BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.2
(4065 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassino... 1227 0.0
gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassino... 1191 0.0
gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-tr... 954 0.0
gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient se... 914 0.0
gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-defic... 860 0.0
gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkal... 860 0.0
gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficie... 722 0.0
gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sor... 712 0.0
gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficie... 664 0.0
gb|CW319522.1|CW319522 104_812_11474531_148_35892_046 Sorgh... 660 0.0
gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2... 634 e-179
gb|CX621309.1|CX621309 GABR1_57_H04.b1_A002 GA- or brassino... 620 e-175
gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Me... 618 e-175
gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Me... 611 e-172
gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2... 545 e-152
gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (... 533 e-149
gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient se... 533 e-149
gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient se... 511 e-142
gb|CD461570.1|CD461570 SA1_33_E06.b1_A002 Salicylic acid-tr... 502 e-139
gb|CF428687.1|CF428687 PH1_17_F11.b1_A002 Phosphorous-defic... 496 e-138
gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2... 494 e-137
gb|BF421749.1|BF421749 FM1_16_B07.g1_A003 Floral-Induced Me... 492 e-136
gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation... 486 e-135
gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle... 486 e-135
gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2... 470 e-130
gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation... 460 e-127
gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1... 456 e-126
gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2)... 452 e-124
gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infecte... 422 e-115
gb|BE919029.1|BE919029 FM1_3_B10.g1_A003 Floral-Induced Mer... 418 e-114
gb|CX617979.1|CX617979 GABR1_37_B05.b1_A002 GA- or brassino... 410 e-112
gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorgh... 389 e-105
gb|BI099615.1|BI099615 IP1_44_E03.g1_A002 Immature pannicle... 379 e-102
gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Me... 377 e-102
gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorgh... 369 1e-099
gb|BF421657.1|BF421657 FM1_10_G10.g1_A003 Floral-Induced Me... 369 1e-099
gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Me... 367 5e-099
gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-tre... 367 5e-099
gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stress... 367 5e-099
gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorgh... 361 3e-097
gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG... 359 1e-096
gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2... 359 1e-096
gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle... 359 1e-096
gb|CW319521.1|CW319521 104_812_11474531_116_35888_046 Sorgh... 349 1e-093
gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Me... 349 1e-093
gb|CD425235.1|CD425235 SA1_11_F01.b1_A002 Salicylic acid-tr... 349 1e-093
gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2... 343 8e-092
gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorgh... 341 3e-091
gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Me... 341 3e-091
gb|CD230894.1|CD230894 SS1_20_G01.b1_A012 Salt-stressed see... 339 1e-090
gb|BZ423529.1|BZ423529 id50c12.g1 WGS-SbicolorF (DH5a methy... 335 2e-089
gb|BF585899.1|BF585899 FM1_25_H06.g1_A003 Floral-Induced Me... 331 3e-088
gb|BG947178.1|BG947178 IP1_3_E01.g1_A002 Immature pannicle ... 331 3e-088
gb|CF432975.1|CF432975 NIT1_20_E12.b1_A002 Nitrogen-deficie... 331 3e-088
gb|BG948207.1|BG948207 IP1_10_F08.g1_A002 Immature pannicle... 329 1e-087
gb|BG051468.1|BG051468 FM1_56_H02.g1_A003 Floral-Induced Me... 325 2e-086
gb|AW680151.1|AW680151 WS1_4_E04.g1_A002 Water-stressed 1 (... 323 7e-086
gb|BZ422160.1|BZ422160 id50c12.b1 WGS-SbicolorF (DH5a methy... 311 3e-082
gb|AW671807.1|AW671807 LG1_351_D02.g1_A002 Light Grown 1 (L... 303 7e-080
gb|CN134640.1|CN134640 OX1_27_C06.g1_A002 Oxidatively-stres... 303 7e-080
gb|CL172543.1|CL172543 104_375_10890237_148_31796_141 Sorgh... 301 3e-079
gb|BI098336.1|BI098336 IP1_31_B05.b1_A002 Immature pannicle... 301 3e-079
gb|BG101839.1|BG101839 RHIZ2_23_A10.g1_A003 Rhizome2 (RHIZ2... 297 4e-078
gb|CF074199.1|CF074199 FE1_21_C05.g1_A002 Iron-deficient se... 293 7e-077
gb|BG241885.1|BG241885 RHIZ2_51_H04.b1_A003 Rhizome2 (RHIZ2... 264 6e-068
gb|BG948020.1|BG948020 IP1_8_D05.b1_A002 Immature pannicle ... 258 4e-066
gb|CF757235.1|CF757235 DSAF1_15_D07.g1_A011 Drought-stresse... 256 1e-065
gb|CW335567.1|CW335567 104_834_11483110_116_36083_087 Sorgh... 250 9e-064
gb|BG103304.1|BG103304 RHIZ2_18_D07.b1_A003 Rhizome2 (RHIZ2... 244 5e-062
gb|BE126016.1|BE126016 DG1_65_B11.b1_A002 Dark Grown 1 (DG1... 228 3e-057
gb|CD212657.1|CD212657 HS1_6_E10.g1_A012 Heat-shocked seedl... 216 1e-053
gb|CW335568.1|CW335568 104_834_11483110_148_36104_087 Sorgh... 212 2e-052
gb|CW344901.1|CW344901 104_847_11488203_148_36202_004 Sorgh... 212 2e-052
gb|CW382740.1|CW382740 fsbb001f064o11k0 Sorghum methylation... 210 8e-052
gb|BF587521.1|BF587521 FM1_37_D11.g1_A003 Floral-Induced Me... 200 7e-049
gb|CW382739.1|CW382739 fsbb001f064o11f0 Sorghum methylation... 196 1e-047
gb|BG051145.1|BG051145 FM1_56_H02.b1_A003 Floral-Induced Me... 186 1e-044
gb|CW304966.1|CW304966 104_790_11466066_148_37436_077 Sorgh... 178 3e-042
gb|CF433508.1|CF433508 NIT1_27_E11.g1_A002 Nitrogen-deficie... 178 3e-042
gb|BG051682.1|BG051682 FM1_60_A04.g1_A003 Floral-Induced Me... 159 2e-036
gb|CW056421.1|CW056421 104_298_10517674_114_30156 Sorghum m... 153 2e-034
gb|CD220053.1|CD220053 CCC1_60_F06.g1_A007 Callus culture/c... 151 6e-034
gb|BF585752.1|BF585752 FM1_24_B07.b1_A003 Floral-Induced Me... 147 9e-033
gb|BF656010.1|BF656010 FM1_42_G12.b1_A003 Floral-Induced Me... 139 2e-030
gb|BG948758.1|BG948758 LG1_330_A01.b1_A002 Light Grown 1 (L... 129 2e-027
gb|CN134554.1|CN134554 OX1_27_C06.b1_A002 Oxidatively-stres... 127 9e-027
gb|CL155293.1|CL155293 104_341_10782024_116_31472_120 Sorgh... 121 5e-025
gb|BE598881.1|BE598881 PI1_83_C07.b1_A002 Pathogen induced ... 117 8e-024
gb|BF656561.1|BF656561 FM1_51_F02.g1_A003 Floral-Induced Me... 117 8e-024
gb|CN129331.1|CN129331 RHOH1_34_G09.g1_A002 Acid- and alkal... 113 1e-022
gb|CW237955.1|CW237955 104_694_11216459_116_37393_038 Sorgh... 111 5e-022
gb|CW451925.1|CW451925 fsbb001f192d14f0 Sorghum methylation... 111 5e-022
gb|CX608297.1|CX608297 ANR1_37_F12.g1_A002 Anaerobic roots ... 111 5e-022
gb|CW462663.1|CW462663 fsbb001f210o15k0 Sorghum methylation... 109 2e-021
gb|BG050771.1|BG050771 FM1_70_D01.b1_A003 Floral-Induced Me... 107 8e-021
gb|BI075805.1|BI075805 IP1_21_D10.b1_A002 Immature pannicle... 107 8e-021
gb|BI211927.1|BI211927 IP1_62_B12.b1_A002 Immature pannicle... 107 8e-021
gb|CW462662.1|CW462662 fsbb001f210o15f0 Sorghum methylation... 103 1e-019
gb|BE355233.1|BE355233 DG1_113_C09.b1_A002 Dark Grown 1 (DG... 103 1e-019
gb|BG051983.1|BG051983 RHIZ2_7_D11.g1_A003 Rhizome2 (RHIZ2)... 103 1e-019
gb|BG241543.1|BG241543 RHIZ2_51_H04.g1_A003 Rhizome2 (RHIZ2... 103 1e-019
gb|BI643766.1|BI643766 IP1_56_G10.b1_A002 Immature pannicle... 103 1e-019
gb|CD227355.1|CD227355 CCC1_50_D12.g1_A007 Callus culture/c... 103 1e-019
gb|CW480836.1|CW480836 fsbb001f240b20f0 Sorghum methylation... 100 2e-018
gb|BE126049.1|BE126049 DG1_65_G07.b1_A002 Dark Grown 1 (DG1... 98 8e-018
gb|CW203376.1|CW203376 104_631_11185990_148_36906_095 Sorgh... 96 3e-017
gb|CW431890.1|CW431890 fsbb001f146f11k0 Sorghum methylation... 96 3e-017
gb|BG241497.1|BG241497 RHIZ2_50_A08.g1_A003 Rhizome2 (RHIZ2... 96 3e-017
gb|BG103131.1|BG103131 RHIZ2_18_E07.g1_A003 Rhizome2 (RHIZ2... 94 1e-016
gb|BM331086.1|BM331086 PIC1_69_D12.g1_A002 Pathogen-infecte... 94 1e-016
gb|BM331095.1|BM331095 PIC1_69_E12.g1_A002 Pathogen-infecte... 94 1e-016
gb|CW378707.1|CW378707 fsbb001f057j16f0 Sorghum methylation... 92 5e-016
gb|CW502290.1|CW502290 fsbb001f298i22f0 Sorghum methylation... 92 5e-016
gb|CN127278.1|CN127278 RHOH1_22_C03.b1_A002 Acid- and alkal... 92 5e-016
gb|CN128917.1|CN128917 RHOH1_32_H10.b1_A002 Acid- and alkal... 92 5e-016
gb|CW233496.1|CW233496 104_686_11213456_148_37375_020 Sorgh... 90 2e-015
gb|BM331336.1|BM331336 PIC1_64_G10.g1_A002 Pathogen-infecte... 90 2e-015
gb|CN152146.1|CN152146 WOUND1_80_C12.b1_A002 Wounded leaves... 90 2e-015
gb|CD227780.1|CD227780 CCC1_53_B11.g1_A007 Callus culture/c... 88 8e-015
gb|CD423780.1|CD423780 SA1_1_G10.b1_A002 Salicylic acid-tre... 86 3e-014
gb|DR831430.2|DR831430 MT69 Sorghum bicolor greenbug-respon... 86 3e-014
gb|BG557440.1|BG557440 EM1_44_B10.b1_A002 Embryo 1 (EM1) So... 84 1e-013
gb|BI075180.1|BI075180 IP1_17_A09.b1_A002 Immature pannicle... 84 1e-013
gb|CW378708.1|CW378708 fsbb001f057j16k0 Sorghum methylation... 82 5e-013
gb|BG947269.1|BG947269 IP1_3_E08.b1_A002 Immature pannicle ... 82 5e-013
gb|BI211821.1|BI211821 IP1_61_F01.b1_A002 Immature pannicle... 82 5e-013
gb|BI245743.1|BI245743 IP1_63_G04.b1_A002 Immature pannicle... 82 5e-013
gb|CX607503.1|CX607503 ANR1_29_C09.b1_A002 Anaerobic roots ... 82 5e-013
gb|CX607587.1|CX607587 ANR1_29_C09.g1_A002 Anaerobic roots ... 82 5e-013
gb|CW023463.1|CW023463 104_163_10432463_1_30001 Sorghum met... 80 2e-012
gb|CW296109.1|CW296109 104_777_11461315_116_35620_068 Sorgh... 80 2e-012
gb|CW296110.1|CW296110 104_777_11461315_148_35624_068 Sorgh... 80 2e-012
gb|CW148394.1|CW148394 104_547_11141932_116_35015_016 Sorgh... 78 7e-012
gb|CW148395.1|CW148395 104_547_11141932_148_35011_016 Sorgh... 78 7e-012
gb|CW213542.1|CW213542 104_645_11191609_148_37039_013 Sorgh... 78 7e-012
gb|CW496561.1|CW496561 fsbb001f288o02f0 Sorghum methylation... 78 7e-012
gb|AW672122.1|AW672122 LG1_357_F04.b1_A002 Light Grown 1 (L... 78 7e-012
gb|BG240580.1|BG240580 OV1_31_F08.b1_A002 Ovary 1 (OV1) Sor... 78 7e-012
gb|BI141589.1|BI141589 IP1_54_D04.b1_A002 Immature pannicle... 78 7e-012
gb|BI643725.1|BI643725 IP1_56_C04.b1_A002 Immature pannicle... 78 7e-012
gb|CD423905.1|CD423905 SA1_2_G12.b1_A002 Salicylic acid-tre... 78 7e-012
gb|CW164546.1|CW164546 104_572_11152044_116_36464_038 Sorgh... 76 3e-011
gb|CW224628.1|CW224628 104_662_11203928_116_37202_032 Sorgh... 76 3e-011
gb|BF481793.1|BF481793 FM1_20_D08.b1_A003 Floral-Induced Me... 76 3e-011
gb|BF586580.1|BF586580 FM1_29_A05.b1_A003 Floral-Induced Me... 76 3e-011
gb|BG158395.1|BG158395 FM1_60_A04.b1_A003 Floral-Induced Me... 76 3e-011
gb|CW502291.1|CW502291 fsbb001f298i22k0 Sorghum methylation... 74 1e-010
gb|CD213148.1|CD213148 HS1_28_B08.g1_A012 Heat-shocked seed... 74 1e-010
gb|CL148485.1|CL148485 104_328_10593130_116_31783_254 Sorgh... 70 2e-009
gb|CL148486.1|CL148486 104_328_10593130_148_31782_254 Sorgh... 70 2e-009
gb|CW113232.1|CW113232 104_487_11105330_116_34554_007 Sorgh... 70 2e-009
gb|CW164547.1|CW164547 104_572_11152044_148_36463_038 Sorgh... 70 2e-009
gb|CW224629.1|CW224629 104_662_11203928_148_37201_032 Sorgh... 70 2e-009
gb|CW385345.1|CW385345 fsbb001f068m13k0 Sorghum methylation... 70 2e-009
gb|CW430835.1|CW430835 fsbb001f144l18k0 Sorghum methylation... 70 2e-009
gb|CW482520.1|CW482520 fsbb001f242k13f0 Sorghum methylation... 70 2e-009
gb|CW482521.1|CW482521 fsbb001f242k13k0 Sorghum methylation... 70 2e-009
gb|AW744882.1|AW744882 LG1_384_E04.b1_A002 Light Grown 1 (L... 70 2e-009
gb|BE918058.1|BE918058 OV1_1_D06.b1_A002 Ovary 1 (OV1) Sorg... 70 2e-009
gb|BE918108.1|BE918108 OV1_2_A10.b1_A002 Ovary 1 (OV1) Sorg... 70 2e-009
gb|BG048793.1|BG048793 OV1_23_B06.b1_A002 Ovary 1 (OV1) Sor... 70 2e-009
gb|CN129247.1|CN129247 RHOH1_34_G09.b3_A002 Acid- and alkal... 70 2e-009
gb|CW071795.1|CW071795 104_324_10591777_116_30462 Sorghum m... 68 7e-009
gb|CW236986.1|CW236986 104_693_11215917_148_37517_093 Sorgh... 68 7e-009
gb|BE357266.1|BE357266 DG1_148_D12.b1_A002 Dark Grown 1 (DG... 68 7e-009
gb|BG947780.1|BG947780 IP1_5_A08.b1_A002 Immature pannicle ... 68 7e-009
gb|BI076119.1|BI076119 IP1_25_A08.b1_A002 Immature pannicle... 68 7e-009
gb|BI076140.1|BI076140 IP1_26_A08.b1_A002 Immature pannicle... 68 7e-009
gb|BI141671.1|BI141671 IP1_55_E02.b1_A002 Immature pannicle... 68 7e-009
gb|CD211868.1|CD211868 HS1_67_A05.b1_A012 Heat-shocked seed... 68 7e-009
gb|CF433703.1|CF433703 NIT1_28_F11.g1_A002 Nitrogen-deficie... 66 3e-008
gb|CL192265.1|CL192265 104_415_10940114_116_32261_015 Sorgh... 64 1e-007
gb|CW308239.1|CW308239 104_796_11468563_116_35730_070 Sorgh... 64 1e-007
gb|CW308240.1|CW308240 104_796_11468563_148_35738_070 Sorgh... 64 1e-007
gb|CW058702.1|CW058702 104_301_10518887_115_30164 Sorghum m... 62 4e-007
gb|CW203375.1|CW203375 104_631_11185990_116_37062_095 Sorgh... 62 4e-007
gb|CW406407.1|CW406407 fsbb001f099g12f0 Sorghum methylation... 62 4e-007
gb|BF587214.1|BF587214 FM1_33_F03.b2_A003 Floral-Induced Me... 62 4e-007
gb|BI075362.1|BI075362 IP1_19_F06.b1_A002 Immature pannicle... 62 4e-007
gb|AW286294.1|AW286294 LG1_330_A01.g1_A002 Light Grown 1 (L... 60 2e-006
gb|BE598541.1|BE598541 PI1_83_C07.g1_A002 Pathogen induced ... 60 2e-006
gb|BF481979.1|BF481979 FM1_19_G05.b1_A003 Floral-Induced Me... 56 3e-005
gb|BF585972.1|BF585972 FM1_25_H01.b1_A003 Floral-Induced Me... 56 3e-005
gb|CW024404.1|CW024404 104_164_10434936_1_30002 Sorghum met... 54 1e-004
gb|CW068735.1|CW068735 104_317_10525278_1_30096 Sorghum met... 54 1e-004
gb|CW366544.1|CW366544 fsbb001f039j12f0 Sorghum methylation... 54 1e-004
gb|CW459296.1|CW459296 fsbb001f205p12f0 Sorghum methylation... 54 1e-004
gb|CW481819.1|CW481819 fsbb001f241j14k0 Sorghum methylation... 54 1e-004
gb|BG103285.1|BG103285 RHIZ2_18_E07.b1_A003 Rhizome2 (RHIZ2... 54 1e-004
gb|BG103336.1|BG103336 RHIZ2_18_H12.b1_A003 Rhizome2 (RHIZ2... 54 1e-004
gb|BG947832.1|BG947832 IP1_5_G03.b1_A002 Immature pannicle ... 54 1e-004
gb|BI076099.1|BI076099 IP1_25_G03.b1_A002 Immature pannicle... 54 1e-004
gb|BI245815.1|BI245815 IP1_64_G05.g1_A002 Immature pannicle... 54 1e-004
gb|BI245885.1|BI245885 IP1_64_G05.b1_A002 Immature pannicle... 54 1e-004
gb|CD233360.1|CD233360 SS1_13_G11.g1_A012 Salt-stressed see... 54 1e-004
gb|CF071970.1|CF071970 FE1_19_D03.g1_A002 Iron-deficient se... 54 1e-004
gb|CN128839.1|CN128839 RHOH1_31_H09.g1_A002 Acid- and alkal... 54 1e-004
gb|CN129000.1|CN129000 RHOH1_32_H10.g1_A002 Acid- and alkal... 54 1e-004
