |||| |||||||| ||||||||||||
Sbjct: 601 agcacaccatgagctggacactttttagacgggtac-acaaaataacat 554
>gb|CF482461.1|CF482461 POL1_7_C08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_C08_A002 3', mRNA sequence
Length = 658
Score = 375 bits (189), Expect = e-102
Identities = 266/291 (91%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| | |||| || ||||| ||||| |||||
Sbjct: 288 ttactgctgggcacattgcacccttggt---ccggcctcctcctcgtcctcatcataggc 232
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 231 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 172
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 171 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 112
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 111 aaggatcttctccaatgatcggcactgggcagtggagagcacaccaggctcaggaaactc 52
Query: 582 cacgttgaattcaacaaacagacgacccttcatgaaaggacggccatgctg 632
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 51 gacgttgaattcaacaaacagacgacccttcatgaaaggacgcccatgctg 1
Score = 67.9 bits (34), Expect = 3e-009
Identities = 91/106 (85%), Gaps = 3/106 (2%)
Strand = Plus / Minus
Query: 27 gcatcacaaatcatcactaccagcaagctcaatgtttcttac-acatcaaaaatagtagc 85
|||||||||||||| || |||| ||| ||||||||| ||||| ||||| |||||||||||
Sbjct: 658 gcatcacaaatcattaccaccaacaaactcaatgttccttacaacatc-aaaatagtagc 600
Query: 86 acaccatgaacatgatacctttttcacgggtacaacaaaataacat 131
||||||||| | || || |||| |||||||| ||||||||||||
Sbjct: 599 acaccatgagctggacactttttagacgggtac-acaaaataacat 555
>gb|CD211449.1|CD211449 HS1_60_G08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_G08_A012 3', mRNA sequence
Length = 570
Score = 369 bits (186), Expect = e-100
Identities = 350/401 (87%), Gaps = 9/401 (2%)
Strand = Plus / Minus
Query: 257 atttttgccaaaaa-gaatcgagatgatcagatggataaaaaatcctgctgaaacttttg 315
|||||||||||||| |||||||||||||| |||||||||| |||||| |||| ||| |
Sbjct: 395 atttttgccaaaaaagaatcgagatgatcggatggataaa---tcctgcggaaattttgg 339
Query: 316 gagaacagt--tccaacgaacacggattttactgctgggcacattgcacccttggttgag 373
|| |||||| || | ||| | || |||||||||||||||||||||||||| |
Sbjct: 338 gacaacagtgttctgataaacccaaatcttactgctgggcacattgcacccttg---ggc 282
Query: 374 catcctcgtcgtcgtcttcatcgtaggcttcctgcttcttctgctgctgcctgcgcctca 433
|| |||| || ||||| ||||| |||| ||||||| | |||||||||||||||||||||
Sbjct: 281 cagcctcctcctcgtcctcatcatagggttcctgccgcctctgctgctgcctgcgcctca 222
Query: 434 tctcctcttctatgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgt 493
|||||||||||||||||||||| || |||| || |||||| |||||||||||||||||||
Sbjct: 221 tctcctcttctatgttgacatcatgcagggggggctcctcacactggtccagctccatgt 162
Query: 494 ccgacagttggctccctggtttcggcggaaggatcttctccaacgaacggcactgggcag 553
| ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 161 ctgacagttggctccctggtttcggtggaaggatcttctccaatgatcggcactgggcag 102
Query: 554 gggagagcacaccaggctcgggaaactccacgttgaattcaacaaacagacgacccttca 613
||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 101 tggagagcacaccaagctcaggaaactcgacgttgaattcaacaaacagacgacccttca 42
Query: 614 tgaaaggacggccatgctgaggcataccttcatcgttaatg 654
|||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 41 tgaaaggacgcccatgctgagggataccctcgtcattaatg 1
>gb|CW293919.1|CW293919 104_774_11414913_148_35772_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414913, DNA
sequence
Length = 693
Score = 327 bits (165), Expect = 2e-087
Identities = 210/225 (93%)
Strand = Plus / Minus
Query: 445 atgttgacatcgtgaagggtggtctcctcgcactggtccagctccatgtccgacagttgg 504
||||||||||| || ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 693 atgttgacatcatgcagggttgtctcctcacactggtccagctccatgtctgacagttgg 634
