BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738959.2.3
(725 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF433612.1|CF433612 NIT1_28_C11.b1_A002 Nitrogen-deficie... 1011 0.0
gb|CX615302.1|CX615302 GABR1_19_G09.b1_A002 GA- or brassino... 1011 0.0
gb|CD235212.1|CD235212 SS1_28_D12.b1_A012 Salt-stressed see... 1005 0.0
gb|CN141047.1|CN141047 OX1_49_B06.b1_A002 Oxidatively-stres... 1003 0.0
gb|CX611862.1|CX611862 ANR1_27_D08.b1_A002 Anaerobic roots ... 1003 0.0
gb|CD230979.1|CD230979 SS1_7_A08.b1_A012 Salt-stressed seed... 995 0.0
gb|BG410969.1|BG410969 EM1_28_B08.g1_A002 Embryo 1 (EM1) So... 977 0.0
gb|CX618883.1|CX618883 GABR1_42_E12.b1_A002 GA- or brassino... 975 0.0
gb|BG355671.1|BG355671 EM1_16_F10.g1_A002 Embryo 1 (EM1) So... 971 0.0
gb|CF430435.1|CF430435 PH1_28_A03.b1_A002 Phosphorous-defic... 971 0.0
gb|CF433976.1|CF433976 NIT1_31_D06.b1_A002 Nitrogen-deficie... 971 0.0
gb|CF071290.1|CF071290 FE1_16_D06.g1_A002 Iron-deficient se... 967 0.0
gb|CF430220.1|CF430220 PH1_27_G09.b1_A002 Phosphorous-defic... 963 0.0
gb|CF429793.1|CF429793 PH1_24_F01.b1_A002 Phosphorous-defic... 957 0.0
gb|CF432658.1|CF432658 NIT1_18_B01.b1_A002 Nitrogen-deficie... 957 0.0
gb|CX607692.1|CX607692 ANR1_30_E03.b1_A002 Anaerobic roots ... 955 0.0
gb|BG101912.1|BG101912 RHIZ2_21_D05.g1_A003 Rhizome2 (RHIZ2... 946 0.0
gb|CX615450.1|CX615450 GABR1_20_E09.b1_A002 GA- or brassino... 942 0.0
gb|BG048443.1|BG048443 OV1_13_D12.g1_A002 Ovary 1 (OV1) Sor... 936 0.0
gb|CD231720.1|CD231720 SS1_23_B08.b1_A012 Salt-stressed see... 930 0.0
gb|CD222128.1|CD222128 CCC1_2_E05.b1_A007 Callus culture/ce... 926 0.0
gb|CF427058.1|CF427058 PH1_3_C03.b1_A002 Phosphorous-defici... 912 0.0
gb|BG158634.1|BG158634 RHIZ2_43_A11.g1_A003 Rhizome2 (RHIZ2... 908 0.0
gb|BG948170.1|BG948170 IP1_10_C04.g1_A002 Immature pannicle... 890 0.0
gb|CD224440.1|CD224440 CCC1_34_A05.b1_A007 Callus culture/c... 886 0.0
gb|BI098505.1|BI098505 IP1_33_C06.g1_A002 Immature pannicle... 880 0.0
gb|BE597954.1|BE597954 PI1_67_E07.g1_A002 Pathogen induced ... 872 0.0
gb|CD235205.1|CD235205 SS1_28_C05.b1_A012 Salt-stressed see... 862 0.0
gb|BG559083.1|BG559083 RHIZ2_54_D11.g1_A003 Rhizome2 (RHIZ2... 858 0.0
gb|CF755872.1|CF755872 DSAF1_1_H08.g1_A011 Drought-stressed... 858 0.0
gb|BG947151.1|BG947151 IP1_3_B09.g1_A002 Immature pannicle ... 856 0.0
gb|BG557917.1|BG557917 EM1_39_B11.g1_A002 Embryo 1 (EM1) So... 846 0.0
gb|BF586519.1|BF586519 FM1_29_C02.g1_A003 Floral-Induced Me... 844 0.0
gb|BG050630.1|BG050630 FM1_70_F06.g1_A003 Floral-Induced Me... 842 0.0
gb|BG947675.1|BG947675 IP1_7_F11.g1_A002 Immature pannicle ... 841 0.0
gb|BG102660.1|BG102660 RHIZ2_35_G02.g1_A003 Rhizome2 (RHIZ2... 819 0.0
gb|CD231685.1|CD231685 SS1_23_F08.b1_A012 Salt-stressed see... 815 0.0
gb|CD236565.1|CD236565 SS1_35_C03.b1_A012 Salt-stressed see... 815 0.0
gb|CD231960.1|CD231960 SS1_31_G04.b1_A012 Salt-stressed see... 801 0.0
gb|CF427660.1|CF427660 PH1_10_E03.b1_A002 Phosphorous-defic... 795 0.0
gb|CD232578.1|CD232578 SS1_46_E09.b1_A012 Salt-stressed see... 785 0.0
gb|CF430423.1|CF430423 PH1_28_D01.b1_A002 Phosphorous-defic... 773 0.0
gb|CD207501.1|CD207501 HS1_33_C10.b1_A012 Heat-shocked seed... 765 0.0
gb|BI245782.1|BI245782 IP1_64_D01.g1_A002 Immature pannicle... 735 0.0
gb|BE360625.1|BE360625 DG1_64_F10.g1_A002 Dark Grown 1 (DG1... 733 0.0
gb|BI098095.1|BI098095 IP1_32_A01.g1_A002 Immature pannicle... 733 0.0
gb|BG051935.1|BG051935 RHIZ2_6_G05.g1_A003 Rhizome2 (RHIZ2)... 729 0.0
gb|BG052559.1|BG052559 RHIZ2_26_H05.g1_A003 Rhizome2 (RHIZ2... 729 0.0
gb|AW285667.1|AW285667 LG1_319_H04.g1_A002 Light Grown 1 (L... 724 0.0
gb|CD206846.1|CD206846 HS1_25_D03.g1_A012 Heat-shocked seed... 724 0.0
gb|BI097942.1|BI097942 IP1_30_A01.g1_A002 Immature pannicle... 712 0.0
gb|BF480781.1|BF480781 FM1_14_H05.g1_A003 Floral-Induced Me... 698 0.0
gb|CB927941.1|CB927941 ABA1_35_D07.b1_A012 Abscisic acid-tr... 690 0.0
gb|BG051407.1|BG051407 FM1_56_B03.g1_A003 Floral-Induced Me... 686 0.0
gb|BI098518.1|BI098518 IP1_33_D08.g1_A002 Immature pannicle... 682 0.0
gb|BI140362.1|BI140362 IP1_52_D08.g1_A002 Immature pannicle... 678 0.0
gb|BI098517.1|BI098517 IP1_33_D07.g1_A002 Immature pannicle... 664 0.0
gb|BI075740.1|BI075740 IP1_24_F02.g1_A002 Immature pannicle... 652 0.0
gb|CD230244.1|CD230244 SS1_42_C02.b1_A012 Salt-stressed see... 617 e-175
gb|CW370398.1|CW370398 fsbb001f045e23f0 Sorghum methylation... 615 e-174
gb|CX606282.1|CX606282 ANR1_2_D11.b1_A002 Anaerobic roots S... 603 e-171
gb|CD462516.1|CD462516 ETH1_38_E11.b1_A002 Ethylene-treated... 593 e-168
gb|AW672136.1|AW672136 LG1_357_D04.b1_A002 Light Grown 1 (L... 579 e-163
gb|BG158487.1|BG158487 RHIZ2_41_A05.g1_A003 Rhizome2 (RHIZ2... 577 e-163
gb|CF755793.1|CF755793 DSAF1_1_H08.b1_A011 Drought-stressed... 577 e-163
gb|BG322453.1|BG322453 EM1_28_B08.b1_A002 Embryo 1 (EM1) So... 563 e-159
gb|CD230361.1|CD230361 SS1_43_C02.b1_A012 Salt-stressed see... 529 e-148
gb|AW284833.1|AW284833 LG1_278_F05.g1_A002 Light Grown 1 (L... 511 e-143
gb|BI351194.1|BI351194 IP1_71_B06.g1_A002 Immature pannicle... 509 e-142
gb|BG052719.1|BG052719 RHIZ2_28_H04.g1_A003 Rhizome2 (RHIZ2... 484 e-135
gb|CD235969.1|CD235969 SS1_25_D04.b1_A012 Salt-stressed see... 448 e-124
gb|BG048662.1|BG048662 OV1_21_D11.b1_A002 Ovary 1 (OV1) Sor... 440 e-122
gb|BG048966.1|BG048966 OV1_21_D11.g1_A002 Ovary 1 (OV1) Sor... 396 e-108
gb|BI211762.1|BI211762 IP1_27_F11.g1_A002 Immature pannicle... 392 e-107
gb|BG559000.1|BG559000 RHIZ2_53_D01.g1_A003 Rhizome2 (RHIZ2... 369 e-100
gb|AI724395.1|AI724395 RHIZ1_36_B07.y2_A001 Rhizome1 (RHIZ1... 345 3e-093
gb|AI724599.1|AI724599 RHIZ1_6_B07.y2_A001 Rhizome1 (RHIZ1)... 337 8e-091
gb|DR831422.2|DR831422 MT89 Sorghum bicolor greenbug-respon... 297 7e-079
gb|CW391224.1|CW391224 fsbb001f077e02k0 Sorghum methylation... 281 4e-074
gb|CN128624.1|CN128624 RHOH1_30_D09.g1_A002 Acid- and alkal... 281 4e-074
gb|CD462642.1|CD462642 ETH1_38_E11.g1_A002 Ethylene-treated... 196 2e-048
gb|BI075719.1|BI075719 IP1_24_D02.g1_A002 Immature pannicle... 182 3e-044
gb|CX606371.1|CX606371 ANR1_2_D11.g1_A002 Anaerobic roots S... 165 7e-039
gb|CX615535.1|CX615535 GABR1_20_E09.g1_A002 GA- or brassino... 163 3e-038
gb|CN125876.1|CN125876 RHOH1_13_H02.g1_A002 Acid- and alkal... 161 1e-037
gb|CX611949.1|CX611949 ANR1_27_D08.g1_A002 Anaerobic roots ... 145 7e-033
gb|CX622038.1|CX622038 GABR1_61_D10.g2_A002 GA- or brassino... 133 2e-029
gb|CW293212.1|CW293212 104_773_11414527_116_35587_022 Sorgh... 121 9e-026
gb|CN128536.1|CN128536 RHOH1_30_D09.b1_A002 Acid- and alkal... 121 9e-026
gb|BI098408.1|BI098408 IP1_32_A01.b1_A002 Immature pannicle... 119 4e-025
gb|CW293213.1|CW293213 104_773_11414527_148_35591_022 Sorgh... 117 1e-024
gb|CF430476.1|CF430476 PH1_28_D01.g1_A002 Phosphorous-defic... 105 6e-021
gb|CF430487.1|CF430487 PH1_28_A03.g1_A002 Phosphorous-defic... 98 1e-018
gb|CF433668.1|CF433668 NIT1_28_C11.g1_A002 Nitrogen-deficie... 98 1e-018
gb|CN141132.1|CN141132 OX1_49_B06.g1_A002 Oxidatively-stres... 98 1e-018
gb|BG050791.1|BG050791 FM1_70_F06.b1_A003 Floral-Induced Me... 92 8e-017
gb|CF430354.1|CF430354 PH1_27_G09.g1_A002 Phosphorous-defic... 92 8e-017
gb|CF427742.1|CF427742 PH1_10_E03.g1_A002 Phosphorous-defic... 72 8e-011
gb|CF434004.1|CF434004 NIT1_31_D06.g1_A002 Nitrogen-deficie... 64 2e-008
gb|CD429345.1|CD429345 ETH1_4_B06.b1_A002 Ethylene-treated ... 50 3e-004
>gb|CF433612.1|CF433612 NIT1_28_C11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_C11_A002 3', mRNA sequence
Length = 747
Score = 1011 bits (510), Expect = 0.0
Identities = 623/657 (94%), Gaps = 4/657 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 37 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 95
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 96 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 155
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 156 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 214
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 274
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 275 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 334
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 335 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 394
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 395 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 454
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 455 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 512
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 513 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 572
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 632
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 689
Score = 58.0 bits (29), Expect = 1e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggcttattgt 712
||||||||||||||||||||| ||||||||| |||| ||||
Sbjct: 706 agtcgattatagcaatgttgatgccattttgagctttttgt 746
>gb|CX615302.1|CX615302 GABR1_19_G09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_G09_A002 3', mRNA sequence
Length = 714
Score = 1011 bits (510), Expect = 0.0
Identities = 623/657 (94%), Gaps = 4/657 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 19 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 77
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 78 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 137
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 138 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 196
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 256
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 257 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 316
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 317 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 376
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 377 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 436
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 437 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 494
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 495 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 554
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 614
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 671
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccat 698
||||||||||||||||||||| |||||
Sbjct: 688 agtcgattatagcaatgttgatgccat 714
>gb|CD235212.1|CD235212 SS1_28_D12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_D12_A012 3', mRNA sequence
Length = 691
Score = 1005 bits (507), Expect = 0.0
Identities = 620/654 (94%), Gaps = 4/654 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 42 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 100
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 101 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 160
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 161 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 219
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 279
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 280 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 339
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 340 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 399
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 400 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 459
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 460 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 517
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 518 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 577
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 637
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgta 654
||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgta 691
>gb|CN141047.1|CN141047 OX1_49_B06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_B06_A002 3', mRNA sequence
Length = 792
Score = 1003 bits (506), Expect = 0.0
Identities = 622/657 (94%), Gaps = 4/657 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 82 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 140
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 141 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 200
