BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW564981.1|AW564981 LG1_313_D01.b1_A002 Light Grown 1 (L... 769 0.0
gb|AW924401.1|AW924401 WS1_69_D08.b1_A002 Water-stressed 1 ... 769 0.0
gb|BE363727.1|BE363727 WS1_69_D08.g2_A002 Water-stressed 1 ... 769 0.0
gb|BG048579.1|BG048579 OV1_14_D09.b1_A002 Ovary 1 (OV1) Sor... 761 0.0
gb|CD207838.1|CD207838 HS1_35_D06.b1_A012 Heat-shocked seed... 735 0.0
gb|BG048507.1|BG048507 OV1_14_D09.g2_A002 Ovary 1 (OV1) Sor... 672 0.0
gb|AW924449.1|AW924449 WS1_69_D08.g1_A002 Water-stressed 1 ... 545 e-153
gb|BE352900.1|BE352900 LG1_313_F01.g1_A002 Light Grown 1 (L... 533 e-150
gb|CF071464.1|CF071464 FE1_13_E02.g1_A002 Iron-deficient se... 466 e-129
gb|AW287207.2|AW287207 LG1_267_H05.b1_A002 Light Grown 1 (L... 458 e-127
gb|CD429909.1|CD429909 ETH1_16_F11.b1_A002 Ethylene-treated... 458 e-127
gb|CD429957.1|CD429957 ETH1_16_F11.g1_A002 Ethylene-treated... 458 e-127
gb|BG049369.1|BG049369 OV1_19_B02.g1_A002 Ovary 1 (OV1) Sor... 456 e-126
gb|BG240198.1|BG240198 OV1_19_B02.b1_A002 Ovary 1 (OV1) Sor... 414 e-114
gb|BG240200.1|BG240200 OV1_19_B04.b1_A002 Ovary 1 (OV1) Sor... 398 e-109
gb|BI141563.1|BI141563 IP1_54_A05.b1_A002 Immature pannicle... 355 3e-096
gb|BG049371.1|BG049371 OV1_19_B04.g1_A002 Ovary 1 (OV1) Sor... 349 2e-094
gb|AW284103.1|AW284103 LG1_267_H05.g1_A002 Light Grown 1 (L... 339 2e-091
gb|BQ655982.1|BQ655982 pRC0201 Sorghum halepense rhizome cD... 325 3e-087
gb|BI141561.1|BI141561 IP1_54_A03.b1_A002 Immature pannicle... 319 2e-085
gb|BI141217.1|BI141217 IP1_44_G02.b1_A002 Immature pannicle... 313 1e-083
gb|CF758316.1|CF758316 DSAF1_30_C04.g1_A011 Drought-stresse... 285 3e-075
gb|CF756543.1|CF756543 DSAF1_6_E06.b1_A011 Drought-stressed... 283 1e-074
gb|CF756620.1|CF756620 DSAF1_6_E06.g1_A011 Drought-stressed... 283 1e-074
gb|CF759227.1|CF759227 DSAF1_42_E08.b1_A011 Drought-stresse... 283 1e-074
gb|BI141301.1|BI141301 IP1_54_A05.g1_A002 Immature pannicle... 234 9e-060
gb|BI099634.1|BI099634 IP1_44_G02.g1_A002 Immature pannicle... 218 5e-055
gb|CF758631.1|CF758631 DSAF1_34_F07.g1_A011 Drought-stresse... 218 5e-055
gb|CL196012.1|CL196012 104_421_10942777_116_32314_001 Sorgh... 182 3e-044
gb|CW140068.1|CW140068 104_530_11135584_116_34913_056 Sorgh... 182 3e-044
gb|CW328843.1|CW328843 104_825_11479523_116_35999_046 Sorgh... 182 3e-044
gb|CW328844.1|CW328844 104_825_11479523_148_36000_046 Sorgh... 182 3e-044
gb|CW501006.1|CW501006 fsbb001f296j14f0 Sorghum methylation... 182 3e-044
gb|BI141299.1|BI141299 IP1_54_A03.g1_A002 Immature pannicle... 170 1e-040
gb|CW094282.1|CW094282 104_457_11000221_116_37473_051 Sorgh... 167 2e-039
gb|CL196011.1|CL196011 104_421_10942777_114_32310_001 Sorgh... 155 6e-036
gb|CW501007.1|CW501007 fsbb001f296j14k0 Sorghum methylation... 151 1e-034
gb|BG239822.1|BG239822 OV1_29_D11.g1_A002 Ovary 1 (OV1) Sor... 105 5e-021
gb|CL165406.1|CL165406 104_360_10808593_114_31818_193 Sorgh... 44 0.017
gb|CW145596.1|CW145596 104_538_11138549_148_34980_027 Sorgh... 44 0.017
gb|BZ423954.1|BZ423954 id55c06.g1 WGS-SbicolorF (DH5a methy... 42 0.067
gb|CW046793.1|CW046793 104_284_10512355_114_30219 Sorghum m... 42 0.067
gb|CW335573.1|CW335573 104_834_11483113_116_36084_007 Sorgh... 42 0.067
gb|CW448844.1|CW448844 fsbb001f182k15f0 Sorghum methylation... 42 0.067
gb|CW448845.1|CW448845 fsbb001f182k15k0 Sorghum methylation... 42 0.067
gb|CW494931.1|CW494931 fsbb001f286h11f0 Sorghum methylation... 42 0.067
gb|CW498007.1|CW498007 fsbb001f291a18f0 Sorghum methylation... 42 0.067
gb|CW498008.1|CW498008 fsbb001f291a18k0 Sorghum methylation... 42 0.067
gb|CL151818.1|CL151818 104_334_10779515_114_31361_299 Sorgh... 40 0.26
gb|CL167260.1|CL167260 104_364_10809944_114_31802_008 Sorgh... 40 0.26
gb|CL167261.1|CL167261 104_364_10809944_116_31803_008 Sorgh... 40 0.26
gb|CW027235.1|CW027235 104_253_10498396_116_30528 Sorghum m... 40 0.26
gb|CW060222.1|CW060222 104_303_10519743_1_30042 Sorghum met... 40 0.26
gb|CW119033.1|CW119033 104_495_11108532_148_34631_036 Sorgh... 40 0.26
gb|CW136648.1|CW136648 104_521_11118494_116_34845_051 Sorgh... 40 0.26
gb|CW138607.1|CW138607 104_528_11134785_116_34890_041 Sorgh... 40 0.26
gb|CW207269.1|CW207269 104_636_11188037_148_36967_025 Sorgh... 40 0.26
gb|CW215655.1|CW215655 104_648_11194656_148_37119_096 Sorgh... 40 0.26
gb|CW262355.1|CW262355 104_729_11230015_148_35205_018 Sorgh... 40 0.26
gb|CW445782.1|CW445782 fsbb001f171b23f0 Sorghum methylation... 40 0.26
gb|AW285308.2|AW285308 LG1_237_G01.g1_A002 Light Grown 1 (L... 40 0.26
gb|AW671236.1|AW671236 LG1_333_B02.b1_A002 Light Grown 1 (L... 40 0.26
gb|AW677139.1|AW677139 DG1_5_B05.b1_A002 Dark Grown 1 (DG1)... 40 0.26
gb|AW923542.1|AW923542 DG1_52_F08.g1_A002 Dark Grown 1 (DG1... 40 0.26
gb|BE355653.1|BE355653 DG1_115_B08.g1_A002 Dark Grown 1 (DG... 40 0.26
gb|BE357204.1|BE357204 DG1_147_F07.g1_A002 Dark Grown 1 (DG... 40 0.26
gb|BG053983.1|BG053983 OV2_2_F12.g1_A002 Ovary 2 (OV2) Sorg... 40 0.26
gb|BG054056.1|BG054056 OV2_1_H04.g1_A002 Ovary 2 (OV2) Sorg... 40 0.26
gb|BG357638.1|BG357638 OV2_32_D07.g1_A002 Ovary 2 (OV2) Sor... 40 0.26
gb|BG605901.1|BG605901 RHIZ2_83_A01.g1_A003 Rhizome2 (RHIZ2... 40 0.26
gb|BG739398.1|BG739398 EM1_82_D11.g1_A002 Embryo 1 (EM1) So... 40 0.26
gb|CD219864.1|CD219864 CCC1_59_D12.b1_A007 Callus culture/c... 40 0.26
gb|CD222346.1|CD222346 CCC1_21_C05.b1_A007 Callus culture/c... 40 0.26
gb|CD223454.1|CD223454 CCC1_28_F06.b1_A007 Callus culture/c... 40 0.26
gb|CD224141.1|CD224141 CCC1_32_H11.b1_A007 Callus culture/c... 40 0.26
gb|CD224264.1|CD224264 CCC1_33_F03.b1_A007 Callus culture/c... 40 0.26
gb|CD227868.1|CD227868 CCC1_56_C05.b1_A007 Callus culture/c... 40 0.26
gb|CD231043.1|CD231043 SS1_7_B09.g1_A012 Salt-stressed seed... 40 0.26
gb|CD232850.1|CD232850 SS1_10_G12.b1_A012 Salt-stressed see... 40 0.26
gb|CD233070.1|CD233070 SS1_11_H05.g1_A012 Salt-stressed see... 40 0.26
gb|CD422862.1|CD422862 SA1_38_C11.b1_A002 Salicylic acid-tr... 40 0.26
gb|CD426490.1|CD426490 SA1_21_B12.b1_A002 Salicylic acid-tr... 40 0.26
gb|CD431829.1|CD431829 ETH1_11_C08.b1_A002 Ethylene-treated... 40 0.26
gb|CD461569.1|CD461569 SA1_33_F08.b1_A002 Salicylic acid-tr... 40 0.26
gb|CD463706.1|CD463706 ETH1_46_B08.b1_A002 Ethylene-treated... 40 0.26
gb|CF074056.1|CF074056 FE1_21_B06.b1_A002 Iron-deficient se... 40 0.26
gb|CF074093.1|CF074093 FE1_21_H03.b1_A002 Iron-deficient se... 40 0.26
gb|CF074250.1|CF074250 FE1_23_D05.b1_A002 Iron-deficient se... 40 0.26
gb|CF431307.1|CF431307 NIT1_5_D02.b1_A002 Nitrogen-deficien... 40 0.26
gb|CF432969.1|CF432969 NIT1_20_E01.b1_A002 Nitrogen-deficie... 40 0.26
gb|CF483844.1|CF483844 POL1_1_C03.b1_A002 Pollen Sorghum bi... 40 0.26
gb|CF488855.1|CF488855 POL1_52_D08.g1_A002 Pollen Sorghum b... 40 0.26
gb|CN126472.1|CN126472 RHOH1_17_H02.b1_A002 Acid- and alkal... 40 0.26
gb|CN128884.1|CN128884 RHOH1_32_E07.b1_A002 Acid- and alkal... 40 0.26
gb|CN130724.1|CN130724 RHOH1_43_H05.b1_A002 Acid- and alkal... 40 0.26
gb|CN132285.1|CN132285 OX1_5_E12.b1_A002 Oxidatively-stress... 40 0.26
gb|CN133247.1|CN133247 OX1_11_B12.b1_A002 Oxidatively-stres... 40 0.26
