BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.645
(1154 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN152418.1|CN152418 WOUND1_81_H09.g1_A002 Wounded leaves... 969 0.0
gb|CF487936.1|CF487936 POL1_46_G01.g1_A002 Pollen Sorghum b... 908 0.0
gb|CN126040.1|CN126040 RHOH1_14_G06.g1_A002 Acid- and alkal... 878 0.0
gb|CN152333.1|CN152333 WOUND1_81_H09.b1_A002 Wounded leaves... 821 0.0
gb|BG649163.1|BG649163 EM1_77_B11.g1_A002 Embryo 1 (EM1) So... 797 0.0
gb|CF487849.1|CF487849 POL1_46_G01.b1_A002 Pollen Sorghum b... 735 0.0
gb|BG933591.1|BG933591 OV1_32_B11.g1_A002 Ovary 1 (OV1) Sor... 722 0.0
gb|BG103298.1|BG103298 RHIZ2_18_C12.b1_A003 Rhizome2 (RHIZ2... 708 0.0
gb|BG103114.1|BG103114 RHIZ2_18_C12.g1_A003 Rhizome2 (RHIZ2... 702 0.0
gb|AW678569.1|AW678569 WS1_16_H06.g1_A002 Water-stressed 1 ... 696 0.0
gb|BE918770.1|BE918770 OV1_4_G09.b1_A002 Ovary 1 (OV1) Sorg... 694 0.0
gb|BG240609.1|BG240609 OV1_32_B11.b1_A002 Ovary 1 (OV1) Sor... 692 0.0
gb|CF428517.1|CF428517 PH1_15_D09.g1_A002 Phosphorous-defic... 680 0.0
gb|BG560038.1|BG560038 RHIZ2_68_F08.b1_A003 Rhizome2 (RHIZ2... 650 0.0
gb|AW678507.1|AW678507 WS1_16_H06.b1_A002 Water-stressed 1 ... 646 0.0
gb|BE362353.1|BE362353 DG1_86_C10.b1_A002 Dark Grown 1 (DG1... 636 e-180
gb|BE918513.1|BE918513 OV1_4_G09.g1_A002 Ovary 1 (OV1) Sorg... 634 e-180
gb|CD429217.1|CD429217 ETH1_3_E01.b1_A002 Ethylene-treated ... 634 e-180
gb|BM329969.1|BM329969 PIC1_45_E10.g1_A002 Pathogen-infecte... 632 e-179
gb|CN125950.1|CN125950 RHOH1_14_G06.b1_A002 Acid- and alkal... 632 e-179
gb|BM324198.1|BM324198 PIC1_25_E08.b1_A002 Pathogen-infecte... 626 e-177
gb|CD213543.1|CD213543 HS1_41_B02.g1_A012 Heat-shocked seed... 626 e-177
gb|BG052778.1|BG052778 RHIZ2_14_G07.g1_A003 Rhizome2 (RHIZ2... 622 e-176
gb|BM325519.1|BM325519 PIC1_45_E10.b1_A002 Pathogen-infecte... 617 e-174
gb|BG052841.1|BG052841 RHIZ2_14_G07.b1_A003 Rhizome2 (RHIZ2... 613 e-173
gb|BE594510.1|BE594510 PI1_34_B09.b1_A002 Pathogen induced ... 607 e-171
gb|BI643592.1|BI643592 DG1_90_D06.b1_A002 Dark Grown 1 (DG1... 599 e-169
gb|BE366520.1|BE366520 PI1_34_B09.g1_A002 Pathogen induced ... 595 e-168
gb|BF422248.1|BF422248 FM1_13_A06.b1_A003 Floral-Induced Me... 525 e-147
gb|CD213453.1|CD213453 HS1_41_B02.b1_A012 Heat-shocked seed... 511 e-143
gb|BE358248.1|BE358248 DG1_27_C08.b2_A002 Dark Grown 1 (DG1... 507 e-142
gb|BF480817.1|BF480817 FM1_14_C08.b1_A003 Floral-Induced Me... 498 e-139
gb|CF428434.1|CF428434 PH1_15_D09.b1_A002 Phosphorous-defic... 496 e-138
gb|BG050679.1|BG050679 FM1_71_D10.g1_A003 Floral-Induced Me... 488 e-136
gb|BG558764.1|BG558764 RHIZ2_56_C04.b1_A003 Rhizome2 (RHIZ2... 476 e-132
gb|BE593246.1|BE593246 WS1_99_D04.g1_A002 Water-stressed 1 ... 472 e-131
gb|BE593660.1|BE593660 WS1_99_D04.b1_A002 Water-stressed 1 ... 472 e-131
gb|BM328700.1|BM328700 PIC1_25_E08.g1_A002 Pathogen-infecte... 466 e-129
gb|AI724706.1|AI724706 RHIZ1_26_A01.y2_A001 Rhizome1 (RHIZ1... 450 e-124
gb|BF422195.1|BF422195 FM1_13_A06.g1_A003 Floral-Induced Me... 448 e-124
gb|CF758342.1|CF758342 DSAF1_30_F02.g1_A011 Drought-stresse... 396 e-108
gb|CF758951.1|CF758951 DSAF1_38_E04.g1_A011 Drought-stresse... 359 4e-097
gb|BG050836.1|BG050836 FM1_71_D10.b1_A003 Floral-Induced Me... 353 2e-095
gb|CF760153.1|CF760153 DSAF1_56_B06.b1_A011 Drought-stresse... 323 2e-086
gb|CF761777.1|CF761777 DSAF1_80_G06.g1_A011 Drought-stresse... 323 2e-086
gb|CN129864.1|CN129864 RHOH1_37_H08.g1_A002 Acid- and alkal... 323 2e-086
gb|CN127366.1|CN127366 RHOH1_22_D02.g3_A002 Acid- and alkal... 317 1e-084
gb|CN145357.1|CN145357 WOUND1_28_A05.g1_A002 Wounded leaves... 317 1e-084
gb|CN134988.1|CN134988 OX1_29_G07.g1_A002 Oxidatively-stres... 315 5e-084
gb|BF480866.1|BF480866 FM1_14_C08.g1_A003 Floral-Induced Me... 313 2e-083
gb|CF487781.1|CF487781 POL1_45_H06.g1_A002 Pollen Sorghum b... 313 2e-083
gb|CN127579.1|CN127579 RHOH1_23_G08.g3_A002 Acid- and alkal... 313 2e-083
gb|CN127730.1|CN127730 RHOH1_24_E11.g3_A002 Acid- and alkal... 313 2e-083
gb|CN141622.1|CN141622 OX1_52_G05.g1_A002 Oxidatively-stres... 313 2e-083
gb|BE362922.2|BE362922 DG1_90_D06.g1_A002 Dark Grown 1 (DG1... 311 8e-083
gb|CN150657.1|CN150657 WOUND1_70_D10.g1_A002 Wounded leaves... 305 5e-081
gb|CW233972.1|CW233972 104_687_11213731_148_37378_072 Sorgh... 299 3e-079
gb|CD225983.1|CD225983 CCC1_42_H01.g1_A007 Callus culture/c... 283 2e-074
gb|CD223692.1|CD223692 CCC1_29_G04.g1_A007 Callus culture/c... 281 7e-074
gb|CF483652.1|CF483652 POL1_23_F10.g1_A002 Pollen Sorghum b... 281 7e-074
gb|CN141131.1|CN141131 OX1_49_B05.g1_A002 Oxidatively-stres... 274 2e-071
gb|CD225652.1|CD225652 CCC1_40_B09.g1_A007 Callus culture/c... 268 1e-069
gb|BE125018.1|BE125018 DG1_14_E01.b1_A002 Dark Grown 1 (DG1... 264 2e-068
gb|CD226282.1|CD226282 CCC1_44_H01.g1_A007 Callus culture/c... 264 2e-068
gb|BM317857.1|BM317857 OV1_16_D06.b9_A002 Ovary 1 (OV1) Sor... 250 2e-064
