BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738980.2.1
(917 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 460 e-127
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 280 2e-073
gb|CW144970.1|CW144970 104_537_11138222_116_34973_057 Sorgh... 206 3e-051
gb|CW144971.1|CW144971 104_537_11138222_148_34969_057 Sorgh... 206 3e-051
gb|CW301870.1|CW301870 104_785_11464426_116_36263_033 Sorgh... 206 3e-051
gb|AW678260.1|AW678260 WS1_14_C01.b1_A002 Water-stressed 1 ... 206 3e-051
gb|AW678342.1|AW678342 WS1_14_C01.g1_A002 Water-stressed 1 ... 206 3e-051
gb|CW141122.1|CW141122 104_532_11136149_148_34928_031 Sorgh... 178 6e-043
gb|CW467394.1|CW467394 fsbb001f219b03f0 Sorghum methylation... 170 1e-040
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 163 4e-038
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 163 4e-038
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 155 9e-036
gb|AW679039.1|AW679039 WS1_22_H01.b1_A002 Water-stressed 1 ... 145 8e-033
gb|AW679107.1|AW679107 WS1_22_H01.g1_A002 Water-stressed 1 ... 115 7e-024
gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorgh... 98 2e-018
gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1)... 98 2e-018
gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1)... 98 2e-018
gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) So... 98 2e-018
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 98 2e-018
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 98 2e-018
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 98 2e-018
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 98 2e-018
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 86 7e-015
gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorgh... 86 7e-015
gb|CW256509.1|CW256509 104_721_11226831_148_35142_054 Sorgh... 80 4e-013
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 80 4e-013
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 80 4e-013
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 80 4e-013
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 80 4e-013
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 80 4e-013
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 78 2e-012
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 78 2e-012
gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorgh... 78 2e-012
gb|CW401979.1|CW401979 fsbb001f093b04f0 Sorghum methylation... 78 2e-012
gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 78 2e-012
gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorgh... 76 6e-012
gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1... 76 6e-012
gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1... 76 6e-012
gb|CW161070.1|CW161070 104_567_11150217_148_36416_033 Sorgh... 74 3e-011
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 74 3e-011
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 74 3e-011
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 74 3e-011
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 72 1e-010
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 72 1e-010
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 72 1e-010
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 72 1e-010
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 72 1e-010
gb|AW286086.2|AW286086 LG1_261_C01.b1_A002 Light Grown 1 (L... 72 1e-010
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 72 1e-010
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 72 1e-010
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 72 1e-010
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 72 1e-010
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 72 1e-010
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 72 1e-010
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 72 1e-010
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 72 1e-010
gb|CN124361.1|CN124361 RHOH1_4_F03.b1_A002 Acid- and alkali... 72 1e-010
gb|CN129214.1|CN129214 RHOH1_34_D09.b3_A002 Acid- and alkal... 72 1e-010
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 72 1e-010
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 72 1e-010
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 72 1e-010
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 72 1e-010
gb|CN143544.1|CN143544 WOUND1_17_A02.b1_A002 Wounded leaves... 72 1e-010
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 72 1e-010
gb|CN145297.1|CN145297 WOUND1_28_C01.b2_A002 Wounded leaves... 72 1e-010
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 72 1e-010
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 72 1e-010
gb|CN149135.1|CN149135 WOUND1_61_A02.b1_A002 Wounded leaves... 72 1e-010
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 72 1e-010
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 72 1e-010
gb|CL150040.1|CL150040 104_331_10778242_114_31355_178 Sorgh... 70 4e-010
gb|CW141973.1|CW141973 104_533_11136596_116_34937_078 Sorgh... 70 4e-010
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 70 4e-010
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 70 4e-010
gb|CW268578.1|CW268578 104_739_11401384_116_35309_058 Sorgh... 70 4e-010
gb|CW365896.1|CW365896 fsbb001f038k07f0 Sorghum methylation... 70 4e-010
gb|BG240513.1|BG240513 OV1_30_H09.b1_A002 Ovary 1 (OV1) Sor... 70 4e-010
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 70 4e-010
gb|BM323139.1|BM323139 PIC1_8_B06.b1_A002 Pathogen-infected... 70 4e-010
gb|BM323592.1|BM323592 PIC1_21_B02.b1_A002 Pathogen-infecte... 70 4e-010
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 70 4e-010
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 70 4e-010
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 70 4e-010
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 70 4e-010
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 70 4e-010
gb|CW137912.1|CW137912 104_525_11119926_116_34877_023 Sorgh... 68 2e-009
gb|CW137913.1|CW137913 104_525_11119926_148_34873_023 Sorgh... 68 2e-009
gb|CD431626.1|CD431626 ETH1_10_F11.b1_A002 Ethylene-treated... 68 2e-009
gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated... 68 2e-009
gb|CL173618.1|CL173618 104_377_10891001_148_31792_137 Sorgh... 66 6e-009
gb|CW024958.1|CW024958 104_226_10487881_116_30524 Sorghum m... 66 6e-009
gb|CW098399.1|CW098399 104_464_11002986_116_34363_065 Sorgh... 66 6e-009
gb|CW098400.1|CW098400 104_464_11002986_148_34367_065 Sorgh... 66 6e-009
gb|CW173032.1|CW173032 104_584_11156623_148_36546_024 Sorgh... 66 6e-009
gb|CW177868.1|CW177868 104_591_11159260_148_36613_010 Sorgh... 66 6e-009
gb|CW226217.1|CW226217 104_664_11204768_148_37221_030 Sorgh... 66 6e-009
gb|CW247719.1|CW247719 104_708_11221917_116_36081_083 Sorgh... 66 6e-009
gb|CW290371.1|CW290371 104_769_11412975_116_35553_054 Sorgh... 66 6e-009
gb|CW301982.1|CW301982 104_786_11464484_116_35663_080 Sorgh... 66 6e-009
gb|CW396435.1|CW396435 fsbb001f084n24f0 Sorghum methylation... 66 6e-009
gb|CW404467.1|CW404467 fsbb001f096j23f0 Sorghum methylation... 66 6e-009
gb|CW496603.1|CW496603 fsbb001f288o23k0 Sorghum methylation... 66 6e-009
gb|AW671936.1|AW671936 LG1_353_D11.b1_A002 Light Grown 1 (L... 66 6e-009
gb|BE358852.1|BE358852 DG1_32_D11.g1_A002 Dark Grown 1 (DG1... 66 6e-009
gb|BG239935.1|BG239935 OV1_30_H09.g1_A002 Ovary 1 (OV1) Sor... 66 6e-009
gb|BM328097.1|BM328097 PIC1_21_B02.g1_A002 Pathogen-infecte... 66 6e-009
gb|CD428024.1|CD428024 ETH1_32_C09.b1_A002 Ethylene-treated... 66 6e-009
gb|CD430662.1|CD430662 ETH1_20_G03.b1_A002 Ethylene-treated... 66 6e-009