gb|CN133257.1|CN133257 OX1_11_C12.b1_A002 Oxidatively-stres... 40 0.26
gb|CN134211.1|CN134211 OX1_25_A11.b1_A002 Oxidatively-stres... 40 0.26
gb|CN135639.1|CN135639 OX1_38_C10.b1_A002 Oxidatively-stres... 40 0.26
gb|CN137853.1|CN137853 OX1_60_C10.b1_A002 Oxidatively-stres... 40 0.26
gb|CN138170.1|CN138170 OX1_62_D10.b1_A002 Oxidatively-stres... 40 0.26
gb|CN139595.1|CN139595 OX1_23_B01.b1_A002 Oxidatively-stres... 40 0.26
gb|CN141691.1|CN141691 WOUND1_1_F03.b1_A002 Wounded leaves ... 40 0.26
gb|CN142468.1|CN142468 WOUND1_10_E08.b1_A002 Wounded leaves... 40 0.26
gb|CN142639.1|CN142639 WOUND1_11_F04.b1_A002 Wounded leaves... 40 0.26
gb|CN142791.1|CN142791 WOUND1_12_F02.b1_A002 Wounded leaves... 40 0.26
gb|CN142892.1|CN142892 WOUND1_13_A05.b1_A002 Wounded leaves... 40 0.26
gb|CN144283.1|CN144283 WOUND1_21_F07.b1_A002 Wounded leaves... 40 0.26
gb|CN144424.1|CN144424 WOUND1_22_D09.b1_A002 Wounded leaves... 40 0.26
gb|CN144557.1|CN144557 WOUND1_23_D04.b1_A002 Wounded leaves... 40 0.26
gb|CN144817.1|CN144817 WOUND1_25_D03.b2_A002 Wounded leaves... 40 0.26
gb|CN145020.1|CN145020 WOUND1_26_G06.b2_A002 Wounded leaves... 40 0.26
gb|CN145141.1|CN145141 WOUND1_27_B11.b2_A002 Wounded leaves... 40 0.26
gb|CN146579.1|CN146579 WOUND1_42_D08.b1_A002 Wounded leaves... 40 0.26
gb|CN146974.1|CN146974 WOUND1_46_B05.b1_A002 Wounded leaves... 40 0.26
gb|CN146986.1|CN146986 WOUND1_46_D06.b1_A002 Wounded leaves... 40 0.26
gb|CN148099.1|CN148099 WOUND1_54_E05.b1_A002 Wounded leaves... 40 0.26
gb|CN148182.1|CN148182 WOUND1_54_E05.g1_A002 Wounded leaves... 40 0.26
gb|CN148254.1|CN148254 WOUND1_55_D07.b1_A002 Wounded leaves... 40 0.26
gb|CN148860.1|CN148860 WOUND1_59_F07.b1_A002 Wounded leaves... 40 0.26
gb|CN149698.1|CN149698 WOUND1_64_H02.b1_A002 Wounded leaves... 40 0.26
gb|CN149832.1|CN149832 WOUND1_65_D06.b1_A002 Wounded leaves... 40 0.26
gb|CN149989.1|CN149989 WOUND1_66_E10.b1_A002 Wounded leaves... 40 0.26
gb|CN150101.1|CN150101 WOUND1_67_A02.b1_A002 Wounded leaves... 40 0.26
gb|CN151354.1|CN151354 WOUND1_75_A07.b1_A002 Wounded leaves... 40 0.26
gb|CN151700.1|CN151700 WOUND1_77_C01.b1_A002 Wounded leaves... 40 0.26
gb|CN152586.1|CN152586 WOUND1_83_B01.b1_A002 Wounded leaves... 40 0.26
gb|CX606656.1|CX606656 ANR1_4_F07.b1_A002 Anaerobic roots S... 40 0.26
gb|CX606785.1|CX606785 ANR1_5_A08.b1_A002 Anaerobic roots S... 40 0.26
gb|CX607037.1|CX607037 ANR1_6_G11.b1_A002 Anaerobic roots S... 40 0.26
gb|CX607388.1|CX607388 ANR1_8_G10.b1_A002 Anaerobic roots S... 40 0.26
gb|CX607535.1|CX607535 ANR1_29_F10.b1_A002 Anaerobic roots ... 40 0.26
gb|CX608012.1|CX608012 ANR1_32_D01.b1_A002 Anaerobic roots ... 40 0.26
gb|CX609348.1|CX609348 ANR1_12_D07.b1_A002 Anaerobic roots ... 40 0.26
gb|CX609508.1|CX609508 ANR1_13_D05.b1_A002 Anaerobic roots ... 40 0.26
gb|CX610000.1|CX610000 ANR1_16_B12.b1_A002 Anaerobic roots ... 40 0.26
gb|CX610482.1|CX610482 ANR1_19_B04.b1_A002 Anaerobic roots ... 40 0.26
gb|CX611187.1|CX611187 ANR1_23_D08.b1_A002 Anaerobic roots ... 40 0.26
gb|CX611220.1|CX611220 ANR1_23_G09.b1_A002 Anaerobic roots ... 40 0.26
gb|CX611683.1|CX611683 ANR1_26_C10.b1_A002 Anaerobic roots ... 40 0.26
gb|CX612239.1|CX612239 GABR1_1_G06.b1_A002 GA- or brassinol... 40 0.26
gb|CX612550.1|CX612550 GABR1_3_C05.b1_A002 GA- or brassinol... 40 0.26
gb|CX612948.1|CX612948 GABR1_5_H05.b1_A002 GA- or brassinol... 40 0.26
gb|CX612952.1|CX612952 GABR1_5_H09.b1_A002 GA- or brassinol... 40 0.26
gb|CX613126.1|CX613126 GABR1_6_H11.b1_A002 GA- or brassinol... 40 0.26
gb|CX613292.1|CX613292 GABR1_7_H02.b1_A002 GA- or brassinol... 40 0.26
gb|CX613397.1|CX613397 GABR1_8_A02.b1_A002 GA- or brassinol... 40 0.26
gb|CX613806.1|CX613806 GABR1_10_G04.b1_A002 GA- or brassino... 40 0.26
gb|CX614280.1|CX614280 GABR1_13_D05.b1_A002 GA- or brassino... 40 0.26
gb|CX614948.1|CX614948 GABR1_17_F09.b1_A002 GA- or brassino... 40 0.26
gb|CX615401.1|CX615401 GABR1_20_A01.b1_A002 GA- or brassino... 40 0.26
gb|CX615616.1|CX615616 GABR1_21_E11.b1_A002 GA- or brassino... 40 0.26
gb|CX615720.1|CX615720 GABR1_22_E11.b1_A002 GA- or brassino... 40 0.26
gb|CX618160.1|CX618160 GABR1_38_B09.b1_A002 GA- or brassino... 40 0.26
gb|CX618553.1|CX618553 GABR1_40_G03.b1_A002 GA- or brassino... 40 0.26
gb|CX618571.1|CX618571 GABR1_40_H10.b1_A002 GA- or brassino... 40 0.26
gb|CX619055.1|CX619055 GABR1_43_F06.b1_A002 GA- or brassino... 40 0.26
gb|CX619667.1|CX619667 GABR1_47_B08.b1_A002 GA- or brassino... 40 0.26
gb|CX619683.1|CX619683 GABR1_47_D04.b1_A002 GA- or brassino... 40 0.26
gb|CX619965.1|CX619965 GABR1_49_B04.b1_A002 GA- or brassino... 40 0.26
gb|CX620000.1|CX620000 GABR1_49_F01.b1_A002 GA- or brassino... 40 0.26
gb|CX620335.1|CX620335 GABR1_51_E09.b1_A002 GA- or brassino... 40 0.26
gb|CX620640.1|CX620640 GABR1_53_C11.b1_A002 GA- or brassino... 40 0.26
gb|CX620654.1|CX620654 GABR1_53_E03.b1_A002 GA- or brassino... 40 0.26
gb|CX621433.1|CX621433 GABR1_58_C07.b1_A002 GA- or brassino... 40 0.26
gb|CX621760.1|CX621760 GABR1_60_B08.b1_A002 GA- or brassino... 40 0.26
gb|CX621968.1|CX621968 GABR1_61_F03.b2_A002 GA- or brassino... 40 0.26
gb|CX623165.1|CX623165 GABR1_68_C12.b1_A002 GA- or brassino... 40 0.26
gb|CX623172.1|CX623172 GABR1_68_D07.b1_A002 GA- or brassino... 40 0.26
>gb|AW564981.1|AW564981 LG1_313_D01.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 769 bits (388), Expect = 0.0
Identities = 427/440 (97%)
Strand = Plus / Plus
Query: 53 ccccgccggcagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttg 112
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 14 ccccgcccgcagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttg 73
Query: 113 tgaactacggcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaca 172
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 74 tgaactacggcaaggagtatggccgccttgtcgtcatcgtcgacgtcgtcgaccagaaca 133
Query: 173 gggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccc 232
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 134 gggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccc 193
Query: 233 tgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaa 292
||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 194 tgactgatatcaagattgacattaaacgtgtcccaaagaagactacattgattaaggcaa 253
Query: 293 tggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattg 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggaggaagctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattg 313
Query: 353 ttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaaga 412
| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 314 tgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcgaaga 373
Query: 413 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 433
Query: 473 cttagattgctttggtggtt 492
||||||||||||||||||||
Sbjct: 434 cttagattgctttggtggtt 453
Score = 145 bits (73), Expect = 6e-033
Identities = 130/146 (89%), Gaps = 6/146 (4%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 464 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 521
Query: 550 tcaagatgtcaattttaaactggcttatttagatattttgtccaaaatgctattctgaat 609