gb|CW116979.1|CW116979 104_492_11107412_116_34607_066 Sorgh... 52 4e-004
gb|CW501227.1|CW501227 fsbb001f296p02k0 Sorghum methylation... 52 4e-004
gb|BG465904.1|BG465904 RHIZ2_46_A10.g1_A003 Rhizome2 (RHIZ2... 52 4e-004
gb|BG557221.1|BG557221 EM1_44_B10.g1_A002 Embryo 1 (EM1) So... 52 4e-004
gb|BI141001.1|BI141001 IP1_41_H09.b1_A002 Immature pannicle... 52 4e-004
gb|CD219969.1|CD219969 CCC1_60_F06.b1_A007 Callus culture/c... 52 4e-004
gb|CD233339.1|CD233339 SS1_13_G11.b1_A012 Salt-stressed see... 52 4e-004
gb|CF071834.1|CF071834 FE1_19_D03.b1_A002 Iron-deficient se... 52 4e-004
gb|CF072057.1|CF072057 FE1_20_C10.b1_A002 Iron-deficient se... 52 4e-004
gb|CF771740.1|CF771740 DSBF1_23_E06.g1_A010 Drought-stresse... 52 4e-004
gb|CL167974.1|CL167974 104_365_10810478_114_31804_158 Sorgh... 50 0.002
gb|CW031320.1|CW031320 104_259_10500738_116_30398 Sorghum m... 50 0.002
gb|CW235188.1|CW235188 104_690_11214849_116_37409_041 Sorgh... 50 0.002
gb|CW235189.1|CW235189 104_690_11214849_148_37413_041 Sorgh... 50 0.002
gb|CW315001.1|CW315001 104_805_11472128_148_35822_018 Sorgh... 50 0.002
gb|CW315969.1|CW315969 104_807_11472644_148_35845_076 Sorgh... 50 0.002
gb|AW564329.1|AW564329 LG1_290_C06.b1_A002 Light Grown 1 (L... 50 0.002
gb|BE357339.1|BE357339 DG1_148_D12.g1_A002 Dark Grown 1 (DG... 50 0.002
gb|BE357401.1|BE357401 DG1_15_D04.b2_A002 Dark Grown 1 (DG1... 50 0.002
gb|BG103825.1|BG103825 RHIZ2_37_C06.b1_A003 Rhizome2 (RHIZ2... 50 0.002
gb|BI140951.1|BI140951 IP1_41_C08.b1_A002 Immature pannicle... 50 0.002
gb|BI141114.1|BI141114 IP1_43_D01.b1_A002 Immature pannicle... 50 0.002
gb|CD210886.1|CD210886 HS1_66_G06.g1_A012 Heat-shocked seed... 50 0.002
gb|CD427292.1|CD427292 SA1_18_E03.g1_A002 Salicylic acid-tr... 50 0.002
gb|CF430024.1|CF430024 PH1_25_C04.g1_A002 Phosphorous-defic... 50 0.002
gb|CW113233.1|CW113233 104_487_11105330_148_34550_007 Sorgh... 48 0.006
gb|CW218328.1|CW218328 104_651_11196119_116_37456_082 Sorgh... 48 0.006
gb|BG052472.1|BG052472 RHIZ2_13_D07.b1_A003 Rhizome2 (RHIZ2... 48 0.006
gb|CL167975.1|CL167975 104_365_10810478_116_31805_158 Sorgh... 46 0.026
gb|CW031319.1|CW031319 104_259_10500738_114_30397 Sorghum m... 46 0.026
gb|CW180606.1|CW180606 104_595_11163041_116_36639_075 Sorgh... 46 0.026
gb|CW180607.1|CW180607 104_595_11163041_148_36643_075 Sorgh... 46 0.026
gb|CW413531.1|CW413531 fsbb001f112l18f0 Sorghum methylation... 46 0.026
gb|AW564350.1|AW564350 LG1_290_D05.b1_A002 Light Grown 1 (L... 46 0.026
gb|BF586023.1|BF586023 FM1_33_F03.b1_A003 Floral-Induced Me... 46 0.026
gb|BG948058.1|BG948058 IP1_8_G12.b1_A002 Immature pannicle ... 46 0.026
gb|BI074863.1|BI074863 IP1_16_A11.b1_A002 Immature pannicle... 46 0.026
gb|BI245956.1|BI245956 IP1_65_G03.b1_A002 Immature pannicle... 46 0.026
gb|CF429881.1|CF429881 PH1_25_C04.b1_A002 Phosphorous-defic... 46 0.026
gb|CF433456.1|CF433456 NIT1_27_E11.b1_A002 Nitrogen-deficie... 46 0.026
gb|CW434433.1|CW434433 fsbb001f150c03f0 Sorghum methylation... 44 0.10
gb|BF704641.1|BF704641 FM1_49_F11.b1_A003 Floral-Induced Me... 44 0.10
gb|BG053928.1|BG053928 RHIZ2_11_G06.b1_A003 Rhizome2 (RHIZ2... 44 0.10
gb|BG103613.1|BG103613 RHIZ2_38_G01.g1_A003 Rhizome2 (RHIZ2... 44 0.10
gb|BG355743.2|BG355743 EM1_19_A02.b1_A002 Embryo 1 (EM1) So... 44 0.10
gb|CD234335.1|CD234335 SS1_26_F05.g1_A012 Salt-stressed see... 44 0.10
gb|CN137674.1|CN137674 OX1_58_G05.g1_A002 Oxidatively-stres... 44 0.10
gb|CN144532.1|CN144532 WOUND1_23_A12.b1_A002 Wounded leaves... 44 0.10
gb|CL161384.1|CL161384 104_352_10805682_116_31827_354 Sorgh... 42 0.40
gb|CW235146.1|CW235146 104_690_11214827_116_37407_042 Sorgh... 42 0.40
gb|CW405857.1|CW405857 fsbb001f098j13k0 Sorghum methylation... 42 0.40
gb|BE362694.1|BE362694 DG1_88_F12.g1_A002 Dark Grown 1 (DG1... 42 0.40
gb|BF705097.1|BF705097 RHIZ2_1_D04.b1_A003 Rhizome2 (RHIZ2)... 42 0.40
gb|BG103120.1|BG103120 RHIZ2_18_D07.g1_A003 Rhizome2 (RHIZ2... 42 0.40
gb|BG488403.1|BG488403 RHIZ2_63_C06.b1_A003 Rhizome2 (RHIZ2... 42 0.40
gb|CD211954.1|CD211954 HS1_67_A05.g1_A012 Heat-shocked seed... 42 0.40
gb|CD423915.1|CD423915 SA1_2_G12.g1_A002 Salicylic acid-tre... 42 0.40
gb|CN132797.1|CN132797 OX1_8_F12.b1_A002 Oxidatively-stress... 42 0.40
>gb|CX621396.1|CX621396 GABR1_57_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H04_A002 5', mRNA sequence
Length = 723
Score = 1227 bits (619), Expect = 0.0
Identities = 697/723 (96%)
Strand = Plus / Minus
Query: 1638 gacatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccatt 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gacatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccatt 664
Query: 1698 ctcgagaagtgtggatgtaaccaaaacagaagattggccaaatttcttttctaatttttg 1757
|||||| |||||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 663 ctcgagcagtgtggatgtaacaaagacagaagactgaccaaatttcttttctaatttttg 604
Query: 1758 ttgatttacaataccggccttttcattctcagctcctggagcagcttcgtcaatttcacc 1817
||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 603 ttgatttacaataccagctttttcattctcagctcctggagcagcttcatcaatttcacc 544
Query: 1818 aagagcatatgcaggggattggttctcttctttcttgaaaaataataactttttcttctc 1877
||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 543 aagagcatatgcaggggattgattttcttctttcttgaaaaataataattttttcttctc 484
Query: 1878 tgttttgggtttggtagtcttcttcttttgcttcctattgccaaagcagcaacagcaaaa 1937
||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 483 cgtttttggtttggtagtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaa 424
Query: 1938 gcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttgggggcatc 1997
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcaccacttcggccagcagttgcaagtccttgatggtggcttctttgttttgggggcatc 364
Query: 1998 ataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccctg 2057
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 363 ataaccatataatgcctgccttctaaatacacatccagtaccgacataaatcggaccctg 304
Query: 2058 aataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatatcg 2117
||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||
Sbjct: 303 aataccatccaaacctttcatattgatatcgaaaaagacaacattcctgttagcatatcg 244
Query: 2118 gtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttctttcc 2177
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtcatggcgatcagtcccatcaaatctttgagggaactgtacatagcaaaccttctttcc 184
Query: 2178 tagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgta 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgta 124
Query: 2238 gtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagactcggac 2297
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtgatcacaatccaagtttagcaaatatggagcatttgttagtacagcagagactcggac 64
Query: 2298 caatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctctctaga 2357
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||
Sbjct: 63 caatgcattcatagcaccagctttcttatgatggtcatagcctggccgtttctctcttga 4
Query: 2358 aac 2360
|||
Sbjct: 3 aac 1
>gb|CX618063.1|CX618063 GABR1_37_B05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_B05_A002 5', mRNA sequence
Length = 728
Score = 1191 bits (601), Expect = 0.0
Identities = 698/729 (95%), Gaps = 1/729 (0%)
Strand = Plus / Minus
Query: 775 atgacaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaaga 834
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 728 atgacaattgttggtgtcctgttttgccttccaaccaaacctttgaggaagggatacaga 669
Query: 835 tggacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactcatat 894
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 668 tggacaatcacccaaaatgcaaagaagagcttcccaaagaggggaccccatgactcatat 609
Query: 895 ccgttattgatcgcatttgaaacgccagcgaccacaccaatgaagttcaatagaagcaag 954
||||||||||| || || ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 608 ccgttattgattgcgttggaaacaccagcaaccacaccaatgaagttcaataggagcaaa 549
Query: 955 gtggtaggaggtatcaataaggtagtccatttgaatgtatatagctctgagaactcctca 1014
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 548 gtggtaggaggtatcaataaggtagtccatttgaatgtatacagctctgagaactcctca 489
Query: 1015 tcatctccaccctttgatgtcacggtgaagcttgtatcaacaccagctatgaccttgaga 1074
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcatctccaccctttgatgtcacagtgaagcttgtatcaacaccagctatgaccttgaga 429
Query: 1075 agtccctggaacacagcaaagaggtgtgaggacacacctccaatgacccagaactgctca 1134
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 428 agtccctggaacacagcaaagaggtgcgaggacacacctccaatgacccagaactgctca 369
Query: 1135 ttcctccaccagtcatcaattccaacaccactccatctcatttctaggatgctcgtagca 1194
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 ttcctccaccaatcatcaattccaacaccactccatctcatttctaggatgcttgtagca 309
Query: 1195 aaaatgcagataaaaagtgacatgaaccacaggctggcaacattattcagctctggagtg 1254
|||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 308 aaaatgcaaataaagagtgacatgaaccacaggctggcaacattattcaactctggagtg 249
Query: 1255 ataaatttccctgtcaataaacagatggcaggcaatgtacagtaagccaagaggggaata 1314
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 248 ataaatttccccgtcaataaacaaatggcaggcaatgtacagtaagccaaaaggggaata 189
Query: 1315 gatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccg 1374
||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 188 gatgtccaaggatacacaatggagttgatgtaggaaaatctttccagaaatttcaggcca 129
Query: 1375 ccaccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaaga 1434
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 128 ccgccatacccataccaaagagggcaatgattgctgaagaagatttcaatagacccaaga 69
Query: 1435 gcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaat 1494
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 68 gcccaacgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacc-ttgaat 10
Query: 1495 gcaacccgt 1503
|||||||||
Sbjct: 9 gcaacccgt 1
>gb|CD425359.1|CD425359 SA1_11_F01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_F01_A002 5', mRNA sequence
Length = 591
Score = 954 bits (481), Expect = 0.0
Identities = 553/577 (95%)
Strand = Plus / Minus
Query: 2734 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgaa 2793
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 591 attgcggcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgca 532
Query: 2794 aggatagatagaacagtatttgttgtgaccaaaggaggttcctttaagggatcaaccgta 2853
|||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 531 aggatagacagaacagtatttgctgtgaccaaaggaggttcctttaacggatcaactgta 472
Query: 2854 ctgacaaagaaatcaattggagcaagttgagatggctggccttccttgtcgaacctcagt 2913
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 471 ctgacaaaaaaatcaattggagcaagttgagatggctggccttccttgtcaaacctcagt 412
Query: 2914 gacagccggtctaggtaagtctctctctcaatagggaaccactttgggaattgatcaaga 2973
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 411 gacagccgatctaggtaagtctctctctcaataggggaccactttgggaattgatcaaga 352
Query: 2974 atccaagacatggcaaaccagatttcacagataacagatatgagccacaaagcaaatgca 3033
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 351 atccaagacatggcaaaccagatttcacagataaccgatatgagccacaaagcaaatgca 292
Query: 3034 tcattcaccggatgcatcactcggtagtggaagaagaaccccaaaaccacaagccgaata 3093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcattcaccggatgcatcactcggtagtggaagaagaaccccaaaaccacaagccgaata 232
Query: 3094 atgataatcatcctatatggattaatctggcttgatggaagtggaattttcctggacagt 3153
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 231 atgataatcatcctatatggattgatctggcttgatggaatcggaattttcctggacagc 172
Query: 3154 tgttgtcttgcttcatccattagtggtagatcagcatcgtcaccatcatcaccaccacca 3213
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 171 ggttgtcttgcttcatccattagtggtagatcagcatcatcaccgtcatcaccaccacca 112
Query: 3214 tcattccccgtctggtgcatcctctcttgtctctgcttccaattctccatccgttccttc 3273
|| |||| |||||||||||||||||| || |||||||||||| |||||||||| ||||||
Sbjct: 111 tcgttcctcgtctggtgcatcctctcctgcctctgcttccaactctccatccgctccttc 52
Query: 3274 caagcaacactaccatacccatatgcagcaagatcct 3310
|||||||||||||||||||||||||||||||||||||
Sbjct: 51 caagcaacactaccatacccatatgcagcaagatcct 15
>gb|CF073359.1|CF073359 FE1_22_A05.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_A05_A002 5', mRNA sequence
Length = 594
Score = 914 bits (461), Expect = 0.0
Identities = 524/545 (96%)
Strand = Plus / Minus
Query: 3299 cagcaagatccttggatgggtccatagacctgggttgcacaggtaagctgggatccgcat 3358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cagcaagatccttggatgggtccatagacctgggttgcacaggtaagctgggatccgcat 535
Query: 3359 aaggaaggggatgtatcctctttcccccaccacccatgaaagaaggcaccagcgcgtgct 3418
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 534 aaggaaggggatggatcctctttcccccaccgcccatgaaagaaggcaccagcgcgtgct 475
Query: 3419 gctccggtgggatgtcatccaccatttgcccgttggtgaggagtggaacattggggttga 3478
||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 474 gctccggtgggatgtcatcgaccatctgcccattggtgaggagtggaacattggggttga 415
Query: 3479 gctggaaagcttgtggcgcgccattagggtcacctccacggccgtagctcatgtggccgt 3538
||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||| || |
Sbjct: 414 gctggaaaggttgtggcacgccattagcgtcgcctccacggccgtagctcatgtgaccat 355
Query: 3539 agagcatggactcggccacagactgcgagtcatggccgtcccagttgaactcgttgtcca 3598
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 354 agagcatggactcggccacagactgcgagtcatggccgttccagttgaactcgttgtcga 295
Query: 3599 ggtcatcgacgccgtcctcctcctcgtcaccggtcacacgttggcagcccttgaggcgct 3658
|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 294 tgtcatcgacgccgtcctcctcctcatcaccggtcacacgctggcagcccttgaggcgct 235
Query: 3659 tgtatcgagtcttgcactgggggcagttctgcgtgccctcccggcgctcgtattcgtagc 3718
||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 234 tgtatcgggtcttgcactgggggcagttctgcgtgccctcccggcgttcgtactcgtagc 175
Query: 3719 agtcccggcagacggggaaggcgcactcgttgcacgccacgaaggggtccccgccggggg 3778
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 174 agtcccggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgccggggg 115
Query: 3779 caaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgctcccgcggcggct 3838
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 114 caaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgctcccgcagcggct 55
Query: 3839 tcggc 3843
|||||
Sbjct: 54 tcggc 50
>gb|CF428798.1|CF428798 PH1_17_F11.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_F11_A002 5', mRNA sequence
Length = 749
Score = 860 bits (434), Expect = 0.0
Identities = 567/607 (93%), Gaps = 7/607 (1%)
Strand = Plus / Minus
Query: 3446 gcccgttggtgaggagtggaacattggggttgagctggaaagcttgtggcgcgccattag 3505
|||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 749 gcccattggtgaggagtggaacattggggttgagctggaaaggttgtggcacgccattag 690
Query: 3506 ggtcacctccacggccgtagctcatgtggccgtagagcatggactcggccacagactgcg 3565
||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 689 cgtcgcctccacggccgtagctcatgtgaccatagagcatggactcggccacagactgcg 630
Query: 3566 agtcatggccgtcccagttgaactcgttgtccaggtcatcgacgccgtcctcctcctcgt 3625