gb|BG560580.1|BG560580 RHIZ2_59_B09.b1_A003 Rhizome2 (RHIZ2... 244 2e-062
gb|CN129784.1|CN129784 RHOH1_37_H08.b1_A002 Acid- and alkal... 242 6e-062
gb|BG273447.1|BG273447 OV2_25_G11.b1_A002 Ovary 2 (OV2) Sor... 234 1e-059
gb|BG649559.1|BG649559 EM1_80_H04.b1_A002 Embryo 1 (EM1) So... 234 1e-059
gb|CN141046.1|CN141046 OX1_49_B05.b1_A002 Oxidatively-stres... 234 1e-059
gb|CN127646.1|CN127646 RHOH1_24_E11.b1_A002 Acid- and alkal... 228 9e-058
gb|AW677872.1|AW677872 WS1_11_F10.g1_A002 Water-stressed 1 ... 216 3e-054
gb|BG559552.1|BG559552 RHIZ2_68_F08.g1_A003 Rhizome2 (RHIZ2... 212 5e-053
gb|BG649161.1|BG649161 EM1_77_A12.g1_A002 Embryo 1 (EM1) So... 210 2e-052
gb|CN127492.1|CN127492 RHOH1_23_G08.b1_A002 Acid- and alkal... 210 2e-052
gb|BM326454.1|BM326454 PIC1_57_C04.b1_A002 Pathogen-infecte... 198 8e-049
gb|CW148563.1|CW148563 104_547_11142021_148_35008_091 Sorgh... 178 8e-043
gb|CN134909.1|CN134909 OX1_29_G07.b1_A002 Oxidatively-stres... 178 8e-043
gb|CN150583.1|CN150583 WOUND1_70_D10.b1_A002 Wounded leaves... 168 7e-040
gb|CN145286.1|CN145286 WOUND1_28_A05.b2_A002 Wounded leaves... 163 4e-038
gb|CW106335.1|CW106335 104_475_11013357_148_34460_081 Sorgh... 145 1e-032
gb|CW233971.1|CW233971 104_687_11213731_116_37377_072 Sorgh... 143 4e-032
gb|AW924340.1|AW924340 WS1_52_C05.b1_A002 Water-stressed 1 ... 143 4e-032
gb|BE355050.1|BE355050 DG1_10_A02.b1_A002 Dark Grown 1 (DG1... 143 4e-032
gb|BE355030.1|BE355030 DG1_10_A02.g1_A002 Dark Grown 1 (DG1... 143 4e-032
gb|CD225552.1|CD225552 CCC1_40_B09.b1_A007 Callus culture/c... 143 4e-032
gb|CD225877.1|CD225877 CCC1_42_H01.b1_A007 Callus culture/c... 143 4e-032
gb|AW680375.1|AW680375 WS1_52_C05.g1_A002 Water-stressed 1 ... 139 6e-031
gb|BG048295.1|BG048295 OV1_16_D06.g1_A002 Ovary 1 (OV1) Sor... 137 3e-030
gb|CD223584.1|CD223584 CCC1_29_G04.b1_A007 Callus culture/c... 135 1e-029
gb|CN141541.1|CN141541 OX1_52_G05.b1_A002 Oxidatively-stres... 135 1e-029
gb|BF655616.1|BF655616 FM1_46_D09.b1_A003 Floral-Induced Me... 133 4e-029
gb|CF434049.1|CF434049 NIT1_31_E11.g1_A002 Nitrogen-deficie... 119 6e-025
gb|CW148562.1|CW148562 104_547_11142021_116_35012_091 Sorgh... 109 6e-022
gb|CD429325.1|CD429325 ETH1_3_C01.g1_A002 Ethylene-treated ... 96 9e-018
gb|CD226179.1|CD226179 CCC1_44_H01.b1_A007 Callus culture/c... 84 3e-014
gb|CL160960.1|CL160960 104_352_10805381_114_31826_053 Sorgh... 82 1e-013
gb|CL173652.1|CL173652 104_377_10891026_148_31792_162 Sorgh... 82 1e-013
gb|CL177482.1|CL177482 104_384_10893858_148_31915_306 Sorgh... 82 1e-013
gb|CW230864.1|CW230864 104_679_11210817_116_37331_033 Sorgh... 82 1e-013
gb|CW230865.1|CW230865 104_679_11210817_148_37335_033 Sorgh... 82 1e-013
gb|CW074592.1|CW074592 104_349_10804346_116_31382_170 Sorgh... 80 5e-013
gb|CL173651.1|CL173651 104_377_10891026_116_31793_162 Sorgh... 74 3e-011
gb|BG273312.1|BG273312 OV2_25_G11.g1_A002 Ovary 2 (OV2) Sor... 72 1e-010
gb|BM330840.1|BM330840 PIC1_57_C04.g1_A002 Pathogen-infecte... 72 1e-010
gb|CW468359.1|CW468359 fsbb001f220i02f0 Sorghum methylation... 70 5e-010
gb|CF769974.1|CF769974 DSBF1_5_A06.b1_A010 Drought-stressed... 68 2e-009
gb|AW285106.1|AW285106 LG1_300_F09.g1_A002 Light Grown 1 (L... 60 5e-007
gb|CF770886.1|CF770886 DSBF1_11_A12.g1_A010 Drought-stresse... 60 5e-007
gb|AI724742.1|AI724742 RHIZ1_26_E07.y2_A001 Rhizome1 (RHIZ1... 56 7e-006
gb|CF483093.1|CF483093 POL1_11_F02.b1_A002 Pollen Sorghum b... 56 7e-006
gb|DV162820.1|DV162820 P3-G6 Sorghum bicolor greenbug-respo... 52 1e-004
gb|DV162795.1|DV162795 P1-M15 Sorghum bicolor greenbug-resp... 50 5e-004
gb|DV162819.2|DV162819 P5-B11 Sorghum bicolor greenbug-resp... 50 5e-004
gb|DR831552.2|DR831552 MT106 Sorghum bicolor greenbug-respo... 46 0.007
gb|CN127676.1|CN127676 RHOH1_24_A03.g3_A002 Acid- and alkal... 44 0.028
gb|DV162819.1|DV162819 P5-B11 Sorghum bicolor greenbug-resp... 44 0.028
gb|DV162821.1|DV162821 P2-F11 Sorghum bicolor greenbug-resp... 44 0.028
gb|DV162821.2|DV162821 P2-F11 Sorghum bicolor greenbug-resp... 44 0.028
gb|CW092991.1|CW092991 104_455_10999502_114_33046_049 Sorgh... 42 0.11
gb|CW303988.1|CW303988 104_788_11465534_116_35692_051 Sorgh... 42 0.11
gb|CW388393.1|CW388393 fsbb001f073c06k0 Sorghum methylation... 42 0.11
gb|BG240156.1|BG240156 OV1_18_E12.b1_A002 Ovary 1 (OV1) Sor... 42 0.11
gb|BG357812.1|BG357812 OV2_30_F01.b1_A002 Ovary 2 (OV2) Sor... 42 0.11
gb|CD213100.1|CD213100 HS1_28_H07.g1_A012 Heat-shocked seed... 42 0.11
gb|CW039018.1|CW039018 104_271_10505250_115_30388 Sorghum m... 40 0.44
gb|CW210400.1|CW210400 104_640_11189775_148_37429_050 Sorgh... 40 0.44
gb|CW321883.1|CW321883 104_815_11475792_116_35944_090 Sorgh... 40 0.44
gb|CW364344.1|CW364344 fsbb001f036f14f0 Sorghum methylation... 40 0.44
gb|CW364345.1|CW364345 fsbb001f036f14k0 Sorghum methylation... 40 0.44
gb|CW368412.1|CW368412 fsbb001f042f21f0 Sorghum methylation... 40 0.44
gb|CW454981.1|CW454981 fsbb001f199k18k0 Sorghum methylation... 40 0.44
