BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738955.2.1
(1271 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 1279 0.0
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 1187 0.0
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 1072 0.0
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 1003 0.0
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 926 0.0
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 908 0.0
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 775 0.0
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 775 0.0
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 767 0.0
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 765 0.0
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 749 0.0
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 696 0.0
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 690 0.0
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 672 0.0
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 620 e-176
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 617 e-174
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 597 e-168
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 577 e-163
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 569 e-160
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 569 e-160
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 569 e-160
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 569 e-160
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 569 e-160
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 555 e-156
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 529 e-148
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 525 e-147
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 513 e-143
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 502 e-140
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 490 e-136
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 488 e-136
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 464 e-128
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 446 e-123
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 434 e-120
gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG... 426 e-117
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 418 e-115
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 414 e-114
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 394 e-108
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 391 e-106
gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stress... 367 2e-099
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 359 4e-097
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 357 2e-096
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 351 1e-094
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 351 1e-094
gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassino... 351 1e-094
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 349 4e-094
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 343 2e-092
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 337 2e-090
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 335 6e-090
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 327 1e-087
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 307 1e-081
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 303 2e-080
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 295 5e-078
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 283 2e-074
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 232 6e-059
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 232 6e-059
gb|BE361871.1|BE361871 DG1_82_G01.g1_A002 Dark Grown 1 (DG1... 216 4e-054
gb|BE596166.1|BE596166 PI1_50_D05.b1_A002 Pathogen induced ... 214 2e-053
gb|BG557821.1|BG557821 EM1_53_G02.b1_A002 Embryo 1 (EM1) So... 204 1e-050
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 198 9e-049
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 198 9e-049
gb|CD229951.1|CD229951 SS1_40_H09.b1_A012 Salt-stressed see... 176 3e-042
gb|CF429625.1|CF429625 PH1_23_G06.b1_A002 Phosphorous-defic... 176 3e-042
gb|CX620471.1|CX620471 GABR1_52_C02.b1_A002 GA- or brassino... 176 3e-042
gb|BE355609.1|BE355609 DG1_115_F11.g1_A002 Dark Grown 1 (DG... 174 1e-041
gb|BG102062.1|BG102062 RHIZ2_24_D04.g1_A003 Rhizome2 (RHIZ2... 174 1e-041
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 172 5e-041
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 163 5e-038
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 163 5e-038
gb|BG357140.1|BG357140 OV2_10_D01.b1_A002 Ovary 2 (OV2) Sor... 161 2e-037
gb|BI075536.1|BI075536 IP1_21_G05.g1_A002 Immature pannicle... 159 8e-037
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 157 3e-036
gb|CW071439.1|CW071439 104_323_10591520_114_30474 Sorghum m... 149 7e-034
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 149 7e-034
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 149 7e-034
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 149 7e-034
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 149 7e-034
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 149 7e-034
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 145 1e-032
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 145 1e-032
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 145 1e-032
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 145 1e-032
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 145 1e-032
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 141 2e-031
gb|BG557596.1|BG557596 EM1_53_G02.g1_A002 Embryo 1 (EM1) So... 141 2e-031
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 139 7e-031
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 133 4e-029
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 129 7e-028
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 129 7e-028
gb|CW416233.1|CW416233 fsbb001f116l03k0 Sorghum methylation... 129 7e-028
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 129 7e-028
gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorg... 129 7e-028
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 125 1e-026
gb|BI351300.1|BI351300 IP1_69_H01.b1_A002 Immature pannicle... 119 7e-025
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 115 1e-023
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 115 1e-023
gb|CW171728.1|CW171728 104_582_11155897_116_36529_005 Sorgh... 115 1e-023
gb|CN132615.1|CN132615 OX1_7_E09.b1_A002 Oxidatively-stress... 115 1e-023
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 113 4e-023
gb|BE125768.1|BE125768 DG1_57_A08.b1_A002 Dark Grown 1 (DG1... 109 6e-022
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 107 3e-021
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 107 3e-021
gb|CW061554.1|CW061554 104_305_10520462_114_30152 Sorghum m... 100 6e-019
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 98 2e-018
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 94 4e-017
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 94 4e-017
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 92 1e-016
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 92 1e-016
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 92 1e-016
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 92 1e-016
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 90 6e-016
gb|CD234947.1|CD234947 SS1_19_A02.b1_A012 Salt-stressed see... 90 6e-016
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 88 2e-015
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 88 2e-015
gb|CD462412.1|CD462412 ETH1_37_C09.g1_A002 Ethylene-treated... 86 9e-015
gb|BZ351153.1|BZ351153 hv19c03.g1 WGS-SbicolorF (JM107 adap... 84 4e-014
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 84 4e-014
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 84 4e-014
gb|CW355037.1|CW355037 fsbb001f019i03f0 Sorghum methylation... 84 4e-014
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 84 4e-014
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 84 4e-014
gb|CN135093.1|CN135093 OX1_30_C01.g1_A002 Oxidatively-stres... 84 4e-014
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 84 4e-014
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 82 1e-013
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 82 1e-013
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 82 1e-013
gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorgh... 80 6e-013
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 80 6e-013
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 80 6e-013
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 80 6e-013
gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) So... 80 6e-013
gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) So... 80 6e-013
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 80 6e-013
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 78 2e-012
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 78 2e-012
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 78 2e-012
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 78 2e-012
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 78 2e-012
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 78 2e-012
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 76 9e-012
gb|CW059495.1|CW059495 104_302_10519350_115_30168 Sorghum m... 74 4e-011
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 72 1e-010
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 72 1e-010
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 72 1e-010
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 72 1e-010
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 72 1e-010
gb|CW406941.1|CW406941 fsbb001f100d03k0 Sorghum methylation... 72 1e-010
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 72 1e-010
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 72 1e-010
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 72 1e-010
gb|CL192747.1|CL192747 104_415_10940458_114_32264_033 Sorgh... 70 5e-010
gb|CL192748.1|CL192748 104_415_10940458_116_32261_033 Sorgh... 70 5e-010
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 70 5e-010
gb|CW397754.1|CW397754 fsbb001f086o10f0 Sorghum methylation... 70 5e-010
gb|BG357287.1|BG357287 OV2_12_A12.b1_A002 Ovary 2 (OV2) Sor... 70 5e-010
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 68 2e-009
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 68 2e-009
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 68 2e-009
gb|CW379039.1|CW379039 fsbb001f058b16k0 Sorghum methylation... 68 2e-009
gb|CW406236.1|CW406236 fsbb001f099c15k0 Sorghum methylation... 66 9e-009
gb|CW059831.1|CW059831 104_303_10519536_1_30042 Sorghum met... 64 3e-008
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 64 3e-008
gb|CW126000.1|CW126000 104_506_11112648_116_34721_088 Sorgh... 64 3e-008
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 64 3e-008
gb|CW214761.1|CW214761 104_646_11194182_148_37053_017 Sorgh... 64 3e-008