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 66 6e-009
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 66 6e-009
gb|CN134563.1|CN134563 OX1_27_D04.b1_A002 Oxidatively-stres... 64 2e-008
gb|CN137074.1|CN137074 OX1_55_B10.b1_A002 Oxidatively-stres... 64 2e-008
gb|CW068471.1|CW068471 104_317_10525139_1_30096 Sorghum met... 62 1e-007
gb|CW124982.1|CW124982 104_505_11112086_116_34716_063 Sorgh... 62 1e-007
gb|CW219164.1|CW219164 104_653_11196585_148_37138_045 Sorgh... 62 1e-007
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 62 1e-007
gb|BF705288.1|BF705288 RHIZ2_3_B07.g1_A003 Rhizome2 (RHIZ2)... 60 4e-007
gb|BM323138.1|BM323138 PIC1_8_B05.b1_A002 Pathogen-infected... 60 4e-007
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 58 1e-006
gb|CL150041.1|CL150041 104_331_10778242_116_31356_178 Sorgh... 58 1e-006
gb|CL175362.1|CL175362 104_380_10892393_116_31767_377 Sorgh... 58 1e-006
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 58 1e-006
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 58 1e-006
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 58 1e-006
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 58 1e-006
gb|CW096875.1|CW096875 104_462_11002137_116_34348_035 Sorgh... 58 1e-006
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 58 1e-006
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 58 1e-006
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 58 1e-006
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 58 1e-006
gb|CW292718.1|CW292718 104_772_11414235_116_35579_002 Sorgh... 58 1e-006
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 58 1e-006
gb|CW421797.1|CW421797 fsbb001f130m08k0 Sorghum methylation... 58 1e-006
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 58 1e-006
gb|BF705022.1|BF705022 RHIZ2_1_D07.g1_A003 Rhizome2 (RHIZ2)... 58 1e-006
gb|CN138525.1|CN138525 OX1_64_G04.b1_A002 Oxidatively-stres... 58 1e-006
gb|CN142345.1|CN142345 WOUND1_9_A01.g1_A002 Wounded leaves ... 58 1e-006
gb|CN149495.1|CN149495 WOUND1_63_D02.b1_A002 Wounded leaves... 58 1e-006
gb|CF675644.1|CF675644 GST3 Subtractive cDNA library from s... 58 1e-006
gb|CX610689.1|CX610689 ANR1_20_F02.b1_A002 Anaerobic roots ... 58 1e-006
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 58 1e-006
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 56 6e-006
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 56 6e-006
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 56 6e-006
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 56 6e-006
gb|CW234700.1|CW234700 104_688_11214165_148_37386_085 Sorgh... 56 6e-006
gb|CW273304.1|CW273304 104_745_11403819_116_35356_004 Sorgh... 56 6e-006
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 56 6e-006
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 56 6e-006
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 56 6e-006
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 56 6e-006
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 56 6e-006
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 56 6e-006
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 56 6e-006
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 56 6e-006
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 56 6e-006
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 54 2e-005
gb|CW184129.1|CW184129 104_600_11164988_116_36688_076 Sorgh... 54 2e-005
gb|CW311030.1|CW311030 104_800_11470021_148_35757_057 Sorgh... 54 2e-005
gb|CW370296.1|CW370296 fsbb001f045c09k0 Sorghum methylation... 54 2e-005
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 54 2e-005
gb|BE355802.1|BE355802 DG1_11_E04.b1_A002 Dark Grown 1 (DG1... 54 2e-005
gb|BE593909.1|BE593909 WS1_103_H02.g1_A002 Water-stressed 1... 54 2e-005
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 54 2e-005
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 54 2e-005
gb|CD232788.1|CD232788 SS1_1_C02.g1_A012 Salt-stressed seed... 54 2e-005
gb|CD429152.1|CD429152 ETH1_2_D06.g1_A002 Ethylene-treated ... 54 2e-005
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 54 2e-005
gb|CX610269.1|CX610269 ANR1_17_D05.g1_A002 Anaerobic roots ... 54 2e-005
gb|CX622414.1|CX622414 GABR1_63_G05.g2_A002 GA- or brassino... 54 2e-005
gb|CW157340.1|CW157340 104_560_11147178_148_36385_069 Sorgh... 52 9e-005
gb|CW365897.1|CW365897 fsbb001f038k07k0 Sorghum methylation... 52 9e-005
gb|CN124218.1|CN124218 RHOH1_3_G12.b1_A002 Acid- and alkali... 52 9e-005
gb|CN125891.1|CN125891 RHOH1_14_A10.b1_A002 Acid- and alkal... 52 9e-005
gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkal... 52 9e-005
gb|CN141484.1|CN141484 OX1_52_A06.b1_A002 Oxidatively-stres... 52 9e-005
gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots ... 52 9e-005
gb|CX622438.1|CX622438 GABR1_64_A06.b2_A002 GA- or brassino... 52 9e-005
gb|BZ345790.1|BZ345790 ht57a10.b1 WGS-SbicolorF (JM107 adap... 50 4e-004
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 50 4e-004
gb|CW155746.1|CW155746 104_558_11146303_148_36368_026 Sorgh... 50 4e-004
gb|CW230586.1|CW230586 104_679_11210644_116_37485_008 Sorgh... 50 4e-004
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 50 4e-004
gb|CW323788.1|CW323788 104_818_11476816_148_35907_062 Sorgh... 50 4e-004
gb|CW338488.1|CW338488 104_838_11484773_116_36122_017 Sorgh... 50 4e-004
gb|CW500124.1|CW500124 fsbb001f295e09k0 Sorghum methylation... 50 4e-004
gb|BE352946.1|BE352946 DG1_1_F08.g1_A002 Dark Grown 1 (DG1)... 50 4e-004
gb|BE359585.1|BE359585 DG1_54_E06.g2_A002 Dark Grown 1 (DG1... 50 4e-004
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 50 4e-004
gb|CD219557.1|CD219557 CCC1_57_E04.g1_A007 Callus culture/c... 50 4e-004
gb|CD229233.1|CD229233 CCC1_13_F08.g1_A007 Callus culture/c... 50 4e-004
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 50 4e-004
gb|CL172252.1|CL172252 104_374_10890016_116_31775_304 Sorgh... 48 0.001
gb|CL175363.1|CL175363 104_380_10892393_148_31766_377 Sorgh... 48 0.001
gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorgh... 48 0.001
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 48 0.001
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 48 0.001
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 48 0.001
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 48 0.001
gb|CW218305.1|CW218305 104_651_11196114_148_37458_065 Sorgh... 48 0.001
gb|CW226216.1|CW226216 104_664_11204768_116_37222_030 Sorgh... 48 0.001
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 48 0.001
gb|BE362928.2|BE362928 DG1_91_A07.b1_A002 Dark Grown 1 (DG1... 48 0.001
gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkali... 48 0.001
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 48 0.001
gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stres... 48 0.001
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 46 0.006
gb|CW036911.1|CW036911 104_268_10504039_114_30381 Sorghum m... 46 0.006
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 46 0.006
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 46 0.006
gb|CW196606.1|CW196606 104_620_11181252_148_36815_038 Sorgh... 46 0.006
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 46 0.006
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 46 0.006
gb|CW285485.1|CW285485 104_762_11410358_116_35504_051 Sorgh... 46 0.006
gb|CW298153.1|CW298153 104_780_11462428_148_35653_006 Sorgh... 46 0.006
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 46 0.006
gb|BE355901.1|BE355901 DG1_11_E04.g1_A002 Dark Grown 1 (DG1... 46 0.006