gb|CW460042.1|CW460042 fsbb001f207b08f0 Sorghum methylation... 40 0.44
gb|AW745328.1|AW745328 WS1_33_F12.b1_A002 Water-stressed 1 ... 40 0.44
gb|AW746428.1|AW746428 WS1_53_G10.b1_A002 Water-stressed 1 ... 40 0.44
gb|AW924082.1|AW924082 WS1_49_F06.b1_A002 Water-stressed 1 ... 40 0.44
gb|BE362265.1|BE362265 DG1_85_B08.b1_A002 Dark Grown 1 (DG1... 40 0.44
gb|BE363861.1|BE363861 PI1_10_C05.b1_A002 Pathogen induced ... 40 0.44
gb|BG488379.1|BG488379 RHIZ2_62_H12.b1_A003 Rhizome2 (RHIZ2... 40 0.44
gb|CD210509.1|CD210509 HS1_51_B03.g1_A012 Heat-shocked seed... 40 0.44
gb|CN127364.1|CN127364 RHOH1_22_C12.g3_A002 Acid- and alkal... 40 0.44
gb|CF675626.1|CF675626 THAU2 Subtractive cDNA library from ... 40 0.44
gb|CF675675.1|CF675675 RUBISCO Subtractive cDNA library fro... 40 0.44
gb|DR831561.1|DR831561 MT14 Sorghum bicolor greenbug-respon... 40 0.44
>gb|CN152418.1|CN152418 WOUND1_81_H09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_H09_A002 5', mRNA sequence
Length = 804
Score = 969 bits (489), Expect = 0.0
Identities = 642/693 (92%)
Strand = Plus / Minus
Query: 373 cttcccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttg 432
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 801 cttcccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttg 742
Query: 433 aagtgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaa 492
|||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 741 gagtgagaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaa 682
Query: 493 cttagaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccat 552
||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ctttgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccat 622
Query: 553 cttgcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtt 612
||||||||| ||||| || |||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 621 cttgcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtt 562
Query: 613 tgggcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtctt 672
||| ||||||||||| || |||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 561 tggacgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgtttt 502
Query: 673 gacatcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatc 732
||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 501 gacatcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatc 442
Query: 733 ggtggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagc 792
|| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtagtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagc 382
Query: 793 acggagcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaac 852
||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 acgaagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaac 322
Query: 853 ctcaaagactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacac 912
|||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 321 ctcaaagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacac 262
Query: 913 gagagtcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtc 972
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 261 gagagtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatc 202
Query: 973 cttcttagagaagggatcgacggtctttttcttaccacccttctttcccttggagatcct 1032
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 201 cttcttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcct 142
Query: 1033 cttgttcttcccgactgccatggtagccgccgc 1065
||||||||| |||||||||||||| ||||||||
Sbjct: 141 cttgttcttgccgactgccatggttgccgccgc 109
>gb|CF487936.1|CF487936 POL1_46_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_G01_A002 5', mRNA sequence
Length = 722
Score = 908 bits (458), Expect = 0.0
Identities = 605/654 (92%)
Strand = Plus / Minus
Query: 412 cttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctcaatctcttt 471
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 722 cttgcggatgaagacattttggagtgggaagatgctggaggtggacttctcaatctcttt 663
Query: 472 gccaataacttccggaatgaacttagaaacaagttctttaaggtcacatgtagaagcctg 531
||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 662 accaataacttctggaatgaactttgaaacaagctctttcaggtcacatgtagaagcctg 603
Query: 532 gttgatcataatctcaaccatcttgcggcgaatctgccgaatctgggatgcctgagcata 591
|||| |||||||||||||||||||||||| ||||| || |||||||| ||||| |||||
Sbjct: 602 gttggccataatctcaaccatcttgcggcggatctggcggatctgggaagcctgggcata 543
Query: 592 gcaggttctcttgacctggtttgggcgcctcttggtaaaaccaatgcagaacaaacgcag 651
|||||||||||| ||||||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 542 gcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaacaagcgcag 483
Query: 652 catgtagttgtcggttgtcttgacatcaacatgggcttcaatcaatgtctgccacttctt 711
|||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 482 catgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctgccacttctt 423
Query: 712 tactagagatctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcacatt 771