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 259
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 319
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 320 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 379
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 380 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 439
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 499
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 500 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 557
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 558 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 617
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 677
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 678 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgttggtagcc 734
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 751 agtcgattatagcaatgttgatgccattttgagctt 786
>gb|CX611862.1|CX611862 ANR1_27_D08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_D08_A002 3', mRNA sequence
Length = 764
Score = 1003 bits (506), Expect = 0.0
Identities = 622/657 (94%), Gaps = 4/657 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 68 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 126
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 127 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 186
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 245
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 305
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 306 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 365
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 366 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 425
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 426 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 485
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 486 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 543
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||| ||||||||||||
Sbjct: 544 actcatagttgggttcgtcattattcgtggtcacatttcattacggagtttgagttccaa 603
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 663
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 720
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccatt 699
||||||||||||||||||||| ||||||
Sbjct: 737 agtcgattatagcaatgttgatgccatt 764
>gb|CD230979.1|CD230979 SS1_7_A08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_7_A08_A012 3', mRNA sequence
Length = 660
Score = 995 bits (502), Expect = 0.0
Identities = 615/649 (94%), Gaps = 4/649 (0%)
Strand = Plus / Plus
Query: 9 atgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggct 68
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 1 atgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggct 59
Query: 69 gtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagttttctgcta 128
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 60 gtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgcta 118
Query: 129 tgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagactggaccgat 188
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 119 tgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggccgat 178
Query: 189 taacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagtt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 taacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagtt 238
Query: 249 gatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagag 308
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 239 gatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagag 298
Query: 309 gaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcg 368
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 299 gaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaa 358
Query: 369 ggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaac 428
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 359 ggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaac 418
Query: 429 caaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactcatag 488
|||||||| || |||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 419 caaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatag 476
Query: 489 tcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaactta 548
| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| |
Sbjct: 477 ttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaacgga 536
Query: 549 atattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggc 608
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 537 atatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggc 596
Query: 609 cgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 agtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 645
>gb|BG410969.1|BG410969 EM1_28_B08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 685
Score = 977 bits (493), Expect = 0.0
Identities = 606/640 (94%), Gaps = 4/640 (0%)
Strand = Plus / Plus
Query: 18 ggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggt 77
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||
Sbjct: 1 ggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggt 59
Query: 78 gagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccga 137
|| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 60 gaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccga 118
Query: 138 tatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttggg 197
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 119 tatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttggg 178
Query: 198 gaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 238
Query: 258 agatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgga 317
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 239 agatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctga 298
Query: 318 catcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggctt 377
|||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 299 catcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggctt 358
Query: 378 ggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctg 437
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 ggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggccta 418
Query: 438 aattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcg 497
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 419 aactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcg 476
Query: 498 tcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcctt 557
|||||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 477 tcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacctt 536
Query: 558 tgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagt 617
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 537 tgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagt 596
Query: 618 ctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctctgcctacgcagatcttgtggtacttgtgtttgtagcc 636
>gb|CX618883.1|CX618883 GABR1_42_E12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_42_E12_A002 3', mRNA sequence
Length = 692
Score = 975 bits (492), Expect = 0.0
Identities = 605/639 (94%), Gaps = 4/639 (0%)
Strand = Plus / Plus
Query: 19 gatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtg 78
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 1 gatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtg 59
Query: 79 agcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgat 138
| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 60 aacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgat 118
Query: 139 atggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggg 198
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 119 atggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggg 178
Query: 199 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 238
Query: 259 gatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggac 318
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 239 gatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgac 298
Query: 319 atcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttg 378
||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 299 atcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttg 358
Query: 379 gtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctga 438
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 359 gtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaa 418
Query: 439 attgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgt 498
| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 419 actgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgt 476
Query: 499 cattatttgtggccacatttcattacggaatttgagttccaataaacttaatattccttt 558
||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 477 cattattcgtggtcacatttcattacggaatttgagttccaataaacggaatataccttt 536
Query: 559 gtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtc 618
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 537 gtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagtc 596
Query: 619 tctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctgcctacgcagatcttgtggtacttgtgtttgtagcc 635
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattt 700
||||||||||||||||||||| |||||||
Sbjct: 652 agtcgattatagcaatgttgatgccattt 680
>gb|BG355671.1|BG355671 EM1_16_F10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 668
Score = 971 bits (490), Expect = 0.0
Identities = 606/641 (94%), Gaps = 4/641 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| ||||||||||||| |||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatgctcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgag 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 637
>gb|CF430435.1|CF430435 PH1_28_A03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_A03_A002 3', mRNA sequence
Length = 696
Score = 971 bits (490), Expect = 0.0
Identities = 606/641 (94%), Gaps = 4/641 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgattgccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgag 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 637
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 654 agtcgattatagcaatgttgatgccattttgagctt 689
>gb|CF433976.1|CF433976 NIT1_31_D06.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_D06_A002 3', mRNA sequence
Length = 685
Score = 971 bits (490), Expect = 0.0
Identities = 606/641 (94%), Gaps = 4/641 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
|||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acattacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgag 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 637
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 656 agtcgattatagcaatgttga 676
>gb|CF071290.1|CF071290 FE1_16_D06.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_16_D06_A002 5', mRNA sequence
Length = 683
Score = 967 bits (488), Expect = 0.0
Identities = 604/639 (94%), Gaps = 4/639 (0%)
Strand = Plus / Minus
Query: 19 gatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtg 78
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 683 gatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtg 625
Query: 79 agcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgat 138
| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 624 aacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgat 566
Query: 139 atggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggg 198
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 565 atggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggg 506
Query: 199 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 446
Query: 259 gatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggac 318
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 445 gatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgac 386
Query: 319 atcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttg 378
||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 385 atcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttg 326
Query: 379 gtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctga 438
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 325 gtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaa 266