||||||||||| |||| ||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 522 tcaagatgtcagttttgaactgccttgtttagatatt--gtctaaaatgctattctgaat 579
Query: 610 ctgagatagtgttgtattctgatatc 635
||||||||||||| ||||||| ||||
Sbjct: 580 ctgagatagtgttatattctggtatc 605
>gb|AW924401.1|AW924401 WS1_69_D08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 769 bits (388), Expect = 0.0
Identities = 427/440 (97%)
Strand = Plus / Plus
Query: 53 ccccgccggcagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttg 112
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 40 ccccgcccgcagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttg 99
Query: 113 tgaactacggcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaca 172
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 tgaactacggcaaggagtatggccgccttgtcgtcatcgtcgacgtcgtcgaccagaaca 159
Query: 173 gggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccc 232
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 160 gggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccc 219
Query: 233 tgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaa 292
||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 220 tgactgatatcaagattgacattaaacgtgtcccaaagaagactacattgattaaggcaa 279
Query: 293 tggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattg 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggaggaagctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattg 339
Query: 353 ttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaaga 412
| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 340 tgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcgaaga 399
Query: 413 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 459
Query: 473 cttagattgctttggtggtt 492
||||||||||||||||||||
Sbjct: 460 cttagattgctttggtggtt 479
Score = 129 bits (65), Expect = 4e-028
Identities = 116/130 (89%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 490 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 547
Query: 550 tcaagatgtcaattttaaactggcttatttagatattttgtccaaaatgctattctgaat 609
||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||||||||||
Sbjct: 548 tcaagatgtcagttttgaactgccttgtttagata--ttgtctaaaatgctattctgaat 605
Query: 610 ctgagatagt 619
||||||||||
Sbjct: 606 ctgagatagt 615
>gb|BE363727.1|BE363727 WS1_69_D08.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 591
Score = 769 bits (388), Expect = 0.0
Identities = 427/440 (97%)
Strand = Plus / Plus
Query: 53 ccccgccggcagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttg 112
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 40 ccccgcccgcagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttg 99
Query: 113 tgaactacggcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaca 172
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100 tgaactacggcaaggagtatggccgccttgtcgtcatcgtcgacgtcgtcgaccagaaca 159
Query: 173 gggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccc 232
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 160 gggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccc 219
Query: 233 tgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaa 292
||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 220 tgactgatatcaagattgacattaaacgtgtcccaaagaagactacattgattaaggcaa 279
Query: 293 tggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattg 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggaggaagctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattg 339
Query: 353 ttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaaga 412
| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 340 tgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcgaaga 399
Query: 413 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 459
Query: 473 cttagattgctttggtggtt 492
||||||||||||||||||||
Sbjct: 460 cttagattgctttggtggtt 479
Score = 97.6 bits (49), Expect = 1e-018
Identities = 88/99 (88%), Gaps = 4/99 (4%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 490 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 547
Query: 550 tcaagatgtcaattttaaactggcttatttagatatttt 588
||||||||||| |||| ||||| ||| ||||||||||||
Sbjct: 548 tcaagatgtcagttttgaactgccttgtttagatatttt 586
>gb|BG048579.1|BG048579 OV1_14_D09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 761 bits (384), Expect = 0.0
Identities = 426/440 (96%)
Strand = Plus / Plus
Query: 53 ccccgccggcagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttg 112
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 36 ccccgcccgcagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttg 95
Query: 113 tgaactacggcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaca 172
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 96 tgaactacggcaaggagtatggccgccttgtcgtcatcgtcgacgtcgtcgaccagaaca 155
Query: 173 gggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccc 232
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 156 gggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccc 215
Query: 233 tgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaa 292
||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 216 tgactgatatcaagattgacattaaacgtgtcccaaagaagactacattgagtaaggcaa 275
Query: 293 tggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattg 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tggaggaagctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattg 335
Query: 353 ttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaaga 412
| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 336 tgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcgaaga 395
Query: 413 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctg 455
Query: 473 cttagattgctttggtggtt 492
||||||||||||||||||||
Sbjct: 456 cttagattgctttggtggtt 475
Score = 77.8 bits (39), Expect = 1e-012
Identities = 72/81 (88%), Gaps = 4/81 (4%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 486 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 543
Query: 550 tcaagatgtcaattttaaact 570
||||||||||| |||| ||||
Sbjct: 544 tcaagatgtcagttttgaact 564
>gb|CD207838.1|CD207838 HS1_35_D06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_35_D06_A012 3', mRNA sequence
Length = 596
Score = 735 bits (371), Expect = 0.0
Identities = 416/431 (96%)
Strand = Plus / Plus
Query: 62 cagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacg 121
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 cagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacg 60
Query: 122 gcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttg 181
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 gcaaggagtatggccgccttgtcgtcatggtcgacgtcgtcgaccagaacagggctcttg 120
Query: 182 tggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgaca 241
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 tggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccctgactgata 180
Query: 242 tcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaag 301
|||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 181 tcaagattgacattaaacgtgtcccaaagaagcctacattgattaaggcaatggaggaag 240
Query: 302 ctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaaga 361
