BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738978.2.1
(572 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL151515.1|CL151515 104_334_10779308_114_31361_092 Sorgh... 248 5e-064
gb|CW070295.1|CW070295 104_321_10526663_5_30098 Sorghum met... 248 5e-064
gb|AW677822.1|AW677822 WS1_11_B01.b1_A002 Water-stressed 1 ... 248 5e-064
gb|AW677829.1|AW677829 WS1_11_B01.g1_A002 Water-stressed 1 ... 248 5e-064
gb|AW680582.1|AW680582 WS1_6_A02.b1_A002 Water-stressed 1 (... 248 5e-064
gb|AW746483.1|AW746483 WS1_53_B06.b1_A002 Water-stressed 1 ... 248 5e-064
gb|AW747692.1|AW747692 WS1_75_D09.g1_A002 Water-stressed 1 ... 248 5e-064
gb|AW924425.1|AW924425 WS1_69_C03.b1_A002 Water-stressed 1 ... 248 5e-064
gb|AW924687.1|AW924687 WS1_71_B09.b1_A002 Water-stressed 1 ... 248 5e-064
gb|AW924779.1|AW924779 WS1_72_B09.b1_A002 Water-stressed 1 ... 248 5e-064
gb|AW925002.1|AW925002 WS1_74_B09.b1_A002 Water-stressed 1 ... 248 5e-064
gb|BE363712.1|BE363712 WS1_69_C03.g2_A002 Water-stressed 1 ... 248 5e-064
gb|BE363792.1|BE363792 WS1_71_B09.g2_A002 Water-stressed 1 ... 248 5e-064
gb|BE593752.1|BE593752 WS1_101_G05.g1_A002 Water-stressed 1... 248 5e-064
gb|BE594064.1|BE594064 WS1_101_G05.b1_A002 Water-stressed 1... 248 5e-064
gb|CD230418.1|CD230418 SS1_43_A12.g1_A012 Salt-stressed see... 248 5e-064
gb|CD423396.1|CD423396 SA1_23_F06.b1_A002 Salicylic acid-tr... 248 5e-064
gb|CD423506.1|CD423506 SA1_23_F06.g1_A002 Salicylic acid-tr... 248 5e-064
gb|CD424643.1|CD424643 SA1_8_C08.g1_A002 Salicylic acid-tre... 248 5e-064
gb|CD425487.1|CD425487 SA1_12_G10.g1_A002 Salicylic acid-tr... 248 5e-064
gb|CD426603.1|CD426603 SA1_21_C03.g1_A002 Salicylic acid-tr... 248 5e-064
gb|CD426879.1|CD426879 SA1_25_B01.g1_A002 Salicylic acid-tr... 248 5e-064
gb|CD427661.1|CD427661 SA1_37_F08.g1_A002 Salicylic acid-tr... 248 5e-064
gb|CD461851.1|CD461851 SA1_31_E11.b1_A002 Salicylic acid-tr... 248 5e-064
gb|CF758170.1|CF758170 DSAF1_28_D01.g1_A011 Drought-stresse... 248 5e-064
gb|CN139123.1|CN139123 OX1_16_D03.b1_A002 Oxidatively-stres... 248 5e-064
gb|CN146416.1|CN146416 WOUND1_41_C07.b1_A002 Wounded leaves... 248 5e-064
gb|CN146495.1|CN146495 WOUND1_41_C07.g1_A002 Wounded leaves... 248 5e-064
gb|AW680424.1|AW680424 WS1_52_H06.g1_A002 Water-stressed 1 ... 242 3e-062
gb|AW747613.1|AW747613 WS1_74_B09.g1_A002 Water-stressed 1 ... 242 3e-062
gb|CD425419.1|CD425419 SA1_12_G10.b1_A002 Salicylic acid-tr... 242 3e-062
gb|CD428429.1|CD428429 ETH1_31_A06.g1_A002 Ethylene-treated... 240 1e-061
gb|CN139195.1|CN139195 OX1_16_D03.g1_A002 Oxidatively-stres... 240 1e-061
gb|AW680743.1|AW680743 WS1_6_A02.g1_A002 Water-stressed 1 (... 234 7e-060
gb|CD423088.1|CD423088 SA1_27_F02.b1_A002 Salicylic acid-tr... 232 3e-059
gb|CD423201.1|CD423201 SA1_27_F02.g1_A002 Salicylic acid-tr... 232 3e-059
gb|AW677892.1|AW677892 WS1_11_C03.g1_A002 Water-stressed 1 ... 226 2e-057
gb|AW746539.1|AW746539 WS1_53_B06.g1_A002 Water-stressed 1 ... 220 1e-055
gb|AW924891.1|AW924891 WS1_72_B09.g1_A002 Water-stressed 1 ... 218 4e-055
gb|AW924293.1|AW924293 WS1_52_H06.b1_A002 Water-stressed 1 ... 196 2e-048
gb|DN552725.1|DN552725 pSHR-RT-MR-H2_H04_C018 pSHR Sorghum ... 188 4e-046
gb|CD427504.1|CD427504 SA1_37_F08.b1_A002 Salicylic acid-tr... 182 2e-044
gb|AW679436.1|AW679436 WS1_24_F03.g1_A002 Water-stressed 1 ... 157 1e-036
gb|CL151516.1|CL151516 104_334_10779308_116_31362_092 Sorgh... 131 8e-029
gb|AW679337.1|AW679337 WS1_24_F03.b1_A002 Water-stressed 1 ... 70 2e-010
gb|BQ656026.1|BQ656026 pRC0309 Sorghum halepense rhizome cD... 46 0.004
gb|CL168869.1|CL168869 104_367_10812205_148_31786_061 Sorgh... 42 0.055
gb|CW334170.1|CW334170 104_832_11482355_148_36052_040 Sorgh... 42 0.055
gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation... 42 0.055
gb|CW433514.1|CW433514 fsbb001f148m04f0 Sorghum methylation... 42 0.055
gb|CW489176.1|CW489176 fsbb001f265p08f0 Sorghum methylation... 42 0.055
gb|CW493541.1|CW493541 fsbb001f284f17f0 Sorghum methylation... 42 0.055
gb|BE362052.1|BE362052 DG1_84_F03.b1_A002 Dark Grown 1 (DG1... 42 0.055
gb|CD235748.1|CD235748 SS1_37_G03.g1_A012 Salt-stressed see... 42 0.055
gb|CD235780.1|CD235780 SS1_37_G02.g1_A012 Salt-stressed see... 42 0.055
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 42 0.055
gb|BZ334966.1|BZ334966 hx94f06.g1 WGS-SbicolorF (JM107 adap... 40 0.22
gb|CW215187.1|CW215187 104_647_11194409_148_37166_073 Sorgh... 40 0.22
gb|CD429460.1|CD429460 ETH1_4_G04.g1_A002 Ethylene-treated ... 40 0.22
gb|CN126660.1|CN126660 RHOH1_18_A06.g1_A002 Acid- and alkal... 40 0.22
gb|CX606533.1|CX606533 ANR1_3_C08.g1_A002 Anaerobic roots S... 40 0.22
gb|CX613481.1|CX613481 GABR1_8_A03.g1_A002 GA- or brassinol... 40 0.22
gb|CX621710.1|CX621710 GABR1_59_E11.g1_A002 GA- or brassino... 40 0.22
>gb|CL151515.1|CL151515 104_334_10779308_114_31361_092 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779308, DNA
sequence
Length = 733
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Plus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 77 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 136
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 137 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 196
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 197 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 256
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 297
>gb|CW070295.1|CW070295 104_321_10526663_5_30098 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10526663, DNA
sequence
Length = 437
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Plus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 166 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 225
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 226 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 285
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 286 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 345
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 346 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 386
>gb|AW677822.1|AW677822 WS1_11_B01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 484
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 267
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 266 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 207