Query: 439 attgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgt 498
| |||||||| ||||| ||||||||| |||||||||| ||||||||||| ||| ||||
Sbjct: 265 actgccctgcggttggcaaagaatatc--cacgggggagaatactcatagttgggttcgt 208
Query: 499 cattatttgtggccacatttcattacggaatttgagttccaataaacttaatattccttt 558
||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 207 cattattcgtggtcacatttcattacggaatttgagttccaataaacggaatataccttt 148
Query: 559 gtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtc 618
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 147 gtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagtc 88
Query: 619 tctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tctgcctacgcagatcttgtggtacttgtgtttgtagcc 49
>gb|CF430220.1|CF430220 PH1_27_G09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_G09_A002 3', mRNA sequence
Length = 689
Score = 963 bits (486), Expect = 0.0
Identities = 605/641 (94%), Gaps = 4/641 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcctggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggtct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttggg 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 637
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 654 agtcgattatagcaatgttgatgccattttgagctt 689
>gb|CF429793.1|CF429793 PH1_24_F01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_24_F01_A002 3', mRNA sequence
Length = 661
Score = 957 bits (483), Expect = 0.0
Identities = 602/638 (94%), Gaps = 4/638 (0%)
Strand = Plus / Plus
Query: 19 gatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtg 78
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 1 gatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtg 59
Query: 79 agcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgat 138
| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 60 aacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgat 118
Query: 139 atggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggg 198
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 119 atggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggg 178
Query: 199 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 238
Query: 259 gatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggac 318
||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||
Sbjct: 239 gatgtaacagtgacgatgaccgagaacactcttgatgatccccgccagaggaagcctgac 298
Query: 319 atcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttg 378
||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||
Sbjct: 299 atcacaaaggcaaaggaagttttggggtgggagcccaagatcgtcctgaaggacggcttg 358
Query: 379 gtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctga 438
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 359 gtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaa 418
Query: 439 attgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgt 498
| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 419 actgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgt 476
Query: 499 cattatttgtggccacatttcattacggaatttgagttccaataaacttaatattccttt 558
||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 477 cattattcgtggtcacatttcattacggaatttgagttccaataaacggaatataccttt 536
Query: 559 gtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtc 618
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 537 gtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagtc 596
Query: 619 tctgcctacgcagatcttgtggtacttgtgtttgtagc 656
||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctgcctacgcagatcttgtggtacttgtgtttgtagc 634
>gb|CF432658.1|CF432658 NIT1_18_B01.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_18_B01_A002 3', mRNA sequence
Length = 667
Score = 957 bits (483), Expect = 0.0
Identities = 596/630 (94%), Gaps = 4/630 (0%)
Strand = Plus / Plus
Query: 28 tgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtgagcccctga 87
||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||
Sbjct: 1 tgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtgaacccctga 59
Query: 88 ctgtccagaggccaggaacacagactaggagttttctgctatgttgccgatatggttgat 147
||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 60 ctgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgatatggttgat 118
Query: 148 ggtcttattaagctgatgaatggaaacaagactggaccgattaacttggggaacccaggt 207
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 119 ggtcttattaagctgatgaatggaaacaacactgggccgattaacttggggaacccaggt 178
Query: 208 gaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgaca 267
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 179 gaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtaaca 238
Query: 268 gtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaag 327
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 239 gtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatcacaaag 298
Query: 328 gcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatg 387
|| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 299 gcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatg 358
Query: 388 gaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctg 447
|||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||
Sbjct: 359 gaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctg 418
Query: 448 cagttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattatttg 507
| ||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 419 cggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcattattcg 476
Query: 508 tggccacatttcattacggaatttgagttccaataaacttaatattcctttgtcgttcac 567
||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 477 tggtcacatttcattacggaatttgagttccaataaacggaatatacctttgtcgttcac 536
Query: 568 cttgaaggattgtattattagaattttcatacaaggctggccgttcgagtctctgcctac 627
||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 537 cttgaaggattgtattattagaattttcatacagggctggcagtttgagtctctgcctac 596
Query: 628 gcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||
Sbjct: 597 gcagatcttgtggtacttgtgtttgtagcc 626
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 643 agtcgattatagcaatgttga 663
>gb|CX607692.1|CX607692 ANR1_30_E03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_30_E03_A002 3', mRNA sequence
Length = 670
Score = 955 bits (482), Expect = 0.0
Identities = 604/641 (94%), Gaps = 4/641 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacatgattgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgag 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgtagcc 637
>gb|BG101912.1|BG101912 RHIZ2_21_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 629
Score = 946 bits (477), Expect = 0.0
Identities = 590/624 (94%), Gaps = 4/624 (0%)
Strand = Plus / Plus
Query: 14 cctaggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcg 73
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 1 cctaggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcg 59
Query: 74 cggtgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttg 133
||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 60 tggtgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttg 118
Query: 134 ccgatatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaact 193
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 119 ccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaact 178
Query: 194 tggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatca 238
Query: 254 acccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagc 313
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 239 acccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagc 298
Query: 314 cggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacg 373
| |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 299 ctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacg 358
Query: 374 gcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaagg 433
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 359 gcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaagg 418
Query: 434 cctgaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcggg 493
||| || |||||||| ||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 419 cctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttggg 476
Query: 494 ctcgtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatatt 553
||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 477 ttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatata 536
Query: 554 cctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttc 613
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 537 cctttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagttt 596
Query: 614 gagtctctgcctacgcagatcttg 637
||||||||||||||||||||||||
Sbjct: 597 gagtctctgcctacgcagatcttg 620
>gb|CX615450.1|CX615450 GABR1_20_E09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_E09_A002 3', mRNA sequence
Length = 690
Score = 942 bits (475), Expect = 0.0
Identities = 600/638 (94%), Gaps = 4/638 (0%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| |||||||||| |||||| || |||| |||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagattaggagctt-ctgccatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttttggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |
Sbjct: 419 aaattgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttg 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggactatacct 536
Query: 557 ttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgag 616
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 537 ttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgag 596
Query: 617 tctctgcctacgcagatcttgtggtacttgtgtttgta 654
||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tctctgcctacgcagatcttgtggtacttgtgtttgta 634
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 654 agtcgattatagcaatgttgatgccattttgagctt 689
>gb|BG048443.1|BG048443 OV1_13_D12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 936 bits (472), Expect = 0.0
Identities = 585/619 (94%), Gaps = 4/619 (0%)
Strand = Plus / Plus
Query: 19 gatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtg 78
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 1 gatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtg 59
Query: 79 agcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgat 138
| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 60 aacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgat 118
Query: 139 atggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggg 198
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 119 atggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggg 178
Query: 199 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 238
Query: 259 gatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggac 318
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 239 gatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgac 298
Query: 319 atcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttg 378
||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 299 atcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttg 358
Query: 379 gtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctga 438
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 359 gtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaa 418
Query: 439 attgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgt 498
| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 419 actgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgt 476
Query: 499 cattatttgtggccacatttcattacggaatttgagttccaataaacttaatattccttt 558
||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 477 cattattcgtggtcacatttcattacggaatttgagttccaataaacggaatataccttt 536
Query: 559 gtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtc 618
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 537 gtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagtc 596
Query: 619 tctgcctacgcagatcttg 637
|||||||||||||||||||
Sbjct: 597 tctgcctacgcagatcttg 615
>gb|CD231720.1|CD231720 SS1_23_B08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_B08_A012 3', mRNA sequence
Length = 651
Score = 930 bits (469), Expect = 0.0
Identities = 576/608 (94%), Gaps = 4/608 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 39 caacacctatgggcctaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 97