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 ctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattgtgcagaaga 300
Query: 362 ggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggg 421
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ggagagcatcgttcaatgactttgacaggttcaagatcatgttggcgaagatcaagaggg 360
Query: 422 gtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattg 420
Query: 482 ctttggtggtt 492
|||||||||||
Sbjct: 421 ctttggtggtt 431
Score = 163 bits (82), Expect = 3e-038
Identities = 142/159 (89%), Gaps = 6/159 (3%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 442 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 499
Query: 550 tcaagatgtcaattttaaactggcttatttagatattttgtccaaaatgctattctgaat 609
||||||||||| |||| ||||| ||| |||||||||| | | |||||||||||||||||
Sbjct: 500 tcaagatgtcagttttgaactgccttgtttagatattgtat--aaaatgctattctgaat 557
Query: 610 ctgagatagtgttgtattctgatatctatcaagtgttgc 648
||||||||||||| ||||||| |||||||||||||||||
Sbjct: 558 ctgagatagtgttatattctggtatctatcaagtgttgc 596
>gb|BG048507.1|BG048507 OV1_14_D09.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 426
Score = 672 bits (339), Expect = 0.0
Identities = 378/391 (96%)
Strand = Plus / Plus
Query: 53 ccccgccggcagccaaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttg 112
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 36 ccccgcccgcagccaaaatgccgttcaagaggttcgtggagatcgggcgggtggctcttg 95
Query: 113 tgaactacggcaaggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaca 172
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 96 tgaactacggcaaggagtatggccgccttgtcgtcatcgtcgacgtcgtcgaccagaaca 155
Query: 173 gggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccc 232
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 156 gggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggctttccc 215
Query: 233 tgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggcaa 292
||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 216 tgactgatatcaagattgacattaaacgtgtcccaaagaagactacattgattaaggcaa 275
Query: 293 tggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattg 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tggaggaagctgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctgattg 335
Query: 353 ttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaaga 412
| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 336 tgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcgaaga 395
Query: 413 tcaagaggggtggtgccatcaggcaagagct 443
|||||||||||||||||||||||||||||||
Sbjct: 396 tcaagaggggtggtgccatcaggcaagagct 426
>gb|AW924449.1|AW924449 WS1_69_D08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 472
Score = 545 bits (275), Expect = e-153
Identities = 311/323 (96%)
Strand = Plus / Plus
Query: 170 acagggctcttgtggatgcccccgacatggttcgttgccaaatgaacttcaagcggcttt 229
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 1 acagggctcttgtggatgcccctgacatggtccgttgccaaatgaacttcaagcggcttt 60
Query: 230 ccctgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatcaagg 289
|||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 61 ccctgagtgatatcaagattgacattaaacgtgtcccaaagaagactacattgattaagg 120
Query: 290 caatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctga 349
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 caatggaggaagttgatgtgaaaaccaagtgggagaatagctcatggggcaagaagctga 180
Query: 350 ttgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttggcga 409
|||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 181 ttgtgcagaagaggagagcatcgctcaatgactttgacaggttcaagatcatgttggcga 240
Query: 410 agatcaagaggggtggtgccatcaggcaagagcttgctaagcttaaaaaggtggctgctg 469
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 agatcaagaggggtggtgccatcaggcaagagcttgttaagcttaaaaaggtggctgctg 300
Query: 470 ctgcttagattgctttggtggtt 492
|||||||||||||||||||||||
Sbjct: 301 ctgcttagattgctttggtggtt 323
Score = 129 bits (65), Expect = 4e-028
Identities = 116/130 (89%), Gaps = 6/130 (4%)
Strand = Plus / Plus
Query: 500 gcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttgtcaagatg 557
|||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 342 gcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttgtcaagatg 399
Query: 558 tcaattttaaactggcttatttagatattttgtccaaaatgctattctgaatctgagata 617
||| |||| ||||| ||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 400 tcagttttgaactgccttgtttagatatt--gtctaaaatgctattctgaatctgagata 457
Query: 618 gtgttgtatt 627
||||| ||||
Sbjct: 458 gtgttatatt 467
>gb|BE352900.1|BE352900 LG1_313_F01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 458
Score = 533 bits (269), Expect = e-150
Identities = 296/305 (97%)
Strand = Plus / Plus
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
|||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 cccctgacatggtccgttgccaaatgaacttcaagcggctttccctgactgatatcaaga 60
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 61 ttgacattaaacgtgtcccaaagaagactacattgattaaggcaatggaggaagctgatg 120
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 tgaaaaccaagtgggagaatagctcatggggcaagaagctgattgtgcagaagaggagag 180
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 catcgctcaatgactttgacaggttcaagatcatgttggcgaagatcaagaggggtggtg 240
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 300
Query: 488 tggtt 492
|||||
Sbjct: 301 tggtt 305
Score = 145 bits (73), Expect = 6e-033
Identities = 130/146 (89%), Gaps = 6/146 (4%)
Strand = Plus / Plus
Query: 492 tcctctatgcttcgatctcttgaaa--tgtaatgcacgaattactttgacagttagcttg 549
|||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 316 tcctttatgcttcgatgtcttgaaaaatgtaatgcacgaattacttc--cagttagcttg 373
Query: 550 tcaagatgtcaattttaaactggcttatttagatattttgtccaaaatgctattctgaat 609
||||||||||| |||| ||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 374 tcaagatgtcagttttgaactgccttgtttagatatt--gtctaaaatgctattctgaat 431
Query: 610 ctgagatagtgttgtattctgatatc 635
||||||||||||| ||||||| ||||
Sbjct: 432 ctgagatagtgttatattctggtatc 457
>gb|CF071464.1|CF071464 FE1_13_E02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_13_E02_A002 5', mRNA sequence
Length = 649
Score = 466 bits (235), Expect = e-129
Identities = 346/383 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 84 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 143
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 144 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 203
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 204 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 263
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 264 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 323
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 324 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 383
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 384 gcgctcaatgactttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgct 443
Query: 430 atcaggcaagagcttgctaagct 452
|||||||||||||| || |||||
Sbjct: 444 atcaggcaagagctcgccaagct 466
>gb|AW287207.2|AW287207 LG1_267_H05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 468
Score = 458 bits (231), Expect = e-127