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 206 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 147
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 146 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 106
>gb|AW677829.1|AW677829 WS1_11_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 267
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 266 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 207
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 206 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 147
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 146 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 106
>gb|AW680582.1|AW680582 WS1_6_A02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 507
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 345 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 286
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 285 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 226
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 225 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 166
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 165 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|AW746483.1|AW746483 WS1_53_B06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 458
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 347 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 288
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 287 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 228
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 227 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 168
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 167 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 127
>gb|AW747692.1|AW747692 WS1_75_D09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 469
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 277 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 218
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 217 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 158
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 157 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 98
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 97 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 57
>gb|AW924425.1|AW924425 WS1_69_C03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 338 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 279
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 278 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 219
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 218 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 159
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 158 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 118
>gb|AW924687.1|AW924687 WS1_71_B09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 345 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 286
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 285 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 226
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 225 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 166
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 165 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|AW924779.1|AW924779 WS1_72_B09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 345 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 286
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 285 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 226
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 225 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 166
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 165 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|AW925002.1|AW925002 WS1_74_B09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 404
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 338 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 279
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 278 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 219
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 218 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 159
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 158 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 118
>gb|BE363712.1|BE363712 WS1_69_C03.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 338 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 279
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 278 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 219
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 218 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 159
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 158 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 118
>gb|BE363792.1|BE363792 WS1_71_B09.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 491
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 345 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 286
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 285 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 226
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 225 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 166
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 165 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|BE593752.1|BE593752 WS1_101_G05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 270
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 269 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 210
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 209 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 150
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 149 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 109
>gb|BE594064.1|BE594064 WS1_101_G05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 478
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 270
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 269 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 210
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 209 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 150
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 149 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 109