|||||||||||| |||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 629 agtcatggccgttccagttgaactcgttgtcgatgtcatcgacgccgtcctcctcctcat 570
Query: 3626 caccggtcacacgttggcagcccttgaggcgcttgtatcgagtcttgcactgggggcagt 3685
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 569 caccggtcacacgctggcagcccttgaggcgcttgtatcgggtcttgcactgggggcagt 510
Query: 3686 tctgcgtgccctcccggcgctcgtattcgtagcagtcccggcagacggggaaggcgcact 3745
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 509 tctgcgtgccctcccggcgctcgtactcgtagcagtcccggcagacggggaaggcgcact 450
Query: 3746 cgttgcacgccacgaaggggtccccgccgggggcaaggccgacgtcgtcgccgcaaatct 3805
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cgttgcacgccacgaagggctccccgccgggggcaaggccgacgtcgtcgccgcaaatct 390
Query: 3806 ggcacacctgcccgttctgctcccgcggcggcttcggcccgggatcgccgtcgcggcgga 3865
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 389 ggcacacctgcccgttctgctcccgcagcggcttcggcccgggatcgccgtcgcggcgga 330
Query: 3866 tgacgacgagctcgttgcggttgtgggagccggccaccagcccggcgctcgcctccatcg 3925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgacgacgagctcgttgcggttgtgggagccggccaccagcccggcgctcgcctccatcg 270
Query: 3926 cttcctcccctccacttc--cgccgccgacgaaggcagaggatactgacc-gtagctcct 3982
||||||||||||| | || | ||| |||||| | |||||||||||| ||||||||
Sbjct: 269 cttcctcccctcctcctcctccccgaagacgaaaccgcaggatactgaccggtagctccg 210
Query: 3983 ctcactctagcagcagatcctcatcccccgagtggtttctcaccgaacgccgagccgcgc 4042
||| ||||||||||||||| ||| |||||| | |||||||||| ||||| |||||||
Sbjct: 209 ctcgctctagcagcagatctccat---ccgagt-gattctcaccgagcgccgcgccgcgc 154
Query: 4043 cacgccg 4049
| |||||
Sbjct: 153 cgcgccg 147
>gb|CN128155.1|CN128155 RHOH1_27_H08.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_27_H08_A002 3', mRNA sequence
Length = 783
Score = 860 bits (434), Expect = 0.0
Identities = 665/742 (89%)
Strand = Plus / Minus
Query: 1892 tagtcttcttcttttgcttcctattgccaaagcagcaacagcaaaagcaccacttgggcc 1951
||||||||||||| |||||| || ||||| ||||||||||||| ||||||||| ||||
Sbjct: 744 tagtcttcttcttggtcttcctgttaccaaaacagcaacagcaaatgcaccactttggcc 685
Query: 1952 agcagttgcaagtccttgatggtggcttctttgttttgggggcatcataaccatataatg 2011
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 684 agcagttgcaagtccttgatggtggcttctttgttttgggtgcgtcatagccatataatg 625
Query: 2012 cctgccttctaaatacacatccagtaccaacataaattggaccctgaataccatccaaac 2071
||||||| || || |||||||| |||||||| ||||| || || || |||||||||||||
Sbjct: 624 cctgcctcctgaagacacatcctgtaccaacgtaaatggggccttggataccatccaaac 565
Query: 2072 ctttcatgttgatatcaaaaaagacaacattccggttagcatatcggtcatggcgatcaa 2131
|||||||||||||||| |||||||||||||| | |||||||||||| ||||| |||||||
Sbjct: 564 ctttcatgttgatatcgaaaaagacaacatttctgttagcatatcgatcatgacgatcaa 505
Query: 2132 tcccatcaaatctttgagggaactgtacatagcaaaccttctttcctagtaaagggtcca 2191
||||||| ||||||||||| ||||| ||||||||||| |||||||| || ||||| ||||
Sbjct: 504 tcccatcgaatctttgaggaaactgcacatagcaaactttctttccaagcaaaggatcca 445
Query: 2192 tcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatcacaatcca 2251
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 444 tcataaaacacattgcttcctttatagccttactattattgatgtagtgatcacaatcca 385
Query: 2252 agtttaacaaatatggagcatttgttagtacagcagagactcggaccaatgcattcatag 2311
|||| | |||||| || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 384 agttcagcaaataaggtgcattagttagtacagcagagactcggaccaatgcattcatag 325
Query: 2312 caccagctttcttatgatggttatagcctggtcgtttctctctagaaacataaaccaatc 2371
||||||| ||||||||||||| ||||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 324 caccagccttcttatgatggtcatagcctggccgtttttctcttgaaacgtaaaccaatc 265
Query: 2372 gtggcagttcatttccctcacagtcaaggcctccgctttggccaaggaagacctgaatca 2431
| ||||| |||||||| || |||| |||| || ||||| ||||| || ||||||||||
Sbjct: 264 gaggcagctcatttccttccacgtcatggccaccactttgaccaagaaaaacctgaatca 205
Query: 2432 ttccaggatgatcacgaacattgtttccaggccagggggttccatcttgcattgtccatc 2491
|||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||
Sbjct: 204 ttccaggatgatcacgaacattgtttccaggccatggtgtcccatcctgcattgtccatc 145
Query: 2492 cttcttcaggaactttctgggctttggcaactaaggcattgattctcaccttgaattcct 2551
|||| ||||| || || |||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 144 cttcctcaggtaccttttgggctttagcaaccaaggcattgattctaaccttgaattcct 85
Query: 2552 catactctctcttcattgctctcctctccctaacaaagtttgctgccaccttgtctttca 2611
| |||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||
Sbjct: 84 cgtactctctcttcattgctctccgttctctaacgaagtttggcgccaccttgtctttca 25
Query: 2612 agtagtctatcttctgttggaa 2633
|||||||||||||||||||||
Sbjct: 24 ggtagtctatcttctgttggaa 3
>gb|CF433027.1|CF433027 NIT1_20_E12.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_20_E12_A002 5', mRNA sequence
Length = 436
Score = 722 bits (364), Expect = 0.0
Identities = 412/428 (96%)
Strand = Plus / Minus
Query: 1089 agcaaagaggtgtgaggacacacctccaatgacccagaactgctcattcctccaccagtc 1148
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 436 agcaaagaggtgcgaggacacacctccaatgacccagaactgctcattcctccaccaatc 377
Query: 1149 atcaattccaacaccactccatctcatttctaggatgctcgtagcaaaaatgcagataaa 1208
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 376 atcaattccaacaccactccatctcatttctaggatgcttgtagcaaaaatgcaaataaa 317
Query: 1209 aagtgacatgaaccacaggctggcaacattattcagctctggagtgataaatttccctgt 1268
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 316 gagtgacatgaaccacaggctggcaacattattcaactctggagtgataaatttccccgt 257
Query: 1269 caataaacagatggcaggcaatgtacagtaagccaagaggggaatagatgtccaaggata 1328
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 256 caataaacaaatggcaggcaatgtacagtaagccaaaaggggaatagatgtccaaggata 197
Query: 1329 cacgatggagttgatgtaggaaaatctttccaaaaatttcagaccgccaccatacccata 1388
||| |||||||||||||||||||||||||||| ||||||||| || || |||||||||||
Sbjct: 196 cacaatggagttgatgtaggaaaatctttccagaaatttcaggccaccgccatacccata 137
Query: 1389 ccaaagagggcaatgattgctgaagaagatctcaatagacccaagagcccaccgaagcac 1448
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 136 ccaaagagggcaatgattgctgaagaagatttcaatagacccaagagcccaacgaagcac 77
Query: 1449 ctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacccgtttagg 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacccgtttagg 17
Query: 1509 tatgcagt 1516
||||||||
Sbjct: 16 tatgcagt 9
>gb|BG412467.1|BG412467 OV2_34_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 671
Score = 712 bits (359), Expect = 0.0
Identities = 546/599 (91%), Gaps = 22/599 (3%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 592 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 533
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 532 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 473
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 472 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 416
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 415 gctgtattccacggcccaactgcacaagcattgccgcagcctccattctcccc-agtata 357
Query: 513 tctctcagatattaagt--aggttc-accatggatcaaaagaaacttgggacatttcatg 569
|||| |||||||| || |||||| ||||||||||||||||||| |||||||| |
Sbjct: 356 tctc--agatattaggttgaggttccaccatggatcaaaagaaacacaagacatttcg-g 300
Query: 570 tctcttatctacaga-----cactg--aatatggggacaaacaccagaaaatatacttc- 621
||||||||||||||| || || |||||||||||||||||| | ||| |||||||
Sbjct: 299 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 240
Query: 622 --aagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 239 tcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccac 180
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccgaacccaaagga 739
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 179 actcctcaagaagtggaccatcatcctttgcaaggaaaggatcaatccgaacccaaagga 120
Query: 740 gcgagaagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgtttt 799
| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 119 gtgagaagattgaagccagcagaatggaccacacgatgacaattgttggtgtcctgtttt 60
Query: 800 gccttccaaccaaacctttgagaaagggataaagatggacaatcacccaaaatgcaaag 858
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 59 gccttccaaccaaacctttgaggaagggatacagatggacaatcacccaaaatgcaaag 1
Score = 105 bits (53), Expect = 3e-020
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 225 tttctagtatagacgaacatgtaatgaacaagccctccaatgaacaggcatacataa 281
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 654 tttctagtatagacgaacatgtaatgaacaagccctccaatgagcaggcatacataa 598
>gb|CF432727.1|CF432727 NIT1_18_C04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA
clone NIT1_18_C04_A002 5', mRNA sequence
Length = 627
Score = 664 bits (335), Expect = 0.0
Identities = 544/613 (88%), Gaps = 3/613 (0%)
Strand = Plus / Minus
Query: 2665 taccgtttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttca 2724
|||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 613 taccttttgcagaaaggaacccatttctttgcaaattcagatgtctcagacaatgcttca 554
Query: 2725 aacgttagcattgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataa 2784
|| || ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 553 aatgtcagcatggcagcaccatcatcagaaacatagcatgaaaccttatcaactggataa 494
Query: 2785 tccaccgaaaggatagatagaacagtatttgttgtgaccaaaggaggttcctttaaggga 2844
||||||||| ||||||||||||||||||||| |||| | || ||||||||||| ||||||
Sbjct: 493 tccaccgaatggatagatagaacagtatttgctgtgcctaatggaggttccttcaaggga 434
Query: 2845 tcaaccgtactgacaaagaaatcaattggagcaagttgagatggctggccttccttgtcg 2904
||||||||||||||||||||||| || || || |||||||| ||||| |||||||||||
Sbjct: 433 tcaaccgtactgacaaagaaatccataggggcgagttgagaaggctgcccttccttgtca 374
Query: 2905 aacctcagtgacagccggtctaggtaagtctctctctcaatagggaaccactttgggaat 2964
||||||| | ||||||||| || || || || ||||| ||||| ||||||||||| ||
Sbjct: 373 aacctcaaagtcagccggtcaagataggtttccctctcgataggaaaccactttggaaac 314
Query: 2965 tgatcaagaatccaagacatggcaaaccagatttcacagataacagatatgagccacaaa 3024
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 313 tgatcaagaatccaagacatggcaaaccaaatttcacagatcacagatatgagccataaa 254
Query: 3025 gcaaatgcatcattcaccggatgcatcactcggtagtggaagaagaaccccaaaaccaca 3084
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcaaatgcatcaggcaccggatgcatcactcggtagtggaagaagaaccccaaaaccact 194
Query: 3085 agccgaataatgataatcatcctatatggattaatctggcttgatggaagtggaattttc 3144
|||||||| ||||||||||||||||| || || || |||||||| ||||| ||||| ||
Sbjct: 193 agccgaattatgataatcatcctataggggttgatttggcttgaaggaagcggaatcttt 134
Query: 3145 ctggacagttgttgtcttgcttcatccattagtggtagatcagcatcgtcaccatcatc- 3203
||||||| | | ||||| ||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 133 ctggacaatggctgtctagcttcatccattagtggtagatctgcatcatcgccatcatcg 74
Query: 3204 --accaccaccatcattccccgtctggtgcatcctctcttgtctctgcttccaattctcc 3261
||||||||| || |||| || ||||||||||||||| || |||||||||| |||||
Sbjct: 73 ttaccaccaccgtcgttcctcgcctggtgcatcctctcctgcttctgcttccagctctcc 14
Query: 3262 atccgttccttcc 3274
|||| |||||||
Sbjct: 13 atcctctccttcc 1
>gb|CW319522.1|CW319522 104_812_11474531_148_35892_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474531, DNA
sequence
Length = 715
Score = 660 bits (333), Expect = 0.0
Identities = 517/569 (90%), Gaps = 22/569 (3%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 503
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 502 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 443
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 442 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 386
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 385 gctgtattccacggcccaactgcacaagcattgccgcagcctccattctcccc-agtata 327
Query: 513 tctctcagatattaagt--aggttc-accatggatcaaaagaaacttgggacatttcatg 569
|||| |||||||| || |||||| ||||||||||||||||||| |||||||| |
Sbjct: 326 tctc--agatattaggttgaggttccaccatggatcaaaagaaacacaagacatttcg-g 270
Query: 570 tctcttatctacaga-----cactg--aatatggggacaaacaccagaaaatatacttc- 621
||||||||||||||| || || |||||||||||||||||| | ||| |||||||
Sbjct: 269 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 210
Query: 622 --aagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 209 tcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccac 150
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccgaacccaaagga 739
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 149 actcctcaagaagtggaccatcatcctttgcaaggaaaggatcaatccgaacccaaagga 90
Query: 740 gcgagaagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgtttt 799
| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 89 gtgagaagattgaagccagcagaatggaccacacgatgacaattgttggtgtcctgtttt 30
Query: 800 gccttccaaccaaacctttgagaaaggga 828
|||||||||||||||||||||| ||||||
Sbjct: 29 gccttccaaccaaacctttgaggaaggga 1
Score = 135 bits (68), Expect = 4e-029
Identities = 137/156 (87%), Gaps = 8/156 (5%)
Strand = Plus / Minus
Query: 126 aaatttcacaaaaccaactcagatgattacagtacacaacaaaaaacaggcgcatttaca 185
||||||| |||||||||||| | ||||||||||||| ||||||||||| ||| ||||||
Sbjct: 715 aaatttcccaaaaccaactccaacgattacagtacacgacaaaaaacagacgcctttaca 656
Query: 186 tactttaattaactatagattaatgctaatattctgttttttctagtatagacgaacatg 245
|| ||||| ||||||||||| |||||| |||| ||| ||||||||||||||||||
Sbjct: 655 taa---aatta--tatagattaatactaata--ctgtcttt-ctagtatagacgaacatg 604
Query: 246 taatgaacaagccctccaatgaacaggcatacataa 281
|||||||||||||||||||||| |||||||||||||
Sbjct: 603 taatgaacaagccctccaatgagcaggcatacataa 568
>gb|BG465562.1|BG465562 RHIZ2_46_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 580
Score = 634 bits (320), Expect = e-179
Identities = 503/564 (89%)
Strand = Plus / Minus
Query: 2452 ttgtttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctgg 2511
||||||||||||||| || ||||||||||||||||||||||||| |||||||| || |||
Sbjct: 572 ttgtttccaggccagaggcttccatcttgcattgtccatccttcctcaggaaccttttgg 513
Query: 2512 gctttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgct 2571
||||| ||||| ||||| ||||| || |||||||||||||| || ||||||||||||||
Sbjct: 512 gcttttgcaaccaaggcgttgatccttaccttgaattcctcgtattctctcttcattgcc 453
Query: 2572 ctcctctccctaacaaagtttgctgccaccttgtctttcaagtagtctatcttctgttgg 2631
||||||||||||||||| || || ||||||||||||| |||||||||||||||||||
Sbjct: 452 ctcctctccctaacaaatgaagcggcaaccttgtctttcaggtagtctatcttctgttgg 393
Query: 2632 aagtaccactctggagcgcgaggttcaatattgtaccgtttgcagaaaggaacccatttc 2691
||||||||||| ||||| ||||| |||| ||| || |||||||||||||||||||||
Sbjct: 392 aagtaccactcaggagcacgaggctcaagattaaactttttgcagaaaggaacccatttt 333
Query: 2692 tttgcaaattcagatgtttcagataatgcttcaaacgttagcattgcagcaccatcatca 2751
||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 332 tttgcaaattcagatgtttcagacaacgcttcaaacgtaagcattgcagcaccatcatca 273
Query: 2752 gaaacatagcaagaaaccttatcaacaggataatccaccgaaaggatagatagaacagta 2811
||||||||||| || ||||| ||||| ||||||||||| |||||||| || || |||||
Sbjct: 272 gaaacatagcaggagaccttctcaaccggataatccacggaaaggatggaaaggacagtg 213
Query: 2812 tttgttgtgaccaaaggaggttcctttaagggatcaaccgtactgacaaagaaatcaatt 2871
|| | ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 212 ttcgctgtgaccaagggaggttcctttgagggatcaaccgtactgacaaagaagtcaatc 153
Query: 2872 ggagcaagttgagatggctggccttccttgtcgaacctcagtgacagccggtctaggtaa 2931
|||||||| ||||| || || ||||||||||| ||||| ||||||| ||||| ||||||
Sbjct: 152 ggagcaagctgagagggttgaccttccttgtcaaaccttagtgacaaacggtccaggtaa 93
Query: 2932 gtctctctctcaatagggaaccactttgggaattgatcaagaatccaagacatggcaaac 2991
|||||||||||||| || | |||||||||||| |||||||||||||| ||||||||||||
Sbjct: 92 gtctctctctcaattggaagccactttgggaactgatcaagaatccaggacatggcaaac 33
Query: 2992 cagatttcacagataacagatatg 3015
||||||||||||||||||||||||
Sbjct: 32 cagatttcacagataacagatatg 9
>gb|CX621309.1|CX621309 GABR1_57_H04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H04_A002 3', mRNA sequence
Length = 708
Score = 620 bits (313), Expect = e-175
Identities = 494/545 (90%), Gaps = 22/545 (4%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 538 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 479
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 478 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 419
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 418 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 362
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 361 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 303
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 302 --tctcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-gg 246
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---ct 619
||||||||||||| |||| || |||||||||||||||||| | ||| ||| ||
Sbjct: 245 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 186
Query: 620 tcaagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 185 tcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccac 126
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccgaacccaaagga 739
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 125 actcctcaagaagtggaccatcatcctttgcaaggaaaggatcaatccgaacccaaagga 66
Query: 740 gcgagaagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgtttt 799
| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 65 gtgagaagattgaagccagcagaatggaccacacgatgacaattgttggtgtcctgtttt 6
Query: 800 gcctt 804
|||||
Sbjct: 5 gcctt 1
Score = 147 bits (74), Expect = 9e-033
Identities = 146/166 (87%), Gaps = 8/166 (4%)
Strand = Plus / Minus
Query: 116 ctttctacgaaaatttcacaaaaccaactcagatgattacagtacacaacaaaaaacagg 175
||||||| ||||||||| |||||||||||| | ||||||||||||| |||||||||||
Sbjct: 701 ctttctatgaaaatttcccaaaaccaactccaacgattacagtacacgacaaaaaacaga 642
Query: 176 cgcatttacatactttaattaactatagattaatgctaatattctgttttttctagtata 235
||| |||||||| ||||| ||||||||||| |||||| |||| ||| ||||||||
Sbjct: 641 cgcctttacataa---aatta--tatagattaatactaata--ctgtcttt-ctagtata 590
Query: 236 gacgaacatgtaatgaacaagccctccaatgaacaggcatacataa 281
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 589 gacgaacatgtaatgaacaagccctccaatgagcaggcatacataa 544
>gb|BF480979.1|BF480979 FM1_15_G12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 721
Score = 618 bits (312), Expect = e-175
Identities = 530/600 (88%), Gaps = 2/600 (0%)
Strand = Plus / Minus
Query: 652 ctgacatcctagttgcaatccaaaccacactcctcaagaagcggaccatcatccttcgca 711
||||| |||||||||||||||||||| || ||||| | || ||||||||||||||||||
Sbjct: 604 ctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatccttcgca 545
Query: 712 aggaaaggatcaatccgaacccaaaggagcgagaagattgaagccagcagaatggaccag 771
||||||||||| ||||| ||||| || ||||||||||||||||||| || |||||||||
Sbjct: 544 aggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatggaccag 485
Query: 772 acgatgacaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataa 831
|| |||||||| ||||| || ||||| ||||| ||||||| ||| ||||| || || |||
Sbjct: 484 acaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaatgggtaa 425
Query: 832 agatggacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactca 891
||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 424 agatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggcccccatgattca 365
Query: 892 tatccgttattgatcgcatttgaaacgccagcgaccacaccaatgaagttcaatagaagc 951
||||| || ||||| ||||| ||||||||||| || || |||||||| |||| |||||||
Sbjct: 364 tatccattgttgattgcattggaaacgccagctactactccaatgaaattcagtagaagc 305
Query: 952 aaggtggtaggaggtatcaataaggtagtccatttgaatgtatatagctctgagaactcc 1011
| |||||| |||||||||| | ||| |||||||||||||| || |||||||||||||||
Sbjct: 304 agggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctgagaactcc 245
Query: 1012 tcatcatctccaccctttgatgtcacggtgaagcttgtatcaacaccagctatgaccttg 1071
|| || ||||||||||| |||||||| |||||||| || || ||||||||||||||||||
Sbjct: 244 tcgtcgtctccacccttggatgtcacagtgaagctcgtgtctacaccagctatgaccttg 185
Query: 1072 agaagtccctggaacacagcaaagaggtgtgaggacacacctccaatgacccagaactgc 1131
|| ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 184 aggagtccttggaacacagcaaagagatgtgaagacacacctccaatgacccaaaactgc 125
Query: 1132 tcattcctccaccagtcatcaattccaacaccactccatctcatttctaggatgctcgta 1191
||||| |||||||| ||||| || || |||||||||||||||||||| ||||||||||||
Sbjct: 124 tcatttctccaccaatcatcgatgcctacaccactccatctcatttccaggatgctcgta 65
Query: 1192 gcaaaaatgcagataaaaagtgacatg-aaccacaggctggcaacattattcagctctgg 1250
||||||||||||||||||||||||||| ||||| | |||||||||||| || ||||||||
Sbjct: 64 gcaaaaatgcagataaaaagtgacatgaaaccaga-gctggcaacattgttaagctctgg 6
>gb|BF481056.1|BF481056 FM1_15_G12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 540
Score = 611 bits (308), Expect = e-172
Identities = 482/540 (89%)
Strand = Plus / Minus
Query: 2213 ttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatatggagcat 2272
|||||||||| || || |||||||||||||||||||||||||| | |||||| || ||||
Sbjct: 540 ttatagccttactattattgatgtagtgatcacaatccaagttcagcaaataaggtgcat 481
Query: 2273 ttgttagtacagcagagactcggaccaatgcattcatagcaccagctttcttatgatggt 2332
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 480 tagttagtacagcagagactcggaccaatgcattcatagcaccagccttcttatgatggt 421
Query: 2333 tatagcctggtcgtttctctctagaaacataaaccaatcgtggcagttcatttccctcac 2392
||||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 420 catagcctggccgtttttctcttgaaacgtaaaccaatcgaggcagctcatttccttcca 361
Query: 2393 agtcaaggcctccgctttggccaaggaagacctgaatcattccaggatgatcacgaacat 2452
|||| |||| || ||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 360 cgtcatggccaccactttgaccaagaaaaacctgaatcattccaggatgatcacgaacat 301
Query: 2453 tgtttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctggg 2512
||||||||||||| || || ||||| ||||||||||||||||| ||||| || || ||||
Sbjct: 300 tgtttccaggccatggtgtcccatcctgcattgtccatccttcctcaggtaccttttggg 241
Query: 2513 ctttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
|||| ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 240 ctttagcaaccaaggcattgattctaaccttgaattcctcgtactctctcttcattgctc 181
Query: 2573 tcctctccctaacaaagtttgctgccaccttgtctttcaagtagtctatcttctgttgga 2632
||| || ||||| ||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct: 180 tccgttctctaacgaagtttggcgccaccttgtctttcaggtagtctatcttttgttgga 121
Query: 2633 agtaccactctggagcgcgaggttcaatattgtaccgtttgcagaaaggaacccatttct 2692
| |||||||||||||| ||||| |||| | |||| |||||||||||||||||||||||
Sbjct: 120 aataccactctggagcacgaggctcaaggctataccttttgcagaaaggaacccatttct 61
Query: 2693 ttgcaaattcagatgtttcagataatgcttcaaacgttagcattgcagcaccatcatcag 2752
|||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||
Sbjct: 60 ttgcaaattcagatgtttcagacaatgcttcaaatgtcagcatggcagcaccatcatcag 1
>gb|BG102383.1|BG102383 RHIZ2_23_A10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 491
Score = 545 bits (275), Expect = e-152
Identities = 428/479 (89%)
Strand = Plus / Minus
Query: 2542 ttgaattcctcatactctctcttcattgctctcctctccctaacaaagtttgctgccacc 2601
||||||||||| || |||||||||||||| ||||||||||||||||| || || |||
Sbjct: 491 ttgaattcctcgtattctctcttcattgccctcctctccctaacaaatgaagcggcaacc 432
Query: 2602 ttgtctttcaagtagtctatcttctgttggaagtaccactctggagcgcgaggttcaata 2661
|||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||| |
Sbjct: 431 ttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctcaaga 372
Query: 2662 ttgtaccgtttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgct 2721
|| || ||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 371 ttaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaacgct 312
Query: 2722 tcaaacgttagcattgcagcaccatcatcagaaacatagcaagaaaccttatcaacagga 2781
|||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| |||
Sbjct: 311 tcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaaccgga 252
Query: 2782 taatccaccgaaaggatagatagaacagtatttgttgtgaccaaaggaggttcctttaag 2841
|||||||| |||||||| || || ||||| || | ||||||||| |||||||||||| ||
Sbjct: 251 taatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgag 192
Query: 2842 ggatcaaccgtactgacaaagaaatcaattggagcaagttgagatggctggccttccttg 2901
||||||||||||||||||||||| ||||| |||||||| ||||| || || |||||||||
Sbjct: 191 ggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgaccttccttg 132
Query: 2902 tcgaacctcagtgacagccggtctaggtaagtctctctctcaatagggaaccactttggg 2961
|| ||||| ||||||| ||||| |||||||||||||||||||| || | ||||||||||
Sbjct: 131 tcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccactttggg 72
Query: 2962 aattgatcaagaatccaagacatggcaaaccagatttcacagataacagatatgagcca 3020
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatgagcca 13
>gb|BG933529.1|BG933529 WS1_4_E04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 466
Score = 533 bits (269), Expect = e-149
Identities = 420/464 (90%), Gaps = 16/464 (3%)
Strand = Plus / Minus
Query: 503 ccccagtatatctctcagatattaagt--aggttc-accatggatcaaaagaaacttggg 559
|||||||||||||| |||||||| || |||||| ||||||||||||||||||| |
Sbjct: 462 ccccagtatatctc--agatattaggttgaggttccaccatggatcaaaagaaacacaag 405
Query: 560 acatttcatgtctcttatctaca-----gacactg--aatatggggacaaacaccagaaa 612
||||||| |||||||||||||| |||| || |||||||||||||||||| | ||
Sbjct: 404 acatttc-ggtctcttatctacagaggggacattgtaaatatggggacaaacaccggcaa 346
Query: 613 atata---cttcaagcatatgcagattgggggagctgatgcactgacatcctagttgcaa 669
| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 345 aaatacttcttcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaa 286
Query: 670 tccaaaccacactcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccga 729
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 285 tccaaaccacactcctcaagaagtggaccatcatcctttgcaaggaaaggatcaatccga 226
Query: 730 acccaaaggagcgagaagattgaagccagcagaatggaccagacgatgacaatcgttggt 789
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 225 acccaaaggagtgagaagattgaagccagcagaatggaccacacgatgacaattgttggt 166
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 165 gtcctgttttgccttccaaccaaacctttgaggaagggatacagatggacaatcacccaa 106
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgttattgatcgca 909
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 105 aatgcaaagaagagcttcccaaagaggggaccccatgactcatatccgttattgattgcg 46
Query: 910 tttgaaacgccagcgaccacaccaatgaagttcaatagaagcaa 953
|| ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 45 ttggaaacaccagcaaccacaccaatgaagttcaataggagcaa 2
>gb|CF073274.1|CF073274 FE1_22_A05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_A05_A002 3', mRNA sequence
Length = 458
Score = 533 bits (269), Expect = e-149
Identities = 317/333 (95%)
Strand = Plus / Minus
Query: 1752 tttttgttgatttacaataccggccttttcattctcagctcctggagcagcttcgtcaat 1811
|||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 458 tttttggtgatttacaataccagctttttcattctcagctcctggagcagcttcatcaat 399
Query: 1812 ttcaccaagagcatatgcaggggattggttctcttctttcttgaaaaataataacttttt 1871
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 398 ttcaccaagagcatatgcaggggattgattttcttctttcttgaaaaataataatttttt 339
Query: 1872 cttctctgttttgggtttggtagtcttcttcttttgcttcctattgccaaagcagcaaca 1931
|||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 338 cttctccgtttttggtttggtagtcttcttcttgtgcttcctattaccaaagcagcaaca 279
Query: 1932 gcaaaagcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttggg 1991
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 278 gcaaaagcaccacttcggccagcagttgcaagtccttggtggtggcttctttgttttggg 219
Query: 1992 ggcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattgg 2051
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 218 ggcatcataaccatataatgcctgccttctaaatacacatccagtaccgacataaatcgg 159
Query: 2052 accctgaataccatccaaacctttcatgttgat 2084
||||||||||||||||||||||||||| |||||
Sbjct: 158 accctgaataccatccaaacctttcatattgat 126
>gb|CF073271.1|CF073271 FE1_22_H04.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_22_H04_A002 3', mRNA sequence
Length = 572
Score = 511 bits (258), Expect = e-142
Identities = 303/318 (95%)
Strand = Plus / Minus
Query: 1767 aataccggccttttcattctcagctcctggagcagcttcgtcaatttcaccaagagcata 1826
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 572 aataccagctttttcattctcagctcctggagcagcttcatcaatttcaccaagagcata 513
Query: 1827 tgcaggggattggttctcttctttcttgaaaaataataactttttcttctctgttttggg 1886
|||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 512 tgcaggggattgattttcttctttcttgaaaaataataattttttcttctccgtttttgg 453
Query: 1887 tttggtagtcttcttcttttgcttcctattgccaaagcagcaacagcaaaagcaccactt 1946
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 452 tttggtagtcttcttcttgtgcttcctattaccaaagcagcaacagcaaaagcaccactt 393
Query: 1947 gggccagcagttgcaagtccttgatggtggcttctttgttttgggggcatcataaccata 2006
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 392 cggccagcagttgcaagtccttggtggtggcttctttgttttgggggcatcataaccata 333
Query: 2007 taatgcctgccttctaaatacacatccagtaccaacataaattggaccctgaataccatc 2066
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 332 taatgcctgccttctaaatacacatccagtaccgacataaatcggaccctgaataccatc 273
Query: 2067 caaacctttcatgttgat 2084
|||||||||||| |||||
Sbjct: 272 caaacctttcatattgat 255
Score = 285 bits (144), Expect = 2e-074
Identities = 147/148 (99%)
Strand = Plus / Minus
Query: 2089 aaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctttga 2148
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aaaaagacaacattcctgttagcatatcggtcatggcgatcaatcccatcaaatctttga 89
Query: 2149 gggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacattgct 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacattgct 29
Query: 2209 tcctttatagccttgctgttgttgatgt 2236
||||||||||||||||||||||||||||
Sbjct: 28 tcctttatagccttgctgttgttgatgt 1
>gb|CD461570.1|CD461570 SA1_33_E06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_33_E06_A002 3', mRNA sequence
Length = 622
Score = 502 bits (253), Expect = e-139
Identities = 428/477 (89%), Gaps = 22/477 (4%)
Strand = Plus / Minus
Query: 279 taaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgccttattg 336