Identities = 345/383 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 85 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 144
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 145 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 204
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 205 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 264
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 265 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 324
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 325 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 384
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 385 gcgctcaatgactttgacaggttcaaggtcatgctggcaaagatcaagaggggtggcgct 444
Query: 430 atcaggcaagagcttgctaagct 452
|||||||||||||| || |||||
Sbjct: 445 atcaggcaagagctcgccaagct 467
>gb|CD429909.1|CD429909 ETH1_16_F11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_F11_A002 3', mRNA sequence
Length = 602
Score = 458 bits (231), Expect = e-127
Identities = 345/383 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 16 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 75
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 76 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 135
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 136 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 195
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 196 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 255
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 256 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 315
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
| |||||||||||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 316 gcgctcaatgactttgacaggttcaaggtcatgctggcaaagaccaagaggggtggtgct 375
Query: 430 atcaggcaagagcttgctaagct 452
|||||||||||||| || |||||
Sbjct: 376 atcaggcaagagctcgccaagct 398
>gb|CD429957.1|CD429957 ETH1_16_F11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_F11_A002 5', mRNA sequence
Length = 694
Score = 458 bits (231), Expect = e-127
Identities = 345/383 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 97 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 156
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 157 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 216
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 217 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 276
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 277 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 336
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 337 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 396
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
| |||||||||||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 397 gcgctcaatgactttgacaggttcaaggtcatgctggcaaagaccaagaggggtggtgct 456
Query: 430 atcaggcaagagcttgctaagct 452
|||||||||||||| || |||||
Sbjct: 457 atcaggcaagagctcgccaagct 479
>gb|BG049369.1|BG049369 OV1_19_B02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 567
Score = 456 bits (230), Expect = e-126
Identities = 341/378 (90%)
Strand = Plus / Plus
Query: 75 gttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagtatgg 134
||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1 gttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggactatgg 60
Query: 135 ccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccga 194
||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||
Sbjct: 61 ccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctga 120
Query: 195 catggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacat 254
||| | | ||||| || ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 121 tatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagattgacat 180
Query: 255 taaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaag 314
||||||||||| |||||||| || ||||||||||| |||||||||||||| ||||| |
Sbjct: 181 caaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtgaagac 240
Query: 315 caagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcact 374
|||||||||||| || |||||||||||||||||||| |||||||||||||| ||| | ||
Sbjct: 241 caagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggcagcgct 300
Query: 375 caatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcag 434
|||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 301 caatgactttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgctatcag 360
Query: 435 gcaagagcttgctaagct 452
||||||||| || |||||
Sbjct: 361 gcaagagctcgccaagct 378
>gb|BG240198.1|BG240198 OV1_19_B02.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 426
Score = 414 bits (209), Expect = e-114
Identities = 311/345 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 82 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 141
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 142 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 201
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 202 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 261
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 262 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 321
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 322 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 381
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatc 414
| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 382 gcgctcaatgactttgacaggttcaaggtcatgctggcaaagatc 426
>gb|BG240200.1|BG240200 OV1_19_B04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 410
Score = 398 bits (201), Expect = e-109
Identities = 297/329 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 82 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 141
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 142 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 201
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 202 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 261
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 262 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 321
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||| |||
Sbjct: 322 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagaggagggca 381
Query: 370 tcactcaatgactttgacaggttcaaggt 398
| ||||||||||||||||||||||||||
Sbjct: 382 gcgctcaatgactttgacaggttcaaggt 410
>gb|BI141563.1|BI141563 IP1_54_A05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 368
Score = 355 bits (179), Expect = 3e-096
Identities = 266/295 (90%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 74 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 133
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 134 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 193
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 194 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 253
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 254 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 313
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagagga 364
|| | |||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 314 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaagagga 368