|| || |||||||| ||||| || ||||| ||| ||||| |||||||||||||||||
Sbjct: 422 gaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagcacatt 363
Query: 772 cctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcacc 831
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 362 cctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatcctcgtcacc 303
Query: 832 ctgaagatcagctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatcct 891
||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 302 ctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctcagatgcaatcct 243
Query: 892 ggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgatgg 951
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 242 ggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccgacgg 183
Query: 952 ggccttgatgtcataccagtccttcttagagaagggatcgacggtctttttcttaccacc 1011
|||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 182 ggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccacc 123
Query: 1012 cttctttcccttggagatcctcttgttcttcccgactgccatggtagccgccgc 1065
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 122 cttctttcccttggagatcctcttgttcttgccgactgccatggttgccgccgc 69
>gb|CN126040.1|CN126040 RHOH1_14_G06.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_14_G06_A002 5', mRNA sequence
Length = 783
Score = 878 bits (443), Expect = 0.0
Identities = 650/718 (90%), Gaps = 2/718 (0%)
Strand = Plus / Minus
Query: 350 tagtcgccatgaacctccatcaacttcccgagatcaaacttgggggccttgagtatcttc 409
||||| |||||||||||||| | |||||| || ||||||| |||||||| || ||||||
Sbjct: 783 tagtcaccatgaacctccataagcttcccaaggtcaaactgtggggccttcaggatcttc 724
Query: 410 accttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctcaatctct 469
|||||||||||||| || || ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 723 accttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctcaatctct 664
Query: 470 ttgccaataacttccggaatgaacttagaaacaagttctttaaggtcacatgtagaagcc 529
|||||||| ||||| || || ||||| ||||| || || ||||| ||||| | ||| |||
Sbjct: 663 ttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaagaggcc 604
Query: 530 tggttgatcataatctcaaccatcttgcggcgaatctgccgaatctgggatgcctgagca 589
||||| | |||||| || |||||||||||||| |||||||| |||| |||||||||||||
Sbjct: 603 tggttcaccataatgtccaccatcttgcggcggatctgccggatctaggatgcctgagca 544
Query: 590 tagcaggttctcttgacctggtttgggcgcctcttggtaaaaccaatgcagaacaaacgc 649
||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 543 tagcacgttctcttgacctggtttgggcgcctcttggtgaagccaatgcagaacaagcgc 484
Query: 650 agcatgtagttgtcggttgtcttgacatcaacatgggcttcaatcaatgtctgccacttc 709
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 483 agcatgtagttgtcagttgtcttgacatcaacatgggcttcaattaatgtctgccacttc 424
Query: 710 tttactagagatctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcaca 769
|| ||||| |||||||| |||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 423 ttcactagggatctgagtttatcggtagtaaaactcatgccccaaaagtttgtgagcaca 364
Query: 770 ttcctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtca 829
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tccctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcg 304
Query: 830 ccctgaagatcagctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatc 889
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 303 ccttgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatc 244
Query: 890 ctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgat 949
||||||||||||||||||||||| |||||| |||||||||||||| ||||| || |||
Sbjct: 243 ctggtaccctgtgtcctggacac--tagtcttgccaatgttgcgcacgctgaacacagat 186
Query: 950 ggggccttgatgtcataccagtccttcttagagaagggatcgacggtctttttcttacca 1009
|||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 185 ggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttccca 126
Query: 1010 cccttctttcccttggagatcctcttgttcttcccgactgccatggtagccgccgccg 1067
|||||||||||||| ||||||||||||||||| || || |||||||| ||||||||||
Sbjct: 125 cccttctttcccttcgagatcctcttgttctttccaacagccatggtcgccgccgccg 68
>gb|CN152333.1|CN152333 WOUND1_81_H09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_81_H09_A002 3', mRNA sequence
Length = 766
Score = 821 bits (414), Expect = 0.0
Identities = 611/676 (90%), Gaps = 3/676 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 676 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 617
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 616 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 557
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 556 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 497
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 496 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 437
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 436 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 377
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 317
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 316 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 257