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 472 taaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgccttattg 413
Query: 337 agaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggctcagc 396
|||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |
Sbjct: 412 agaaccaagtttgtacacgggagcagtgcaaaatcaaaacaccttactgttcggctcacc 353
Query: 397 ccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatatgctg 456
| ||| || ||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 352 cgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catatgctg 296
Query: 457 tattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtatatctc 516
|||||||||||||||||||||||| |||||||||||||||||| | |||||||||| ||
Sbjct: 295 tattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata--tc 239
Query: 517 tcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatgtctc 573
|||||||||| || ||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 238 tcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-ggtctc 180
Query: 574 ttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---cttcaa 623
||||||||| |||| || |||||||||||||||||| | ||| ||| ||||||
Sbjct: 179 ttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttcttcaa 120
Query: 624 gcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccacactc 683
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 119 gcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccacactc 60
Query: 684 ctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccgaacccaaaggag 740
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 59 ctcaagaagtggaccatcatcctttgcaaggaaaggatcaatccgaacccaaaggag 3
Score = 123 bits (62), Expect = 1e-025
Identities = 128/146 (87%), Gaps = 8/146 (5%)
Strand = Plus / Minus
Query: 136 aaaccaactcagatgattacagtacacaacaaaaaacaggcgcatttacatactttaatt 195
|||||||||| | ||||||||||||| ||||||||||| ||| |||||||| ||||
Sbjct: 619 aaaccaactccaacgattacagtacacgacaaaaaacagacgcctttacataa---aatt 563
Query: 196 aactatagattaatgctaatattctgttttttctagtatagacgaacatgtaatgaacaa 255
| ||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||
Sbjct: 562 a--tatagattaatactaata--ctgtcttt-ctagtatagacgaacatgtaatgaacaa 508
Query: 256 gccctccaatgaacaggcatacataa 281
|||||||||||| |||||||||||||
Sbjct: 507 gccctccaatgagcaggcatacataa 482
>gb|CF428687.1|CF428687 PH1_17_F11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_F11_A002 3', mRNA sequence
Length = 617
Score = 496 bits (250), Expect = e-138
Identities = 428/478 (89%), Gaps = 22/478 (4%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 471 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 412
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 411 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 352
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 351 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 295
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 294 gctgtattccacggcccaactgcacaagcattgccgcagcctccattctcccc-agtata 236
Query: 513 tctctcagatattaagt--aggttc-accatggatcaaaagaaacttgggacatttcatg 569
|||| |||||||| || |||||| ||||||||||||||||||| |||||||| |
Sbjct: 235 tctc--agatattaggttgaggttccaccatggatcaaaagaaacacaagacatttcg-g 179
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatatacttc- 621
||||||||||||| || | || |||||||||||||||||| | ||| |||||||
Sbjct: 178 tctcttatctacagaggggatattgtaaatatggggacaaacaccggcaaaaatacttct 119
Query: 622 --aagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 118 tcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccac 59
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatccgaacccaaag 737
||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 58 actcctcaagaagtggaccatcatcctttgcaaggaaaggatcaacccgaacccaaag 1
Score = 115 bits (58), Expect = 3e-023
Identities = 127/146 (86%), Gaps = 8/146 (5%)
Strand = Plus / Minus
Query: 136 aaaccaactcagatgattacagtacacaacaaaaaacaggcgcatttacatactttaatt 195
|||||||||| | ||||||||||||| ||||||||||| ||| |||||||| ||||
Sbjct: 614 aaaccaactccaacgattacagtacacgacaaaaaacagacgcctttacataa---aatt 558
Query: 196 aactatagattaatgctaatattctgttttttctagtatagacgaacatgtaatgaacaa 255
| ||||||||||| |||||| |||| ||| ||||||||||||||||||||||| ||||
Sbjct: 557 a--tatagattaatactaata--ctgtcttt-ctagtatagacgaacatgtaatggacaa 503
Query: 256 gccctccaatgaacaggcatacataa 281
|||||||||||| |||||||||||||
Sbjct: 502 gccctccaatgagcaggcatacataa 477
>gb|BG241776.1|BG241776 RHIZ2_50_A08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 494 bits (249), Expect = e-137
Identities = 375/417 (89%)
Strand = Plus / Minus
Query: 2599 accttgtctttcaagtagtctatcttctgttggaagtaccactctggagcgcgaggttca 2658
||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 425 accttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctca 366
Query: 2659 atattgtaccgtttgcagaaaggaacccatttctttgcaaattcagatgtttcagataat 2718
| ||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 365 agattaaactttttgcagaaaggaacccatttttttgcaaattcagatgtttcagacaac 306
Query: 2719 gcttcaaacgttagcattgcagcaccatcatcagaaacatagcaagaaaccttatcaaca 2778
||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 305 gcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctcaacc 246
Query: 2779 ggataatccaccgaaaggatagatagaacagtatttgttgtgaccaaaggaggttccttt 2838
||||||||||| |||||||| || || ||||| || | ||||||||| ||||||||||||
Sbjct: 245 ggataatccacggaaaggatggaaaggacagtgttcgctgtgaccaagggaggttccttt 186
Query: 2839 aagggatcaaccgtactgacaaagaaatcaattggagcaagttgagatggctggccttcc 2898
||||||||||||||||||||||||| ||||| |||||||| ||||| || || ||||||
Sbjct: 185 gagggatcaaccgtactgacaaagaagtcaatcggagcaagctgagagggttgaccttcc 126
Query: 2899 ttgtcgaacctcagtgacagccggtctaggtaagtctctctctcaatagggaaccacttt 2958
||||| ||||| ||||||| ||||| |||||||||||||||||||| || | |||||||
Sbjct: 125 ttgtcaaaccttagtgacaaacggtccaggtaagtctctctctcaattggaagccacttt 66
Query: 2959 gggaattgatcaagaatccaagacatggcaaaccagatttcacagataacagatatg 3015
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 65 gggaactgatcaagaatccaggacatggcaaaccagatttcacagataacagatatg 9
>gb|BF421749.1|BF421749 FM1_16_B07.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 495
Score = 492 bits (248), Expect = e-136
Identities = 420/468 (89%), Gaps = 22/468 (4%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 461 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 402
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 401 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 342
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 341 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 285
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 284 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 226
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 225 --tctcagatattaggttgaggttccaccatggatcaaaagaaacgcaagacatttc-gg 169
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---ct 619
||||||||||||| |||| || |||||||||||||||||| | ||| ||| ||
Sbjct: 168 tctcttatctacagaggcgacattgtaaatatggggacaaacaccggcaaaaatacttct 109
Query: 620 tcaagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 108 tcaagcatatgctgattgggggagctgatgtgctgacatcctagttgcaatccaaaccac 49
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaaggatcaatcc 727
||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 48 actcctcaagaagtggaccatcatcctttgcaaggaaaggatcaatcc 1
Score = 44.1 bits (22), Expect = 0.10
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 256 gccctccaatgaacaggcatacataa 281
|||||||||||| |||||||||||||
Sbjct: 493 gccctccaatgagcaggcatacataa 468
>gb|CW350793.1|CW350793 fsbb001f012e11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f012e11, DNA
sequence
Length = 826
Score = 486 bits (245), Expect = e-135
Identities = 281/293 (95%)
Strand = Plus / Minus
Query: 1792 cctggagcagcttcgtcaatttcaccaagagcatatgcaggggattggttctcttctttc 1851
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 425 cctggagcagcttcatcaatttcaccaagagcatatgcaggggattgattttcttctttc 366
Query: 1852 ttgaaaaataataactttttcttctctgttttgggtttggtagtcttcttcttttgcttc 1911
|||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 365 ttgaaaaataataattttttcttctccgtttttggtttggtagtcttcttcttgtgcttc 306
Query: 1912 ctattgccaaagcagcaacagcaaaagcaccacttgggccagcagttgcaagtccttgat 1971
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 305 ctattaccaaagcagcaacagcaaaagcaccacttcggccagcagttgcaagtccttgat 246
Query: 1972 ggtggcttctttgttttgggggcatcataaccatataatgcctgccttctaaatacacat 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggtggcttctttgttttgggggcatcataaccatataatgcctgccttctaaatacacat 186
Query: 2032 ccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgat 2084
|||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 185 ccagtaccgacataaatcggaccctgaataccatccaaacctttcatattgat 133
Score = 317 bits (160), Expect = 5e-084
Identities = 184/192 (95%)
Strand = Plus / Minus
Query: 1603 ccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttctttcaaaaga 1662
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 751 ccccagtctgtcttgtcttcataaccgcaactaatgacatgtatagcttctttcaaaaga 692
Query: 1663 gaagcaggacttgcactcttcaaggttccaccattctcgagaagtgtggatgtaaccaaa 1722
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 691 gaagcaggacttgcactcttcaaggttccaccattctcgagcagtgtggatgtaacaaag 632
Query: 1723 acagaagattggccaaatttcttttctaatttttgttgatttacaataccggccttttca 1782
|||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 631 acagaagactgaccaaatttcttttctaatttttgttgatttacaataccagctttttca 572
Query: 1783 ttctcagctcct 1794
||||||||||||
Sbjct: 571 ttctcagctcct 560
Score = 44.1 bits (22), Expect = 0.10
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2089 aaaaagacaacattccggttagcata 2114
|||||||||||||||| |||||||||
Sbjct: 26 aaaaagacaacattcctgttagcata 1
>gb|BG948517.1|BG948517 IP1_10_F08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 285
Score = 486 bits (245), Expect = e-135
Identities = 269/277 (97%)
Strand = Plus / Minus
Query: 1343 tgtaggaaaatctttccaaaaatttcagaccgccaccatacccataccaaagagggcaat 1402
|||||||||||||||||| ||||||||| || || |||||||||||||||||||||||||
Sbjct: 285 tgtaggaaaatctttccagaaatttcaggccaccgccatacccataccaaagagggcaat 226
Query: 1403 gattgctgaagaagatctcaatagacccaagagcccaccgaagcacctggtgaagacgat 1462
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 225 gattgctgaagaagatttcaatagacccaagagcccaacgaagcacctggtgaagacgat 166
Query: 1463 ctgaaagattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattg 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ctgaaagattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattg 106
Query: 1523 accgccaaccatgacaatgcatcttgaaaccagttagaatatcttctgtaactgatccat 1582
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 105 accgccaaccatgacaatgcattttgaaaccagttagaatatcttctgtaactgatccat 46
Query: 1583 agatccagccaatctcttttccccagtctgtcttgtc 1619
| |||||||||||||||||||||||||||||||||||
Sbjct: 45 aaatccagccaatctcttttccccagtctgtcttgtc 9
>gb|BG465791.1|BG465791 RHIZ2_48_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 614
Score = 470 bits (237), Expect = e-130
Identities = 495/581 (85%)
Strand = Plus / Minus
Query: 1198 atgcagataaaaagtgacatgaaccacaggctggcaacattattcagctctggagtgata 1257
|||||||| ||||||| ||||||||| | || || ||||| | |||||||| ||||||
Sbjct: 590 atgcagatgaaaagtgccatgaaccagatactagcgacattggtaagctctggtgtgata 531
Query: 1258 aatttccctgtcaataaacagatggcaggcaatgtacagtaagccaagaggggaatagat 1317
|||||||| || | | ||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 530 aatttccccgtgagcagacagatggcaggcaaggtacagtaagccaagagaggaatggat 471
Query: 1318 gtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccgcca 1377
||||| || || || || ||||||||||| ||||| |||||||||||||| || || |||
Sbjct: 470 gtccatgggtatacaatagagttgatgtaagaaaacctttccaaaaattttaggccacca 411
Query: 1378 ccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaagagcc 1437
||||| || |||||||| ||||| || ||||||||||| || |||| ||| |||||||||
Sbjct: 410 ccatatccgtaccaaagtgggcagtgcttgctgaagaaaatttcaacagatccaagagcc 351
Query: 1438 caccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgca 1497
|| ||||| ||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 350 caacgaaggacctggtgaagccggtcagaaagattcagaggtgcagaacctttgaatgca 291
Query: 1498 acccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaaccagtt 1557
||| || || ||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 290 ggccgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatcttaaatccagtc 231
Query: 1558 agaatatcttctgtaactgatccatagatccagccaatctcttttccccagtctgtcttg 1617
| ||||| ||||||| ||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 230 aagatatcctctgtaattgatccataaatccagccaatctctttcccccagtcagtcttg 171
Query: 1618 tcttcataaccacaactaatgacatgtatagcttctttcaaaagagaagcaggacttgca 1677
||||| || || || || || |||||||||||||| || | ||||||||| |||||||||
Sbjct: 170 tcttcgtagccgcagctgattacatgtatagcttcctttagaagagaagctggacttgca 111
Query: 1678 ctcttcaaggttccaccattctcgagaagtgtggatgtaaccaaaacagaagattggcca 1737
||| ||| ||| ||||||||||| |||||||| |||| ||| |||||||| || || |||
Sbjct: 110 ctcctcagggtcccaccattctcaagaagtgttgatgcaacaaaaacagatgactgccca 51
Query: 1738 aatttcttttctaatttttgttgatttacaataccggcctt 1778
||||||||||||| ||| |||||| ||||||| || |||||
Sbjct: 50 aatttcttttctagtttctgttgacttacaattccagcctt 10
>gb|CW350794.1|CW350794 fsbb001f012e11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f012e11, DNA
sequence
Length = 846
Score = 460 bits (232), Expect = e-127
Identities = 265/276 (96%)
Strand = Plus / Plus
Query: 1792 cctggagcagcttcgtcaatttcaccaagagcatatgcaggggattggttctcttctttc 1851
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 571 cctggagcagcttcatcaatttcaccaagagcatatgcaggggattgattttcttctttc 630
Query: 1852 ttgaaaaataataactttttcttctctgttttgggtttggtagtcttcttcttttgcttc 1911
|||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 631 ttgaaaaataataattttttcttctccgtttttggtttggtagtcttcttcttgtgcttc 690
Query: 1912 ctattgccaaagcagcaacagcaaaagcaccacttgggccagcagttgcaagtccttgat 1971
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 691 ctattaccaaagcagcaacagcaaaagcaccacttcggccagcagttgcaagtccttgat 750
Query: 1972 ggtggcttctttgttttgggggcatcataaccatataatgcctgccttctaaatacacat 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggtggcttctttgttttgggggcatcataaccatataatgcctgccttctaaatacacat 810
Query: 2032 ccagtaccaacataaattggaccctgaataccatcc 2067
|||||||| |||||||| ||||||||||||||||||
Sbjct: 811 ccagtaccgacataaatcggaccctgaataccatcc 846
Score = 331 bits (167), Expect = 3e-088
Identities = 191/199 (95%)
Strand = Plus / Plus
Query: 1596 ctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttcttt 1655
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 238 ctcttttccccagtctgtcttgtcttcataaccgcaactaatgacatgtatagcttcttt 297
Query: 1656 caaaagagaagcaggacttgcactcttcaaggttccaccattctcgagaagtgtggatgt 1715