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 98 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 157
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 158 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 216
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 276
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 277 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 336
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 337 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 396
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 397 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 456
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 457 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 514
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 515 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 574
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 634
Query: 601 aggctggc 608
|||||||
Sbjct: 635 gggctggc 642
>gb|CD222128.1|CD222128 CCC1_2_E05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E05_A007 3', mRNA sequence
Length = 658
Score = 926 bits (467), Expect = 0.0
Identities = 583/618 (94%), Gaps = 4/618 (0%)
Strand = Plus / Plus
Query: 40 tgttgctagcaacttcatctgctcaggctgtgcgcggtgagcccctgactgtccagaggc 99
||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 tgttgttagcaacttcat-tgctcaggctgtgcgtggtgaacccctgactgtccagaggc 59
Query: 100 caggaacacagactaggagttttctgctatgttgccgatatggttgatggtcttattaag 159
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 60 ccggaacacagactaggagctt-ctgctatgttgccgatatggttgatggtcttattaag 118
Query: 160 ctgatgaatggaaacaagactggaccgattaacttggggaacccaggtgaattcaccatg 219
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 119 ctgatgaatggaaacaacactgggccgattaacttggggaacccaggtgaattcaccatg 178
Query: 220 ctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtgacgatgacc 279
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 179 ctggaacttgctgagaatgtgaaggagttgatcaacccagatgtaacagtgacgatgacc 238
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaaggcgaaggaagtt 339
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 239 gagaacactcctgatgatccccgccagaggaagcctgacatcacaaaggcaaaggaagtt 298
Query: 340 ctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggaggatgatttc 399
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 299 ctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggaggatgatttc 358
Query: 400 cgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagttggggaag 459
|||||||||||| |||||||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 359 cgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcggttggcaaag 418
Query: 460 aatatccacacgggggagcatactcatagtcgggctcgtcattatttgtggccacatttc 519
|||||| |||||||||||||||||||||| ||| ||||||||||| | || ||||||||
Sbjct: 419 aatatc--cacgggggagcatactcatagttgggttcgtcattattcgcggtcacatttc 476
Query: 520 attacggaatttgagttccaataaacttaatattcctttgtcgttcaccttgaaggattg 579
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 477 attacggaatttgagttccaataaacggaatatacctttgtcgttcaccttgaaggattg 536
Query: 580 tattattagaattttcatacaaggctggccgttcgagtctctgcctacgcagatcttgtg 639
||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 537 tattattagaattttcatacagggctggcagtttgagtctctgcctacgcagatcttgtg 596
Query: 640 gtacttgtgtttgtagcc 657
||||||||||||||||||
Sbjct: 597 gtacttgtgtttgtagcc 614
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccatt 699
||||||||||||||||||||| ||||||
Sbjct: 631 agtcgattatagcaatgttgatgccatt 658
>gb|CF427058.1|CF427058 PH1_3_C03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_C03_A002 3', mRNA sequence
Length = 623
Score = 912 bits (460), Expect = 0.0
Identities = 566/599 (94%), Gaps = 3/599 (0%)
Strand = Plus / Plus
Query: 59 tgctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggag 118
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 5 tgctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggag 64
Query: 119 ttttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaaga 178
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 65 ctt-ctgctatgttgccgatatggttgatggtcttattaagctgatgagtggaaacaaca 123
Query: 179 ctggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatg 238
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctgggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatg 183
Query: 239 tgaaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacc 298
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 184 tgaaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatc 243
Query: 299 cccgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaaga 358
|||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 244 cccgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaaga 303
Query: 359 tcgtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgc 418
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 304 tcgtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgc 363
Query: 419 ccaagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagc 478
|||||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||
Sbjct: 364 ccaagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagc 421
Query: 479 atactcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttcc 538
||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 422 atactcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttcc 481
Query: 539 aataaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcata 598
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aataaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcata 541
Query: 599 caaggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cagggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 600
>gb|BG158634.1|BG158634 RHIZ2_43_A11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 612
Score = 908 bits (458), Expect = 0.0
Identities = 561/593 (94%), Gaps = 3/593 (0%)
Strand = Plus / Plus
Query: 65 ggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagttttct 124
||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 1 ggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagctt-ct 59
Query: 125 gctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagactggac 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 60 gctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggc 119
Query: 185 cgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagg 179
Query: 245 agttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgcc 304
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 agttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgcc 239
Query: 305 agaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcc 364
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 240 agaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcc 299
Query: 365 tgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaaga 424
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 300 tgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaaga 359
Query: 425 aaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactc 484
|||||||||||| || |||||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 360 aaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactc 417
Query: 485 atagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaa 544
||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 418 atagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaa 477
Query: 545 cttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggc 604
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 478 cggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagggc 537
Query: 605 tggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 590
>gb|BG948170.1|BG948170 IP1_10_C04.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 624
Score = 890 bits (449), Expect = 0.0
Identities = 546/576 (94%), Gaps = 3/576 (0%)
Strand = Plus / Plus
Query: 82 ccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgatatg 141
||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 ccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgatatg 59
Query: 142 gttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttggggaac 201
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 60 gttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttggggaac 119
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagat 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagat 179
Query: 262 gtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatc 321
|| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 180 gtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatc 239
Query: 322 acaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtg 381
|||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 240 acaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtg 299
Query: 382 ctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaatt 441
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
Sbjct: 300 ctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaact 359
Query: 442 gccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcat 501
||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 360 gccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcat 417
Query: 502 tatttgtggccacatttcattacggaatttgagttccaataaacttaatattcctttgtc 561
|||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 418 tattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacctttgtc 477
Query: 562 gttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtctct 621
||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 478 gttcaccttgaaggattgtattattagaattttcatacagggctggcagtttgagtctct 537
Query: 622 gcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||||||||
Sbjct: 538 gcctacgcagatcttgtggtacttgtgtttgtagcc 573
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttg 702
||||||||||||||||||||| |||||||||
Sbjct: 590 agtcgattatagcaatgttgatgccattttg 620
>gb|CD224440.1|CD224440 CCC1_34_A05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_34_A05_A007 3', mRNA sequence
Length = 623
Score = 886 bits (447), Expect = 0.0
Identities = 550/582 (94%), Gaps = 3/582 (0%)
Strand = Plus / Plus
Query: 76 gtgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgcc 135
|||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 1 gtgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgcc 59
Query: 136 gatatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttg 195
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 60 gatatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttg 119
Query: 196 gggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaac 179
Query: 256 ccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccg 315
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 180 ccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcct 239
Query: 316 gacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggc 375
|||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 240 gacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggc 299
Query: 376 ttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcc 435
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 ttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcc 359
Query: 436 tgaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggct 495
| || |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |
Sbjct: 360 taaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggtt 417
Query: 496 cgtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcc 555
||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 418 ggtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacc 477
Query: 556 tttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcga 615
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct: 478 tttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagtttga 537
Query: 616 gtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 579
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccatt 699
||||||||||||||||||||| ||||||
Sbjct: 596 agtcgattatagcaatgttgatgccatt 623
>gb|BI098505.1|BI098505 IP1_33_C06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 615
Score = 880 bits (444), Expect = 0.0
Identities = 541/571 (94%), Gaps = 3/571 (0%)
Strand = Plus / Plus