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 64 3e-008
gb|CW320911.1|CW320911 104_814_11475263_148_35938_096 Sorgh... 64 3e-008
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 64 3e-008
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 64 3e-008
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 64 3e-008
gb|CW482454.1|CW482454 fsbb001f242i21k0 Sorghum methylation... 64 3e-008
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 64 3e-008
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 64 3e-008
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 62 1e-007
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 62 1e-007
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 62 1e-007
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 62 1e-007
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 60 5e-007
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 60 5e-007
gb|CW369378.1|CW369378 fsbb001f043m05f0 Sorghum methylation... 60 5e-007
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 60 5e-007
gb|BF421314.1|BF421314 FM1_7_B08.b1_A003 Floral-Induced Mer... 60 5e-007
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 58 2e-006
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 58 2e-006
gb|CW083025.1|CW083025 104_425_10944087_116_32356_060 Sorgh... 58 2e-006
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 58 2e-006
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 58 2e-006
gb|CW408700.1|CW408700 fsbb001f102l07f0 Sorghum methylation... 58 2e-006
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 58 2e-006
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 56 8e-006
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 56 8e-006
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 56 8e-006
gb|CW231486.1|CW231486 104_680_11211147_148_37339_004 Sorgh... 56 8e-006
gb|CW470839.1|CW470839 fsbb001f224e15k0 Sorghum methylation... 56 8e-006
gb|BG047968.1|BG047968 OV1_26_A06.g1_A002 Ovary 1 (OV1) Sor... 56 8e-006
gb|BG356953.1|BG356953 OV2_12_A12.g1_A002 Ovary 2 (OV2) Sor... 56 8e-006
gb|BG557254.1|BG557254 EM1_44_E12.g1_A002 Embryo 1 (EM1) So... 56 8e-006
gb|BG947272.1|BG947272 IP1_3_E11.b1_A002 Immature pannicle ... 56 8e-006
gb|BI099255.1|BI099255 IP1_40_E08.g1_A002 Immature pannicle... 56 8e-006
gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) So... 56 8e-006
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 54 3e-005
gb|CW140473.1|CW140473 104_531_11135799_116_34926_064 Sorgh... 54 3e-005
gb|CW140474.1|CW140474 104_531_11135799_148_34922_064 Sorgh... 54 3e-005
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 52 1e-004
gb|CL174842.1|CL174842 104_379_10891942_116_31769_310 Sorgh... 52 1e-004
gb|CW131067.1|CW131067 104_513_11115467_116_34780_034 Sorgh... 52 1e-004
gb|CW133303.1|CW133303 104_517_11116687_148_34814_032 Sorgh... 52 1e-004
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 52 1e-004
gb|CW397755.1|CW397755 fsbb001f086o10k0 Sorghum methylation... 52 1e-004
gb|CW478361.1|CW478361 fsbb001f236d08f0 Sorghum methylation... 52 1e-004
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 50 5e-004
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 50 5e-004
gb|CW384654.1|CW384654 fsbb001f067m11f0 Sorghum methylation... 50 5e-004
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 50 5e-004
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 50 5e-004
gb|CW032534.1|CW032534 104_261_10501433_115_30364 Sorghum m... 48 0.002
gb|CW294637.1|CW294637 104_775_11415292_116_36233_006 Sorgh... 48 0.002
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG713853.1|BG713853 EM1_20_F03.g2_A002 Embryo 1 (EM1) So... 48 0.002
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 48 0.002
gb|CL171844.1|CL171844 104_374_10889716_148_31774_004 Sorgh... 46 0.008
gb|CW204511.1|CW204511 104_632_11186581_148_36922_055 Sorgh... 46 0.008
gb|CW221658.1|CW221658 104_656_11198028_116_37169_034 Sorgh... 46 0.008
gb|BZ413005.1|BZ413005 203a3_20 Subclones from BAC clones m... 44 0.031
gb|CL155279.1|CL155279 104_341_10782016_116_31472_112 Sorgh... 44 0.031
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 44 0.031
gb|CL189564.1|CL189564 104_406_10902382_116_32474_081 Sorgh... 44 0.031
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 44 0.031
gb|CW208474.1|CW208474 104_638_11188691_148_36982_048 Sorgh... 44 0.031
gb|CW230207.1|CW230207 104_671_11207725_148_37263_049 Sorgh... 44 0.031
gb|CW260111.1|CW260111 104_726_11228790_116_35191_019 Sorgh... 44 0.031
gb|CW267474.1|CW267474 104_737_11400757_116_35291_051 Sorgh... 44 0.031
gb|CW345706.1|CW345706 104_848_11488642_148_36211_033 Sorgh... 44 0.031
gb|CW349738.1|CW349738 fsbb001f010l15k0 Sorghum methylation... 44 0.031
gb|CW433352.1|CW433352 fsbb001f148i13k0 Sorghum methylation... 44 0.031
gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorgh... 42 0.12
gb|CW032533.1|CW032533 104_261_10501433_114_30363 Sorghum m... 42 0.12
gb|CW088882.1|CW088882 104_434_10948378_115_32585_047 Sorgh... 42 0.12
gb|CW096538.1|CW096538 104_462_11001950_116_34349_059 Sorgh... 42 0.12
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 42 0.12
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 42 0.12
gb|CW179534.1|CW179534 104_593_11160150_148_36628_019 Sorgh... 42 0.12
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 42 0.12
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 42 0.12
gb|CW317087.1|CW317087 104_808_11473229_148_35857_019 Sorgh... 42 0.12
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 42 0.12
gb|CW421780.1|CW421780 fsbb001f130l24f0 Sorghum methylation... 42 0.12
gb|CW464658.1|CW464658 fsbb001f215a12k0 Sorghum methylation... 42 0.12
gb|BZ366787.1|BZ366787 ic99c10.b1 WGS-SbicolorF (JM107 adap... 40 0.49
gb|CL184115.1|CL184115 104_397_10898633_114_32380_077 Sorgh... 40 0.49
gb|CL186468.1|CL186468 104_401_10900228_116_32411_010 Sorgh... 40 0.49
gb|CW029838.1|CW029838 104_257_10499908_114_30401 Sorghum m... 40 0.49
gb|CW064373.1|CW064373 104_310_10522529_114_30141 Sorghum m... 40 0.49
gb|CW064374.1|CW064374 104_310_10522529_115_30146 Sorghum m... 40 0.49
gb|CW078820.1|CW078820 104_397_10898633_114_32360_077 Sorgh... 40 0.49
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 40 0.49
gb|CW235837.1|CW235837 104_691_11215242_116_37494_073 Sorgh... 40 0.49
gb|CW235838.1|CW235838 104_691_11215242_148_37495_073 Sorgh... 40 0.49
gb|CW247577.1|CW247577 104_708_11221850_116_36078_005 Sorgh... 40 0.49
gb|CW262163.1|CW262163 104_729_11229905_148_35203_069 Sorgh... 40 0.49
gb|CW321852.1|CW321852 104_815_11475776_116_35944_026 Sorgh... 40 0.49
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 40 0.49
gb|CW426190.1|CW426190 fsbb001f137h12f0 Sorghum methylation... 40 0.49
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 40 0.49
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 40 0.49
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 1279 bits (645), Expect = 0.0
Identities = 740/771 (95%), Gaps = 3/771 (0%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 838 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 779
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 778 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 719
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 718 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 659
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 599
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 598 ccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 539
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 479
Query: 806 ccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 865
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 419
Query: 866 ggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggc 925
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 418 ggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggc 359
Query: 926 acgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgt 985
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 358 acgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgt 299
Query: 986 tgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcc 1045
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 298 tgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcc 239
Query: 1046 cgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgt 1105
|||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 238 cgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggcgt 179
Query: 1106 gggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaagggagcagaagg 1165
||||||||||||| || |||||| ||||||||||||||||||||| |||||||||
Sbjct: 178 gggcgctctgccagccaccatagtcg---ccggccgcccggtgggcaaggaagcagaagg 122
Query: 1166 ctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
|||||||||||||||||||||| | | ||| ||| |||||||||||||
Sbjct: 121 ttgagcagagcaggaggagcaggacgttggcaaatgctgccattgtagcac 71
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 1187 bits (599), Expect = 0.0
Identities = 689/717 (96%), Gaps = 4/717 (0%)
Strand = Plus / Minus
Query: 501 gccgttgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggcc 560
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 787 gccgttgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggcc 728
Query: 561 gtcgaggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccaccc 620
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 727 gtcgaggagcgagttgctctgccagttctggccccagttccgggacatgggctgccaccc 668
Query: 621 ggtgctggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcac 680
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ggtgctggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcac 608
Query: 681 cagcaccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcac 740
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 607 cagcaccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcac 548
Query: 741 gcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggag 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggag 488
Query: 801 gaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccg-ccgtcgt 859
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 gaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgcccgtcgt 428
Query: 860 cgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccg 919
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 427 cgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccg 368
Query: 920 gcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgc 979
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 gcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgc 308
Query: 980 cgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtaca 1039
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 307 cgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtaca 248
Query: 1040 tgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacg 1099
|||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 247 tgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacg 188
Query: 1100 tggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaagggagc 1159