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 298 caaaagagaagcaggacttgcactcttcaaggttccaccattctcgagcagtgtggatgt 357
Query: 1716 aaccaaaacagaagattggccaaatttcttttctaatttttgttgatttacaataccggc 1775
||| || |||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 358 aacaaagacagaagactgaccaaatttcttttctaatttttgttgatttacaataccagc 417
Query: 1776 cttttcattctcagctcct 1794
||||||||||||||||||
Sbjct: 418 tttttcattctcagctcct 436
Score = 295 bits (149), Expect = 2e-077
Identities = 155/157 (98%)
Strand = Plus / Plus
Query: 1441 cgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacc 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacc 60
Query: 1501 cgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaaccagttaga 1560
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 cgtttaggtatgcagtaaattgaccgccaaccatgacaatgcattttgaaaccagttaga 120
Query: 1561 atatcttctgtaactgatccatagatccagccaatct 1597
||||||||||||||||||||||| |||||||||||||
Sbjct: 121 atatcttctgtaactgatccataaatccagccaatct 157
>gb|BE362654.1|BE362654 DG1_88_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 548
Score = 456 bits (230), Expect = e-126
Identities = 464/542 (85%)
Strand = Plus / Minus
Query: 1081 tggaacacagcaaagaggtgtgaggacacacctccaatgacccagaactgctcattcctc 1140
|||||||| || ||||| |||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 543 tggaacaccgcgaagagatgtgcggaaacacctccaatgacccagaactgctcgtttctc 484
Query: 1141 caccagtcatcaattccaacaccactccatctcatttctaggatgctcgtagcaaaaatg 1200
||||||||||| || | |||||||||||||||||||| ||||||| || || ||||
Sbjct: 483 caccagtcatcgatggccacaccactccatctcatttcaaggatgccggtgacagcaatg 424
Query: 1201 cagataaaaagtgacatgaaccacaggctggcaacattattcagctctggagtgataaat 1260
||||| ||||||| ||||||||| | || || ||||| | |||||||| |||||||||
Sbjct: 423 cagatgaaaagtgccatgaaccagatactagcgacattggtaagctctggtgtgataaat 364
Query: 1261 ttccctgtcaataaacagatggcaggcaatgtacagtaagccaagaggggaatagatgtc 1320
||||| || | | ||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 363 ttccccgtgagcagacagatggcaggcaaggtacagtaagccaagagaggaatggatgtc 304
Query: 1321 caaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccgccacca 1380
|| || || || || ||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 303 catgggtatacaatagagttgatgtaagaaaacctttccaaaaattttaggccgccacca 244
Query: 1381 tacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaagagcccac 1440
|| || |||||||| ||||| || ||||||||||| || |||| ||| |||||||||||
Sbjct: 243 tatccgtaccaaagtgggcagtgcttgctgaagaaaatttcaacagatccaagagcccaa 184
Query: 1441 cgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgcaacc 1500
||||| ||||||||||| || || ||||||||||||||||||||||||||||||||| |
Sbjct: 183 cgaaggacctggtgaagccggtcagaaagattcagaggtgcagaacctttgaatgcaggc 124
Query: 1501 cgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaaccagttaga 1560
|| || || ||||||||||| |||||||||||||| || |||||||| || ||||| |
Sbjct: 123 cgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatcttaaatccagtcaag 64
Query: 1561 atatcttctgtaactgatccatagatccagccaatctcttttccccagtctgtcttgtct 1620
||||| ||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 63 atatcctctgtaattgatccataaatccagccaatctctttcccccagtcagtcttgtct 4
Query: 1621 tc 1622
||
Sbjct: 3 tc 2
>gb|BG052201.1|BG052201 RHIZ2_7_D11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 468
Score = 452 bits (228), Expect = e-124
Identities = 351/392 (89%)
Strand = Plus / Minus
Query: 2407 ctttggccaaggaagacctgaatcattccaggatgatcacgaacattgtttccaggccag 2466
|||||||||||||| ||||||||||||||||||||||| || || |||||||||||||||
Sbjct: 402 ctttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccag 343
Query: 2467 ggggttccatcttgcattgtccatccttcttcaggaactttctgggctttggcaactaag 2526
|| ||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||
Sbjct: 342 aggcttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaag 283
Query: 2527 gcattgattctcaccttgaattcctcatactctctcttcattgctctcctctccctaaca 2586
|| ||||| || |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 282 gcgttgatccttaccttgaattcctcgtattctctcttcattgccctcctctccctaaca 223
Query: 2587 aagtttgctgccaccttgtctttcaagtagtctatcttctgttggaagtaccactctgga 2646
|| || || ||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 222 aatgaagcggcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcagga 163
Query: 2647 gcgcgaggttcaatattgtaccgtttgcagaaaggaacccatttctttgcaaattcagat 2706
|| ||||| |||| ||| || ||||||||||||||||||||| |||||||||||||||
Sbjct: 162 gcacgaggctcaagattaaactttttgcagaaaggaacccatttttttgcaaattcagat 103
Query: 2707 gtttcagataatgcttcaaacgttagcattgcagcaccatcatcagaaacatagcaagaa 2766
|||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 102 gtttcagacaacgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggag 43
Query: 2767 accttatcaacaggataatccaccgaaaggat 2798
||||| ||||| ||||||||||| ||||||||
Sbjct: 42 accttctcaaccggataatccacggaaaggat 11
>gb|BM326022.1|BM326022 PIC1_64_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 363
Score = 422 bits (213), Expect = e-115
Identities = 318/353 (90%)
Strand = Plus / Minus
Query: 1459 cgatctgaaagattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaa 1518
||||| |||||||| |||||||||||||||| || || ||||||||||||||||||||
Sbjct: 361 cgatcggaaagattgagaggtgcagaaccttgcaaagcggcccgtttaggtatgcagtaa 302
Query: 1519 attgaccgccaaccatgacaatgcatcttgaaaccagttagaatatcttctgtaactgat 1578
||||||||||||||||| || |||||||| || ||||| |||||||||||||||||||||
Sbjct: 301 attgaccgccaaccatggcagtgcatcttaaacccagtaagaatatcttctgtaactgat 242
Query: 1579 ccatagatccagccaatctcttttccccagtctgtcttgtcttcataaccacaactaatg 1638
||||| ||||| ||||| ||||||||||| ||||||||||||||||| || ||||| |||
Sbjct: 241 ccataaatccaaccaatatcttttccccaatctgtcttgtcttcatagccgcaactgatg 182
Query: 1639 acatgtatagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccattc 1698
|||||||||||||| |||| ||||||||| ||||| |||||||||| |||||||||||||
Sbjct: 181 acatgtatagcttccttcagaagagaagctggactggcactcttcagggttccaccattc 122
Query: 1699 tcgagaagtgtggatgtaaccaaaacagaagattggccaaatttcttttctaatttttgt 1758
|| ||||||||||||| ||| ||||| ||||| ||||||||||||||||| || ||||||
Sbjct: 121 tcaagaagtgtggatgcaacaaaaactgaagactggccaaatttcttttccaacttttgt 62
Query: 1759 tgatttacaataccggccttttcattctcagctcctggagcagcttcgtcaat 1811
||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 61 tgatttacaatactagccttttcattttcagctcctggagcagcttcatcaat 9
>gb|BE919029.1|BE919029 FM1_3_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 643
Score = 418 bits (211), Expect = e-114
Identities = 379/426 (88%), Gaps = 22/426 (5%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 419 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 360
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 359 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 300
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 299 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 243
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 242 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 184
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 183 --tctcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-gg 127
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---ct 619
||||||||||||| |||| || |||||||||||||||||| | ||| ||| ||
Sbjct: 126 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 67
Query: 620 tcaagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 66 tcaagcatatgctgattgggggagctgatgtgctgacatcctanttgcaatccaaaccac 7
Query: 680 actcct 685
||||||
Sbjct: 6 actcct 1
Score = 188 bits (95), Expect = 3e-045
Identities = 194/222 (87%), Gaps = 10/222 (4%)
Strand = Plus / Minus
Query: 62 atcgttccatacgcatataccacggcattacattttctgtatct--cacattcattcttt 119
||||||| ||| |||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 638 atcgttctataaccatatagcacggcattacattttctgtatctatcacattcaaccttt 579
Query: 120 ctacgaaaatttcacaaaaccaactcagatgattacagtacacaacaaaaaacaggcgca 179
||| ||||||||| |||||||||||| | ||||||||||||| ||||||||||| |||
Sbjct: 578 ctatgaaaatttcccaaaaccaactccaacgattacagtacacgacaaaaaacagacgcc 519
Query: 180 tttacatactttaattaactatagattaatgctaatattctgttttttctagtatagacg 239
|||||||| ||||| ||||||||||| |||||| ||| | |||||||||||||||
Sbjct: 518 tttacata---aaatta--tatagattaatactaata--ctg-tctttctagtatagacg 467
Query: 240 aacatgtaatgaacaagccctccaatgaacaggcatacataa 281
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 466 aacatgtaatgaacaagccctccaatgagcaggcatacataa 425
>gb|CX617979.1|CX617979 GABR1_37_B05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_B05_A002 3', mRNA sequence
Length = 606
Score = 410 bits (207), Expect = e-112
Identities = 403/459 (87%), Gaps = 22/459 (4%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 452 tacataaatactgggcaggttgctctgttccactggcaaatgcacattcctgcctgcctt 393
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 392 attgaaaaccaagtttgtacacgggagcagtgcaaaatcaaaacaccttactgttcggct 333
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 332 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 276
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 275 gctgtattccacggcccaactgcacaagcattgccgcagcctccattctcccc-agtata 217
Query: 513 tctctcagatattaagt--aggttcacca-tggatcaaaagaaacttgggacatttcatg 569
||| || |||||| || |||||| || ||||||||||||||| |||||||| |
Sbjct: 216 tct--caaatattaggttgaggttcccccctggatcaaaagaaacacaagacatttcg-g 160
Query: 570 tctcttatctacaga-----cactg--aatatggggacaaacaccagaaaatatacttc- 621
||||||||||||||| || || |||||||||||||||||| | ||| |||||||
Sbjct: 159 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 100
Query: 622 --aagcatatgcagattgggggagctgatgcactgacatcctagttgcaatccaaaccac 679
|||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 99 tcaagcatatgctgattgggggagctgatgtgctgacatcctaattgcaatccaaaccac 40
Query: 680 actcctcaagaagcggaccatcatccttcgcaaggaaag 718
||||||||||||| |||||||||||||| ||||||||||
Sbjct: 39 actcctcaagaagtggaccatcatcctttgcaaggaaag 1
Score = 113 bits (57), Expect = 1e-022
Identities = 135/157 (85%), Gaps = 8/157 (5%)
Strand = Plus / Minus
Query: 125 aaaatttcacaaaaccaactcagatgattacagtacacaacaaaaaacaggcgcatttac 184
|||||||| |||||||||||| | ||||||||||||| ||||||||||| ||| || |
Sbjct: 606 aaaatttcccaaaaccaactccaacgattacagtacacgacaaaaaacagacgccctttc 547
Query: 185 atactttaattaactatagattaatgctaatattctgttttttctagtatagacgaacat 244
||| ||||| ||||||||||| |||||| |||| ||| |||||||||||||||||
Sbjct: 546 ataa---aatta--tatagattaatactaata--ctgtcttt-ctagtatagacgaacat 495
Query: 245 gtaatgaacaagccctccaatgaacaggcatacataa 281
||||||||||||||||||||||| |||| ||||||||
Sbjct: 494 gtaatgaacaagccctccaatgagcagggatacataa 458
>gb|CW140470.1|CW140470 104_531_11135797_116_34926_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135797, DNA
sequence
Length = 540
Score = 389 bits (196), Expect = e-105
Identities = 235/248 (94%)
Strand = Plus / Minus
Query: 1245 ctctggagtgataaatttccctgtcaataaacagatggcaggcaatgtacagtaagccaa 1304
|||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 248 ctctggagtgataaattttcccgtcaataaacaaatggcaggcaatgtacagtaagccaa 189
Query: 1305 gaggggaatagatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaa 1364
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||
Sbjct: 188 aaggggaatagatgtccaaggatacacaatgtagttgatgtaggaaaatctttccagaaa 129
Query: 1365 tttcagaccgccaccatacccataccaaagagggcaatgattgctgaagaagatctcaat 1424
|||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 128 tttcaggccaccgccatacccataccaaagagggcaatgattgctgaagaagatttcaat 69
Query: 1425 agacccaagagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcaga 1484
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 68 agacccaagagcccaacgaagcacctggtgaagacgatctgaatgattcagaggtgcaga 9
Query: 1485 acctttga 1492
||||||||
Sbjct: 8 acctttga 1
Score = 299 bits (151), Expect = 1e-078
Identities = 196/211 (92%)
Strand = Plus / Minus
Query: 1033 gtcacggtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagca 1092
||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 540 gtcacagtgaagcttgtatcaactcctgctatgaccttgagaagtccttggaacacagca 481
Query: 1093 aagaggtgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatca 1152
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 480 aagaggtgcgaggacacacctccaatgacccagaactgctcattcctccaccaatcatca 421
Query: 1153 attccaacaccactccatctcatttctaggatgctcgtagcaaaaatgcagataaaaagt 1212
|||||||||||| ||||| |||||| ||| ||||| |||||||||||||| ||||| |||
Sbjct: 420 attccaacaccagtccatgtcatttgtagtatgcttgtagcaaaaatgcaaataaagagt 361
Query: 1213 gacatgaaccacaggctggcaacattattca 1243
||||||||||||| ||||| |||||||||||
Sbjct: 360 gacatgaaccacatgctggtaacattattca 330
>gb|BI099615.1|BI099615 IP1_44_E03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 379 bits (191), Expect = e-102
Identities = 357/403 (88%), Gaps = 22/403 (5%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 396 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 337
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 336 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 277
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 276 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 220
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 219 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 161
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 160 --tctcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-gg 104
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---ct 619
||||||||||||| |||| || |||||||||||||||||| | ||| ||| ||
Sbjct: 103 tctcttatctacagaggggacattgtaaatatggggacaaacaccggcaaaaatacttct 44
Query: 620 tcaagcatatgcagattgggggagctgatgcactgacatccta 662
|||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 43 tcaagcatatgctgattgggggagctgatgtgctgacatccta 1
Score = 105 bits (53), Expect = 3e-020
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 225 tttctagtatagacgaacatgtaatgaacaagccctccaatgaacaggcatacataa 281
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 458 tttctagtatagacgaacatgtaatgaacaagccctccaatgagcaggcatacataa 402
>gb|BF481250.1|BF481250 FM1_17_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 412
Score = 377 bits (190), Expect = e-102
Identities = 343/394 (87%)
Strand = Plus / Minus
Query: 652 ctgacatcctagttgcaatccaaaccacactcctcaagaagcggaccatcatccttcgca 711
||||| |||||||||||||||||||| || ||||| | || ||||||||||||||||||
Sbjct: 401 ctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatccttcgca 342
Query: 712 aggaaaggatcaatccgaacccaaaggagcgagaagattgaagccagcagaatggaccag 771
||||||||||| ||||| ||||| || ||||||||||||||||||| || |||||||||
Sbjct: 341 aggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatggaccag 282
Query: 772 acgatgacaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataa 831
|| |||||||| ||||| || ||||| ||||| ||||||| ||| ||||| || || |||
Sbjct: 281 acaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaatgggtaa 222