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 256 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 197
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 196 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 137
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacg 795
||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 agtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacg 77
Query: 796 gagcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctc 855
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 76 aagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctc 17
Query: 856 aaagactctgtgcttc 871
||||||||| ||||||
Sbjct: 16 aaagactctatgcttc 1
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 737 aataatcttaaaacacttgtt 717
>gb|BG649163.1|BG649163 EM1_77_B11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 726
Score = 797 bits (402), Expect = 0.0
Identities = 596/660 (90%), Gaps = 3/660 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 660 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 601
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 600 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 541
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 540 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 481
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 480 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 421
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 420 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 361
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 360 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 301
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 300 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 241
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 240 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 181
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 180 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 121
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacg 795
||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 agtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacg 61
Query: 796 gagcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctc 855
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 60 aagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctc 1
>gb|CF487849.1|CF487849 POL1_46_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_G01_A002 3', mRNA sequence
Length = 707
Score = 735 bits (371), Expect = 0.0
Identities = 565/629 (89%), Gaps = 3/629 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 629 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 570
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 569 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 510
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 509 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 450
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 449 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 390
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 389 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 330
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 270
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 269 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 210
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 209 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 150
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | || |||||||||||| || || |||||||| ||||| ||
Sbjct: 149 atcaacatgggcttcaatgagtggctgccacttcttgaccagggatctgagtttatcagt 90
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacg 795
||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 agtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacg 30
Query: 796 gagcctgattttcctgtaagcctgatcct 824
||||||||||||| ||||||||||||||
Sbjct: 29 aagcctgattttccggtaagcctgatcct 1
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 690 aataatcttaaaacacttgtt 670
>gb|BG933591.1|BG933591 OV1_32_B11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 669
Score = 722 bits (364), Expect = 0.0
Identities = 552/614 (89%), Gaps = 3/614 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 616 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 557
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 556 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 497
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 496 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 437
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 436 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 377
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 376 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 317
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 316 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 257