>gb|BG049371.1|BG049371 OV1_19_B04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 349 bits (176), Expect = 2e-094
Identities = 278/312 (89%)
Strand = Plus / Plus
Query: 141 cgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatggt 200
||||||||||||||| || ||||||||||||||||| |||||||| ||||| || ||| |
Sbjct: 1 cgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatgat 60
Query: 201 tcgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacattaaacg 260
| ||||| || ||||||||||| ||||| || |||||||||||||||||||| |||||
Sbjct: 61 caggtgccagataaacttcaagcgtctttcacttactgacatcaagattgacatcaaacg 120
Query: 261 tgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaagtg 320
|||||| |||||||| || ||||||||||| |||||||||||||| ||||| | ||||||
Sbjct: 121 tgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtgaagaccaagtg 180
Query: 321 ggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactcaatga 380
|||||| || |||||||||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct: 181 ggagaacagttcatggggcaagaagctgatcgttcagaagaggagggcagcgctcaatga 240
Query: 381 ctttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaaga 440
|||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 241 ctttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgctatcaggcaaga 300
Query: 441 gcttgctaagct 452
||| || |||||
Sbjct: 301 gctcgccaagct 312
>gb|AW284103.1|AW284103 LG1_267_H05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 339 bits (171), Expect = 2e-091
Identities = 276/311 (88%)
Strand = Plus / Plus
Query: 142 gtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcccccgacatggtt 201
|||||||||||||| || ||||||||||||||||| |||||||| ||||| || ||| |
Sbjct: 1 gtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcccctgatatgatc 60
Query: 202 cgttgccaaatgaacttcaagcggctttccctgactgacatcaagattgacattaaacgt 261
| ||||| || ||||||||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 61 aggtgccagataaacttcaagcgtctttcacttactgacatcaagattgacatcaaacgt 120
Query: 262 gtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaagtgg 321
||||| |||||||| || ||||||||||| |||||||||||||| ||||| | |||||||
Sbjct: 121 gtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtgaagaccaagtgg 180
Query: 322 gagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactcaatgac 381
||||| || |||||||||||||||||||| |||||||||||||| ||| | |||||||||
Sbjct: 181 gagaacagttcatggggcaagaagctgatcgttcagaagaggagggcagcgctcaatgac 240
Query: 382 tttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaagag 441
||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||
Sbjct: 241 tttgacaggttcaaggtcatgctggcaaagatcaagaggggtggcgctatcaggcaagag 300
Query: 442 cttgctaagct 452
|| || |||||
Sbjct: 301 ctcgccaagct 311
>gb|BQ655982.1|BQ655982 pRC0201 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0201, mRNA sequence
Length = 533
Score = 325 bits (164), Expect = 3e-087
Identities = 293/332 (88%), Gaps = 3/332 (0%)
Strand = Plus / Plus
Query: 123 caaggagtatggccgcctcgt-cgtcatcgtcgacgtcgtcgaccagaacagggctcttg 181
|||||| ||||||||| |||| |||||||||||| || |||||||| |||||||| ||||
Sbjct: 1 caaggactatggccgc-tcgtgcgtcatcgtcgatgtggtcgaccataacagggcacttg 59
Query: 182 tggatgcccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgaca 241
|||| ||||| || ||| | | ||||| || ||||||||||| ||||| || |||||||
Sbjct: 60 tggacgcccctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgaca 119
Query: 242 tcaagattgacattaaacgtgtcccaaagaagactacactgatcaaggca-atggaggaa 300
||||||||||||| ||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 120 tcaagattgacatcaaacgtgtccccaagaagacaaccctgatcaaggcagatggaggaa 179
Query: 301 gctgatgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaag 360
||||| ||||| | |||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 180 gctgacgtgaagaccaagtgggagaacagttcatggggcaagaagctgatcgttcagaag 239
Query: 361 aggagagcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagagg 420
||||| ||| | |||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 240 aggagggcagcgctcaatgactttgacaggttcaaggtcatgctggcaaagatcaagagg 299
Query: 421 ggtggtgccatcaggcaagagcttgctaagct 452
|||||||| |||| ||||||||| || |||||
Sbjct: 300 ggtggtgctatcacgcaagagctcgccaagct 331
>gb|BI141561.1|BI141561 IP1_54_A03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 346
Score = 319 bits (161), Expect = 2e-085
Identities = 245/273 (89%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 74 atgccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggac 133
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 134 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 193
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || |||||||||||||||
Sbjct: 194 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcaagatt 253
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 254 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 313
Query: 310 aaaagcaagtgggagaatagctcatggggcaag 342
|| | |||||||||||| || ||||||||||||
Sbjct: 314 aagaccaagtgggagaacagttcatggggcaag 346
>gb|BI141217.1|BI141217 IP1_44_G02.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 359
Score = 313 bits (158), Expect = 1e-083
Identities = 254/286 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 74 atgccgttcgagaggttcgtggagatcgggcgcgtggccctggtgaactacggaaaggac 133
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 134 tatggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 193
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| || ||||||||||| ||||| || ||||||||| |||||
Sbjct: 194 cctgatatgatcaggtgccagataaacttcaagcgtctttcacttactgacatcgagatt 253
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 254 gacatcaaacgtgtccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtg 313
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttc 355
|| | |||||||||||| || |||||||||||||||||||| ||||
Sbjct: 314 aagaccaagtgggagaacagttcatggggcaagaagctgatcgttc 359
>gb|CF758316.1|CF758316 DSAF1_30_C04.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_30_C04_A011 3', mRNA sequence
Length = 529
Score = 285 bits (144), Expect = 3e-075
Identities = 213/236 (90%)
Strand = Plus / Plus
Query: 217 ttcaagcggctttccctgactgacatcaagattgacattaaacgtgtcccaaagaagact 276
|||||||| ||||| || |||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 1 ttcaagcgtctttcacttactgacatcaagattgacatcaaaagtgtccccaagaagaca 60
Query: 277 acactgatcaaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatgg 336
|| ||||||||||| |||||||||||||| ||||| | |||||||||||| || ||||||
Sbjct: 61 accctgatcaaggcgatggaggaagctgacgtgaagaccaagtgggagaacagttcatgg 120
Query: 337 ggcaagaagctgattgttcagaagaggagagcatcactcaatgactttgacaggttcaag 396
|||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct: 121 ggcaagaagctgatcgttcagaagaggagggcagcgctcaatgactttgacaggttcaag 180
Query: 397 gtcatgttggcgaagatcaagaggggtggtgccatcaggcaagagcttgctaagct 452
|||||| |||| |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 181 gtcatgctggcaaagatcaagaggggtggtgctatcaggcaagagctcgccaagct 236
>gb|CF756543.1|CF756543 DSAF1_6_E06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_E06_A011 5', mRNA sequence
Length = 427
Score = 283 bits (143), Expect = 1e-074
Identities = 206/227 (90%)
Strand = Plus / Plus