Query: 832 agatggacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactca 891
||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 221 agatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggcccccatgattca 162
Query: 892 tatccgttattgatcgcatttgaaacgccagcgaccacaccaatgaagttcaatagaagc 951
||||| || ||||| ||||| ||||||||||| || || |||||||| |||| |||||||
Sbjct: 161 tatccattgttgattgcattggaaacgccagctactactccaatgaaattcagtagaagc 102
Query: 952 aaggtggtaggaggtatcaataaggtagtccatttgaatgtatatagctctgagaactcc 1011
| |||||| |||||||||| | ||| |||||||||||||| || |||||||||||||||
Sbjct: 101 agggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctgagaactcc 42
Query: 1012 tcatcatctccaccctttgatgtcacggtgaagc 1045
|| || ||||||||||| |||||||| |||||||
Sbjct: 41 tcgtcgtctccacccttggatgtcacagtgaagc 8
>gb|CL172542.1|CL172542 104_375_10890237_116_31797_141 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890237, DNA
sequence
Length = 578
Score = 369 bits (186), Expect = 1e-099
Identities = 207/214 (96%)
Strand = Plus / Plus
Query: 2085 atcaaaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatct 2144
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaaaaaagacaacattcctgttagcatatcggtcatggcgatcaatcccatcaaatct 380
Query: 2145 ttgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacat 2204
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagggaactgtacataacaaaccttctttcctagtaaagggtccatcataaaacacat 440
Query: 2205 tgcttcctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaata 2264
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 441 tgcttccattatagccttgctgttgttgatgtactgatcacaatccaagtttaacaaaga 500
Query: 2265 tggagcatttgttagtacagcagagactcggacc 2298
||||||| |||||||||||| |||||||||||||
Sbjct: 501 tggagcacttgttagtacaggagagactcggacc 534
Score = 361 bits (182), Expect = 3e-097
Identities = 209/218 (95%)
Strand = Plus / Plus
Query: 1867 tttttcttctctgttttgggtttggtagtcttcttcttttgcttcctattgccaaagcag 1926
||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1 tttttcttctccgtttttggtttggtagtcttcttcttgtgcttcctattaccaaagcag 60
Query: 1927 caacagcaaaagcaccacttgggccagcagttgcaagtccttgatggtggcttctttgtt 1986
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacagcaaaagcaccacttcggacagcagttgcaagtccttgatggtggcttctttgtt 120
Query: 1987 ttgggggcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataa 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 ttgggggcatcataaccatataatgcctgccttctaaatacacatccagtaccgacataa 180
Query: 2047 attggaccctgaataccatccaaacctttcatgttgat 2084
|| ||||||||||||||||||||||||||||| |||||
Sbjct: 181 atcggaccctgaataccatccaaacctttcatattgat 218
>gb|BF421657.1|BF421657 FM1_10_G10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 597
Score = 369 bits (186), Expect = 1e-099
Identities = 346/390 (88%), Gaps = 22/390 (5%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 390 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 331
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 330 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 271
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 270 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 214
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 213 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 155
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 154 --tctcagatattaggttgaggttccaccatggatcaaaagaaacgcaagacatttc-gg 98
Query: 570 tctcttatctaca-----gacactg--aatatggggacaaacaccagaaaatata---ct 619
||||||||||||| |||| || |||||||||||||||||| | ||| ||| ||
Sbjct: 97 tctcttatctacagaggcgacattgtaaatatggggacaaacaccggcaaaaatacttct 38
Query: 620 tcaagcatatgcagattgggggagctgatg 649
|||||||||||| |||||||||||||||||
Sbjct: 37 tcaagcatatgctgattgggggagctgatg 8
Score = 218 bits (110), Expect = 3e-054
Identities = 186/207 (89%), Gaps = 7/207 (3%)
Strand = Plus / Minus
Query: 77 tataccacggcattacattttctgtatct--cacattcattctttctacgaaaatttcac 134
|||| |||||||||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 597 tatagcacggcattacattttctgtatctatcacattcaacctttctatgaaaatttcac 538
Query: 135 aaaaccaactcagatgattacagtacacaacaaaaaacaggcgcatttacatactttaat 194
||||||||||| | ||||||||||||| ||||||||||| ||| ||||||||| |||||
Sbjct: 537 aaaaccaactccaacgattacagtacacgacaaaaaacagacgcctttacataccttaat 478
Query: 195 taactatagattaatgctaatattctgttttttctagtatagacgaacatgtaatgaaca 254
|| ||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||
Sbjct: 477 ta--tatagattaatactaata--ctgtcttt-ctagtatagacgaacatgtaatgaaca 423
Query: 255 agccctccaatgaacaggcatacataa 281
||||||||||||| |||||||||||||
Sbjct: 422 agccctccaatgagcaggcatacataa 396
>gb|BG050984.1|BG050984 FM1_55_A02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 362
Score = 367 bits (185), Expect = 5e-099
Identities = 311/353 (88%)
Strand = Plus / Minus
Query: 813 acctttgagaaagggataaagatggacaatcacccaaaatgcaaagaatagcttcccaaa 872
||||||||| || || |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 361 acctttgaggaatgggtaaagatggacaatcacccaaaatgcaaagaagagcttcccgaa 302
Query: 873 gagggggccccatgactcatatccgttattgatcgcatttgaaacgccagcgaccacacc 932
||||| |||||||| |||||||| || ||||| ||||| ||||||||||| || || ||
Sbjct: 301 caggggcccccatgattcatatccattgttgattgcattggaaacgccagctactactcc 242
Query: 933 aatgaagttcaatagaagcaaggtggtaggaggtatcaataaggtagtccatttgaatgt 992
|||||| |||| |||||||| |||||| |||||||||| | ||| ||||||||||||||
Sbjct: 241 aatgaaattcagtagaagcagggtggtcggaggtatcagaagggttgtccatttgaatgt 182
Query: 993 atatagctctgagaactcctcatcatctccaccctttgatgtcacggtgaagcttgtatc 1052
|| ||||||||||||||||| || ||||||||||| |||||||| |||||||| || ||
Sbjct: 181 gtacagctctgagaactcctcgtcgtctccacccttggatgtcacagtgaagctcgtgtc 122
Query: 1053 aacaccagctatgaccttgagaagtccctggaacacagcaaagaggtgtgaggacacacc 1112
|||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 121 tacaccagctatgaccttgaggagtccttggaacacagcaaagagatgtgaagacacacc 62
Query: 1113 tccaatgacccagaactgctcattcctccaccagtcatcaattccaacaccac 1165
|||||||||||| ||||||||||| |||||||| ||||| || || |||||||
Sbjct: 61 tccaatgacccaaaactgctcatttctccaccaatcatcgatgcctacaccac 9
>gb|CD424650.1|CD424650 SA1_8_F02.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_8_F02_A002 5', mRNA sequence
Length = 555
Score = 367 bits (185), Expect = 5e-099
Identities = 395/463 (85%), Gaps = 4/463 (0%)
Strand = Plus / Minus
Query: 3292 ccatatgcagcaagatccttggatgggtccatagacctgggttgcacaggtaagctggga 3351
|||||||| || ||||||||||| |||||||||||||| ||||||||||| | | |||||
Sbjct: 552 ccatatgcggcgagatccttggaagggtccatagaccttggttgcacaggaaggttggga 493
Query: 3352 tccgcataaggaaggggatgtatcctctttcc-cccaccacccatgaaagaaggcaccag 3410
||||| || ||||| || || |||||||| || ||||||||||||||| || ||||| ||
Sbjct: 492 tccgcgtacggaagagggtgaatcctcttcccacccaccacccatgaacgagggcacaag 433
Query: 3411 cgcgtgctgctccggtgggatgtcatccaccatttgcccgttggtgaggagtggaacatt 3470
|||||||||||||| || |||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 432 tgcgtgctgctccggcggaatgtcatcgaccatctgtccgttggtgaggagaggaacatt 373
Query: 3471 ggggttgagctggaaagcttgtggcgcgccattagggtcacctccacggccgtagctcat 3530
||| || ||||||| | ||| ||| |||| | |||| | || ||||||||||||||
Sbjct: 372 agggatgggctggaatggttgcggcacgccgtcgaggtcggcgccgcggccgtagctcat 313
Query: 3531 gtggccgtagagcatggactcggccacagactgcgagtcatggccgtc---ccagttgaa 3587
|||| ||| ||||||||||||||| || |||| ||||| || ||| |||||||||
Sbjct: 312 gtgggcgtggagcatggactcggcgacgtactgggagtcgtgcttgtcgctccagttgaa 253
Query: 3588 ctcgttgtccaggtcatcgacgccgtcctcctcctcgtcaccggtcacacgttggcagcc 3647
|||||| |||||||| ||||||||||||||||||||||| |||| ||| || ||| ||
Sbjct: 252 ctcgttctccaggtcgtcgacgccgtcctcctcctcgtccccgggcacgcgcgcgcaccc 193
Query: 3648 cttgaggcgcttgtatcgagtcttgcactgggggcagttctgcgtgccctcccggcgctc 3707
||||||||||||| | || |||||||||||||||||||||||||||||||| || |||||
Sbjct: 192 cttgaggcgcttgaagcgggtcttgcactgggggcagttctgcgtgccctcgcgtcgctc 133
Query: 3708 gtattcgtagcagtcccggcagacggggaaggcgcactcgttg 3750
||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 132 gtactcgtagcagtcccggcagatggggaaggcgcactcgttg 90
>gb|CN132882.1|CN132882 OX1_8_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_8_F12_A002 5', mRNA sequence
Length = 704
Score = 367 bits (185), Expect = 5e-099
Identities = 563/689 (81%)
Strand = Plus / Minus
Query: 799 tgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaaaatgcaaag 858
|||| ||| |||| ||| ||||| || || || ||||||| |||||||| || || |||
Sbjct: 696 tgccgtcccaccagacccttgaggaacgggtacagatggatgatcacccagaacgcgaag 637
Query: 859 aatagcttcccaaagagggggccccatgactcatatccgttattgatcgcatttgaaacg 918
|| |||||||| ||||| || ||||||||||| || ||||| |||||||| || || |
Sbjct: 636 aagagcttcccgaagagaggaccccatgactcgtacccgttgttgatcgcgttcgagatt 577
Query: 919 ccagcgaccacaccaatgaagttcaatagaagcaaggtggtaggaggtatcaataaggta 978
||||| || || || |||||||||| || || | ||||| ||||| ||||| | |||
Sbjct: 576 ccagccacgaccccgatgaagttcagcaggagaagcgtggttggagggatcaacagggtg 517
Query: 979 gtccatttgaatgtatatagctctgagaactcctcatcatctccaccctttgatgtcacg 1038
||||||||||| || || ||||||||||||||||| || || || |||||||||| |||
Sbjct: 516 gtccatttgaacgtgtacagctctgagaactcctcgtcgtccccggcctttgatgtgacg 457
Query: 1039 gtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagcaaagagg 1098
|||||||| || || | ||| || | |||||||||||| || |||||||| | |||||
Sbjct: 456 gtgaagctcgtgtcgataccggcgaggaccttgagaaggccttggaacaccgtgaagaga 397
Query: 1099 tgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatcaattcca 1158
|||| ||| |||||||||||||||||||||||||| || || | | |||| || |
Sbjct: 396 tgtgcggaaacacctccaatgacccagaactgctcgtttctgcggcggtcaaaaaaaacc 337
Query: 1159 acaccactccatctcatttctaggatgctcgtagcaaaaatgcagataaaaagtgacatg 1218
|||||||||||||||||||| ||||||| || || ||||||||| ||||||| ||||
Sbjct: 336 acaccactccatctcatttcaaggatgccggtgacagcaatgcagatgaaaagtgccatg 277
Query: 1219 aaccacaggctggcaacattattcagctctggagtgataaatttccctgtcaataaacag 1278
||||| | || || ||||| | |||||||| |||||||||||||| || | | ||||
Sbjct: 276 aaccagatactagcgacattggtaagctctggtgtgataaatttccccgtgagcagacag 217
Query: 1279 atggcaggcaatgtacagtaagccaagaggggaatagatgtccaaggatacacgatggag 1338
||||||||||| ||||||||||||||||| ||||| |||||||| || || || || |||
Sbjct: 216 atggcaggcaaggtacagtaagccaagagaggaatggatgtccatgggtatacaatagag 157
Query: 1339 ttgatgtaggaaaatctttccaaaaatttcagaccgccaccatacccataccaaagaggg 1398
|||||||| ||||| |||||||||||||| || ||||||||||| || |||||||| |||
Sbjct: 156 ttgatgtaagaaaacctttccaaaaattttaggccgccaccatatccgtaccaaagtggg 97
Query: 1399 caatgattgctgaagaagatctcaatagacccaagagcccaccgaagcacctggtgaaga 1458
|| || |||||||||| || |||| ||| ||||||||||| ||||| |||||||||||
Sbjct: 96 cagtgcatgctgaagaaaatttcaacagatccaagagcccaacgaaggacctggtgaagc 37
Query: 1459 cgatctgaaagattcagaggtgcagaacc 1487
|| || |||||||||||||||||||||||
Sbjct: 36 cggtcagaaagattcagaggtgcagaacc 8
>gb|CW344900.1|CW344900 104_847_11488203_116_36201_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488203, DNA
sequence
Length = 540
Score = 361 bits (182), Expect = 3e-097
Identities = 194/198 (97%)
Strand = Plus / Plus
Query: 3646 cccttgaggcgcttgtatcgagtcttgcactgggggcagttctgcgtgccctcccggcgc 3705
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cccttgaggcgcttgtatcgggtcttgcactgggggcagttctgcgtgccctcccggcgc 217
Query: 3706 tcgtattcgtagcagtcccggcagacggggaaggcgcactcgttgcacgccacgaagggg 3765
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcgtactcgtagcagtcccggcagacggggaaggcgcactcgttgcacgccacgaagggc 277
Query: 3766 tccccgccgggggcaaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgc 3825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tccccgccgggggcaaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgc 337
Query: 3826 tcccgcggcggcttcggc 3843
|||||| |||||||||||
Sbjct: 338 tcccgcagcggcttcggc 355
Score = 159 bits (80), Expect = 2e-036
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 3843 cccgggatcgccgtcgcggcggatgacgacgagctcgttgcggttgtgggagccggccac 3902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cccgggatcgccgtcgcggcggatgacgacgagctcgttgcggttgtgggagccggccac 520
Query: 3903 cagcccggcgctcgcctcca 3922
||||||||||||||||||||
Sbjct: 521 cagcccggcgctcgcctcca 540
>gb|BE356017.1|BE356017 DG1_121_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 359 bits (181), Expect = 1e-096
Identities = 370/433 (85%)
Strand = Plus / Minus
Query: 1429 ccaagagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacct 1488
||||||||||| ||||| | |||| ||| || || ||||||||||||||||||||||||
Sbjct: 465 ccaagagcccaacgaaggtcttggtcaagccggtcagaaagattcagaggtgcagaacct 406
Query: 1489 ttgaatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttg 1548
||||||||| |||| || || ||||||||||| |||||||||||||| || ||||||||
Sbjct: 405 ttgaatgcagcccgcttcgggatgcagtaaatagaccgccaaccatggcagtgcatctta 346
Query: 1549 aaaccagttagaatatcttctgtaactgatccatagatccagccaatctcttttccccag 1608
|| ||||| | ||||| ||||||| ||||||||| ||||||||||||||||| ||||||
Sbjct: 345 aatccagtcaagatatcctctgtaattgatccataaatccagccaatctctttcccccag 286
Query: 1609 tctgtcttgtcttcataaccacaactaatgacatgtatagcttctttcaaaagagaagca 1668
|| ||||||||||| || || || || || |||||||||||||| || | |||||||||
Sbjct: 285 tcagtcttgtcttcgtagccgcagctgattacatgtatagcttcctttagaagagaagct 226
Query: 1669 ggacttgcactcttcaaggttccaccattctcgagaagtgtggatgtaaccaaaacagaa 1728
|||||||||||| ||| ||| ||||||||||| |||||||| |||| ||| ||||||||
Sbjct: 225 ggacttgcactcctcagggtcccaccattctcaagaagtgttgatgcaacaaaaacagat 166
Query: 1729 gattggccaaatttcttttctaatttttgttgatttacaataccggccttttcattctca 1788
|| || |||||||||||||||| ||| |||||||||||||| || ||||| ||| |||
Sbjct: 165 gactgcccaaatttcttttctagtttctgttgatttacaattccagccttctcaacgtca 106
Query: 1789 gctcctggagcagcttcgtcaatttcaccaagagcatatgcaggggattggttctcttct 1848
|| ||||||||| |||| ||||||||||| | |||||||||||| || |||| ||| ||
Sbjct: 105 gcacctggagcaccttcctcaatttcacccaaagcatatgcaggagaagggttttctgct 46
Query: 1849 ttcttgaaaaata 1861
|||||||||||||
Sbjct: 45 ttcttgaaaaata 33
>gb|BG560234.1|BG560234 RHIZ2_71_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 359 bits (181), Expect = 1e-096
Identities = 373/437 (85%)
Strand = Plus / Minus
Query: 1465 gaaagattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattgac 1524
||||||||||||||||||||||||||||||||| ||| || || ||||||||||| |||
Sbjct: 449 gaaagattcagaggtgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagac 390
Query: 1525 cgccaaccatgacaatgcatcttgaaaccagttagaatatcttctgtaactgatccatag 1584
||||||||||| || |||||||| || ||||| | ||||| ||||||| |||||||||
Sbjct: 389 cgccaaccatggcagtgcatcttaaatccagtcaagatatcctctgtaattgatccataa 330
Query: 1585 atccagccaatctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgt 1644
||||||||||||||||| |||||||| ||||||||||| || || || || || ||||||
Sbjct: 329 atccagccaatctctttcccccagtcagtcttgtcttcgtagccgcagctgattacatgt 270
Query: 1645 atagcttctttcaaaagagaagcaggacttgcactcttcaaggttccaccattctcgaga 1704
|||||||| || | ||||||||| |||||||||||| ||| ||| ||||||||||| |||