Query: 87 actgtccagaggccaggaacacagactaggagttttctgctatgttgccgatatggttga 146
|||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 actgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgatatggttga 59
Query: 147 tggtcttattaagctgatgaatggaaacaagactggaccgattaacttggggaacccagg 206
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 60 tggtcttattaagctgatgaatggaaacaacactgggccgattaacttggggaacccagg 119
Query: 207 tgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgac 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 120 tgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtaac 179
Query: 267 agtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 180 agtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatcacaaa 239
Query: 327 ggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcat 386
||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 240 ggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcat 299
Query: 387 ggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccct 446
||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||
Sbjct: 300 ggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccct 359
Query: 447 gcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattattt 506
|| ||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct: 360 gcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcattattc 417
Query: 507 gtggccacatttcattacggaatttgagttccaataaacttaatattcctttgtcgttca 566
|||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 418 gtggtcacatttcattacggaatttgagttccaataaacggaatatacctttgtcgttca 477
Query: 567 ccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtctctgccta 626
|||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 478 ccttgaaggattgtattattagaattttcatacagggctggcagtttgagtctctgccta 537
Query: 627 cgcagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||||
Sbjct: 538 cgcagatcttgtggtacttgtgtttgtagcc 568
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttg 702
||||||||||||||||||||| |||||||||
Sbjct: 585 agtcgattatagcaatgttgatgccattttg 615
>gb|BE597954.1|BE597954 PI1_67_E07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 872 bits (440), Expect = 0.0
Identities = 547/579 (94%), Gaps = 4/579 (0%)
Strand = Plus / Plus
Query: 18 ggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggt 77
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||
Sbjct: 1 ggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggt 59
Query: 78 gagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccga 137
|| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 60 gaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccga 118
Query: 138 tatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttggg 197
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 119 tatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttggg 178
Query: 198 gaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 238
Query: 258 agatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgga 317
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 239 agatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctga 298
Query: 318 catcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggctt 377
|||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 299 catcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggctt 358
Query: 378 ggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctg 437
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 ggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggccta 418
Query: 438 aattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcg 497
|| |||| ||| ||||| ||||||||| |||||||||||||||||||||| ||| |||
Sbjct: 419 aactgccgtgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcg 476
Query: 498 tcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcctt 557
|||||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 477 tcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacctt 536
Query: 558 tgtcgttcaccttgaaggattgtattattagaattttca 596
|||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgtcgttcaccttgaaggattgtattattagaattttca 575
>gb|CD235205.1|CD235205 SS1_28_C05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_C05_A012 3', mRNA sequence
Length = 603
Score = 862 bits (435), Expect = 0.0
Identities = 535/566 (94%), Gaps = 3/566 (0%)
Strand = Plus / Plus
Query: 92 ccagaggccaggaacacagactaggagttttctgctatgttgccgatatggttgatggtc 151
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 1 ccagaggcccggaacacagactaggagctt-ctgctatgttgccgatatggttgatggtc 59
Query: 152 ttattaagctgatgaatggaaacaagactggaccgattaacttggggaacccaggtgaat 211
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 60 ttattaagctgatgaatggaaacaacactgggccgattaacttggggaacccaggtgaat 119
Query: 212 tcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtga 271
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 120 tcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccaggtgtaacagtga 179
Query: 272 cgatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaaggcga 331
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
Sbjct: 180 cgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatcacaaaggcaa 239
Query: 332 aggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggagg 391
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 240 aggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggagg 299
Query: 392 atgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagt 451
|||||||||||||||||||| |||||||||||||||||||||||| || |||||||| ||
Sbjct: 300 atgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcggt 359
Query: 452 tggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattatttgtggc 511
||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 360 tggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcattattcgtggt 417
Query: 512 cacatttcattacggaatttgagttccaataaacttaatattcctttgtcgttcaccttg 571
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 418 cacatttcattacggaatttgagttccaataaacggaatatacctttgtcgttcaccttg 477
Query: 572 aaggattgtattattagaattttcatacaaggctggccgttcgagtctctgcctacgcag 631
||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 478 aaggattgtattattagaattttcatacagggctggcagtttgagtctctgcctacgcag 537
Query: 632 atcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||
Sbjct: 538 atcttgtggtacttgtgtttgtagcc 563
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 580 agtcgattatagcaatgttga 600
>gb|BG559083.1|BG559083 RHIZ2_54_D11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 612
Score = 858 bits (433), Expect = 0.0
Identities = 527/556 (94%), Gaps = 3/556 (0%)
Strand = Plus / Plus
Query: 102 ggaacacagactaggagttttctgctatgttgccgatatggttgatggtcttattaagct 161
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaacacagactaggagctt-ctgctatgttgccgatatggttgatggtcttattaagct 60
Query: 162 gatgaatggaaacaagactggaccgattaacttggggaacccaggtgaattcaccatgct 221
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgaatggaaacaacactgggccgattaacttggggaacccaggtgaattcaccatgct 120
Query: 222 ggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtgacgatgaccga 281
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 ggaacttgctgagaatgtgaaggagttgatcaacccagatgtaacagtgacgatgaccga 180
Query: 282 gaacactcctgatgacccccgccagaggaagccggacatcacaaaggcgaaggaagttct 341
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 181 gaacactcctgatgatccccgccagaggaagcctgacatcacaaaggcaaaggaagttct 240
Query: 342 gggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggaggatgatttccg 401
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 ggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggaggatgatttccg 300
Query: 402 ggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagttggggaagaa 461
|||||||||| |||||||||||||||||||||||| || |||||||| ||||| |||||
Sbjct: 301 ggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcggttggcaaagaa 360
Query: 462 tatccacacgggggagcatactcatagtcgggctcgtcattatttgtggccacatttcat 521
|||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||||||||
Sbjct: 361 tatc--cacgggggagcatactcatagttgggttcgtcattattcgtggtcacatttcat 418
Query: 522 tacggaatttgagttccaataaacttaatattcctttgtcgttcaccttgaaggattgta 581
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 419 tacggaatttgagttccaataaacggaatatacctttgtcgttcaccttgaaggattgta 478
Query: 582 ttattagaattttcatacaaggctggccgttcgagtctctgcctacgcagatcttgtggt 641
||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 479 ttattagaattttcatacagggctggcagtttgagtctctgcctacgcagatcttgtggt 538
Query: 642 acttgtgtttgtagcc 657
||||||||||||||||
Sbjct: 539 acttgtgtttgtagcc 554
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggcttattgtt 713
||||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 571 agtcgattatagcaatgttgatgccattttgagctttttgtt 612
>gb|CF755872.1|CF755872 DSAF1_1_H08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_1_H08_A011 3', mRNA sequence
Length = 613
Score = 858 bits (433), Expect = 0.0
Identities = 527/556 (94%), Gaps = 3/556 (0%)
Strand = Plus / Plus
Query: 102 ggaacacagactaggagttttctgctatgttgccgatatggttgatggtcttattaagct 161
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaacacagactaggagctt-ctgctatgttgccgatatggttgatggtcttattaagct 60
Query: 162 gatgaatggaaacaagactggaccgattaacttggggaacccaggtgaattcaccatgct 221
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgaatggaaacaacactgggccgattaacttggggaacccaggtgaattcaccatgct 120
Query: 222 ggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtgacgatgaccga 281
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 ggaacttgctgagaatgtgaaggagttgatcaacccagatgtaacagtgacgatgaccga 180
Query: 282 gaacactcctgatgacccccgccagaggaagccggacatcacaaaggcgaaggaagttct 341
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 181 gaacactcctgatgatccccgccagaggaagcctgacatcacaaaggcaaaggaagttct 240
Query: 342 gggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggaggatgatttccg 401
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 ggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggaggatgatttccg 300
Query: 402 ggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagttggggaagaa 461
|||||||||| |||||||||||||||||||||||| || |||||||| ||||| |||||
Sbjct: 301 ggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcggttggcaaagaa 360
Query: 462 tatccacacgggggagcatactcatagtcgggctcgtcattatttgtggccacatttcat 521
|||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||||||||
Sbjct: 361 tatc--cacgggggagcatactcatagttgggttcgtcattattcgtggtcacatttcat 418
Query: 522 tacggaatttgagttccaataaacttaatattcctttgtcgttcaccttgaaggattgta 581
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 419 tacggaatttgagttccaataaacggaatatacctttgtcgttcaccttgaaggattgta 478
Query: 582 ttattagaattttcatacaaggctggccgttcgagtctctgcctacgcagatcttgtggt 641
||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 479 ttattagaattttcatacagggctggcagtttgagtctctgcctacgcagatcttgtggt 538
Query: 642 acttgtgtttgtagcc 657
||||||||||||||||
Sbjct: 539 acttgtgtttgtagcc 554
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 571 agtcgattatagcaatgttgatgccattttgagctt 606
>gb|BG947151.1|BG947151 IP1_3_B09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 593
Score = 856 bits (432), Expect = 0.0
Identities = 526/555 (94%), Gaps = 3/555 (0%)
Strand = Plus / Plus
Query: 103 gaacacagactaggagttttctgctatgttgccgatatggttgatggtcttattaagctg 162
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacacagactaggagctt-ctgctatgttgccgatatggttgatggtcttattaagctg 59
Query: 163 atgaatggaaacaagactggaccgattaacttggggaacccaggtgaattcaccatgctg 222
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atgaatggaaacaacactgggccgattaacttggggaacccaggtgaattcaccatgctg 119
Query: 223 gaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtgacgatgaccgag 282
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 120 gaacttgctgagaatgtgaaggagttgatcaacccagatgtaacagtgacgatgaccgag 179
Query: 283 aacactcctgatgacccccgccagaggaagccggacatcacaaaggcgaaggaagttctg 342
|||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 180 aacactcctgatgatccccgccagaggaagcctgacatcacaaaggcaaaggaagttctg 239
Query: 343 ggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggaggatgatttccgg 402
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 240 gggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggaggatgatttccgg 299