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 256 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 197
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 196 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 137
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 136 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 77
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacg 795
||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 agtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacg 17
Query: 796 gagcctgattttcc 809
|||||||||||||
Sbjct: 16 aagcctgattttcc 3
>gb|BG103298.1|BG103298 RHIZ2_18_C12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 529
Score = 708 bits (357), Expect = 0.0
Identities = 456/489 (93%)
Strand = Plus / Minus
Query: 581 gcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtaaaaccaatgcag 640
||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 528 gcctgagcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcag 469
Query: 641 aacaaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttcaatcaatgtc 700
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||
Sbjct: 468 aacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtc 409
Query: 701 tgccacttctttactagagatctgagcttatcggtggtaaaattcatgccccagaagttt 760
||||||||||| || || |||||||| ||||| || ||||| ||| ||||| ||||||
Sbjct: 408 tgccacttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagttt 349
Query: 761 gtgagcacattcctgccttgcacatcttcagcacggagcctgattttcctgtaagcctga 820
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 348 gtgagcacattcctgccttgcacatcttcagcacggagcctgattttccggtaagcctga 289
Query: 821 tcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgcttcagaccatca 880
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 288 tcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctca 229
Query: 881 gaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactg 940
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gaagcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactg 169
Query: 941 aagaccgatggggccttgatgtcataccagtccttcttagagaagggatcgacggtcttt 1000
|| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 168 aacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttc 109
Query: 1001 ttcttaccacccttctttcccttggagatcctcttgttcttcccgactgccatggtagcc 1060
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 108 ttcttcccacccttctttcccttggagatcctcttgttcttgccgactgccatggttgcc 49
Query: 1061 gccgccgcc 1069
|||||||||
Sbjct: 48 gccgccgcc 40
>gb|BG103114.1|BG103114 RHIZ2_18_C12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 662
Score = 702 bits (354), Expect = 0.0
Identities = 539/600 (89%), Gaps = 3/600 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 600 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 541
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 540 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 481
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 480 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 421
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 420 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 361
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 360 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 301
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 300 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 241
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 240 gcggcggatctggcggatctgggaagcctgagcatagcaggttctcttcacctggtttgg 181
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 180 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 121
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 120 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 61
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacg 795
||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 60 agtaaatgacattccccaaaaggttgtgagcacattcctgccttgcacatcttcagcacg 1
>gb|AW678569.1|AW678569 WS1_16_H06.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 675
Score = 696 bits (351), Expect = 0.0
Identities = 536/597 (89%), Gaps = 3/597 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 597 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 538
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 537 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 478
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 477 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 418
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 417 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 358
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 357 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 298
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 297 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 238
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 237 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 178