Sbjct: 269 atagcttcctttagaagagaagctggacttgcactcctcagggtcccaccattctcaaga 210
Query: 1705 agtgtggatgtaaccaaaacagaagattggccaaatttcttttctaatttttgttgattt 1764
||||| |||| ||| |||||||| || || |||||||||||||||| ||| |||||| ||
Sbjct: 209 agtgttgatgcaacaaaaacagatgactgcccaaatttcttttctagtttctgttgactt 150
Query: 1765 acaataccggccttttcattctcagctcctggagcagcttcgtcaatttcaccaagagca 1824
||||| || ||||| ||| ||||| ||||||||| |||| ||||||||||| | ||||
Sbjct: 149 acaattccagccttctcaacgtcagcacctggagcaccttcctcaatttcacccaaagca 90
Query: 1825 tatgcaggggattggttctcttctttcttgaaaaataataactttttcttctctgttttg 1884
|||||||| || |||| ||| ||||||||||||||||| || ||||||||||| ||
Sbjct: 89 tatgcaggagaagggttttctgctttcttgaaaaataatcttttcttcttctctgtcttt 30
Query: 1885 ggtttggtagtcttctt 1901
||||| |||||||||||
Sbjct: 29 ggttttgtagtcttctt 13
>gb|BI140990.1|BI140990 IP1_41_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 359 bits (181), Expect = 1e-096
Identities = 328/377 (87%)
Strand = Plus / Minus
Query: 652 ctgacatcctagttgcaatccaaaccacactcctcaagaagcggaccatcatccttcgca 711
||||| |||||||||||||||||||| || ||||| | || ||||||||||||||||||
Sbjct: 389 ctgacctcctagttgcaatccaaaccgcattcctccaacaggggaccatcatccttcgca 330
Query: 712 aggaaaggatcaatccgaacccaaaggagcgagaagattgaagccagcagaatggaccag 771
||||||||||| ||||| ||||| || ||||||||||||||||||| || |||||||||
Sbjct: 329 aggaaaggatctatccggacccagagcagcgagaagattgaagccaagaggatggaccag 270
Query: 772 acgatgacaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataa 831
|| |||||||| ||||| || ||||| ||||| ||||||| ||| ||||| || || |||
Sbjct: 269 acaatgacaattgttggcgttctgttctgcctcccaaccagacccttgaggaatgggtaa 210
Query: 832 agatggacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactca 891
||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 209 agatggacaatcacccaaaatgcaaagaagagcttcccgaacaggggcccccatgattca 150
Query: 892 tatccgttattgatcgcatttgaaacgccagcgaccacaccaatgaagttcaatagaagc 951
||||| || ||||| ||||| ||||||||||| || || |||||||| |||| |||||||
Sbjct: 149 tatccattgttgattgcattggaaacgccagctactactccaatgaaattcagtagaagc 90
Query: 952 aaggtggtaggaggtatcaataaggtagtccatttgaatgtatatagctctgagaactcc 1011
| |||||| |||||||||| | ||| |||||||||||||| || |||||||||||||||
Sbjct: 89 agggtggtcggaggtatcagaagggttgtccatttgaatgtgtacagctctgagaactcc 30
Query: 1012 tcatcatctccaccctt 1028
|| || |||||||||||
Sbjct: 29 tcgtcgtctccaccctt 13
>gb|CW319521.1|CW319521 104_812_11474531_116_35888_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474531, DNA
sequence
Length = 671
Score = 349 bits (176), Expect = 1e-093
Identities = 286/315 (90%), Gaps = 12/315 (3%)
Strand = Plus / Plus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 304 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 363
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 364 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 423
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 424 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 480
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 481 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 539
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 540 --tctcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-gg 596
Query: 570 tctcttatctacaga 584
|||||||||||||||
Sbjct: 597 tctcttatctacaga 611
Score = 194 bits (98), Expect = 4e-047
Identities = 220/255 (86%), Gaps = 13/255 (5%)
Strand = Plus / Plus
Query: 29 aatacactattatggaaccataaaagatactacatcgttccatacgcatataccacggca 88
||||||||| || ||||||||||||||| ||||||| ||| |||||| |||||||
Sbjct: 55 aatacactagcatagaaccataaaagatat---atcgttctataaccatatagcacggca 111
Query: 89 ttacattttctgtatct--cacattcattctttctacgaaaatttcacaaaaccaactca 146
||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 112 ttacattttctgtatctatcacattcaacctttctatgaaaatttcccaaaaccaactcc 171
Query: 147 gatgattacagtacacaacaaaaaacaggcgcatttacatactttaattaactatagatt 206
| ||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||
Sbjct: 172 aacgattacagtacacgacaaaaaacagacgcctttacata---aaatta--tatagatt 226
Query: 207 aatgctaatattctgttttttctagtatagacgaacatgtaatgaacaagccctccaatg 266
||| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aatactaata--ctg-tctttctagtatagacgaacatgtaatgaacaagccctccaatg 283
Query: 267 aacaggcatacataa 281
| |||||||||||||
Sbjct: 284 agcaggcatacataa 298
>gb|BF655662.1|BF655662 FM1_47_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 419
Score = 349 bits (176), Expect = 1e-093
Identities = 331/383 (86%)
Strand = Plus / Minus
Query: 2563 ttcattgctctcctctccctaacaaagtttgctgccaccttgtctttcaagtagtctatc 2622
|||||||| ||||| ||||||||||| || || ||||||||||||| ||||| ||||
Sbjct: 402 ttcattgccctcctttccctaacaaatgaagcggcaaccttgtctttcaggtagtgtatc 343
Query: 2623 ttctgttggaagtaccactctggagcgcgaggttcaatattgtaccgtttgcagaaagga 2682
|| ||||||||||||||||| | ||| ||||| |||| ||| || |||||||||||||
Sbjct: 342 ttntgttggaagtaccactcagtagcacgaggctcaagattaaactttttgcagaaagga 283
Query: 2683 acccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagcattgcagca 2742
|||||||| ||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 282 acccatttttttgcaaattcagatgtttcagacaacgcttcaaaggtaagcattgcagca 223
Query: 2743 ccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgaaaggatagat 2802
|||||||||||||||||||| || |||||| ||| ||||||||||| |||||||| ||
Sbjct: 222 ccatcatcagaaacatagcaggagaccttagtaaccggataatccacggaaaggatggaa 163
Query: 2803 agaacagtatttgttgtgaccaaaggaggttcctttaagggatcaaccgtactgacaaag 2862
|| ||||| || | ||||||||| |||||||||||| |||||||||||||| ||||||||
Sbjct: 162 aggacagtgttcgctgtgaccaagggaggttcctttgagggatcaaccgtaatgacaaag 103
Query: 2863 aaatcaattggagcaagttgagatggctggccttccttgtcgaacctcagtgacagccgg 2922
|| ||||| |||||||| ||||| || || ||||||||||| ||||| ||||||| |||
Sbjct: 102 aagtcaatcggagcaagctgagagggttgaccttccttgtcaaaccttagtgacaaacgg 43
Query: 2923 tctaggtaagtctctctctcaat 2945
|| |||||||||||||| |||||
Sbjct: 42 tccaggtaagtctctctttcaat 20
>gb|CD425235.1|CD425235 SA1_11_F01.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_11_F01_A002 3', mRNA sequence
Length = 510
Score = 349 bits (176), Expect = 1e-093
Identities = 286/315 (90%), Gaps = 12/315 (3%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 368 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 309
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 308 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 249
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 248 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 192
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 191 gctgtattccacggcccaactgcacaagcattgccgcagcctccattct-ccccagtata 133
Query: 513 tctctcagatattaagt--aggtt-caccatggatcaaaagaaacttgggacatttcatg 569
|||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 132 --tctcagatattaggttgaggttccaccatggatcaaaagaaacacaagacatttc-gg 76
Query: 570 tctcttatctacaga 584
|||||||||||||||
Sbjct: 75 tctcttatctacaga 61
Score = 121 bits (61), Expect = 5e-025
Identities = 127/145 (87%), Gaps = 8/145 (5%)
Strand = Plus / Minus
Query: 137 aaccaactcagatgattacagtacacaacaaaaaacaggcgcatttacatactttaatta 196
||||||||| | ||||||||||||| ||||||||||| ||| |||||||| |||||
Sbjct: 510 aaccaactccaacgattacagtacacgacaaaaaacagacgcctttacataa---aatta 454
Query: 197 actatagattaatgctaatattctgttttttctagtatagacgaacatgtaatgaacaag 256
||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||
Sbjct: 453 --tatagattaatactaata--ctgtcttt-ctagtatagacgaacatgtaatgaacaag 399
Query: 257 ccctccaatgaacaggcatacataa 281
||||||||||| |||||||||||||
Sbjct: 398 ccctccaatgagcaggcatacataa 374
>gb|BG465808.1|BG465808 RHIZ2_48_H02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 477
Score = 343 bits (173), Expect = 8e-092
Identities = 385/453 (84%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 1993 gcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattgga 2052
|||||||||||||| | |||||||| ||| || |||||||||||||| ||||| || ||
Sbjct: 471 gcatcataaccatacagtgcctgccgtctgaaaacacatccagtacccacatagatgggt 412
Query: 2053 ccctgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagca 2112
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct: 411 ccttgaataccatccaaacctttcatgttgatatcaaaaaagacgacattcctgtttgcg 352
Query: 2113 tatcggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttc 2172
||||| ||||| || ||||| |||||||| || ||||||||||| |||||||| || |||
Sbjct: 351 tatcgatcatgacggtcaataccatcaaacctctgagggaactggacatagcacactttc 292
Query: 2173 tttcctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttg 2232
|| || | ||||| |||||||| |||||||| || || ||||| |||||||| ||||||
Sbjct: 291 ttccccaccaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttg 232
Query: 2233 atgtagtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagact 2292
||||||||||||||||||||||| || | || |||||||||| || |||||||||||
Sbjct: 231 atgtagtgatcacaatccaagttcaataggtacggagcatttgataagacagcagagaca 172
Query: 2293 cggaccaatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctct 2352
||||||| ||||||||| |||||||| ||||| ||||||||||| ||||| | || |||
Sbjct: 171 cggaccagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttct 112
Query: 2353 ctagaaacataaaccaatcgtggcagttcatttccct-cacagtcaaggcctccgctttg 2411
|| || |||||||| | || |||| |||||||| | |||| ||| | || || |||||
Sbjct: 111 ctcgagacataaacaaggcgaggcaactcatttccttccaca-tcacgaccaccactttg 53
Query: 2412 gccaaggaagacctgaatcattccaggatgatc 2444
||||||||| |||||||||||||||||||||||
Sbjct: 52 gccaaggaatacctgaatcattccaggatgatc 20
>gb|CW218309.1|CW218309 104_651_11196119_148_37457_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196119, DNA
sequence
Length = 500
Score = 341 bits (172), Expect = 3e-091
Identities = 184/188 (97%)
Strand = Plus / Plus
Query: 3656 gcttgtatcgagtcttgcactgggggcagttctgcgtgccctcccggcgctcgtattcgt 3715
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gcttgtatcgggtcttgcactgggggcagttctgcgtgccctcccggcgctcgtactcgt 60
Query: 3716 agcagtcccggcagacggggaaggcgcactcgttgcacgccacgaaggggtccccgccgg 3775
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 agcagtcccggcagacggggaaggcgcactcgttgcacgccacgaagggctccccgccgg 120
Query: 3776 gggcaaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgctcccgcggcg 3835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 gggcaaggccgacgtcgtcgccgcaaatctggcacacctgcccgttctgctcccgcagcg 180
Query: 3836 gcttcggc 3843
||||||||
Sbjct: 181 gcttcggc 188
Score = 212 bits (107), Expect = 2e-052
Identities = 188/211 (89%), Gaps = 8/211 (3%)
Strand = Plus / Plus
Query: 3843 cccgggatcgccgtcgcggcggatgacgacgagctcgttgcggttgtgggagccggccac 3902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cccgggatcgccgtcgcggcggatgacgacgagctcgttgcggttgtgggagccggccac 353
Query: 3903 cagcccggcgctcgcctccatcgcttcctcccctccacttccgccgccga---cgaaggc 3959
|||||||||||||||||||||||||||||||||||| | ||| ||||||| |||| |
Sbjct: 354 cagcccggcgctcgcctccatcgcttcctcccctcctcctcctccgccgaagacgaaacc 413
Query: 3960 agaggatactgaccg-tagctcctctcactctagcagcagatcctcatcccccgagtggt 4018
||||||||||||| ||||||| ||| ||||||||||||||| ||| |||||| |
Sbjct: 414 gcaggatactgaccggtagctccgctcgctctagcagcagatctccat---ccgagt-ga 469
Query: 4019 ttctcaccgaacgccgagccgcgccacgccg 4049
|||||||||| ||||| |||||||| |||||
Sbjct: 470 ttctcaccgagcgccgcgccgcgccgcgccg 500
>gb|BF421722.1|BF421722 FM1_10_G10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 217
Score = 341 bits (172), Expect = 3e-091
Identities = 205/216 (94%)
Strand = Plus / Minus
Query: 1623 ataaccacaactaatgacatgtatagcttctttcaaaagagaagcaggacttgcactctt 1682
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ataaccgcaactaatgacatgtatagcttctttcaaaagagaagcaggacttgcactctt 158
Query: 1683 caaggttccaccattctcgagaagtgtggatgtaaccaaaacagaagattggccaaattt 1742
||||||||||||||||||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 157 caaggttccaccattctcgagcagtgtggatgtaacaaagacagaagagtgaccaaattt 98
Query: 1743 cttttctaatttttgttgatttacaataccggccttttcattctcagctcctggagcagc 1802
|||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 97 cttttctaatttttgttgatttacaagaccagctttttcattctcagctcctggagcagc 38
Query: 1803 ttcgtcaatttcaccaagagcatatgcaggggattg 1838
||| ||||||| ||||||||||||||||||||||||
Sbjct: 37 ttcatcaatttgaccaagagcatatgcaggggattg 2
>gb|CD230894.1|CD230894 SS1_20_G01.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_20_G01_A012 3', mRNA sequence
Length = 489
Score = 339 bits (171), Expect = 1e-090
Identities = 260/285 (91%), Gaps = 11/285 (3%)
Strand = Plus / Minus
Query: 275 tacataaataatgtgcaggttgctctgttccactggcagatgca--ttcctgcctgcctt 332
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 305 tacataaatactgtgcaggttgctctgttccactggcagatgcacattcctgcctgcctt 246
Query: 333 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaataccttgctgttcggct 392
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 245 attgagaaccaagtttgtacacgggagcagtgcagaatcaaaacaccttactgttcggct 186
Query: 393 cagcccatctatattgcgaccaagtaataaagaatgctgcacaatcaaacacttgcatat 452
|| || ||| || ||| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 185 cacccgatcaattttgtgcccaagtaataaagaatgctgcacaatcaaacac---catat 129
Query: 453 gctgtattccacggcccaactgcacaaggattgccgcagcctccattttcccccagtata 512
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 128 gctgtattccacggcccaactgcacaagcattgccgcagcctccattctcccc-agtata 70
Query: 513 tctctcagatattaagtag---gttcaccatggatcaaaagaaac 554
|||| |||||||| || | || ||||||||||||||||||||
Sbjct: 69 tctc--agatattaggttgagggtccaccatggatcaaaagaaac 27
Score = 145 bits (73), Expect = 4e-032
Identities = 154/177 (87%), Gaps = 8/177 (4%)
Strand = Plus / Minus
Query: 105 tcacattcattctttctacgaaaatttcacaaaaccaactcagatgattacagtacacaa 164
||||||||| ||||||| ||||||||| |||||||||||| | ||||||||||||| |
Sbjct: 479 tcacattcaacctttctatgaaaatttcccaaaaccaactccaacgattacagtacacga 420
Query: 165 caaaaaacaggcgcatttacatactttaattaactatagattaatgctaatattctgttt 224
|||||||||| ||| |||||||| ||||| ||||||||||| |||||| ||| |
Sbjct: 419 caaaaaacagacgcctttacataa---aatta--tatagattaatactaata--ctggct 367
Query: 225 tttctagtatagacgaacatgtaatgaacaagccctccaatgaacaggcatacataa 281
|| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 366 tt-ctagtatagacgaacatgtaatgaacaagccctccaatgagcaggcatacataa 311
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,229,885
Number of Sequences: 832831
Number of extensions: 1229885
Number of successful extensions: 344989
Number of sequences better than 0.5: 256
Number of HSP's better than 0.5 without gapping: 253
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 344172
Number of HSP's gapped (non-prelim): 630
length of query: 4065
length of database: 491,359,669
effective HSP length: 21
effective length of query: 4044
effective length of database: 473,870,218
effective search space: 1916331161592
effective search space used: 1916331161592
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)