>gb|CD230418.1|CD230418 SS1_43_A12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_43_A12_A012 5', mRNA sequence
Length = 555
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 305
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 304 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 245
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 244 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 185
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 184 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 144
>gb|CD423396.1|CD423396 SA1_23_F06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_F06_A002 3', mRNA sequence
Length = 490
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 219
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 218 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 159
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 158 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 99
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 98 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 58
>gb|CD423506.1|CD423506 SA1_23_F06.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_F06_A002 5', mRNA sequence
Length = 583
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CD424643.1|CD424643 SA1_8_C08.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_8_C08_A002 5', mRNA sequence
Length = 564
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CD425487.1|CD425487 SA1_12_G10.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_12_G10_A002 5', mRNA sequence
Length = 573
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 358 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 299
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 298 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 239
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 238 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 179
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 178 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 138
>gb|CD426603.1|CD426603 SA1_21_C03.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_21_C03_A002 5', mRNA sequence
Length = 554
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CD426879.1|CD426879 SA1_25_B01.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_25_B01_A002 5', mRNA sequence
Length = 490
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CD427661.1|CD427661 SA1_37_F08.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_37_F08_A002 5', mRNA sequence
Length = 563
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 344 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 285
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 284 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 225
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 224 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 165
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 164 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 124
>gb|CD461851.1|CD461851 SA1_31_E11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_31_E11_A002 3', mRNA sequence
Length = 537
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 346 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 287
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 286 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 227
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 226 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 167
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 166 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 126
>gb|CF758170.1|CF758170 DSAF1_28_D01.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_28_D01_A011 3', mRNA sequence
Length = 537
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 368 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 309
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 308 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 249
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 248 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 189
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 188 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 148
>gb|CN139123.1|CN139123 OX1_16_D03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_16_D03_A002 3', mRNA sequence
Length = 496
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 352 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 293
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 292 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 233
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 232 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 173
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 172 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 132
>gb|CN146416.1|CN146416 WOUND1_41_C07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_C07_A002 3', mRNA sequence
Length = 538
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CN146495.1|CN146495 WOUND1_41_C07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_C07_A002 5', mRNA sequence
Length = 554
Score = 248 bits (125), Expect = 5e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 339 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 280
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 279 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 220
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 219 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 160
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 159 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 119
>gb|AW680424.1|AW680424 WS1_52_H06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 514
Score = 242 bits (122), Expect = 3e-062
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 321 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 262
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 261 tagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 202
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 201 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 142
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 141 agctgccccgcgttgcacgaagccgccgacgccgtctc 104
>gb|AW747613.1|AW747613 WS1_74_B09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 543
Score = 242 bits (122), Expect = 3e-062