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 177 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 118
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 117 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 58
Query: 736 ggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagc 792
||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 57 agtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagc 1
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 658 aataatcttaaaacacttgtt 638
>gb|BE918770.1|BE918770 OV1_4_G09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 530
Score = 694 bits (350), Expect = 0.0
Identities = 458/494 (92%)
Strand = Plus / Minus
Query: 572 atctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtaaaa 631
|||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 527 atctgggaagcctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaag 468
Query: 632 ccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttca 691
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 467 ccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttca 408
Query: 692 atcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaattcatgccc 751
|| | ||||||||||||||| || || |||||||| ||||| || ||||| ||| |||
Sbjct: 407 atgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacattccc 348
Query: 752 cagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttcctg 811
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 347 caaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttccgg 288
Query: 812 taagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgcttc 871
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 287 taagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttc 228
Query: 872 agaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttg 931
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttg 168
Query: 932 cgcacactgaagaccgatggggccttgatgtcataccagtccttcttagagaagggatcg 991
||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 167 cgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcg 108
Query: 992 acggtctttttcttaccacccttctttcccttggagatcctcttgttcttcccgactgcc 1051
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107 acggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgactgcc 48
Query: 1052 atggtagccgccgc 1065
||||| ||||||||
Sbjct: 47 atggttgccgccgc 34
>gb|BG240609.1|BG240609 OV1_32_B11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 552
Score = 692 bits (349), Expect = 0.0
Identities = 457/493 (92%)
Strand = Plus / Minus
Query: 573 tctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctcttggtaaaac 632
||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 552 tctgggaagcctgggcatagcaggttctcttcacctggtttggacgcctcttggtgaagc 493
Query: 633 caatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttcaa 692
||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 492 caatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaa 433
Query: 693 tcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaattcatgcccc 752
| | ||||||||||||||| || || |||||||| ||||| || ||||| ||| ||||
Sbjct: 432 tgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacattcccc 373
Query: 753 agaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttcctgt 812
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 372 aaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttccggt 313
Query: 813 aagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgcttca 872
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 312 aagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttca 253
Query: 873 gaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgc 932
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttgc 193
Query: 933 gcacactgaagaccgatggggccttgatgtcataccagtccttcttagagaagggatcga 992
|||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 192 gcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcga 133
Query: 993 cggtctttttcttaccacccttctttcccttggagatcctcttgttcttcccgactgcca 1052
||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 132 cggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgactgcca 73
Query: 1053 tggtagccgccgc 1065
|||| ||||||||
Sbjct: 72 tggttgccgccgc 60
>gb|CF428517.1|CF428517 PH1_15_D09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D09_A002 5', mRNA sequence
Length = 596
Score = 680 bits (343), Expect = 0.0
Identities = 445/479 (92%)
Strand = Plus / Minus
Query: 587 gcatagcaggttctcttgacctggtttgggcgcctcttggtaaaaccaatgcagaacaaa 646
||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 595 gcatagcaggttctcttcacctggtttggacgcctcttggtgaagccaatgcagaacaag 536
Query: 647 cgcagcatgtagttgtcggttgtcttgacatcaacatgggcttcaatcaatgtctgccac 706
||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 535 cgcagcatgtagttgtcagttgttttgacatcaacatgggcttcaatgagtgtctgccac 476
Query: 707 ttctttactagagatctgagcttatcggtggtaaaattcatgccccagaagtttgtgagc 766