||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |||
Sbjct: 187 tggcgtgggcgctctgccagccgccatagt---cgccggccgcccggtgggcaaggaagc 131
Query: 1160 agaaggctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
|||||| |||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 130 agaaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 74
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 1072 bits (541), Expect = 0.0
Identities = 624/651 (95%), Gaps = 3/651 (0%)
Strand = Plus / Minus
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 705 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 646
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 586
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 585 ccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 526
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 466
Query: 806 ccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 865
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 406
Query: 866 ggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggc 925
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 405 ggaggccgtagttgggcgggcaaaagttggtggccgtcacggtgatggtgcccggcaggc 346
Query: 926 acgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgt 985
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 345 acgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgt 286
Query: 986 tgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcc 1045
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 285 tgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcc 226
Query: 1046 cgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgt 1105
|||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 225 cgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggcgt 166
Query: 1106 gggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaagggagcagaagg 1165
||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||
Sbjct: 165 gggcgctctgccagccgccatagt---cgccggccgcccggtgggcaaggaagcagaagg 109
Query: 1166 ctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
|||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 108 ttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 58
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 1003 bits (506), Expect = 0.0
Identities = 589/616 (95%), Gaps = 3/616 (0%)
Strand = Plus / Minus
Query: 601 cgggacatgggctgccacccggtgctggagcccttgatggacacggactgcacgtccccg 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 687 cgggacatgggctgccacccggtgctggagcccttgatggagacggactgcacgtccccg 628
Query: 661 gcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaac 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 627 gcgccggccacgttggtcaccagcaccaggttgatgtaggagtggccgttgatggtgaac 568
Query: 721 ctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcg 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cggatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcg 508
Query: 781 cggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcggg 840
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 507 cggtactgcgcgatctggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcggg 448
Query: 841 ttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggcc 388
Query: 901 gtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtag 960
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 387 gtcacggtgatggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtag 328
Query: 961 caggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtg 1020
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 caggacccgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtg 268
Query: 1021 ccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcg 1080
||||||||||||||||||||||||||||| || ||| |||||||||| ||||| ||||||
Sbjct: 267 ccgtaccccgtgctgtacatgttcccgtacccacacacgccgcccattgtgccggacgcg 208
Query: 1081 tcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggcc 1140
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 207 tcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgccggcc 151
Query: 1141 gcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggcactagcagct 1200
||||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||||
Sbjct: 150 gcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagct 91
Query: 1201 gccgccattgtagcac 1216
|| |||||||||||||
Sbjct: 90 gctgccattgtagcac 75
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 926 bits (467), Expect = 0.0
Identities = 494/503 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 503 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 444
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 384
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 324
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 264
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 263 ccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 204
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 144
Query: 806 ccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 865
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccggctgcgccatgtccaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 84
Query: 866 ggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggc 925
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 83 ggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggc 24
Query: 926 acgactgcccgttgttgtcgcag 948
|||||||||||| ||||||||||
Sbjct: 23 acgactgcccgtcgttgtcgcag 1
Score = 111 bits (56), Expect = 2e-022
Identities = 78/84 (92%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 317 gaaggaaatgcctaagcgggtgctaat-aataagcagcctcggaatggcgggagcctctt 375
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct: 655 gaaggaaatgcctaagcgggtgctaattaacaagcagcctcggaatggcgggagcctcct 596
Query: 376 ctttactacagcgaagaaggtttc 399
|||||| ||| |||||| ||||||
Sbjct: 595 ctttacaacaacgaagagggtttc 572
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 908 bits (458), Expect = 0.0
Identities = 532/556 (95%), Gaps = 3/556 (0%)
Strand = Plus / Minus
Query: 661 gcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaac 573
Query: 721 ctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcg 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cggatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcg 513
Query: 781 cggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcggg 840
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 512 cggtactgcgcgatctggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcggg 453
Query: 841 ttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggcc 393
Query: 901 gtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtag 960
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 392 gtcacggtgatggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtag 333
Query: 961 caggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtg 1020
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 332 caggacccgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtg 273
Query: 1021 ccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcg 1080
||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 272 ccgtaccccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccggacgcg 213
Query: 1081 tcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggcc 1140
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 212 tcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgccggcc 156
Query: 1141 gcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggcactagcagct 1200
||||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||||
Sbjct: 155 gcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagct 96
Query: 1201 gccgccattgtagcac 1216
|| |||||||||||||
Sbjct: 95 gctgccattgtagcac 80
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 542
Score = 775 bits (391), Expect = 0.0
Identities = 462/485 (95%), Gaps = 3/485 (0%)
Strand = Plus / Minus
Query: 732 cttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgc 483
Query: 792 gatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagcc 851
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatctggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagcc 423
Query: 852 gccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgat 911
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 422 gccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgat 363
Query: 912 ggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgca 971
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 362 ggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgca 303
Query: 972 cgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgt 1031
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 302 cgccgcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgt 243
Query: 1032 gctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgcc 1091
|||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 242 gctgtacatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgcc 183
Query: 1092 gtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggc 1151
||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||
Sbjct: 182 gtagaacgtggcgtgggcgctctgccagccgccatagt---cgccggccgcccggtgggc 126
Query: 1152 aagggagcagaaggctgagcagagcaggaggagcagggcactagcagctgccgccattgt 1211
|||| ||||||||| |||||||||||||||||||||| | | |||||||| ||||||||
Sbjct: 125 aaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgt 66
Query: 1212 agcac 1216
|||||
Sbjct: 65 agcac 61
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 775 bits (391), Expect = 0.0
Identities = 465/489 (95%), Gaps = 3/489 (0%)
Strand = Plus / Minus
Query: 728 cgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtact 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtact 486
Query: 788 gcgcgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcacc 847
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 485 gcgcgatctggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcacc 426
Query: 848 agccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacgg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 425 agccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacgg 366
Query: 908 tgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacc 967
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 365 tgatggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacc 306
Query: 968 cgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtacc 1027
||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 305 cgcacgccgcgccgccgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtacc 246
Query: 1028 ccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgc 1087
|||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||
Sbjct: 245 ccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgc 186
Query: 1088 cgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggt 1147
||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 185 cgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgccggccgcccggt 129
Query: 1148 gggcaagggagcagaaggctgagcagagcaggaggagcagggcactagcagctgccgcca 1207
|||||||| ||||||||| |||||||||||||||||||||| | | |||||||| ||||