Query: 226 ctttccctgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatc 285
||||| || |||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 1 ctttcacttactgacatcaagattgacatcaaacgtgtccccaagaagacaaccctgatc 60
Query: 286 aaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaag 345
||||| |||||||||||||| ||||| | |||||||||||| || |||||||||||||||
Sbjct: 61 aaggcgatggaggaagctgacgtgaagaccaagtgggagaacagttcatggggcaagaag 120
Query: 346 ctgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttg 405
||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| ||
Sbjct: 121 ctgatcgttcagaagaggagggcagcgctcaatgactttgacaggttcaaggtcatgctg 180
Query: 406 gcgaagatcaagaggggtggtgccatcaggcaagagcttgctaagct 452
|| |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 181 gcaaagatcaagaggggtggtgctatcaggcaagagctcgccaagct 227
>gb|CF756620.1|CF756620 DSAF1_6_E06.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_6_E06_A011 3', mRNA sequence
Length = 391
Score = 283 bits (143), Expect = 1e-074
Identities = 206/227 (90%)
Strand = Plus / Plus
Query: 226 ctttccctgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatc 285
||||| || |||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 1 ctttcacttactgacatcaagattgacatcaaacgtgtccccaagaagacaaccctgatc 60
Query: 286 aaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaag 345
||||| |||||||||||||| ||||| | |||||||||||| || |||||||||||||||
Sbjct: 61 aaggcgatggaggaagctgacgtgaagaccaagtgggagaacagttcatggggcaagaag 120
Query: 346 ctgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttg 405
||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| ||
Sbjct: 121 ctgatcgttcagaagaggagggcagcgctcaatgactttgacaggttcaaggtcatgctg 180
Query: 406 gcgaagatcaagaggggtggtgccatcaggcaagagcttgctaagct 452
|| |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 181 gcaaagatcaagaggggtggtgctatcaggcaagagctcgccaagct 227
>gb|CF759227.1|CF759227 DSAF1_42_E08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_42_E08_A011 5', mRNA sequence
Length = 389
Score = 283 bits (143), Expect = 1e-074
Identities = 206/227 (90%)
Strand = Plus / Plus
Query: 226 ctttccctgactgacatcaagattgacattaaacgtgtcccaaagaagactacactgatc 285
||||| || |||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 1 ctttcacttactgacatcaagattgacatcaaacgtgtccccaagaagacaaccctgatc 60
Query: 286 aaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaagaag 345
||||| |||||||||||||| ||||| | |||||||||||| || |||||||||||||||
Sbjct: 61 aaggcgatggaggaagctgacgtgaagaccaagtgggagaacagttcatggggcaagaag 120
Query: 346 ctgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatgttg 405
||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| ||
Sbjct: 121 ctgatcgttcagaagaggagggcagcgctcaatgactttgacaggttcaaggtcatgctg 180
Query: 406 gcgaagatcaagaggggtggtgccatcaggcaagagcttgctaagct 452
|| |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 181 gcaaagatcaagaggggtggtgctatcaggcaagagctcgccaagct 227
>gb|BI141301.1|BI141301 IP1_54_A05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 393
Score = 234 bits (118), Expect = 9e-060
Identities = 172/190 (90%)
Strand = Plus / Plus
Query: 263 tcccaaagaagactacactgatcaaggcaatggaggaagctgatgtgaaaagcaagtggg 322
|||| |||||||| || ||||||||||| |||||||||||||| ||||| | ||||||||
Sbjct: 1 tccccaagaagacaaccctgatcaaggcgatggaggaagctgacgtgaagaccaagtggg 60
Query: 323 agaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactcaatgact 382
|||| || |||||||||||||||||||| |||||||||||||| ||| | ||||||||||
Sbjct: 61 agaacagttcatggggcaagaagctgatcgttcagaagaggagggcagcgctcaatgact 120
Query: 383 ttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaagagc 442
|||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||
Sbjct: 121 ttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgctatcaggcaagagc 180
Query: 443 ttgctaagct 452
| || |||||
Sbjct: 181 tcgccaagct 190
>gb|BI099634.1|BI099634 IP1_44_G02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 395
Score = 218 bits (110), Expect = 5e-055
Identities = 174/194 (89%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 260 gtgtcccaaagaagactacactgatcaaggcaatggaggaagctgat-gtgaaaagcaag 318
||||||| |||||||| || |||||||||| ||||||||||||||| ||||| | ||||
Sbjct: 5 gtgtccccaagaagacaaccttgatcaaggcgatggaggaagctgatcgtgaagaccaag 64
Query: 319 tgggagaatagctcatggggcaagaagctgattgttcagaagaggagagcatcactcaat 378
|||||||| || ||||||||||||||| |||| |||||||||||||| ||| | ||||||
Sbjct: 65 tgggagaacagttcatggggcaagaagttgatcgttcagaagaggagggcagcgctcaat 124
Query: 379 gactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaa 438
|||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 125 gactttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgctatcaggcaa 184
Query: 439 gagcttgctaagct 452
||||| || |||||
Sbjct: 185 gagctcgccaagct 198
>gb|CF758631.1|CF758631 DSAF1_34_F07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_34_F07_A011 3', mRNA sequence
Length = 463
Score = 218 bits (110), Expect = 5e-055
Identities = 155/170 (91%)
Strand = Plus / Plus
Query: 283 atcaaggcaatggaggaagctgatgtgaaaagcaagtgggagaatagctcatggggcaag 342
|||||||| |||||||||||||| ||||| | |||||||||||| || ||||||||||||
Sbjct: 1 atcaaggcgatggaggaagctgacgtgaagaccaagtgggagaacagttcatggggcaag 60
Query: 343 aagctgattgttcagaagaggagagcatcactcaatgactttgacaggttcaaggtcatg 402
|||||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 61 aagctgatcgttcagaagaggagggcagcgctcaatgactttgacaggttcaaggtcatg 120
Query: 403 ttggcgaagatcaagaggggtggtgccatcaggcaagagcttgctaagct 452
|||| |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 121 ctggcaaagatcaagaggggtggtgctatcaggcaagagctcgccaagct 170
>gb|CL196012.1|CL196012 104_421_10942777_116_32314_001 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942777, DNA
sequence
Length = 642
Score = 182 bits (92), Expect = 3e-044
Identities = 101/104 (97%)
Strand = Plus / Minus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 113 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 54
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 53 tggccgccttgtcgtcatcgtcgacgtcgtcgaccagaacaggg 10
>gb|CW140068.1|CW140068 104_530_11135584_116_34913_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135584, DNA
sequence
Length = 667
Score = 182 bits (92), Expect = 3e-044
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 206 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 265
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 266 tggccgccttgtcgtcatcgtcgacgtcgtcgaccagaacaggg 309
>gb|CW328843.1|CW328843 104_825_11479523_116_35999_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479523, DNA
sequence
Length = 685
Score = 182 bits (92), Expect = 3e-044
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 523 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 582
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 583 tggccgccttgtcgtcatcgtcgacgtcgtcgaccagaacaggg 626
>gb|CW328844.1|CW328844 104_825_11479523_148_36000_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479523, DNA
sequence
Length = 699
Score = 182 bits (92), Expect = 3e-044
Identities = 101/104 (97%)
Strand = Plus / Minus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 433 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 374