Query: 403 gagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagttggggaagaat 462
||||||||| |||||||||||||||||||||||| || |||||||| ||||| ||||||
Sbjct: 300 gagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcggttggcaaagaat 359
Query: 463 atccacacgggggagcatactcatagtcgggctcgtcattatttgtggccacatttcatt 522
||| |||||||||||||||||||||| ||| ||||||||||| |||| |||||||||||
Sbjct: 360 atc--cacgggggagcatactcatagttgggttcgtcattattcgtggtcacatttcatt 417
Query: 523 acggaatttgagttccaataaacttaatattcctttgtcgttcaccttgaaggattgtat 582
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 418 acggaatttgagttccaataaacggaatatacctttgtcgttcaccttgaaggattgtat 477
Query: 583 tattagaattttcatacaaggctggccgttcgagtctctgcctacgcagatcttgtggta 642
|||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 478 tattagaattttcatacagggctggcagtttgagtctctgcctacgcagatcttgtggta 537
Query: 643 cttgtgtttgtagcc 657
|||||||||||||||
Sbjct: 538 cttgtgtttgtagcc 552
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 569 agtcgattatagcaatgttga 589
>gb|BG557917.1|BG557917 EM1_39_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 846 bits (427), Expect = 0.0
Identities = 550/585 (94%), Gaps = 6/585 (1%)
Strand = Plus / Plus
Query: 17 aggatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcgg 76
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 1 aggatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtgg 59
Query: 77 tgagcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccg 136
||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 60 tgaacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccg 118
Query: 137 atatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgg 196
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 119 atatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgg 178
Query: 197 ggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 256
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggaacncaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacc 238
Query: 257 cagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccgg 316
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 239 cagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctg 298
Query: 317 acatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggct 376
||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 299 acatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggct 358
Query: 377 tggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcct 436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcct 418
Query: 437 gaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctc 496
|| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||
Sbjct: 419 aaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttc 476
Query: 497 gtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatattcct 556
||||||||| |||| |||||||||||||||||||||||||||||||||| |||| | ||
Sbjct: 477 gtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaata-tact 535
Query: 557 ttgtcgttcaccttgaag-gattgtattattagaattttcataca 600
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 536 ttgtcgttcaccttgaagaaattgtattattagaattttcataca 580
>gb|BF586519.1|BF586519 FM1_29_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 574
Score = 844 bits (426), Expect = 0.0
Identities = 510/537 (94%), Gaps = 2/537 (0%)
Strand = Plus / Plus
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 61
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 121
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 122 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 181
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 182 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 241
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 301
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 302 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 359
Query: 481 actcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaa 540
||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 360 actcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaa 419
Query: 541 taaacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcataca 600
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 taaacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcataca 479
Query: 601 aggctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gggctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 536
>gb|BG050630.1|BG050630 FM1_70_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 580
Score = 842 bits (425), Expect = 0.0
Identities = 545/580 (93%), Gaps = 5/580 (0%)
Strand = Plus / Plus
Query: 30 atgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtgagcccctgact 89
||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 1 atgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtgaacccctgact 59
Query: 90 gtccagaggccaggaacacagactaggagttttctgctatgttgccgatatggttgatgg 149
||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 60 gtccagaggcccggaacacagactaggagctt-ctgctatgttgccgatatggttgatgg 118
Query: 150 tcttattaagctgatgaatggaaacaagactggaccgattaacttggggaacccaggtga 209
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 119 tcttattaagctgatgaatggaaacaacactgggccgattaacttggggaacccaggtga 178
Query: 210 attcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagt 269
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 179 attcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtaacagt 238
Query: 270 gacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaaggc 329
||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 239 gacgatgaccgagaacactcctgatgatccccaccagaggaagcctgacatcacaaaggc 298
Query: 330 gaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatgga 389
|||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 299 aaaggaagttctggggtgggagcccaagatcgtcctgaagggcggcttggtgctcatgga 358
Query: 390 ggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgca 449
|||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||
Sbjct: 359 ggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgcg 418
Query: 450 gttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattatttgtg 509
||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| |||
Sbjct: 419 gttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcattattcgtg 476
Query: 510 gccacatttcattacggaatttgagttccaataaacttaatattcctttgtcgttcacct 569
| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 477 gtcacatttcattacggaatttgagttccaataaacggaatatacctttgtcgttcacct 536
Query: 570 tgaaggatt-gtattattagaattttcatacaaggctggc 608
||||||||| |||||||||||||||||||||| |||||||
Sbjct: 537 tgaaggattggtattattagaattttcatacagggctggc 576
>gb|BG947675.1|BG947675 IP1_7_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 584
Score = 841 bits (424), Expect = 0.0
Identities = 508/535 (94%), Gaps = 2/535 (0%)
Strand = Plus / Plus
Query: 123 ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagactgg 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacactgg 60
Query: 183 accgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaa 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaa 120
Query: 243 ggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccg 302
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 121 ggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccg 180
Query: 303 ccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgt 362
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 181 ccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgt 240
Query: 363 cctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaa 422
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 cctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaa 300
Query: 423 gaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatac 482
|||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 301 gaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatac 358
Query: 483 tcatagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaata 542
||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 359 tcatagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaata 418
Query: 543 aacttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaag 602
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 419 aacggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagg 478
Query: 603 gctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 533
Score = 54.0 bits (27), Expect = 2e-005
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttg 702
||||||||||||||||||||| |||||||||
Sbjct: 550 agtcgattatagcaatgttgatgccattttg 580
>gb|BG102660.1|BG102660 RHIZ2_35_G02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 558
Score = 819 bits (413), Expect = 0.0
Identities = 497/524 (94%), Gaps = 2/524 (0%)
Strand = Plus / Plus
Query: 134 ccgatatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaact 193
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 5 ccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaact 64
Query: 194 tggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatca 124
Query: 254 acccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagc 313
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 125 acccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagc 184
Query: 314 cggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacg 373
| |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 185 ctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacg 244
Query: 374 gcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaagg 433
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 245 gcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaagg 304
Query: 434 cctgaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcggg 493
||| || |||||||| ||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 305 cctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttggg 362
Query: 494 ctcgtcattatttgtggccacatttcattacggaatttgagttccaataaacttaatatt 553
||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 363 ttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaatata 422
Query: 554 cctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttc 613
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 423 cctttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggcagttt 482
Query: 614 gagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 526
>gb|CD231685.1|CD231685 SS1_23_F08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_F08_A012 3', mRNA sequence
Length = 582
Score = 815 bits (411), Expect = 0.0
Identities = 498/526 (94%), Gaps = 2/526 (0%)
Strand = Plus / Plus
Query: 132 tgccgatatggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaa 191
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1 tgccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaa 60
Query: 192 cttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgat 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgat 120
Query: 252 caacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaa 311
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 caacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaa 180
Query: 312 gccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcggga 371
||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||
Sbjct: 181 gcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaagga 240
Query: 372 cggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaa 431
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 cggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaa 300
Query: 432 ggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactcatagtcg 491
||||| || |||||||| ||||| ||||||||| |||||||||||||||||||||| |
Sbjct: 301 ggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttg 358
Query: 492 ggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaacttaata 551
|| ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 359 ggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaata 418
Query: 552 ttcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgt 611
| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 419 tacctttgtcgttccccttgaaggattgtattattagaattttcatacagggctggcagt 478
Query: 612 tcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 524
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggcttattgt 712