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 46 0.006
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 46 0.006
gb|BM329425.1|BM329425 PIC1_37_G06.g1_A002 Pathogen-infecte... 46 0.006
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 46 0.006
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 46 0.006
gb|CL187928.1|CL187928 104_404_10901237_114_32442_031 Sorgh... 44 0.023
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 44 0.023
gb|CW218493.1|CW218493 104_652_11196219_148_37491_014 Sorgh... 44 0.023
gb|CW238391.1|CW238391 104_695_11216705_148_37524_075 Sorgh... 44 0.023
gb|CW279626.1|CW279626 104_754_11407179_116_35435_008 Sorgh... 44 0.023
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 44 0.023
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 44 0.023
gb|AW922444.1|AW922444 DG1_19_G02.g1_A002 Dark Grown 1 (DG1... 44 0.023
gb|BG558048.1|BG558048 RHIZ2_66_A02.g1_A003 Rhizome2 (RHIZ2... 44 0.023
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 44 0.023
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 44 0.023
gb|CN129060.1|CN129060 RHOH1_33_F09.b3_A002 Acid- and alkal... 44 0.023
gb|CN142273.1|CN142273 WOUND1_9_A01.b1_A002 Wounded leaves ... 44 0.023
gb|CW032163.1|CW032163 104_261_10501223_115_30364 Sorghum m... 42 0.089
gb|CW035565.1|CW035565 104_266_10503235_114_30376 Sorghum m... 42 0.089
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 42 0.089
gb|CW248190.1|CW248190 104_709_11222168_116_35030_024 Sorgh... 42 0.089
gb|CW252633.1|CW252633 104_715_11224618_148_35091_033 Sorgh... 42 0.089
gb|CW304181.1|CW304181 104_789_11465646_116_35704_031 Sorgh... 42 0.089
gb|CW305810.1|CW305810 104_791_11466505_148_36273_011 Sorgh... 42 0.089
gb|CW345959.1|CW345959 104_849_11488774_116_36216_091 Sorgh... 42 0.089
gb|CW345960.1|CW345960 104_849_11488774_148_36215_091 Sorgh... 42 0.089
gb|CW479679.1|CW479679 fsbb001f238f05k0 Sorghum methylation... 42 0.089
gb|BE598479.1|BE598479 PI1_82_A02.g1_A002 Pathogen induced ... 42 0.089
gb|BE599289.1|BE599289 PI1_87_F09.g1_A002 Pathogen induced ... 42 0.089
gb|BF176663.1|BF176663 EM1_1_E12.g1_A002 Embryo 1 (EM1) Sor... 42 0.089
gb|BG411605.1|BG411605 EM1_58_H08.b1_A002 Embryo 1 (EM1) So... 42 0.089
gb|CD205432.1|CD205432 HS1_14_E04.b1_A012 Heat-shocked seed... 42 0.089
gb|CD219825.1|CD219825 CCC1_59_D11.b1_A007 Callus culture/c... 42 0.089
gb|CD228802.1|CD228802 CCC1_10_H08.b1_A007 Callus culture/c... 42 0.089
gb|CD428784.1|CD428784 ETH1_36_F06.b1_A002 Ethylene-treated... 42 0.089
gb|CD461878.1|CD461878 SA1_31_G11.b1_A002 Salicylic acid-tr... 42 0.089
gb|CD463102.1|CD463102 ETH1_42_D08.b1_A002 Ethylene-treated... 42 0.089
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 42 0.089
gb|CF070892.1|CF070892 FE1_14_B04.b1_A002 Iron-deficient se... 42 0.089
gb|CF770333.1|CF770333 DSBF1_7_D06.b1_A010 Drought-stressed... 42 0.089
gb|CF770416.1|CF770416 DSBF1_7_D06.g1_A010 Drought-stressed... 42 0.089
gb|CN138173.1|CN138173 OX1_62_E02.b1_A002 Oxidatively-stres... 42 0.089
gb|CN138660.1|CN138660 OX1_13_D12.b1_A002 Oxidatively-stres... 42 0.089
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 42 0.089
gb|CX609787.1|CX609787 ANR1_14_F01.g1_A002 Anaerobic roots ... 42 0.089
gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassino... 42 0.089
gb|CW139438.1|CW139438 104_529_11135238_116_34905_021 Sorgh... 40 0.35
gb|CW179719.1|CW179719 104_594_11160249_148_36634_047 Sorgh... 40 0.35
gb|CW190529.1|CW190529 104_612_11174553_116_36753_043 Sorgh... 40 0.35
gb|CW278484.1|CW278484 104_752_11406572_148_35420_066 Sorgh... 40 0.35
gb|CW428571.1|CW428571 fsbb001f141f15f0 Sorghum methylation... 40 0.35
gb|CW456820.1|CW456820 fsbb001f202f15f0 Sorghum methylation... 40 0.35
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 40 0.35
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 40 0.35
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 40 0.35
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BE125495.1|BE125495 DG1_27_A01.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BE360502.1|BE360502 DG1_64_A05.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|BI099142.1|BI099142 IP1_38_C04.g1_A002 Immature pannicle... 40 0.35
gb|BI643620.1|BI643620 DG1_91_G03.b1_A002 Dark Grown 1 (DG1... 40 0.35
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 40 0.35
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 40 0.35
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 40 0.35
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 40 0.35
gb|CN124436.1|CN124436 RHOH1_4_F03.g1_A002 Acid- and alkali... 40 0.35
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 40 0.35
>gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_E02_A002 3', mRNA sequence
Length = 725
Score = 460 bits (232), Expect = e-127
Identities = 385/436 (88%)
Strand = Plus / Plus
Query: 325 cctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtc 384
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 124 cctctcctccccgccgacgcccacgaccgcgccacggctcgcttctgggcagcctacatc 183
Query: 385 gacgacaagttctacaaggagtggaaccggctgttctggtcgacgacggcggagaaggcg 444
||||||||||| | || ||||| | ||||||||||||||||||||||||||||
Sbjct: 184 gacgacaagtttatcctggcgtggaggcagctgttctggtcgacgacggcggagaagata 243
Query: 445 gcggaggcgctcggcgtcgtcgtccccgtggtggagacgctggagcaggcgttcagggag 504
|| |||||| ||| || ||||||||||||| |||||||| |||||| |||||| |||||
Sbjct: 244 gccgaggcgttcgccggcgtcgtccccgtgatggagacgttggagcgagcgttcggggag 303
Query: 505 tgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgcgctc 564
|||||||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 304 tgctccaaggggagacccttcttcggcggcgacgccgtcgggctggtggacatagcgctc 363
Query: 565 gggagcttcgtggtgtggatcagggtggtggacgaggcggccggcgtaaagcttctggac 624
|||||||||||| ||||||| | ||||||| ||||| |||||| || || || ||||||
Sbjct: 364 gggagcttcgtgctgtggatgaaagtggtgggcgaggtggccggtgtgaacctgctggac 423
Query: 625 gaggccaagttcccggccttgacggcgtgggcggagcgcttcttggcggtggacgccgtg 684
|||||||||||||||||| || |||||||||||||||| ||| |||||||||||||||||
Sbjct: 424 gaggccaagttcccggccctggcggcgtgggcggagcggttcctggcggtggacgccgtg 483
Query: 685 aaggaggtgatgccggacgccggaaggctgttggagcactacaaggggtttctggctaaa 744
||||||| ||||||||||||||| ||||| ||||||||||||||| ||||| |||||||
Sbjct: 484 aaggaggcgatgccggacgccgggaggctactggagcactacaaggcgtttcgggctaaa 543
Query: 745 cggtctccacctgctg 760
|| || |||||||||
Sbjct: 544 tgggcttcacctgctg 559
Score = 137 bits (69), Expect = 2e-030
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||| || || |||||||||||||||| |||||||||||
Sbjct: 6 caacccggtgcacaagaaggtgccggtcctcatccacggcggccgcccggtgtgcgagtc 65
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggca 312
|||||||||| ||||||||||||||||||||||||||
Sbjct: 66 gctcgtcatcgtgcagtacgtcgacgagacctgggca 102
>gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_E02_A002 5', mRNA sequence
Length = 490
Score = 280 bits (141), Expect = 2e-073
Identities = 224/253 (88%), Gaps = 9/253 (3%)
Strand = Plus / Plus
Query: 69 aatggcggacggaggcgagctgcagctgctgggctcatggtacagcccctacgtgatccg 128
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 49 aatggcggccggaggcgagctgcagctgctgggctcgtggtacagcccctacgtggtccg 108
Query: 129 cgccaaggtggcgctggggctgaaggggctcagc---------tacgagttcgtcgagga 179
||||||||||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 109 cgccaaggtggcgctggggctcaaggggctcagcagctacgactacgagtacgtcgagga 168
Query: 180 ggacctctcccgcaagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcc 239
|||||||| | ||||||||||||| ||||| | |||||||||||||| |||||||||