Sbjct: 128 gggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgcca 69
Query: 1208 ttgtagcac 1216
|||||||||
Sbjct: 68 ttgtagcac 60
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 767 bits (387), Expect = 0.0
Identities = 461/485 (95%), Gaps = 3/485 (0%)
Strand = Plus / Minus
Query: 732 cttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgc 480
Query: 792 gatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagcc 851
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gatctggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagcc 420
Query: 852 gccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgat 911
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 419 gccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgat 360
Query: 912 ggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgca 971
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 359 ggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgca 300
Query: 972 cgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgt 1031
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 299 cgccgcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgt 240
Query: 1032 gctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgcc 1091
|||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 239 gctgtacatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgcc 180
Query: 1092 gtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggc 1151
|||||||||||||||||| |||||||| ||| |||| |||||||||||||||||||
Sbjct: 179 gtagaacgtggcgtgggcactctgccatccgccatagt---cgccggccgcccggtgggc 123
Query: 1152 aagggagcagaaggctgagcagagcaggaggagcagggcactagcagctgccgccattgt 1211
|||| ||||||||| |||||||||||||||||||||| | | |||||||| ||||||||
Sbjct: 122 aaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgt 63
Query: 1212 agcac 1216
|||||
Sbjct: 62 agcac 58
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 765 bits (386), Expect = 0.0
Identities = 457/480 (95%), Gaps = 3/480 (0%)
Strand = Plus / Minus
Query: 737 tcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatct 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatct 489
Query: 797 ggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgt 856
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgt 429
Query: 857 cgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgc 916
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 428 cgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgc 369
Query: 917 ccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcgg 976
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 368 ccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccg 309
Query: 977 cgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgt 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 308 cgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgt 249
Query: 1037 acatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtaga 1096
||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 248 acatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtaga 189
Query: 1097 acgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaaggg 1156
|||||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 188 acgtggcgtgggcgctctgccagccgccatagt---cgccggccgcccggtgggcaagga 132
Query: 1157 agcagaaggctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
||||||||| |||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 131 agcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 72
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 749 bits (378), Expect = 0.0
Identities = 455/480 (94%), Gaps = 3/480 (0%)
Strand = Plus / Minus
Query: 737 tcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatct 796
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcacgcacggcacctccctgtaggcgacgggcacgatgccggcgcggtactgcgcgatct 482
Query: 797 ggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgt 856
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaggaaggccggctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgt 422
Query: 857 cgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgc 916
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 421 cgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgc 362
Query: 917 ccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcgg 976
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 361 ccggcaggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccg 302
Query: 977 cgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgt 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 301 cgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgt 242
Query: 1037 acatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtaga 1096
||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 241 acatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtaga 182
Query: 1097 acgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaaggg 1156
|||||||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 181 acgtggcgtgggcgctctgccagccgccatagt---cgccggccgcccggtgggcaagga 125
Query: 1157 agcagaaggctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
||||||||| |||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 124 agcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 65
>gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_A06_A002 5', mRNA sequence
Length = 520
Score = 696 bits (351), Expect = 0.0
Identities = 422/445 (94%), Gaps = 3/445 (0%)
Strand = Plus / Minus
Query: 772 atgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcggg 831
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 520 atgccggcgcggtactgcgcgatctggaggaaggccggctgcgccatgtcgaagtgcggg 461
Query: 832 cgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaag 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcagaag 401
Query: 892 ttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgc 951
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 400 ttggtggccgtcacggtgatggtgcccggcaggcacgactgcccgtcgttgtcgcagcgc 341
Query: 952 agctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgcc 1011
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 340 agctcgtagcaggacccgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccgcc 281
Query: 1012 gtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtg 1071
||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 280 gtgttcgtgccgtaccccgtgctgtacatgttcccgtacccacacgcgccgcccattgtg 221
Query: 1072 ccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcg 1131
|| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 220 ccggacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt-- 163
Query: 1132 acgccggccgcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggca 1191
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
Sbjct: 162 -cgccggccgcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcaggacg 104
Query: 1192 ctagcagctgccgccattgtagcac 1216
| |||||||| |||||||||||||
Sbjct: 103 ttggcagctgctgccattgtagcac 79
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 690 bits (348), Expect = 0.0
Identities = 433/460 (94%), Gaps = 1/460 (0%)
Strand = Plus / Minus
Query: 670 acgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaacctgatcccg 729
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||
Sbjct: 646 acgttggtcaccagcaccaggttgaagtaggagtgcccgttgatggtgaaccggatgccg 587
Query: 730 cccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgc 789
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 586 cccttcttcacgcacggcactctcctgaaggcgacgggcacgatgccggcgcggtactgc 527
Query: 790 gcgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccag 849
||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 526 gcgatgtggaggaaggcgggctcggccatgtcgaagtgcggccgcggcgggttgcaccag 467
Query: 850 ccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtg 909
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 466 ccgccgtcgtcgctggggaggccgtagttgggagggcagaagttggtggccgtcacggtg 407
Query: 910 atggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccg 969
||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 406 atggtgcccggcaggcacgaccgcccggcgttgtcgcaccgcagctcgtagcaggacccg 347
Query: 970 cacgcggcgccgtcgttgaacagcgccgtg-ctcagcgccgccgtgttggtgccgtaccc 1028
||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 346 cacgccgcgccgtcgttgaacagcgccgtgnctcagcgccgccgtgttcgtgccgtaccc 287
Query: 1029 cgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgcc 1088
|||||||||| ||| ||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 286 ggtgctgtacaggttgccgtacccgcacgcgccgcccattgtgccggacgcgtcgccgcc 227
Query: 1089 gccgtagaacgtggcgtgggcgctctgccacgagccgtag 1128
|||||||||||||||||| |||||||||||| |||||||
Sbjct: 226 gccgtagaacgtggcgtgcgcgctctgccacccgccgtag 187
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 672 bits (339), Expect = 0.0
Identities = 360/367 (98%)
Strand = Plus / Minus
Query: 551 ggctctggccgtcgaggagcgagttgctctgccagttctggccccagttgcgggacatgg 610
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 605 ggctctggccgtcgaggagcgagttgctctgccagttctggccccagttccgggacatgg 546
Query: 611 gctgccacccggtgctggagcccttgatggacacggactgcacgtccccggcgccggcca 670
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 545 gctgccacccggtgctggagcccttgatggagacggactgcacgtccccggcgccggcca 486
Query: 671 cgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaacctgatcccgc 730
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 485 cgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaaccggatcccgc 426
Query: 731 ccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcg 790
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccttcttcacgcatggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcg 366
Query: 791 cgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagc 850
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgatctggaggaaggccggttgcgccatgtcgaagtgcgggcgcggcgggttgcaccagc 306
Query: 851 cgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtga 910
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 305 cgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtga 246
Query: 911 tggtgcc 917
|||||||
Sbjct: 245 tggtgcc 239
Score = 252 bits (127), Expect = 7e-065
Identities = 183/201 (91%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 1016 tggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccag 1075
|||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |
Sbjct: 245 tggtgccgtaccccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccgg 186
Query: 1076 acgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgc 1135
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct: 185 acgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgc 129
Query: 1136 cggccgcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggcactag 1195
|||||||||||||||||||| ||||||||| |||||||||||||||||||||| | | |
Sbjct: 128 cggccgcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttgg 69
Query: 1196 cagctgccgccattgtagcac 1216
||||||| |||||||||||||
Sbjct: 68 cagctgctgccattgtagcac 48
>gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D09_A002 5', mRNA sequence
Length = 779
Score = 620 bits (313), Expect = e-176