Query: 505 ctccctggtttcggcggaaggatcttctccaacgaacggcactgggcaggggagagcaca 564
|||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 633 ctccctggtttcggtggaaggatcttctccaatgatcggcactgggcagtggagagcaca 574
Query: 565 ccaggctcgggaaactccacgttgaattcaacaaacagacgacccttcatgaaaggacgg 624
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccaggctcaggaaactcgacgttgaattcaacaaacagacgacccttcatgaaaggacgc 514
Query: 625 ccatgctgaggcataccttcatcgttaatggccttgtgttgacct 669
||||||||||||||||| || || |||||||||||||||||||||
Sbjct: 513 ccatgctgaggcataccctcgtcattaatggccttgtgttgacct 469
Score = 319 bits (161), Expect = 5e-085
Identities = 191/201 (95%)
Strand = Plus / Minus
Query: 666 acctggtttaataacctccccggggtcagatttgatcagaagctgtcgcccatcaagatg 725
||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 362 acctggtttaataacctccccagggttagatttgatcagaagctgccggccatcaagatg 303
Query: 726 agtaagaacaaactggaagccacacaatgcttcggtgagagagattgtgtgctcaacata 785
|||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 302 agtaagaacaaactggaagccacacagtgcctcagtgagagagattgtgtgctcaacata 243
Query: 786 taagtcatcgtacatcctcttaaattttggatggtctttaagttgcaagacaaaaacaat 845
||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 242 taagtcatcatacttcctcttaaactttggatggtctttaagttgcaagacaaaaacaat 183
Query: 846 gtctcctgtaaccgtatcagg 866
|||||||||||||||||||||
Sbjct: 182 gtctcctgtaaccgtatcagg 162
Score = 129 bits (65), Expect = 9e-028
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 867 agcttcatcagcttgaccctggaatacaatcttttggttatgttgcattcctttctccac 926
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 73 agcttcatcagcttgaccctggaatacaatcttttggctatgttgcattcctttctccac 14
Query: 927 atgaacctc 935
|||||||||
Sbjct: 13 atgaacctc 5
>gb|BG556435.1|BG556435 EM1_37_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 437
Score = 321 bits (162), Expect = 1e-085
Identities = 235/259 (90%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 342 ttactgctgggcacattgcacccttggttgagcatcctcgtcgtcgtcttcatcgtaggc 401
|||||||||||||||||||||||||||| ||| ||||| ||||| || |||| ||||
Sbjct: 256 ttactgctgggcacattgcacccttggtccagcctcctcctcgtcctcatcat---aggc 200
Query: 402 ttcctgcttcttctgctgctgcctgcgcctcatctcctcttctatgttgacatcgtgaag 461
|||||| | ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 199 ctcctgccgcctctgctgctgcctgcgcctcatctcctcttctatgttgacatcatgcag 140
Query: 462 ggtggtctcctcgcactggtccagctccatgtccgacagttggctccctggtttcggcgg 521
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 139 ggtggtctcctcacactggtccagctccatgtctgacagttggctccctggtttcggtgg 80
Query: 522 aaggatcttctccaacgaacggcactgggcaggggagagcacaccaggctcgggaaactc 581
||||||||||||||| || |||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 79 aaggatcttctccaatgatcggcactgngcagtggagagcacaccaggctcaggaaactc 20
Query: 582 cacgttgaattcaacaaac 600
||||||||||||||||||
Sbjct: 19 gacgttgaattcaacaaac 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 497,277
Number of Sequences: 832831
Number of extensions: 497277
Number of successful extensions: 136548
Number of sequences better than 0.5: 306
Number of HSP's better than 0.5 without gapping: 305
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 135479
Number of HSP's gapped (non-prelim): 915
length of query: 1645
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1625
effective length of database: 474,703,049
effective search space: 771392454625
effective search space used: 771392454625
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)