Sbjct: 169 ggacctcttcggcaagagcgacctcctgctccggtccaacccggtgcacaagaaggtgcc 228
Query: 240 cgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcga 299
|| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 229 ggtcctcatccacggcggccgcccggtgtgcgagtcgctcgtcatcgtgcagtacgtcga 288
Query: 300 cgagacctgggca 312
|||||||||||||
Sbjct: 289 cgagacctgggca 301
Score = 147 bits (74), Expect = 2e-033
Identities = 143/166 (86%)
Strand = Plus / Plus
Query: 325 cctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtc 384
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 323 cctctcctccccgccgacgcccacgaccgcgccacggctcgcttctgggcagcctacatc 382
Query: 385 gacgacaagttctacaaggagtggaaccggctgttctggtcgacgacggcggagaaggcg 444
|||||||||| | || ||||| | ||||||||||||||||||||||||||||
Sbjct: 383 gacgacaagtatatcctggcgtggaggcagctgttctggtcgacgacggcggagaagata 442
Query: 445 gcggaggcgctcggcgtcgtcgtccccgtggtggagacgctggagc 490
|| |||||| ||| || | ||||||||||| |||||||| ||||||
Sbjct: 443 gccgaggcgatcgccggcatcgtccccgtgatggagacgttggagc 488
>gb|CW144970.1|CW144970 104_537_11138222_116_34973_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138222, DNA
sequence
Length = 663
Score = 206 bits (104), Expect = 3e-051
Identities = 236/280 (84%)
Strand = Plus / Minus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 509 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 450
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 449 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 390
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 389 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 330
Query: 645 gacggcgtgggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgc 704
| |||||||||||||||| ||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 329 ggcggcgtgggcggagcggttcgtggccgtggacgccgtgaagaaggtgacgccggacgc 270
Query: 705 cggaaggctgttggagcactacaaggggtttctggctaaa 744
|| | | | ||||||| ||||||||||||| |||||||
Sbjct: 269 ggggaaggtcctggagcagtacaaggggtttcgggctaaa 230
>gb|CW144971.1|CW144971 104_537_11138222_148_34969_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138222, DNA
sequence
Length = 627
Score = 206 bits (104), Expect = 3e-051
Identities = 236/280 (84%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 171 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 230
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 231 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 290
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 291 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 350
Query: 645 gacggcgtgggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgc 704
| |||||||||||||||| ||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 351 ggcggcgtgggcggagcggttcgtggccgtggacgccgtgaagaaggtgacgccggacgc 410
Query: 705 cggaaggctgttggagcactacaaggggtttctggctaaa 744
|| | | | ||||||| ||||||||||||| |||||||
Sbjct: 411 ggggaaggtcctggagcagtacaaggggtttcgggctaaa 450
>gb|CW301870.1|CW301870 104_785_11464426_116_36263_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464426, DNA
sequence
Length = 662
Score = 206 bits (104), Expect = 3e-051
Identities = 236/280 (84%)
Strand = Plus / Minus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 590 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 531
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 530 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 471
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 470 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 411
Query: 645 gacggcgtgggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgc 704
| |||||||||||||||| ||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 410 ggcggcgtgggcggagcggttcgtggccgtggacgccgtgaagaaggtgacgccggacgc 351
Query: 705 cggaaggctgttggagcactacaaggggtttctggctaaa 744
|| | | | ||||||| ||||||||||||| |||||||
Sbjct: 350 ggggaaggtcctggagcagtacaaggggtttcgggctaaa 311
>gb|AW678260.1|AW678260 WS1_14_C01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 458
Score = 206 bits (104), Expect = 3e-051
Identities = 236/280 (84%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 41 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 100
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 101 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 160
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 161 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 220
Query: 645 gacggcgtgggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgc 704
| |||||||||||||||| ||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 221 ggcggcgtgggcggagcggttcgtggccgtggacgccgtgaagaaggtgacgccggacgc 280
Query: 705 cggaaggctgttggagcactacaaggggtttctggctaaa 744
|| | | | ||||||| ||||||||||||| |||||||
Sbjct: 281 ggggaaggtcctggagcagtacaaggggtttcgggctaaa 320
>gb|AW678342.1|AW678342 WS1_14_C01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 206 bits (104), Expect = 3e-051
Identities = 236/280 (84%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 41 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 100
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 101 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 160
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 161 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 220
Query: 645 gacggcgtgggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgc 704
| |||||||||||||||| ||| |||| ||||||||||||||| |||||| |||||||||
Sbjct: 221 ggcggcgtgggcggagcggttcgtggccgtggacgccgtgaagaaggtgacgccggacgc 280
Query: 705 cggaaggctgttggagcactacaaggggtttctggctaaa 744
|| | | | ||||||| ||||||||||||| |||||||
Sbjct: 281 ggggaaggtcctggagcagtacaaggggtttcgggctaaa 320
>gb|CW141122.1|CW141122 104_532_11136149_148_34928_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136149, DNA
sequence
Length = 616
Score = 178 bits (90), Expect = 6e-043
Identities = 213/254 (83%)
Strand = Plus / Minus
Query: 474 ggtggagacgctggagcaggcgttcagggagtgctccaaagggaaacccttcttcggcgg 533
|||||||||| |||||| ||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 446 ggtggagacgttggagcgggcgttcagggagtgctccaaggggaaggcgttcttcggcgg 387
Query: 534 cgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggatcagggtggt 593
||||||||||||| ||||||||||| ||||||||||| | | | ||||| || | |||
Sbjct: 386 cgacgccgtcgggatcgtggacatcacgctcgggagccacccgatctggatgagagcggt 327
Query: 594 ggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggccttgacggcgtg 653
||||||| |||| ||| || |||||||||| |||||| ||||| | || |||||||
Sbjct: 326 ggacgagacggcaggcaccaaccttctggacggggccaaattcccttgcctggcggcgtg 267
Query: 654 ggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgccggaaggct 713
||||||||| ||| |||| |||||||||||||| |||| ||||||||||||| | |||
Sbjct: 266 ggcggagcggttcatggccgtggacgccgtgaacagggtggtgccggacgccgggaagct 207
Query: 714 gttggagcactaca 727
|||||||| ||||
Sbjct: 206 tttggagcagtaca 193
>gb|CW467394.1|CW467394 fsbb001f219b03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219b03, DNA
sequence
Length = 599
Score = 170 bits (86), Expect = 1e-040
Identities = 197/234 (84%)
Strand = Plus / Minus
Query: 474 ggtggagacgctggagcaggcgttcagggagtgctccaaagggaaacccttcttcggcgg 533
|||||||||| |||||| ||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 272 ggtggagacgttggagcgggcgttcagggagtgctccaaggggaaggcgttcttcggcgg 213
Query: 534 cgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggatcagggtggt 593
||||||||||||| ||||||||||| ||||||||||| | | | ||||| || | |||
Sbjct: 212 cgacgccgtcgggatcgtggacatcacgctcgggagccacccgatctggatgagagcggt 153
Query: 594 ggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggccttgacggcgtg 653