Identities = 381/403 (94%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 719
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 718 tagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggcacgactgc 659
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 658 ccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgttgaacagc 599
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 598 gccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcccgtaccca 539
Query: 1054 cacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctc 1113
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggcgtgggcgctc 479
Query: 1114 tgccacgagccgtagtcgacgccggccgcccggtgggcaagggagcagaaggctgagcag 1173
||||| ||| |||| ||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 478 tgccagccgccatagt---cgccggccgcccggtgggcaaggaagcagaaggttgagcag 422
Query: 1174 agcaggaggagcagggcactagcagctgccgccattgtagcac 1216
||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 421 agcaggaggagcaggacgttggcagctgctgccattgtagcac 379
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 617 bits (311), Expect = e-174
Identities = 392/419 (93%)
Strand = Plus / Minus
Query: 710 tgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggca 769
|||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 607 tgatggtgaaccggatgccgcccttcttcacgcacggcactctcctgaaggcgacgggca 548
Query: 770 cgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcg 829
||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||
Sbjct: 547 cgatgccggcgcggtactgcgcgatgtggaggaaggcgggctcggccatgtcgaagtgcg 488
Query: 830 ggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcaga 889
| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 487 gccgcggcgggttgcaccagccgccgttgtcgctggggaggccgtagttgggagggcaga 428
Query: 890 agttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagc 949
||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct: 427 agttggtggccgtcacggtgatggtgcccggcaggcacgaccgcccggcgttgtcgcacc 368
Query: 950 gcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccg 1009
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 367 gcagcttgtagcaggacccgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccg 308
Query: 1010 ccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcg 1069
||||||| ||||||||||| |||||||||| ||| ||||| ||||||||||||||||| |
Sbjct: 307 ccgtgttcgtgccgtacccggtgctgtacaggttgccgtacccgcacgcgccgcccattg 248
Query: 1070 tgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtag 1128
|||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 247 tgccggacgcgtcgccgccgccgtagaacgtggcgtgcgcgctctgccacccgccgtag 189
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 597 bits (301), Expect = e-168
Identities = 370/393 (94%)
Strand = Plus / Minus
Query: 736 ttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatc 795
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttcacgcacggcactctcctgaaggcgacgggcacgatgccggcgcggtactgcgcgatg 522
Query: 796 tggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccg 855
||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 521 tggaggaaggcgggctcggccatgtcgaagtgcggccgcggcgggttgcaccagccgccg 462
Query: 856 tcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtg 915
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 461 tcgtcgctggggaggccgtagttgggagggcagaagttggtggccgtcacggtgatggtg 402
Query: 916 cccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcg 975
||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 401 cccggcaggcacgaccgcccggcgttgtcgcaccgcagctcgtagcaggacccgcacgcc 342
Query: 976 gcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctg 1035
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 341 gcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctg 282
Query: 1036 tacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtag 1095
|||| ||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 281 tacaggttgccgtacccgcacgcgccgcccattgtgccggacgcgtcgccgccgccgtag 222
Query: 1096 aacgtggcgtgggcgctctgccacgagccgtag 1128
||||||||||| |||||||||||| |||||||
Sbjct: 221 aacgtggcgtgcgcgctctgccacccgccgtag 189
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 577 bits (291), Expect = e-163
Identities = 357/379 (94%)
Strand = Plus / Minus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 557 cctcctgaaggcgacgggcacgatgccggcgcggtactgcgcgatgtggaggaaggcggg 498
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctcggccatgtcgaagtgcggccgcggcgggttgcaccagccgccgtcgtcgctggggag 438
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 437 gccgtagttgggagggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 378
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 377 ccgcccggcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 318
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgta 1049
||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||
Sbjct: 317 cagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctgtacaggttgccgta 258
Query: 1050 gccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggc 1109
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 257 cccgcacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggcgtgcgc 198
Query: 1110 gctctgccacgagccgtag 1128
|||||||||| |||||||
Sbjct: 197 gctctgccacccgccgtag 179
>gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 715
Score = 569 bits (287), Expect = e-160
Identities = 302/307 (98%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 173 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 232
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 233 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 292
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 293 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 352
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 412
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 413 ccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 472
Query: 746 gcaccct 752
|||||||
Sbjct: 473 gcaccct 479
Score = 111 bits (56), Expect = 2e-022
Identities = 78/84 (92%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 317 gaaggaaatgcctaagcgggtgctaat-aataagcagcctcggaatggcgggagcctctt 375
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct: 21 gaaggaaatgcctaagcgggtgctaattaacaagcagcctcggaatggcgggagcctcct 80
Query: 376 ctttactacagcgaagaaggtttc 399
|||||| ||| |||||| ||||||
Sbjct: 81 ctttacaacaacgaagagggtttc 104
>gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 550
Score = 569 bits (287), Expect = e-160
Identities = 308/315 (97%)
Strand = Plus / Minus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 350
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 290
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 289 gccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 230
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 ctgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 170
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgta 1049
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 169 cagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcccgta 110
Query: 1050 gccgcacgcgccgcc 1064
|| |||||||||||
Sbjct: 109 cccacacgcgccgcc 95
>gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 719
Score = 569 bits (287), Expect = e-160
Identities = 302/307 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 708 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 649
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 648 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 589
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 588 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 529
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 469
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 468 ccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 409
Query: 746 gcaccct 752
|||||||
Sbjct: 408 gcaccct 402
>gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i03, DNA
sequence
Length = 641
Score = 569 bits (287), Expect = e-160
Identities = 308/315 (97%)
Strand = Plus / Plus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 285
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 345
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 346 gccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 405
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 406 ctgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 465
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgta 1049
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 466 cagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcccgta 525
Query: 1050 gccgcacgcgccgcc 1064
|| |||||||||||
Sbjct: 526 cccacacgcgccgcc 540
>gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d01, DNA
sequence
Length = 642
Score = 569 bits (287), Expect = e-160
Identities = 308/315 (97%)
Strand = Plus / Plus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 89
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 ctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 149
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 150 gccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 209
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 210 ctgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 269
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgta 1049
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 270 cagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgttcccgta 329
Query: 1050 gccgcacgcgccgcc 1064
|| |||||||||||
Sbjct: 330 cccacacgcgccgcc 344
Score = 174 bits (88), Expect = 1e-041
Identities = 138/154 (89%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 467 cccattgtgccggacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccg 526
Query: 1123 ccgtagtcgacgccggccgcccggtgggcaagggagcagaaggctgagcagagcaggagg 1182
|| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 527 ccatagt---cgccggccgcccggtgggcaaggaagcagaaggttgagcagagcaggagg 583
Query: 1183 agcagggcactagcagctgccgccattgtagcac 1216
|||||| | | |||||||| |||||||||||||
Sbjct: 584 agcaggacgttggcagctgctgccattgtagcac 617
>gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499499, DNA
sequence
Length = 624
Score = 555 bits (280), Expect = e-156
Identities = 308/316 (97%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 360
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgcgccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 420
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 gccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 480
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 ctgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 540
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgta-ccccgtgctgtacatgttcccgt 1048
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 541 cagcgccgtgctcagcgccgccgtgttcgtgccgtacccccgtgctgtacatgttcccgt 600
Query: 1049 agccgcacgcgccgcc 1064
| || |||||||||||
Sbjct: 601 acccacacgcgccgcc 616
>gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 503
Score = 529 bits (267), Expect = e-148
Identities = 297/307 (96%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 150 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 209