||||||||||||||||||||| || |||||| |||| ||||
Sbjct: 541 agtcgattatagcaatgttgatgctattttgagctttttgt 581
>gb|CD236565.1|CD236565 SS1_35_C03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_35_C03_A012 3', mRNA sequence
Length = 552
Score = 815 bits (411), Expect = 0.0
Identities = 501/530 (94%), Gaps = 2/530 (0%)
Strand = Plus / Plus
Query: 128 atgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagactggaccga 187
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 atgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacactgggccga 60
Query: 188 ttaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagt 120
Query: 248 tgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccaga 307
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 tgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccaga 180
Query: 308 ggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgc 367
||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 181 ggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagattgtcctga 240
Query: 368 gggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaa 427
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 aggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaa 300
Query: 428 ccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactcata 487
||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||||||
Sbjct: 301 ccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcata 358
Query: 488 gtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaactt 547
|| ||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||
Sbjct: 359 gttgggttcgtcattattcgtggtcacatttcattacggagtttgagttccaataaacgg 418
Query: 548 aatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctgg 607
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 419 aatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagggctgg 478
Query: 608 ccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 528
>gb|CD231960.1|CD231960 SS1_31_G04.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_31_G04_A012 3', mRNA sequence
Length = 528
Score = 801 bits (404), Expect = 0.0
Identities = 499/527 (94%), Gaps = 4/527 (0%)
Strand = Plus / Plus
Query: 19 gatgaacattgatgatggccgtgttgctagcaacttcatctgctcaggctgtgcgcggtg 78
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||
Sbjct: 1 gatgaacattgatgatggccgtgttgttagcaacttcat-tgctcaggctgtgcgtggtg 59
Query: 79 agcccctgactgtccagaggccaggaacacagactaggagttttctgctatgttgccgat 138
| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct: 60 aacccctgactgtccagaggcccggaacacagactaggagctt-ctgctatgttgccgat 118
Query: 139 atggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggg 198
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 119 atggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggg 178
Query: 199 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccca 238
Query: 259 gatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggac 318
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 239 gatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgac 298
Query: 319 atcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttg 378
||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 299 atcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttg 358
Query: 379 gtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctga 438
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 359 gtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaa 418
Query: 439 attgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgt 498
| |||||||| ||||| ||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 419 actgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgt 476
Query: 499 cattatttgtggccacatttcattacggaatttgagttccaataaac 545
||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 477 cattattcgtggtcacatttcattacggaatttgagttccaataaac 523
>gb|CF427660.1|CF427660 PH1_10_E03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_10_E03_A002 3', mRNA sequence
Length = 565
Score = 795 bits (401), Expect = 0.0
Identities = 488/516 (94%), Gaps = 2/516 (0%)
Strand = Plus / Plus
Query: 142 gttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttggggaac 201
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1 gttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttggggaac 60
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagat 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagat 120
Query: 262 gtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatc 321
|| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 121 gtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatc 180
Query: 322 acaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtg 381
|||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 181 acaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtg 240
Query: 382 ctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaatt 441
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |
Sbjct: 241 ctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaact 300
Query: 442 gccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcat 501
||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 301 gccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcat 358
Query: 502 tatttgtggccacatttcattacggaatttgagttccaataaacttaatattcctttgtc 561
|||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 359 tattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacctttgtc 418
Query: 562 gttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtctct 621
|||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 419 gttccccttgaaggattgtattattagaattttcatacagggctggcagtttgagtctct 478
Query: 622 gcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||||||||||||||||||||||||||||||||||
Sbjct: 479 gcctacgcagatcttgtggtacttgtgtttgtagcc 514
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccatt 699
||||||||||||||||||||| ||||||
Sbjct: 531 agtcgattatagcaatgttgatgccatt 558
>gb|CD232578.1|CD232578 SS1_46_E09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_46_E09_A012 3', mRNA sequence
Length = 549
Score = 785 bits (396), Expect = 0.0
Identities = 486/515 (94%), Gaps = 2/515 (0%)
Strand = Plus / Plus
Query: 140 tggttgatggtcttattaagctgatgaatggaaacaagactggaccgattaacttgggga 199
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1 tggttgatggtcttattaagctgatgaatggaaacaacactgggccgattaacttgggga 60
Query: 200 acccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccag 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccag 120
Query: 260 atgtgacagtgacgatgaccgagaacactcctgatgacccccgccagaggaagccggaca 319
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 121 atgtaacagtgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgaca 180
Query: 320 tcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttgg 379
|||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct: 181 tcacaaaggcaaaggaagttttggggtgggagcccaagatcgtcctgaaggacggcttgg 240
Query: 380 tgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaa 439
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 241 tgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaa 300
Query: 440 ttgccctgcagttggggaagaatatccacacgggggagcatactcatagtcgggctcgtc 499
|||||||| ||||| ||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 301 ctgccctgcggttggcaaagaatatc--cacgggggagcatactcatagttgggttcgtc 358
Query: 500 attatttgtggccacatttcattacggaatttgagttccaataaacttaatattcctttg 559
|||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 359 attattcgtggtcacatttcattacggaatttgagttccaataaacggaatatacctttg 418
Query: 560 tcgttcaccttgaaggattgtattattagaattttcatacaaggctggccgttcgagtct 619
|||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||
Sbjct: 419 tcgttccccttgaaggattgtattattagaattttcatacagggctggcagtttgagtct 478
Query: 620 ctgcctacgcagatcttgtggtacttgtgtttgta 654
|||||||||||||||||||||||||||||||||||
Sbjct: 479 ctgcctacgcagatcttgtggtacttgtgtttgta 513
>gb|CF430423.1|CF430423 PH1_28_D01.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_D01_A002 3', mRNA sequence
Length = 571
Score = 773 bits (390), Expect = 0.0
Identities = 480/509 (94%), Gaps = 2/509 (0%)
Strand = Plus / Plus
Query: 149 gtcttattaagctgatgaatggaaacaagactggaccgattaacttggggaacccaggtg 208
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1 gtcttattaagctgatgaatggaaacaacactgggccgattaacttggggaacccaggtg 60
Query: 209 aattcaccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacag 268
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 aattctccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtaacag 120
Query: 269 tgacgatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaagg 328
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 121 tgacgatgaccgagaacactcctgatgatccccgccagaggaagcctgacatcacaaagg 180
Query: 329 cgaaggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatgg 388
| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 caaaggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatgg 240
Query: 389 aggatgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgc 448
||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||
Sbjct: 241 aggatgatttccgggagcgcctggccgtgcccaagaaaaccaaggcctaaactgccctgc 300
Query: 449 agttggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattatttgt 508
||||| ||||||||| |||||||| ||||||||||||| ||| ||||||||||| ||
Sbjct: 301 ggttggcaaagaatatc--cacgggggggcatactcatagttgggttcgtcattattcgt 358
Query: 509 ggccacatttcattacggaatttgagttccaataaacttaatattcctttgtcgttcacc 568
|| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 359 ggtcacatttcattacggaatttgagttccaataaacggaatatacctttgtcgttcacc 418
Query: 569 ttgaaggattgtattattagaattttcatacaaggctggccgttcgagtctctgcctacg 628
|||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||
Sbjct: 419 ttgaaggattgtattattagaattttcatacagggctggcagtttgagtctctgcctacg 478
Query: 629 cagatcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||||||
Sbjct: 479 cagatcttgtggtacttgtgtttgtagcc 507
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttgaggccattttgggctt 707
||||||||||||||||||||| ||||||||| ||||
Sbjct: 524 agtcgattatagcaatgttgatgccattttgagctt 559
>gb|CD207501.1|CD207501 HS1_33_C10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_33_C10_A012 3', mRNA sequence
Length = 536
Score = 765 bits (386), Expect = 0.0
Identities = 476/505 (94%), Gaps = 2/505 (0%)
Strand = Plus / Plus
Query: 153 tattaagctgatgaatggaaacaagactggaccgattaacttggggaacccaggtgaatt 212
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 tattaagctgatgaatggaaacaacactgggccgattaacttggggaacccaggtgaatt 60
Query: 213 caccatgctggaacttgctgagaatgtgaaggagttgatcaacccagatgtgacagtgac 272
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 caccatgctggaacttgttgagaatgtgaaggagttgatcaacccagatgtaacagtgac 120
Query: 273 gatgaccgagaacactcctgatgacccccgccagaggaagccggacatcacaaaggcgaa 332
||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 121 gatgaccgagaacactcttgatgatccccgccagaggaagcctgacatcacaaaggcaaa 180
Query: 333 ggaagttctgggatgggagcccaagatcgtcctgcgggacggcttggtgctcatggagga 392
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 ggaagttctggggtgggagcccaagatcgtcctgaaggacggcttggtgctcatggagga 240
Query: 393 tgatttccgggagcgcctgaccgtgcccaagaaaaccaaggcctgaattgccctgcagtt 452
||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |||
Sbjct: 241 tgatttccgggagcgcctgcccgtgcccaagaaaaccaaggcctaaactgccctgcggtt 300
Query: 453 ggggaagaatatccacacgggggagcatactcatagtcgggctcgtcattatttgtggcc 512
|| ||||||||| |||||||||||||||||||||| ||| ||||||||||| |||| |
Sbjct: 301 ggcaaagaatatc--cacgggggagcatactcatagttgggttcgtcattattcgtggtc 358
Query: 513 acatttcattacggaatttgagttccaataaacttaatattcctttgtcgttcaccttga 572
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 359 acatttcattacggaatttgagttccaataaacggaatatacctttgtcgttcaccttga 418
Query: 573 aggattgtattattagaattttcatacaaggctggccgttcgagtctctgcctacgcaga 632
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct: 419 aggattgtattattagaattttcatacagggctggcagtttgagtctctgcctacgcaga 478
Query: 633 tcttgtggtacttgtgtttgtagcc 657
|||||||||||||||||||||||||
Sbjct: 479 tcttgtggtacttgtgtttgtagcc 503
>gb|BI245782.1|BI245782 IP1_64_D01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 515
Score = 735 bits (371), Expect = 0.0