||||||| |||| ||| || |||||||||| |||||| ||||| | || |||||||
Sbjct: 152 ggacgagacggcaggcaccaaccttctggacggggccaaattcccttgcctggcggcgtg 93
Query: 654 ggcggagcgcttcttggcggtggacgccgtgaaggaggtgatgccggacgccgg 707
||||||||| ||| |||| |||||||||||||| |||| |||||||||||||
Sbjct: 92 ggcggagcggttcatggccgtggacgccgtgaacagggtggtgccggacgccgg 39
Score = 125 bits (63), Expect = 8e-027
Identities = 123/143 (86%)
Strand = Plus / Minus
Query: 251 acggcggccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctggg 310
||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||| ||||
Sbjct: 577 acggcggccgcccggtgtgcgagtctctcgtgatcctgcagtacatcgacgagatctggc 518
Query: 311 caggcaccgggacccctctcctccccgccgacgcctacgaccgcgccatggctcgcttct 370
|| ||||| | || |||||||| |||||| ||||||||||||||| ||| || ||||
Sbjct: 517 gggggaccggtcctccgctcctcccagccgacccctacgaccgcgccacggcacggttct 458
Query: 371 gggcagcctacgtcgacgacaag 393
|||| |||| |||||||||||||
Sbjct: 457 gggcggccttcgtcgacgacaag 435
>gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136149, DNA
sequence
Length = 564
Score = 163 bits (82), Expect = 4e-038
Identities = 214/258 (82%)
Strand = Plus / Plus
Query: 136 gtggcgctggggctgaaggggctcagctacgagttcgtcgaggaggacctctcccgcaag 195
||||||||||| || | ||| || |||||||||| | |||||||||||||| | ||||
Sbjct: 140 gtggcgctgggactcaggggcctgagctacgagtacatcgaggaggacctcggcaacaag 199
Query: 196 agcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtccacggc 255
||||| || ||||| | |||||||||||||| ||||||||| || || || |||||
Sbjct: 200 agcgatctcctgctccggtccaacccggtgcacaagaaggtgccggtcctcatcgacggc 259
Query: 256 ggccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggc 315
|||||||| ||||||||||| ||||| |||||||||||| ||||||||| |||| ||
Sbjct: 260 ggccgcccggtgtgcgagtctctcgtgatcctgcagtacatcgacgagatctggcggggg 319
Query: 316 accgggacccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggca 375
||||| | || |||||||| |||||| ||||||||||||||| ||| || ||||||||
Sbjct: 320 accggtcctccgctcctcccagccgacccctacgaccgcgccacggcacggttctgggcg 379
Query: 376 gcctacgtcgacgacaag 393
|||| |||||||||||||
Sbjct: 380 gccttcgtcgacgacaag 397
>gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219b03, DNA
sequence
Length = 603
Score = 163 bits (82), Expect = 4e-038
Identities = 214/258 (82%)
Strand = Plus / Plus
Query: 136 gtggcgctggggctgaaggggctcagctacgagttcgtcgaggaggacctctcccgcaag 195
||||||||||| || | ||| || |||||||||| | |||||||||||||| | ||||
Sbjct: 309 gtggcgctgggactcaggggcctgagctacgagtacatcgaggaggacctcggcaacaag 368
Query: 196 agcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtccacggc 255
||||| || ||||| | |||||||||||||| ||||||||| || || || |||||
Sbjct: 369 agcgatctcctgctccggtccaacccggtgcacaagaaggtgccggtcctcatcgacggc 428
Query: 256 ggccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggc 315
|||||||| ||||||||||| ||||| |||||||||||| ||||||||| |||| ||
Sbjct: 429 ggccgcccggtgtgcgagtctctcgtgatcctgcagtacatcgacgagatctggcggggg 488
Query: 316 accgggacccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggca 375
||||| | || |||||||| |||||| ||||||||||||||| ||| || ||||||||
Sbjct: 489 accggtcctccgctcctcccagccgacccctacgaccgcgccacggcacggttctgggcg 548
Query: 376 gcctacgtcgacgacaag 393
|||| |||||||||||||
Sbjct: 549 gccttcgtcgacgacaag 566
>gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464426, DNA
sequence
Length = 712
Score = 155 bits (78), Expect = 9e-036
Identities = 186/222 (83%)
Strand = Plus / Plus
Query: 82 ggcgagctgcagctgctgggctcatggtacagcccctacgtgatccgcgccaaggtggcg 141
|||||||||| ||||||||| |||||| ||||| | |||||||| | | |||||||
Sbjct: 26 ggcgagctgctcctgctgggcacatggtcgagcccatgggtgatccgagtgagggtggcg 85
Query: 142 ctggggctgaaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgac 201
|||||||| ||||| || |||||||| | | |||||||||||||| || ||||||||||
Sbjct: 86 ctggggctcaagggcctgagctacgactacctcgaggaggacctcgccaacaagagcgac 145
Query: 202 ctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcggccgc 261
|| ||||| | |||||||||||||| ||||||||| || || ||||||||||||||
Sbjct: 146 ctcctgctccggtccaacccggtgcacaagaaggtgccggtcctcatccacggcggccgc 205
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
|| ||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 206 ccggtgcgcgagtcgctcgtgatcctgcagtacctcgacgag 247
Score = 105 bits (53), Expect = 7e-021
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 537 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 596
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
||||||||||||||||||| || ||||||||||||||||||||||| | || | |||||
Sbjct: 597 cttcggcggcgacgccgtcnggatcgtggacatcgcgctcgggagccacctgatttggat 656
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccgg 640
||| ||||| ||||| | || ||| | |||||||||| ||||||||||||||
Sbjct: 657 cagagtggtagacgaagtgggaggcaccgaccttctggacggggccaagttcccgg 712
Score = 75.8 bits (38), Expect = 6e-012
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
|||||||| |||||| ||||||||||||||| ||| || |||||||| ||||||||| ||
Sbjct: 278 ctcctcccagccgacccctacgaccgcgccacggcacggttctgggcggcctacgtcaac 337
Query: 388 gacaag 393
||||||
Sbjct: 338 gacaag 343
>gb|AW679039.1|AW679039 WS1_22_H01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 237
Score = 145 bits (73), Expect = 8e-033
Identities = 166/197 (84%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 41 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 100
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagcttcgtggtgtggat 584
|||||||||||||||||||||| ||||||||||||||||||||||| | || | |||||
Sbjct: 101 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagccacctgatttggat 160
Query: 585 cagggtggtggacgaggcggccggcgtaaagcttctggacgaggccaagttcccggcctt 644
||| ||||| ||||||| || ||| | |||||||||| |||||||||||||| |||
Sbjct: 161 cagagtggtagacgaggtgggaggcaccgaccttctggacggggccaagttcccgggctt 220
Query: 645 gacggcgtgggcggagc 661
| |||||||||||||||
Sbjct: 221 ggcggcgtgggcggagc 237
>gb|AW679107.1|AW679107 WS1_22_H01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 428
Score = 115 bits (58), Expect = 7e-024
Identities = 103/118 (87%)
Strand = Plus / Plus
Query: 627 ggccaagttcccggccttgacggcgtgggcggagcgcttcttggcggtggacgccgtgaa 686
|||||||||||||| |||| |||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 155 ggccaagttcccgggcttggcggcgtgggcggagcggttcgtggccgtggacgccgtgaa 214
Query: 687 ggaggtgatgccggacgccggaaggctgttggagcactacaaggggtttctggctaaa 744
| |||||| ||||||||| || | | | ||||||| ||||||||||||| |||||||
Sbjct: 215 gaaggtgacgccggacgcggggaaggtcctggagcagtacaaggggtttcgggctaaa 272
Score = 107 bits (54), Expect = 2e-021
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 465 cgtccccgtggtggagacgctggagcaggcgttcagggagtgctccaaagggaaaccctt 524
|||||| | |||||||||| |||| | ||||||| ||||||||||| ||||| | ||
Sbjct: 22 cgtccctgcggtggagacgttggaacgggcgttcgcggagtgctccagggggaaggcgtt 81
Query: 525 cttcggcggcgacgccgtcgggctcgtggacatcgcgctcgggagc 570
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 82 cttcggcggcgacgccgtcgggatcgtggacatcgcgctcgggagc 127
>gb|CW137234.1|CW137234 104_523_11119182_148_34867_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11119182, DNA
sequence
Length = 667
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 238 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 179
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 178 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 124
>gb|AW677154.1|AW677154 DG1_5_C08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 497
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 187 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 246