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 210 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 269
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 329
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||| || |||||||||||||||||||||||||||||||||
Sbjct: 330 tggagcccttgatggagacggggtgggcgtccccggcgccggccacgttggtcaccagca 389
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 390 ccaggttgaagtaagagtggccgttgatggtgaaccggatcccgcccttcttcacgcacg 449
Query: 746 gcaccct 752
|||||||
Sbjct: 450 gcaccct 456
Score = 105 bits (53), Expect = 1e-020
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 320 ggaaatgcctaagcgggtgctaataat-aagcagcctcggaatggcgggagcctcttctt 378
|||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 1 ggaaatgcctaagcgggtgctaatcatcaagcagcctcggaatggcgggagcctcctctt 60
Query: 379 tactacagcgaagaaggtttc 399
||| ||| |||||| ||||||
Sbjct: 61 tacaacaacgaagagggtttc 81
>gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_23_G06_A002 5', mRNA sequence
Length = 443
Score = 525 bits (265), Expect = e-147
Identities = 333/355 (93%), Gaps = 3/355 (0%)
Strand = Plus / Minus
Query: 862 ctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggc 921
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 ctggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggc 384
Query: 922 aggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccg 981
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 383 aggcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccg 324
Query: 982 tcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatg 1041
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 tcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatg 264
Query: 1042 ttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtg 1101
|||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 263 ttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtg 204
Query: 1102 gcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaagggagcag 1161
||||||||||||||||| ||| |||| ||||||||||||||||||||||| |||||
Sbjct: 203 gcgtgggcgctctgccagccgccatagt---cgccggccgcccggtgggcaaggaagcag 147
Query: 1162 aaggctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
|||| |||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 146 aaggttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 92
>gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 411
Score = 513 bits (259), Expect = e-143
Identities = 330/353 (93%), Gaps = 3/353 (0%)
Strand = Plus / Minus
Query: 864 ggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcag 923
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 411 ggggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggtgcccggcag 352
Query: 924 gcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtc 983
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 gcacgactgcccgtcgttgtcgcagcgcagctcgtagcaggacccgcacgccgcgccgtc 292
Query: 984 gttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgtt 1043
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 291 gttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtaccccgtgctgtacatgtt 232
Query: 1044 cccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggc 1103
|||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 231 cccgtacccacacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggc 172
Query: 1104 gtgggcgctctgccacgagccgtagtcgacgccggccgcccggtgggcaagggagcagaa 1163
|||||| |||||||| ||| |||| ||||||||||||||||||||||| |||||||
Sbjct: 171 gtgggcactctgccatccgccatagt---cgccggccgcccggtgggcaaggaagcagaa 115
Query: 1164 ggctgagcagagcaggaggagcagggcactagcagctgccgccattgtagcac 1216
|| |||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct: 114 ggttgagcagagcaggaggagcaggacgttggcagctgctgccattgtagcac 62
>gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 3', mRNA sequence
Length = 731
Score = 502 bits (253), Expect = e-140
Identities = 277/285 (97%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 285 gctaaaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 226
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 225 tgctggtgacggtgcggccgtcgctggcggtgacctgaaaggagaggctctggccgtcga 166
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 165 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 106
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 46
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgc 730
|||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 45 ccaggttgaaataggagtggccgttgatggtgaaccggatcccgc 1
Score = 176 bits (89), Expect = 3e-042
Identities = 288/347 (82%), Gaps = 28/347 (8%)
Strand = Plus / Minus
Query: 73 tagaccataaacaagcattgatgttcacggtcccaaaaggtgcaatccccacaaacatct 132
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 692 tagaccataaacaagcattattgttcacggtcgtgcaa--tgcaatccccacaaacatct 635
Query: 133 cccaccaccatgtggccagattcgggggttgctactag-tacagcgtaacaacacaataa 191
|||||| |||||||||| |||||||||| | | |||| ||||| ||||||||| ||
Sbjct: 634 cccacc-ccatgtggccggattcggggggt--tgctagctacagggtaacaacaaaa--- 581
Query: 192 gttgcacgacaccactcccctgca----gccctacaataaacagccttgcaggtttttgt 247
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 580 gttacacgacaccactcccctgcatctagccctacaatattcagccttgcaggtttttgt 521
Query: 248 tttgc-----ttaacccattgctacaa-------tcactggtgcagaaaataaacagctc 295
||| | |||||||| |||||||| |||| ||||||||| |||| ||||
Sbjct: 520 ttttccttaattaacccaatgctacaacaatcactcaccggtgcagaacttaaatagctt 461
Query: 296 aatcctat--ggtaataataagagaaggaaatgcctaagcgggtgctaat-aataagcag 352
|||||||| | | || || || ||||||||||||||||||||||||||| || ||||||
Sbjct: 460 aatcctatatgatgatgatcagggaaggaaatgcctaagcgggtgctaattaacaagcag 401
Query: 353 cctcggaatggcgggagcctcttctttactacagcgaagaaggtttc 399
||||||||||||||||||||| ||||||| ||| |||||| ||||||
Sbjct: 400 cctcggaatggcgggagcctcctctttacaacaacgaagagggtttc 354
>gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 634
Score = 490 bits (247), Expect = e-136
Identities = 298/315 (94%)
Strand = Plus / Minus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 354 cctcctgaaggcgacgggcacgatgccggcgcggtactgcgcgatgtggaggaaggcggg 295
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctcggccatgtcgaagtgcggccgcggcgggttgcaccagccgccgtcgtcgctggggag 235
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 234 gccgtagttgggagggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 175
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 174 ccgcccggcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 115
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgta 1049
||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||
Sbjct: 114 cagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctgtacaggttgccgta 55
Query: 1050 gccgcacgcgccgcc 1064
||||||||||||||
Sbjct: 54 cccgcacgcgccgcc 40
>gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 508
Score = 488 bits (246), Expect = e-136
Identities = 308/329 (93%)
Strand = Plus / Minus
Query: 800 ggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgt 859
||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 508 ggaaggcgggctcggccatgtcgaagtgcggccgcggcgggttgcaccagccgccgtcgt 449
Query: 860 cgctggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccg 919
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 448 cgctggggaggccgtagttgggagggcagaagttggtggccgtcacggtgatggtgcccg 389
Query: 920 gcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgc 979
||||||||||| ||| | ||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 388 gcaggcacgaccgccnggcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgc 329
Query: 980 cgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtaca 1039
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 328 cgtcgttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctgtaca 269
Query: 1040 tgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacg 1099
||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 268 ggttgccgtacccgcacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacg 209
Query: 1100 tggcgtgggcgctctgccacgagccgtag 1128
||||||| |||||||||||| |||||||
Sbjct: 208 tggcgtgcgcgctctgccacccgccgtag 180
>gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 464 bits (234), Expect = e-128
Identities = 276/290 (95%)
Strand = Plus / Minus
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 306 cctcctgaaggcgacgggcacgatgccggcgcggtactgcgcgatgtggaggaaggcggg 247
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctcggccatgtcgaagtgcggccgcggcgggttgcaccagccgccgtcgtcgctggggag 187
Query: 870 gccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacga 929
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 186 gccgtagttgggagggcagaagttggtggccgtcacggtgatggtgcccggcaggcacga 127
Query: 930 ctgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaa 989
| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 126 ccgcccggcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgccgtcgttgaa 67
Query: 990 cagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtaca 1039
||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 66 cagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctgtaca 17
>gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 3', mRNA sequence
Length = 699
Score = 446 bits (225), Expect = e-123
Identities = 237/241 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 182
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 122
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 62
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcaccagca 2
Query: 686 c 686
|
Sbjct: 1 c 1
Score = 176 bits (89), Expect = 3e-042
Identities = 288/347 (82%), Gaps = 28/347 (8%)
Strand = Plus / Minus
Query: 73 tagaccataaacaagcattgatgttcacggtcccaaaaggtgcaatccccacaaacatct 132
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 648 tagaccataaacaagcattattgttcacggtcgtgcaa--tgcaatccccacaaacatct 591
Query: 133 cccaccaccatgtggccagattcgggggttgctactag-tacagcgtaacaacacaataa 191
|||||| |||||||||| |||||||||| | | |||| ||||| ||||||||| ||
Sbjct: 590 cccacc-ccatgtggccggattcggggggt--tgctagctacagggtaacaacaaaa--- 537
Query: 192 gttgcacgacaccactcccctgca----gccctacaataaacagccttgcaggtttttgt 247
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 536 gttacacgacaccactcccctgcatctagccctacaatattcagccttgcaggtttttgt 477
Query: 248 tttgc-----ttaacccattgctacaa-------tcactggtgcagaaaataaacagctc 295
||| | |||||||| |||||||| |||| ||||||||| |||| ||||
Sbjct: 476 ttttccttaattaacccaatgctacaacaatcactcaccggtgcagaacttaaatagctt 417
Query: 296 aatcctat--ggtaataataagagaaggaaatgcctaagcgggtgctaat-aataagcag 352
|||||||| | | || || || ||||||||||||||||||||||||||| || ||||||
Sbjct: 416 aatcctatatgatgatgatcagggaaggaaatgcctaagcgggtgctaattaacaagcag 357
Query: 353 cctcggaatggcgggagcctcttctttactacagcgaagaaggtttc 399
||||||||||||||||||||| ||||||| ||| |||||| ||||||
Sbjct: 356 cctcggaatggcgggagcctcctctttacaacaacgaagagggtttc 310
>gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f237l21, DNA
sequence
Length = 522
Score = 434 bits (219), Expect = e-120
Identities = 244/251 (97%), Gaps = 1/251 (0%)
Strand = Plus / Minus
Query: 503 cgttgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgt 562