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 335 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 276
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 275 tagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 216
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 215 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 156
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 155 agctgccccgcgttgcacgaagccgccgacgccgtctc 118
>gb|CD425419.1|CD425419 SA1_12_G10.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_12_G10_A002 3', mRNA sequence
Length = 527
Score = 242 bits (122), Expect = 3e-062
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 315 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 256
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 255 tagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 196
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 195 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 136
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 135 agctgccccgcgttgcacgaagccgccgacgccgtctc 98
>gb|CD428429.1|CD428429 ETH1_31_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_31_A06_A002 5', mRNA sequence
Length = 527
Score = 240 bits (121), Expect = 1e-061
Identities = 196/221 (88%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 371 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 312
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 311 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 252
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| ||||| ||| |||| | ||||||| |||||| ||
Sbjct: 251 aggttggagcagcacgccgccaagggcgccgccccggacaacatcgccgacgcgcacacc 192
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 191 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 151
>gb|CN139195.1|CN139195 OX1_16_D03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_16_D03_A002 5', mRNA sequence
Length = 510
Score = 240 bits (121), Expect = 1e-061
Identities = 196/221 (88%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 342 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 283
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 282 acgtagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttg 223
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 222 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 163
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 162 gtcagatgccccgcgttgcacgaagccgccgacgccgtctc 122
>gb|AW680743.1|AW680743 WS1_6_A02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 234 bits (118), Expect = 7e-060
Identities = 193/218 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 342 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 283
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|| ||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 282 taacgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 223
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 222 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 163
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 162 agctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|CD423088.1|CD423088 SA1_27_F02.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_27_F02_A002 3', mRNA sequence
Length = 541
Score = 232 bits (117), Expect = 3e-059
Identities = 195/221 (88%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttagggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttctcggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|CD423201.1|CD423201 SA1_27_F02.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_27_F02_A002 5', mRNA sequence
Length = 562
Score = 232 bits (117), Expect = 3e-059
Identities = 195/221 (88%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 351 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttagggctgttg 292
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 291 acgtagcgcgcgtaggcggggttctcggcgaactggcacaagcacccctgctgcgccttg 232
Query: 410 aggttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagcc 469
|||||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||
Sbjct: 231 aggttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacacc 172
Query: 470 gccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagctgccccgcgttgcacgaagccgccgacgccgtctc 131
>gb|AW677892.1|AW677892 WS1_11_C03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 515
Score = 226 bits (114), Expect = 2e-057
Identities = 192/218 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 323 cagcgcggcagggcgaccccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 264
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|| ||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 263 taacgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 204
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 203 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 144
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 143 agctgccccgcgttgcacgaagccgccgacgccgtctc 106
>gb|AW746539.1|AW746539 WS1_53_B06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 407
Score = 220 bits (111), Expect = 1e-055
Identities = 183/207 (88%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 207 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 148
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 147 tagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 88
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
||||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 87 ttggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccgtc 28
Query: 473 agctgcccggcgttgcacgaagccgcc 499
|||||||| ||||||||||||||||||
Sbjct: 27 agctgccccgcgttgcacgaagccgcc 1
>gb|AW924891.1|AW924891 WS1_72_B09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 476
Score = 218 bits (110), Expect = 4e-055
Identities = 191/218 (87%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 268 cagcgcggcagggcgacgccgcaggaggcgacgggcttgcgcgcgttggggctgttgacg 209
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|| ||| |||||| |||| |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 208 taacgcgcgtaggcgggggtcttggcgaactggcacaagcacccctgctgcgccttgagg 149
Query: 413 ttggagcagcacgacgcggagggcctcgcgccggccgtgatcgccggcgcgcaagccgcc 472
|||||||||||| ||| |||||| ||| |||| | ||||||| |||||| ||| |
Sbjct: 148 gtggagcagcacgccgccgagggcgccgccccggacaacatcgccgacgcgcacaccggc 89