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 247 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 301
>gb|AW923329.1|AW923329 DG1_51_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 182 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 241
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 242 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 296
>gb|BE361727.1|BE361727 DG1_82_F09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 494
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 187 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 246
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 247 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 301
>gb|BE363072.1|BE363072 DG1_9_F01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 190 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 249
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 250 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 304
>gb|BG557805.1|BG557805 EM1_53_E01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 309
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 182 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 241
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 242 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 296
>gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_44_B03_A002 5', mRNA sequence
Length = 586
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 202 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 261
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 262 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 316
>gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_G02_A002 5', mRNA sequence
Length = 748
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 176 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 235
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 236 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 290
>gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_H08_A002 5', mRNA sequence
Length = 626
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 173 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 232
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 233 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 287
>gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_F04_A002 5', mRNA sequence
Length = 718
Score = 97.6 bits (49), Expect = 2e-018
Identities = 99/115 (86%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 192 caagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcca 251
||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||| ||||
Sbjct: 176 caagagcgagctgctgctgcaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 235
Query: 252 cggcg---gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||| |||| |||||||||||||||||| | ||||||||||||||
Sbjct: 236 cggcgaccgccgcgccgtctgcgagtcgctcgtcatcgtcgagtacgtcgacgag 290
>gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949088, DNA
sequence
Length = 671
Score = 85.7 bits (43), Expect = 7e-015
Identities = 147/181 (81%), Gaps = 3/181 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||| ||||||| | || | |||||||| |||||||||| || || || ||||||||
Sbjct: 273 caaccccgtgcacaagcagatccccgtgctcctccacggcgggcggccggtctgcgagtc 332
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctc---tcct 332
|||||||||| ||||||||||||||||| ||| | ||| ||| ||||| | ||||
Sbjct: 333 gctcgtcatcttgcagtacgtcgacgaggccttctccggcgccgccaccccgcggatcct 392
Query: 333 ccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaa 392
|||||||||| |||||||||||||| | ||||||||||| | ||||| ||||| |||
Sbjct: 393 ccccgccgacccctacgaccgcgccgtccaccgcttctgggccgactacgccgacgccaa 452
Query: 393 g 393
|
Sbjct: 453 g 453
>gb|CW090102.1|CW090102 104_435_10949088_116_32599_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949088, DNA
sequence
Length = 686
Score = 85.7 bits (43), Expect = 7e-015
Identities = 147/181 (81%), Gaps = 3/181 (1%)
Strand = Plus / Minus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||| ||||||| | || | |||||||| |||||||||| || || || ||||||||
Sbjct: 661 caaccccgtgcacaagcagatccccgtgctcctccacggcgggcggccggtctgcgagtc 602
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctc---tcct 332
|||||||||| ||||||||||||||||| ||| | ||| ||| ||||| | ||||
Sbjct: 601 gctcgtcatcttgcagtacgtcgacgaggccttctccggcgccgccaccccgcggatcct 542
Query: 333 ccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaa 392
|||||||||| |||||||||||||| | ||||||||||| | ||||| ||||| |||
Sbjct: 541 ccccgccgacccctacgaccgcgccgtccaccgcttctgggccgactacgccgacgccaa 482
Query: 393 g 393
|
Sbjct: 481 g 481
>gb|CW256509.1|CW256509 104_721_11226831_148_35142_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226831, DNA
sequence
Length = 343
Score = 79.8 bits (40), Expect = 4e-013
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggca 375
||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 275 ctcctccccgccgacccctacgaccgcgccatggcacgcttctgggca 228
Score = 42.1 bits (21), Expect = 0.089
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 271 gagtcgctcgtcatcctgcagtacgtcgacgag 303
||||| ||||||||| || ||||||||||||||
Sbjct: 326 gagtccctcgtcatcgtggagtacgtcgacgag 294
>gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464593, DNA
sequence
Length = 606
Score = 79.8 bits (40), Expect = 4e-013
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggca 375
||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 497 ctcctccccgccgacccctacgaccgcgccatggcacgcttctgggca 450
Score = 60.0 bits (30), Expect = 4e-007
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 226 cacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatc 285
|||| ||||||||||||||| | |||||| |||| | || |||||||| |||||||||
Sbjct: 593 cacaagaaggtgcccgtgctcctgcacggccaccgcgctgtctgcgagtccctcgtcatc 534
Query: 286 ctgcagtacgtcgacgag 303
|| ||||||||||||||
Sbjct: 533 gtggagtacgtcgacgag 516
>gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f283e08, DNA
sequence
Length = 625
Score = 79.8 bits (40), Expect = 4e-013
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggca 375
||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 470 ctcctccccgccgacccctacgaccgcgccatggcacgcttctgggca 423
Score = 60.0 bits (30), Expect = 4e-007
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 226 cacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatc 285
|||| ||||||||||||||| | |||||| |||| | || |||||||| |||||||||
Sbjct: 566 cacaagaaggtgcccgtgctcctgcacggccaccgcgctgtctgcgagtccctcgtcatc 507
Query: 286 ctgcagtacgtcgacgag 303
|| ||||||||||||||
Sbjct: 506 gtggagtacgtcgacgag 489
>gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 440
Score = 79.8 bits (40), Expect = 4e-013
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 151 aaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctg 210
||||| ||||||||||||| ||||||||| |||||| | ||||||||| || || ||
Sbjct: 77 aagggcctcagctacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctc 136
Query: 211 aagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcggc 258
||| |||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 137 aagtccaacccggtgcacaagaaggtgcccgtgctcatccacgacggc 184
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||||||| |||||| |||||||| || ||||||||||| |||| ||||||||
Sbjct: 255 tcctccccgccgacccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacg 314
Query: 389 acaag 393
|||||
Sbjct: 315 acaag 319
>gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 508
Score = 79.8 bits (40), Expect = 4e-013
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 151 aaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctg 210