||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 522 cgttgctggtgacggtgcgcccgtcgctggcggtgacctggaaggagaggctctgcccgt 463
Query: 563 cgaggagcgagttgctctgcc-agttctggccccagttgcgggacatgggctgccacccg 621
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 462 cgaggagcgagttgctctgcccagttctggccccagttccgggacatgggctgccacccg 403
Query: 622 gtgctggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcacc 681
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtgctggagcccttgatggagacggactgcacgtccccggcgccggccacgttggtcacc 343
Query: 682 agcaccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacg 741
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 342 agcaccaggttgaagtaggagtggccgttgatggtgaaccggatcccgcccttcttcacg 283
Query: 742 cacggcaccct 752
|||||||||||
Sbjct: 282 cacggcaccct 272
>gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 387
Score = 426 bits (215), Expect = e-117
Identities = 296/321 (92%), Gaps = 4/321 (1%)
Strand = Plus / Minus
Query: 897 ggccgtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctc 956
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 387 ggccgtcacggtgatggtgcccggcaggcacgactgcccgtcgttgtcgcagcgcagatc 328
Query: 957 gtagcaggacccgcacgcggcgccgtcgttgaacagcg-ccgtgctcagcgccgccgtgt 1015
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 327 gtagcaggacccgcacgccgcgccgtcgttgaacagcgaccgtgctcagcgccgccgtgt 268
Query: 1016 tggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccag 1075
| |||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |
Sbjct: 267 tcgtgccgtaccccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccgg 208
Query: 1076 acgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgc 1135
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct: 207 acgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgc 151
Query: 1136 cggccgcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggcactag 1195
|||||||||||||||||||| ||||||||| ||||||||||||||||||||| | | |
Sbjct: 150 cggccgcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcagcacgttgg 91
Query: 1196 cagctgccgccattgtagcac 1216
||||||| |||||||||||||
Sbjct: 90 cagctgctgccattgtagcac 70
>gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_19_A02_A012 5', mRNA sequence
Length = 372
Score = 418 bits (211), Expect = e-115
Identities = 286/309 (92%), Gaps = 4/309 (1%)
Strand = Plus / Minus
Query: 909 gatggtgcccggcaggcacgactgcccgttgtt-gtcgcagcgcagctcgtagcaggacc 967
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 372 gatggtgcccggcaggcacgactgcccgtcgtttgtcgcagcgcagctcgtagcaggacc 313
Query: 968 cgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtacc 1027
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 312 cgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccgcagtgttcgtgccgtacc 253
Query: 1028 ccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgc 1087
|||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||
Sbjct: 252 ccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccggacgcgtcgccgc 193
Query: 1088 cgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggccgcccggt 1147
||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 192 cgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgccggccgcccggt 136
Query: 1148 gggcaagggagcagaaggctgagcagagcaggaggagcagggcactagcagctgccgcca 1207
|||||||| ||||||||| |||||||||||||||||||||| | | |||||||| ||||
Sbjct: 135 gggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttggcagctgctgcca 76
Query: 1208 ttgtagcac 1216
|||||||||
Sbjct: 75 ttgtagcac 67
>gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F03_A002 3', mRNA sequence
Length = 680
Score = 414 bits (209), Expect = e-114
Identities = 224/229 (97%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 229 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 170
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 169 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcaa 110
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 109 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 50
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgtt 674
|||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 49 tggagcccttgatggagacggactgcacgtccccggcgccggccacgtt 1
Score = 168 bits (85), Expect = 8e-040
Identities = 287/347 (82%), Gaps = 28/347 (8%)
Strand = Plus / Minus
Query: 73 tagaccataaacaagcattgatgttcacggtcccaaaaggtgcaatccccacaaacatct 132
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 636 tagaccataaacaagcattattgttcacggtcgtgcaa--tgcaatccccacaaacatct 579
Query: 133 cccaccaccatgtggccagattcgggggttgctactag-tacagcgtaacaacacaataa 191
|||||| |||||||||| |||||||||| | | |||| ||||| ||||||||| ||
Sbjct: 578 cccacc-ccatgtggccggattcggggggt--tgctagctacagggtaacaacaaaa--- 525
Query: 192 gttgcacgacaccactcccctgca----gccctacaataaacagccttgcaggtttttgt 247
||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 524 gttacacgacaccactcccctgcatctagccctacaatattcagccttgcagatttttgt 465
Query: 248 tttgc-----ttaacccattgctacaa-------tcactggtgcagaaaataaacagctc 295
||| | |||||||| |||||||| |||| ||||||||| |||| ||||
Sbjct: 464 ttttccttaattaacccaatgctacaacaatcactcaccggtgcagaacttaaatagctt 405
Query: 296 aatcctat--ggtaataataagagaaggaaatgcctaagcgggtgctaat-aataagcag 352
|||||||| | | || || || ||||||||||||||||||||||||||| || ||||||
Sbjct: 404 aatcctatatgatgatgatcagggaaggaaatgcctaagcgggtgctaattaacaagcag 345
Query: 353 cctcggaatggcgggagcctcttctttactacagcgaagaaggtttc 399
||||||||||||||||||||| ||||||| ||| |||||| ||||||
Sbjct: 344 cctcggaatggcgggagcctcctctttacaacaacgaagagggtttc 298
>gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 648
Score = 394 bits (199), Expect = e-108
Identities = 211/215 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 215 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 156
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 155 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 96
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 95 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 36
Query: 626 tggagcccttgatggacacggactgcacgtccccg 660
|||||||||||||||| ||||||||||||||||||
Sbjct: 35 tggagcccttgatggagacggactgcacgtccccg 1
Score = 176 bits (89), Expect = 3e-042
Identities = 288/347 (82%), Gaps = 28/347 (8%)
Strand = Plus / Minus
Query: 73 tagaccataaacaagcattgatgttcacggtcccaaaaggtgcaatccccacaaacatct 132
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 622 tagaccataaacaagcattattgttcacggtcgtgcaa--tgcaatccccacaaacatct 565
Query: 133 cccaccaccatgtggccagattcgggggttgctactag-tacagcgtaacaacacaataa 191
|||||| |||||||||| |||||||||| | | |||| ||||| ||||||||| ||
Sbjct: 564 cccacc-ccatgtggccggattcggggggt--tgctagctacagggtaacaacaaaa--- 511
Query: 192 gttgcacgacaccactcccctgca----gccctacaataaacagccttgcaggtttttgt 247
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 510 gttacacgacaccactcccctgcatctagccctacaatattcagccttgcaggtttttgt 451
Query: 248 tttgc-----ttaacccattgctacaa-------tcactggtgcagaaaataaacagctc 295
||| | |||||||| |||||||| |||| ||||||||| |||| ||||
Sbjct: 450 ttttccttaattaacccaatgctacaacaatcactcaccggtgcagaacttaaatagctt 391
Query: 296 aatcctat--ggtaataataagagaaggaaatgcctaagcgggtgctaat-aataagcag 352
|||||||| | | || || || ||||||||||||||||||||||||||| || ||||||
Sbjct: 390 aatcctatatgatgatgatcagggaaggaaatgcctaagcgggtgctaattaacaagcag 331
Query: 353 cctcggaatggcgggagcctcttctttactacagcgaagaaggtttc 399
||||||||||||||||||||| ||||||| ||| |||||| ||||||
Sbjct: 330 cctcggaatggcgggagcctcctctttacaacaacgaagagggtttc 284
>gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 444
Score = 391 bits (197), Expect = e-106
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 864 ggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcag 923
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 ggggaggccgtagttgggagggcagaagttggtggccgtcacggtgatggtgcccggcag 385
Query: 924 gcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtc 983
||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 384 gcacgaccgcccggcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgccgtc 325
Query: 984 gttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgtt 1043
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||
Sbjct: 324 gttgaacagcgccgtgctcagcgccgccgtgttcgtgccgtacccggtgctgtacaggtt 265
Query: 1044 cccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggc 1103
||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 264 gccgtacccgcacgcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggc 205
Query: 1104 gtgggcgctctgccacgagccgtag 1128
||| |||||||||||| |||||||
Sbjct: 204 gtgcgcgctctgccacccgccgtag 180
>gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_7_E09_A002 5', mRNA sequence
Length = 675
Score = 367 bits (185), Expect = 2e-099
Identities = 250/271 (92%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 946 cagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagc 1005
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 675 cagcgcagctcgtagcaggacccgcacgccgcgctgtcgttgaacagcgccgtgctcagc 616
Query: 1006 gccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgccc 1065
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 615 gccgccgtgttcgtgccgtaccccgtgctgtacatgttcccgtacccacacgcgccgccc 556
Query: 1066 atcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccg 1125
|| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 555 attgtgccggacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccgcca 496
Query: 1126 tagtcgacgccggccgcccggtgggcaagggagcagaaggctgagcagagcaggaggagc 1185
|||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 495 tagt---cgccggccgcccggtgggcaaggaagcagaaggttgagcagagcaggaggagc 439
Query: 1186 agggcactagcagctgccgccattgtagcac 1216
||| | | |||||||| |||||||||||||
Sbjct: 438 aggacgttggcagctgctgccattgtagcac 408
>gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 3', mRNA sequence
Length = 685
Score = 359 bits (181), Expect = 4e-097
Identities = 190/193 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 193 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 134
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 133 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 74
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 73 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 14
Query: 626 tggagcccttgat 638
|||||||||||||
Sbjct: 13 tggagcccttgat 1
Score = 176 bits (89), Expect = 3e-042
Identities = 288/347 (82%), Gaps = 28/347 (8%)
Strand = Plus / Minus
Query: 73 tagaccataaacaagcattgatgttcacggtcccaaaaggtgcaatccccacaaacatct 132
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 600 tagaccataaacaagcattattgttcacggtcgtgcaa--tgcaatccccacaaacatct 543
Query: 133 cccaccaccatgtggccagattcgggggttgctactag-tacagcgtaacaacacaataa 191
|||||| |||||||||| |||||||||| | | |||| ||||| ||||||||| ||
Sbjct: 542 cccacc-ccatgtggccggattcggggggt--tgctagctacagggtaacaacaaaa--- 489
Query: 192 gttgcacgacaccactcccctgca----gccctacaataaacagccttgcaggtttttgt 247
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 488 gttacacgacaccactcccctgcatctagccctacaatattcagccttgcaggtttttgt 429
Query: 248 tttgc-----ttaacccattgctacaa-------tcactggtgcagaaaataaacagctc 295
||| | |||||||| |||||||| |||| ||||||||| |||| ||||