Identities = 449/474 (94%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 184 ccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaag 63
Query: 244 gagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgc 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 64 gagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgc 123
Query: 304 cagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtc 363
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 124 cagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtc 183
Query: 364 ctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaag 423
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 ctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaag 243
Query: 424 aaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatact 483
||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 244 aaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatact 301
Query: 484 catagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataa 543
|||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 302 catagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataa 361
Query: 544 acttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaagg 603
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 362 acggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacaggg 421
Query: 604 ctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 475
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 492 agtcgattatagcaatgttga 512
>gb|BE360625.1|BE360625 DG1_64_F10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 489
Score = 733 bits (370), Expect = 0.0
Identities = 455/480 (94%), Gaps = 4/480 (0%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcatctg 60
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 14 caacacctatgggcntaggatgaacattgatgatggccgtgttgttagcaacttcat-tg 72
Query: 61 ctcaggctgtgcgcggtgagcccctgactgtccagaggccaggaacacagactaggagtt 120
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct: 73 ctcaggctgtgcgtggtgaacccctgactgtccagaggcccggaacacagactaggagct 132
Query: 121 ttctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaagact 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 133 t-ctgctatgttgccgatatggttgatggtcttattaagctgatgaatggaaacaacact 191
Query: 181 ggaccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gggccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtg 251
Query: 241 aaggagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccc 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 252 aaggagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccc 311
Query: 301 cgccagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatc 360
|||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 312 cgccagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatc 371
Query: 361 gtcctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgccc 420
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 372 gtcctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgccc 431
Query: 421 aagaaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcat 480
|||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||
Sbjct: 432 aagaaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcat 489
>gb|BI098095.1|BI098095 IP1_32_A01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 497
Score = 733 bits (370), Expect = 0.0
Identities = 448/473 (94%), Gaps = 2/473 (0%)
Strand = Plus / Plus
Query: 185 cgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagg 60
Query: 245 agttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgcc 304
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 agttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgcc 120
Query: 305 agaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcc 364
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 121 agaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcc 180
Query: 365 tgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaaga 424
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaaga 240
Query: 425 aaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactc 484
|||||||||||| || |||||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 241 aaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactc 298
Query: 485 atagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaa 544
||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 299 atagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaa 358
Query: 545 cttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggc 604
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 359 cggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagggc 418
Query: 605 tggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 471
>gb|BG051935.1|BG051935 RHIZ2_6_G05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 497
Score = 729 bits (368), Expect = 0.0
Identities = 448/474 (94%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 184 ccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaag 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccgattaacttggggaacncaggtgaattcaccatgctggaacttgctgagaatgtgaag 62
Query: 244 gagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgc 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 63 gagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgc 122
Query: 304 cagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtc 363
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 123 cagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtc 182
Query: 364 ctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaag 423
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 183 ctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaag 242
Query: 424 aaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatact 483
||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 243 aaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatact 300
Query: 484 catagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataa 543
|||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 301 catagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataa 360
Query: 544 acttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaagg 603
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 acggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacaggg 420
Query: 604 ctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 474
>gb|BG052559.1|BG052559 RHIZ2_26_H05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 729 bits (368), Expect = 0.0
Identities = 448/474 (94%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 184 ccgattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaag 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgattaacttggggaacncaggtgaattcaccatgctggaacttgctgagaatgtgaag 60
Query: 244 gagttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgc 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gagttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgc 120
Query: 304 cagaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtc 363
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 121 cagaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtc 180
Query: 364 ctgcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaag 423
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 ctgaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaag 240
Query: 424 aaaaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatact 483
||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 241 aaaaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatact 298
Query: 484 catagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataa 543
|||||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 299 catagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataa 358
Query: 544 acttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaagg 603
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 359 acggaatatacctttgtcgttcaccttgaaggattgtattattagaattttcatacaggg 418
Query: 604 ctggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 472
>gb|AW285667.1|AW285667 LG1_319_H04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 493
Score = 724 bits (365), Expect = 0.0
Identities = 443/468 (94%), Gaps = 2/468 (0%)
Strand = Plus / Plus
Query: 190 aacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttg 60
Query: 250 atcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgccagagg 309
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 atcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgccagagg 120
Query: 310 aagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcctgcgg 369
||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| |
Sbjct: 121 aagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcctgaag 180
Query: 370 gacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaaaacc 429
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 gacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaaaacc 240
Query: 430 aaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactcatagt 489
||||||| || |||||||| ||||| ||||||||| ||||||||||||||||||||||
Sbjct: 241 aaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactcatagt 298
Query: 490 cgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaacttaa 549
||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 299 tgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaacggaa 358
Query: 550 tattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggctggcc 609
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 359 tatacctttgtcgttcaccttgaaggattgtattattagaattttcatacagggctggca 418
Query: 610 gttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 466
>gb|CD206846.1|CD206846 HS1_25_D03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_25_D03_A012 5', mRNA sequence
Length = 532
Score = 724 bits (365), Expect = 0.0
Identities = 446/472 (94%), Gaps = 2/472 (0%)
Strand = Plus / Minus
Query: 186 gattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gattaacttggggaacccaggtgaattcaccatgctggaacttgctgagaatgtgaagga 473
Query: 246 gttgatcaacccagatgtgacagtgacgatgaccgagaacactcctgatgacccccgcca 305
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 472 gttgatcaacccagatgtaacagtgacgatgaccgagaacactcctgatgatccccgcca 413
Query: 306 gaggaagccggacatcacaaaggcgaaggaagttctgggatgggagcccaagatcgtcct 365
||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 412 gaggaagcctgacatcacaaaggcaaaggaagttctggggtgggagcccaagatcgtcct 353
Query: 366 gcgggacggcttggtgctcatggaggatgatttccgggagcgcctgaccgtgcccaagaa 425
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 352 gaaggacggcttggtgctcatggaggatgatttccgggagcgcctggccgtgcccaagaa 293
Query: 426 aaccaaggcctgaattgccctgcagttggggaagaatatccacacgggggagcatactca 485
||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 292 aaccaaggcctaaactgccctgcggttggcaaagaatatc--cacgggggagcatactca 235
Query: 486 tagtcgggctcgtcattatttgtggccacatttcattacggaatttgagttccaataaac 545
|||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 234 tagttgggttcgtcattattcgtggtcacatttcattacggaatttgagttccaataaac 175
Query: 546 ttaatattcctttgtcgttcaccttgaaggattgtattattagaattttcatacaaggct 605
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 174 ggaatatacctttgtcgttcaccttgaaggattgtattattaggattttcatacagggct 115
Query: 606 ggccgttcgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 657
||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ggcagtttgagtctctgcctacgcagatcttgtggtacttgtgtttgtagcc 63
Score = 42.1 bits (21), Expect = 0.070
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 672 agtcgattatagcaatgttga 692
|||||||||||||||||||||
Sbjct: 46 agtcgattatagcaatgttga 26
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 160,103
Number of Sequences: 832831
Number of extensions: 160103
Number of successful extensions: 42119
Number of sequences better than 0.5: 100
Number of HSP's better than 0.5 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41725
Number of HSP's gapped (non-prelim): 232
length of query: 725
length of database: 491,359,669
effective HSP length: 20
effective length of query: 705
effective length of database: 474,703,049
effective search space: 334665649545
effective search space used: 334665649545
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)