Query: 473 agctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||||| |||||||||||||||||||||||||||||
Sbjct: 88 agctgccccgcgttgcacgaagccgccgacgccgtctc 51
>gb|AW924293.1|AW924293 WS1_52_H06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 303
Score = 196 bits (99), Expect = 2e-048
Identities = 159/179 (88%)
Strand = Plus / Minus
Query: 332 cgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaag 391
||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||| |||
Sbjct: 303 cgcgcgttggggctgttgacgtagcgcgcgtaggcggggttcttggcgaactggcacaag 244
Query: 392 cacccctgctgcgccttgaggttggagcagcacgacgcggagggcctcgcgccggccgtg 451
|||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| |
Sbjct: 243 cacccctgctgcgccttgaggttggagcagcacgccgccgagggcgccgccccggacaac 184
Query: 452 atcgccggcgcgcaagccgccagctgcccggcgttgcacgaagccgccgacgccgtctc 510
||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 183 atcgccgacgcgcacaccgtcagctgccccgcgttgcacgaagccgccgacgccgtctc 125
>gb|DN552725.1|DN552725 pSHR-RT-MR-H2_H04_C018 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 416
Score = 188 bits (95), Expect = 4e-046
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 290 tagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttg 349
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 151 tagcagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttg 92
Query: 350 atgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttg 409
| ||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||
Sbjct: 91 acgtagcgcgcgtaggccgggttcttggcgaactggcacaagcacccctgctgcgccttg 32
Query: 410 aggttggagcagcacgacgcggagggc 436
|||||||||||||||| ||| ||||||
Sbjct: 31 aggttggagcagcacgccgccgagggc 5
>gb|CD427504.1|CD427504 SA1_37_F08.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_37_F08_A002 3', mRNA sequence
Length = 391
Score = 182 bits (92), Expect = 2e-044
Identities = 131/144 (90%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 176 cagcgcggcagggcgacgccgcaggaggcgacggtcttgcgcgcgttggggctgttgacg 117
Query: 353 tagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgccttgagg 412
|||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 116 tagcgcgcgtaggcggggttcttggcgaactggcacaagcacccctgctgcgccttgagg 57
Query: 413 ttggagcagcacgacgcggagggc 436
|||||||||||| ||| ||||||
Sbjct: 56 gtggagcagcacgccgccgagggc 33
>gb|AW679436.1|AW679436 WS1_24_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 354
Score = 157 bits (79), Expect = 1e-036
Identities = 109/119 (91%)
Strand = Plus / Minus
Query: 318 aggcgacgaccttgcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttca 377
|||||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||
Sbjct: 308 aggcgacggtcttgcgcgcgttggggctgttgacgtagcgcgcgtaggcggggttcttgg 249
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacgacgcggagggc 436
|||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 248 cgaactggcacaagcacccctgctgcgccttgaggttggagcagcacgccgccgagggc 190
Score = 63.9 bits (32), Expect = 1e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 475 ctgcccggcgttgcacgaagccgccgacgccgtctc 510
|||||| |||||||||||||||||||||||||||||
Sbjct: 178 ctgccccgcgttgcacgaagccgccgacgccgtctc 143
>gb|CL151516.1|CL151516 104_334_10779308_116_31362_092 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779308, DNA
sequence
Length = 720
Score = 131 bits (66), Expect = 8e-029
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 389 aagcacccctgctgcgccttgaggttggagcagcacgacgcggagggcctcgcgccggcc 448
||||||||||||||||||||||||||||||||||||| ||| |||||| ||| |||| |
Sbjct: 720 aagcacccctgctgcgccttgaggttggagcagcacgccgccgagggcgccgccccggac 661
Query: 449 gtgatcgccggcgcgcaagccgccagctgcccggcgttgcacgaagccgccgacgccgtc 508
||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 660 aacatcgccgacgcgcacaccgtcagctgccccgcgttgcacgaagccgccgacgccgtc 601
Query: 509 tc 510
||
Sbjct: 600 tc 599
>gb|AW679337.1|AW679337 WS1_24_F03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 217
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 472 cagctgcccggcgttgcacgaagccgccgacgccgtctc 510
||||||||| |||||||||||||||||||||||||||||
Sbjct: 210 cagctgccccgcgttgcacgaagccgccgacgccgtctc 172
>gb|BQ656026.1|BQ656026 pRC0309 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0309, mRNA sequence
Length = 272
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 290 tagcagcgcggcacggagacgccgcaggagg 320
||||||||||||| || ||||||||||||||
Sbjct: 236 tagcagcgcggcagggcgacgccgcaggagg 266
>gb|CL168869.1|CL168869 104_367_10812205_148_31786_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10812205, DNA
sequence
Length = 603
Score = 42.1 bits (21), Expect = 0.055
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 512 gccgccgccgtcgccagcaccaccagcac 540
|||||||||||||||| | ||||||||||
Sbjct: 391 gccgccgccgtcgccacctccaccagcac 419
>gb|CW334170.1|CW334170 104_832_11482355_148_36052_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482355, DNA
sequence
Length = 709
Score = 42.1 bits (21), Expect = 0.055
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 512 gccgccgccgtcgccagcaccaccagcac 540
|||||||||||||||| | ||||||||||
Sbjct: 312 gccgccgccgtcgccacctccaccagcac 340
>gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f065e16, DNA
sequence
Length = 720
Score = 42.1 bits (21), Expect = 0.055
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 512 gccgccgccgtcgccagcaccaccagcac 540
|||||||||||||||| | ||||||||||
Sbjct: 261 gccgccgccgtcgccacctccaccagcac 233
>gb|CW433514.1|CW433514 fsbb001f148m04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148m04, DNA
sequence
Length = 466
Score = 42.1 bits (21), Expect = 0.055
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 512 gccgccgccgtcgccagcaccaccagcac 540
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Sbjct: 261 gccgccgccgtcgccacctccaccagcac 233
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 202,879
Number of Sequences: 832831
Number of extensions: 202879
Number of successful extensions: 68028
Number of sequences better than 0.5: 63
Number of HSP's better than 0.5 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67872
Number of HSP's gapped (non-prelim): 115
length of query: 572
length of database: 491,359,669
effective HSP length: 19
effective length of query: 553
effective length of database: 475,535,880
effective search space: 262971341640
effective search space used: 262971341640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)