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 373 tggccgccttgtcgtcatcgtcgacgtcgtcgaccagaacaggg 330
>gb|CW501006.1|CW501006 fsbb001f296j14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f296j14, DNA
sequence
Length = 671
Score = 182 bits (92), Expect = 3e-044
Identities = 101/104 (97%)
Strand = Plus / Minus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 545 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 486
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 485 tggccgccttgtcgtcatcgtcgacgtcgtcgaccagaacaggg 442
>gb|BI141299.1|BI141299 IP1_54_A03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 329
Score = 170 bits (86), Expect = 1e-040
Identities = 113/122 (92%)
Strand = Plus / Plus
Query: 331 tcatggggcaagaagctgattgttcagaagaggagagcatcactcaatgactttgacagg 390
|||||||||||||||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 2 tcatggggcaagaagctgatcgttcagaagaggagggcagcgctcaatgactttgacagg 61
Query: 391 ttcaaggtcatgttggcgaagatcaagaggggtggtgccatcaggcaagagcttgctaag 450
|||||||||||| |||| |||||||||||||||||||| |||||||||||||| || |||
Sbjct: 62 ttcaaggtcatgctggcaaagatcaagaggggtggtgctatcaggcaagagctcgccaag 121
Query: 451 ct 452
||
Sbjct: 122 ct 123
>gb|CW094282.1|CW094282 104_457_11000221_116_37473_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11000221, DNA
sequence
Length = 690
Score = 167 bits (84), Expect = 2e-039
Identities = 99/104 (95%)
Strand = Plus / Minus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 437 gccgttcaagaggttcgtggagatcgggcgcgtggccctggtgaactacggcaaggacta 378
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
|||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 377 tggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacaggg 334
>gb|CL196011.1|CL196011 104_421_10942777_114_32310_001 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942777, DNA
sequence
Length = 722
Score = 155 bits (78), Expect = 6e-036
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 633 gccgttcaagaggttcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 692
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgt 161
||||||||| ||||||||||||||||||||
Sbjct: 693 tggccgccttgtcgtcatcgtcgacgtcgt 722
>gb|CW501007.1|CW501007 fsbb001f296j14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f296j14, DNA
sequence
Length = 706
Score = 151 bits (76), Expect = 1e-034
Identities = 97/104 (93%)
Strand = Plus / Plus
Query: 72 gccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggagta 131
|||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 334 gccggtcaagagggtcgtggagatcgggcgggtggctcttgtgaactacggcaaggagta 393
Query: 132 tggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacaggg 175
||| ||||| |||||||||||||||| |||||||||||||||||
Sbjct: 394 tgggcgccttgtcgtcatcgtcgacggcgtcgaccagaacaggg 437
>gb|BG239822.1|BG239822 OV1_29_D11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 195
Score = 105 bits (53), Expect = 5e-021
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 375 caatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgccatcag 434
||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 1 caatgcctttgacaggttcaaggtcatgctggcaaagatcaagaggggtggtgctatcag 60
Query: 435 gcaagagct 443
|||||||||
Sbjct: 61 gcaagagct 69
>gb|CL165406.1|CL165406 104_360_10808593_114_31818_193 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808593, DNA
sequence
Length = 502
Score = 44.1 bits (22), Expect = 0.017
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 140 tcgtcgtcatcgtcgacgtcgtcgac 165
|||||||| |||||||||||||||||
Sbjct: 323 tcgtcgtcgtcgtcgacgtcgtcgac 348
>gb|CW145596.1|CW145596 104_538_11138549_148_34980_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138549, DNA
sequence
Length = 721
Score = 44.1 bits (22), Expect = 0.017
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 140 tcgtcgtcatcgtcgacgtcgtcgac 165
|||||||| |||||||||||||||||
Sbjct: 432 tcgtcgtcgtcgtcgacgtcgtcgac 407
>gb|BZ423954.1|BZ423954 id55c06.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id55c06 5', DNA sequence
Length = 714
Score = 42.1 bits (21), Expect = 0.067
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 134 gccgcctcgtcgtcatcgtcgacgtcgtc 162
|||||||||||||| |||||| |||||||
Sbjct: 32 gccgcctcgtcgtcgtcgtcgtcgtcgtc 60
>gb|CW046793.1|CW046793 104_284_10512355_114_30219 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512355, DNA
sequence
Length = 276
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 166 tcgtcgtcttcgtcgacgtcgtcga 190
>gb|CW335573.1|CW335573 104_834_11483113_116_36084_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483113, DNA
sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 587 tcgtcgtcttcgtcgacgtcgtcga 563
>gb|CW448844.1|CW448844 fsbb001f182k15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182k15, DNA
sequence
Length = 784
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 425 tcgtcgtcttcgtcgacgtcgtcga 401
>gb|CW448845.1|CW448845 fsbb001f182k15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182k15, DNA
sequence
Length = 678
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 444 tcgtcgtcttcgtcgacgtcgtcga 468
>gb|CW494931.1|CW494931 fsbb001f286h11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286h11, DNA
sequence
Length = 618
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 296 tcgtcgtcttcgtcgacgtcgtcga 272
>gb|CW498007.1|CW498007 fsbb001f291a18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291a18, DNA
sequence
Length = 594
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 434 tcgtcgtcttcgtcgacgtcgtcga 458
>gb|CW498008.1|CW498008 fsbb001f291a18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f291a18, DNA
sequence
Length = 735
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 140 tcgtcgtcatcgtcgacgtcgtcga 164
|||||||| ||||||||||||||||
Sbjct: 664 tcgtcgtcttcgtcgacgtcgtcga 640
>gb|CL151818.1|CL151818 104_334_10779515_114_31361_299 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779515, DNA
sequence
Length = 616
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 140 tcgtcgtcatcgtcgacgtcgtcgacca 167
|||||||| |||||| ||||||||||||
Sbjct: 172 tcgtcgtcgtcgtcgtcgtcgtcgacca 199
>gb|CL167260.1|CL167260 104_364_10809944_114_31802_008 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809944, DNA
sequence
Length = 637
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 142 gtcgtcatcgtcgacgtcgtcgac 165
|||||| |||||||||||||||||
Sbjct: 258 gtcgtcgtcgtcgacgtcgtcgac 235
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 277,996
Number of Sequences: 832831
Number of extensions: 277996
Number of successful extensions: 92706
Number of sequences better than 0.5: 170
Number of HSP's better than 0.5 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92479
Number of HSP's gapped (non-prelim): 207
length of query: 690
length of database: 491,359,669
effective HSP length: 19
effective length of query: 671
effective length of database: 475,535,880
effective search space: 319084575480
effective search space used: 319084575480
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)