||||| ||||||||||||| ||||||||| |||||| | ||||||||| || || ||
Sbjct: 77 aagggcctcagctacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctc 136
Query: 211 aagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcggc 258
||| |||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 137 aagtccaacccggtgcacaagaaggtgcccgtgctcatccacgacggc 184
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||||||| |||||| |||||||| || ||||||||||| |||| ||||||||
Sbjct: 255 tcctccccgccgacccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacg 314
Query: 389 acaag 393
|||||
Sbjct: 315 acaag 319
>gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_F04_A007 5', mRNA sequence
Length = 503
Score = 79.8 bits (40), Expect = 4e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||| |||| |||| | ||||||||| |||||| |||||||||||| ||||||||
Sbjct: 216 caacccggtccacaagaagatccccgtgctgctccacgacggccgccccgtctgcgagtc 275
Query: 276 gctcgtcatcctgcagtacgtcgacgag 303
||| ||||| |||||||| | ||||||
Sbjct: 276 cctcatcatcgtgcagtacctggacgag 303
>gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153917, DNA
sequence
Length = 635
Score = 77.8 bits (39), Expect = 2e-012
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 165 cgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggt 224
||||| ||||||||||||||| | |||||| || || ||||| ||| |||||||||
Sbjct: 237 cgagtacgtcgaggaggacctgaacaacaagagtgagctcctgctcaagtccaacccggt 296
Query: 225 gcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcat 284
||||| ||||||||||||||| ||||| ||| ||| | || ||||| ||||||||
Sbjct: 297 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgtgagtcactcgtcat 356
Query: 285 cctgcagtacgtcgacgag 303
|||||||||||||||||||
Sbjct: 357 cctgcagtacgtcgacgag 375
Score = 65.9 bits (33), Expect = 6e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 337 gccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| ||| ||| ||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 403 gccgaccccttcgagcgcgccactgctcgcttctgggctgcctacgtcgacgacaag 459
>gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204056, DNA
sequence
Length = 716
Score = 77.8 bits (39), Expect = 2e-012
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 165 cgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggt 224
||||| ||||||||||||||| | |||||| || || ||||| ||| |||||||||
Sbjct: 454 cgagtacgtcgaggaggacctgaacaacaagagtgagctcctgctcaagtccaacccggt 513
Query: 225 gcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcat 284
||||| ||||||||||||||| ||||| ||| ||| | || ||||| ||||||||
Sbjct: 514 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgtgagtcactcgtcat 573
Query: 285 cctgcagtacgtcgacgag 303
|||||||||||||||||||
Sbjct: 574 cctgcagtacgtcgacgag 592
Score = 65.9 bits (33), Expect = 6e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 337 gccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| ||| ||| ||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 620 gccgaccccttcgagcgcgccactgctcgcttctgggctgcctacgtcgacgacaag 676
>gb|CW259602.1|CW259602 104_726_11228516_116_35191_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228516, DNA
sequence
Length = 629
Score = 77.8 bits (39), Expect = 2e-012
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 501 ggagtgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgc 560
||||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 416 ggagtgctctaatgggagacccttcttcggcggcgacagcgtcgggtacgtggacatcgc 475
Query: 561 gctcgggagcttcgt 575
|||||| |||||||
Sbjct: 476 gctcggaggcttcgt 490
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 326 ctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcg 385
|||||||||||| |||| |||||||||| || |||||||||| |||||||||||| | |
Sbjct: 168 ctctcctccccgtcgacccctacgaccgtgctgtggctcgcttttgggcagcctacattg 227
Query: 386 acgacaag 393
||||||||
Sbjct: 228 acgacaag 235
>gb|CW401979.1|CW401979 fsbb001f093b04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f093b04, DNA
sequence
Length = 664
Score = 77.8 bits (39), Expect = 2e-012
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 501 ggagtgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgc 560
||||||||| || |||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 179 ggagtgctctaatgggagacccttcttcggcggcgacagcgtcgggtacgtggacatcgc 238
Query: 561 gctcgggagcttcgt 575
|||||| |||||||
Sbjct: 239 gctcggaggcttcgt 253
>gb|AW676810.1|AW676810 DG1_1_F08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 411
Score = 77.8 bits (39), Expect = 2e-012
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||| ||| ||||| | |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 308 tccttccctccgacccatacgaccgcgccattgctcgcttctgggcctcctacgtcgacg 367
Query: 389 acaagtt 395
|||||||
Sbjct: 368 acaagtt 374
>gb|AW676903.1|AW676903 DG1_2_H05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 412
Score = 77.8 bits (39), Expect = 2e-012
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||| ||| ||||| | |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 308 tccttccctccgacccatacgaccgcgccattgctcgcttctgggcctcctacgtcgacg 367
Query: 389 acaagtt 395
|||||||
Sbjct: 368 acaagtt 374
>gb|AW676991.1|AW676991 DG1_3_D10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 449
Score = 77.8 bits (39), Expect = 2e-012
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 217 aacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcg 276
|||||||| |||| |||| | |||||||| |||||| |||||||||||| ||||||||
Sbjct: 235 aacccggtccacaagaagatccccgtgctcctccacgacggccgccccgtctgcgagtcc 294
Query: 277 ctcgtcatcctgcagtacgtcgacgag 303
||| ||||| |||||||| ||||||||
Sbjct: 295 ctcctcatcgtgcagtacctcgacgag 321
>gb|BE358620.1|BE358620 DG1_30_F09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 77.8 bits (39), Expect = 2e-012
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 217 aacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcg 276
|||||||| |||| |||| | |||||||| |||||| |||||||||||| ||||||||
Sbjct: 241 aacccggtccacaagaagatccccgtgctcctccacgacggccgccccgtctgcgagtcc 300
Query: 277 ctcgtcatcctgcagtacgtcgacgag 303
||| ||||| |||||||| ||||||||
Sbjct: 301 ctcctcatcgtgcagtacctcgacgag 327
>gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 5', mRNA sequence
Length = 598
Score = 77.8 bits (39), Expect = 2e-012
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 165 cgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggt 224
||||| ||||||||||||||| | |||||| || || ||||| ||| |||||||||
Sbjct: 174 cgagtacgtcgaggaggacctgaacaacaagagtgagctcctgctcaagtccaacccggt 233
Query: 225 gcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcat 284
||||| ||||||||||||||| ||||| ||| ||| | || ||||| ||||||||
Sbjct: 234 gcacaagaaggtgcccgtgctcatccacaacggtaagcccatctgtgagtcactcgtcat 293
Query: 285 cctgcagtacgtcgacgag 303
|||||||||||||||||||
Sbjct: 294 cctgcagtacgtcgacgag 312
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 337 gccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaagtt 395
|||||| ||| ||| ||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 340 gccgaccccttcgagcgcgccactgctcgcttctgggctgcctacgtcgacgacaagtt 398
>gb|CW161660.1|CW161660 104_568_11150530_148_36435_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150530, DNA
sequence
Length = 707
Score = 75.8 bits (38), Expect = 6e-012
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccggg 321
||||| |||||||||| ||||||||||| ||| |||||||| ||| || ||||||||
Sbjct: 232 cccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggcctttgccggcaccggc 173
Query: 322 acccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctac 381
| | |||||||| |||||| ||||| | |||||| | |||||||||||||| ||||||