Sbjct: 428 ttttccttaattaacccaatgctacaacaatcactcaccggtgcagaacttaaatagctt 369
Query: 296 aatcctat--ggtaataataagagaaggaaatgcctaagcgggtgctaat-aataagcag 352
|||||||| | | || || || ||||||||||||||||||||||||||| || ||||||
Sbjct: 368 aatcctatatgatgatgatcagggaaggaaatgcctaagcgggtgctaattaacaagcag 309
Query: 353 cctcggaatggcgggagcctcttctttactacagcgaagaaggtttc 399
||||||||||||||||||||| ||||||| ||| |||||| ||||||
Sbjct: 308 cctcggaatggcgggagcctcctctttacaacaacgaagagggtttc 262
>gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 437
Score = 357 bits (180), Expect = 2e-096
Identities = 234/252 (92%)
Strand = Plus / Minus
Query: 877 ttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccg 936
||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 437 ttgggagggcagaagttggtggccgtcacggtgatggtgcccggcaggcacgacctcccg 378
Query: 937 ttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgcc 996
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 377 gcgttgtcgcaccgcagctcgtagcaggacccgcacgccgcgccgtcgttgaacagcgcc 318
Query: 997 gtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcac 1056
|||||||||||||||||||| ||||||||||| |||||||||| ||| ||||| ||||||
Sbjct: 317 gtgctcagcgccgccgtgttcgtgccgtacccggtgctgtacaggttgccgtacccgcac 258
Query: 1057 gcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgc 1116
||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 257 gcgccgcccattgtgccggacgcgtcgccgccgccgtagaacgtggcgtgcgcgctctgc 198
Query: 1117 cacgagccgtag 1128
||| |||||||
Sbjct: 197 cacccgccgtag 186
>gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137329, DNA
sequence
Length = 593
Score = 351 bits (177), Expect = 1e-094
Identities = 270/301 (89%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||||||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 557 agaactgggcgccctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 498
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 497 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 438
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 437 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 378
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 377 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 318
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 317 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacgcacggca 258
Query: 749 c 749
|
Sbjct: 257 c 257
>gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 692
Score = 351 bits (177), Expect = 1e-094
Identities = 270/301 (89%)
Strand = Plus / Plus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||||||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 197 agaactgggcgccctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 256
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 257 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 316
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 317 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 376
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 377 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 436
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 437 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacgcacggca 496
Query: 749 c 749
|
Sbjct: 497 c 497
>gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_F03_A002 5', mRNA sequence
Length = 322
Score = 351 bits (177), Expect = 1e-094
Identities = 239/259 (92%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 958 tagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttg 1017
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagcaggacccgcacgccgcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttc 263
Query: 1018 gtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagac 1077
|||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||
Sbjct: 262 gtgccgtaccccgtgctgtacatgttcccgtacccacacgcgccgcccattgtgccggac 203
Query: 1078 gcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccg 1137
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 202 gcgtcgccgccgccgtagaacgtggcgtgggcgctctgccagccgccatagt---cgccg 146
Query: 1138 gccgcccggtgggcaagggagcagaaggctgagcagagcaggaggagcagggcactagca 1197
|||||||||||||||||| ||||||||| |||||||||||||||||||||| | | |||
Sbjct: 145 gccgcccggtgggcaaggaagcagaaggttgagcagagcaggaggagcaggacgttggca 86
Query: 1198 gctgccgccattgtagcac 1216
||||| |||||||||||||
Sbjct: 85 gctgctgccattgtagcac 67
>gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 588
Score = 349 bits (176), Expect = 4e-094
Identities = 185/188 (98%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 188 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggcgcgacgccgt 129
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 128 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 69
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 68 ggagcgagttgctctgccagttctggccccagttccgggacatgggctgccacccggtgc 9
Query: 626 tggagccc 633
||||||||
Sbjct: 8 tggagccc 1
Score = 174 bits (88), Expect = 1e-041
Identities = 257/307 (83%), Gaps = 26/307 (8%)
Strand = Plus / Minus
Query: 113 tgcaatccccacaaacatctcccaccaccatgtggccagattcgggggttgctactag-t 171
|||||||||||||||||||||||||| |||||||||| |||||||||| | | |||| |
Sbjct: 562 tgcaatccccacaaacatctcccacc-ccatgtggccggattcggggggt--tgctagct 506
Query: 172 acagcgtaacaacacaataagttgcacgacaccactcccctgca----gccctacaataa 227
|||||||||||||| || ||| |||||||||||||||||||| |||||||||||
Sbjct: 505 acagcgtaacaacaaaa---gttacacgacaccactcccctgcatctagccctacaatat 449
Query: 228 acagccttgcaggtttttgttttgc-----ttaacccattgctacaa-------tcactg 275
|||||||||||||||||||||| | |||||||| |||||||| |||| |
Sbjct: 448 tcagccttgcaggtttttgtttttccttaattaacccaatgctacaacaatcactcaccg 389
Query: 276 gtgcagaaaataaacagctcaatcc--tatggtaataataagagaaggaaatgcctaagc 333
|||||||| |||| |||| ||||| |||| | || || || |||||||||||||||||
Sbjct: 388 gtgcagaacttaaatagcttaatcctatatgatgatgatcagggaaggaaatgcctaagc 329
Query: 334 gggtgctaa-taataagcagcctcggaatggcgggagcctcttctttactacagcgaaga 392
||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||| ||||||
Sbjct: 328 gggtgctaattaacaagcagcctcggaatggcgggagcctcctctttacaacaacgaaga 269
Query: 393 aggtttc 399
||||||
Sbjct: 268 gggtttc 262
>gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 766
Score = 343 bits (173), Expect = 2e-092
Identities = 269/301 (89%)
Strand = Plus / Plus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||| ||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 95 agaactgggcgtcctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 154
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 155 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 214
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 215 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 274
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 275 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 334
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 335 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacgcacggca 394
Query: 749 c 749
|
Sbjct: 395 c 395
>gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519350, DNA
sequence
Length = 558
Score = 337 bits (170), Expect = 2e-090
Identities = 263/294 (89%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||||||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 294 agaactgggcgccctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 235
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 234 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 175
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 174 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 115
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 114 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 55
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgc 742
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct: 54 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacgc 1
>gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 673
Score = 335 bits (169), Expect = 6e-090
Identities = 262/293 (89%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||||||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 293 agaactgggcgccctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 234
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 233 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 174
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 173 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 114
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 113 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 54
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacg 741
|||||||||||||||| |||||||||||||||| ||| |||||||||||||||
Sbjct: 53 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacg 1
>gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070m01, DNA
sequence
Length = 339
Score = 327 bits (165), Expect = 1e-087
Identities = 267/301 (88%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||||||||||||||||| ||||||| |||||| || || || ||| || |||||
Sbjct: 316 agaactgggcgccctcgaaggtatggccgagctgccatccggcgggggcggcgttgttgc 257
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| | ||| |||
Sbjct: 256 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgccggtccaggt 197
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 196 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 137
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 136 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 77
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 76 ggttgaagtaggagtgcccgttgatggtgaaccggatgccgcccttcttcacgcacggca 17
Query: 749 c 749
|
Sbjct: 16 c 16
>gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 664
Score = 307 bits (155), Expect = 1e-081
Identities = 242/271 (89%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
||||||||||||||||||||||||||||||||||||| || || || ||| || |||||
Sbjct: 271 agaactgggcgccctcgaaggtctggccgaactgccatccggcgggggcggcgttgttgc 212
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||
Sbjct: 211 tggtgacggtgcggccgtcgctggcggtgacctggaacgacagcgcctgcccgtccaggt 152
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|| ||||||||||||||||||||||||||| || ||||||||||||||||| || | |
Sbjct: 151 ccgcgttgctctgccagttctggccccagttccgcgacatgggctgccaccccgtccgcg 92
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 91 agccccggatggagacggaccgcacgtcccccgcgcccgccacgttggtcaccagcacca 32
Query: 689 ggttgaagtaggagtggccgttgatggtgaa 719
|||||||||||||||| ||||||||||||||
Sbjct: 31 ggttgaagtaggagtgcccgttgatggtgaa 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 502,769
Number of Sequences: 832831
Number of extensions: 502769
Number of successful extensions: 138735
Number of sequences better than 0.5: 264
Number of HSP's better than 0.5 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137942
Number of HSP's gapped (non-prelim): 691
length of query: 1271
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1251
effective length of database: 474,703,049
effective search space: 593853514299
effective search space used: 593853514299
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)