Sbjct: 172 ccgtccctcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 113
Query: 382 gtcgacgaca 391
|||| ||||
Sbjct: 112 atcgatgaca 103
>gb|BE355015.1|BE355015 DG1_10_E05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 452
Score = 75.8 bits (38), Expect = 6e-012
Identities = 107/130 (82%)
Strand = Plus / Plus
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccggg 321
||||| |||||||||| ||||||||||| ||| |||||||| ||| || ||||||||
Sbjct: 238 cccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggcctttgccggcaccggc 297
Query: 322 acccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctac 381
| | |||||||| |||||| ||||| | |||||| | |||||||||||||| ||||||
Sbjct: 298 ccgtccctcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 357
Query: 382 gtcgacgaca 391
|||| ||||
Sbjct: 358 atcgatgaca 367
>gb|BE355164.1|BE355164 DG1_10_E05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 75.8 bits (38), Expect = 6e-012
Identities = 107/130 (82%)
Strand = Plus / Plus
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccggg 321
||||| |||||||||| ||||||||||| ||| |||||||| ||| || ||||||||
Sbjct: 108 cccgtctgcgagtcgcgggtcatcctgcaatacatcgacgaggcctttgccggcaccggc 167
Query: 322 acccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctac 381
| | |||||||| |||||| ||||| | |||||| | |||||||||||||| ||||||
Sbjct: 168 ccgtccctcctccctgccgacccctaccaacgcgccgttgctcgcttctgggccgcctac 227
Query: 382 gtcgacgaca 391
|||| ||||
Sbjct: 228 atcgatgaca 237
Score = 40.1 bits (20), Expect = 0.35
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 510 caaagggaaacccttcttcggcggcgac 537
||||||||| ||||||||||| ||||||
Sbjct: 356 caaagggaagcccttcttcggtggcgac 383
>gb|CW161070.1|CW161070 104_567_11150217_148_36416_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150217, DNA
sequence
Length = 706
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||||||| |||||| |||||||| || ||||||||||| |||| ||||||||
Sbjct: 631 tcctccccgccgacccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacg 572
Query: 389 acaag 393
|||||
Sbjct: 571 acaag 567
Score = 46.1 bits (23), Expect = 0.006
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 525 cttcggcggcgacgccgtcgggctcgtggac 555
|||||||||||||| ||||||| ||||||||
Sbjct: 429 cttcggcggcgacggcgtcgggttcgtggac 399
>gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204738, DNA
sequence
Length = 647
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||||||| |||||| |||||||| || ||||||||||| |||| ||||||||
Sbjct: 164 tcctccccgccgacccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacg 105
Query: 389 acaag 393
|||||
Sbjct: 104 acaag 100
Score = 71.9 bits (36), Expect = 1e-010
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 151 aaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctg 210
||||| ||||||||||||| ||||||||| |||||| | ||||||||| || || ||
Sbjct: 342 aagggcctcagctacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctc 283
Query: 211 aagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcggc 258
|| |||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 282 cagtccaacccggtgcacaagaaggtgcccgtgctcatccacgacggc 235
>gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462428, DNA
sequence
Length = 609
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||||||| |||||| |||||||| || ||||||||||| |||| ||||||||
Sbjct: 267 tcctccccgccgacccctacggccgcgccaccgcccgcttctgggccgccttcgtcgacg 326
Query: 389 acaag 393
|||||
Sbjct: 327 acaag 331
Score = 71.9 bits (36), Expect = 1e-010
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 151 aaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctg 210
||||| ||||||||||||| ||||||||| |||||| | ||||||||| || || ||
Sbjct: 89 aagggcctcagctacgagtacgtcgaggaagacctcctcaacaagagcgagctccttctc 148
Query: 211 aagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcggc 258
|| |||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 149 cagtccaacccggtgcacaagaaggtgcccgtgctcatccacgacggc 196
Score = 46.1 bits (23), Expect = 0.006
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 525 cttcggcggcgacgccgtcgggctcgtggac 555
|||||||||||||| ||||||| ||||||||
Sbjct: 469 cttcggcggcgacggcgtcgggttcgtggac 499
>gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_B06_A002 5', mRNA sequence
Length = 760
Score = 73.8 bits (37), Expect = 3e-011
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 137 tggcgctggggctgaaggggctcagctacgagttcgtcgaggaggacctctcccgcaaga 196
||||||||| |||||||| || |||||||||| ||||||| ||||||| | || |||||
Sbjct: 125 tggcgctggacctgaagggcctgagctacgagtacgtcgagcaggacctgttccacaaga 184
Query: 197 gcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtccacggcg 256
||||||| || || | |||||| ||||||| |||||| |||||||| ||||| ||
Sbjct: 185 gcgacctcctcctcacctccaaccccgtgcacaagaaggtccccgtgctcatccacaacg 244
Query: 257 gccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgg 309
|| ||| | |||||||| |||||| ||||| ||||| |||| ||| |||||
Sbjct: 245 gcaagcccatctgcgagtctctcgtcgtcctggagtacctcgaagaggcctgg 297
Score = 65.9 bits (33), Expect = 6e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 329 tcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||||||||| ||| |||||| ||||||| | |||||||||||||| |||||| ||||||
Sbjct: 332 tcctccccgctgacccctacggccgcgccgtcgctcgcttctgggccgcctacatcgacg 391
Query: 389 acaag 393
||||
Sbjct: 392 gcaag 396
Score = 44.1 bits (22), Expect = 0.023
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 522 cttcttcggcggcgacgccgtcgggctcgtggacatcgcgctcggg 567
|||||||||||||||| |||| ||| | ||||| |||||||||||
Sbjct: 555 cttcttcggcggcgactccgttgggtacctggacctcgcgctcggg 600
>gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih48b09 5', DNA sequence
Length = 785
Score = 71.9 bits (36), Expect = 1e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccggg 321
||||| || ||||||| ||||||||||||||| ||||||| | | || ||||||||
Sbjct: 614 cccgtctgtgagtcgcaggtcatcctgcagtacatcgacgaagctttcgccggcaccggc 555
Query: 322 acccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctac 381
| | |||||||| || ||| ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 554 ccgtccctcctccctgctgacccctacgaacgcgccatcgctcgcttctgggccgcctac 495
Query: 382 gtcgacgacaag 393
|||| ||||||
Sbjct: 494 atcgatgacaag 483
Score = 65.9 bits (33), Expect = 6e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 510 caaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgcgctcgg 566
||||||||| |||||||||||||||||| ||||||| |||||||| ||| ||||||
Sbjct: 223 caaagggaagcccttcttcggcggcgacagcgtcgggttcgtggacgtcgtgctcgg 167
>gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894905, DNA
sequence
Length = 642
Score = 71.9 bits (36), Expect = 1e-010
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||| |||| |||| | |||||||| |||||| |||||||||||| ||||||||
Sbjct: 467 caacccggtccacaagaagatccccgtgctcctccacgacggccgccccgtctgcgagtc 526
Query: 276 gctcgtcatcctgcagtacgtcgacgag 303
||| ||||| |||||||| | ||||||
Sbjct: 527 cctcatcatcgtgcagtacctggacgag 554
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 341,257
Number of Sequences: 832831
Number of extensions: 341257
Number of successful extensions: 108492
Number of sequences better than 0.5: 297
Number of HSP's better than 0.5 without gapping: 295
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 107685
Number of HSP's gapped (non-prelim): 765
length of query: 917
length of database: 491,359,669
effective HSP length: 20
effective length of query: 897
effective length of database: 474,703,049
effective search space: 425808634953
effective search space used: 425808634953
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)