||||| || || |||||||| ||||| || ||||| ||| ||||| ||||||||||||
Sbjct: 475 ttcttgaccagggatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagc 416
Query: 767 acattcctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcg 826
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 415 acattcctgccttgcacatcttcagcacgaagcctgattttccggtaagcctgatcctcg 356
Query: 827 tcaccctgaagatcagctagacaaacctcaaagactctgtgcttcagaccatcagaggca 886
|||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 355 tcaccctgaagatcagctaggcaaacctcaaagactctatgcttcagaccctcagatgca 296
Query: 887 atcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagacc 946
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 295 atcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacacc 236
Query: 947 gatggggccttgatgtcataccagtccttcttagagaagggatcgacggtctttttctta 1006
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 235 gacggggccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttc 176
Query: 1007 ccacccttctttcccttggagatcctcttgttcttcccgactgccatggtagccgccgc 1065
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 175 ccacccttctttcccttggagatcctcttgttcttgccgactgccatggttgccgccgc 117
>gb|BG560038.1|BG560038 RHIZ2_68_F08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 495
Score = 650 bits (328), Expect = 0.0
Identities = 421/452 (93%)
Strand = Plus / Minus
Query: 618 gcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacat 677
|||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 495 gcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacat 436
Query: 678 caacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtgg 737
|||||||||||||||| | ||||||||||||||| || || |||||||| ||||| || |
Sbjct: 435 caacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtag 376
Query: 738 taaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacgga 797
|||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgga 316
Query: 798 gcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaa 857
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 315 gcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaa 256
Query: 858 agactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagag 917
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 agactctatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgagag 196
Query: 918 tcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttct 977
||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 195 tcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttct 136
Query: 978 tagagaagggatcgacggtctttttcttaccacccttctttcccttggagatcctcttgt 1037
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 135 tagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttgt 76
Query: 1038 tcttcccgactgccatggtagccgccgccgcc 1069
|||| |||||||||||||| ||||||||||||
Sbjct: 75 tcttgccgactgccatggttgccgccgccgcc 44
>gb|AW678507.1|AW678507 WS1_16_H06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 515
Score = 646 bits (326), Expect = 0.0
Identities = 425/458 (92%)
Strand = Plus / Minus
Query: 608 tggtttgggcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggtt 667
|||||||| ||||||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 515 tggtttggacgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagtt 456
Query: 668 gtcttgacatcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagc 727
|| ||||||||||||||||||||||| | ||||||||||||||| || || ||||||||
Sbjct: 455 gttttgacatcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagt 396
Query: 728 ttatcggtggtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatct 787
||||| || ||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 395 ttatcagtagtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatct 336
Query: 788 tcagcacggagcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctaga 847
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcagcacgaagcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctagg 276
Query: 848 caaacctcaaagactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctg 907
||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 275 caaacctcaaagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctg 216
Query: 908 gacacgagagtcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcatac 967
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 215 gacacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcatac 156
Query: 968 cagtccttcttagagaagggatcgacggtctttttcttaccacccttctttcccttggag 1027
|| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 155 caatccttcttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggag 96
Query: 1028 atcctcttgttcttcccgactgccatggtagccgccgc 1065
|||||||||||||| |||||||||||||| ||||||||
Sbjct: 95 atcctcttgttcttgccgactgccatggttgccgccgc 58
>gb|BE362353.1|BE362353 DG1_86_C10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 636 bits (321), Expect = e-180
Identities = 417/449 (92%)
Strand = Plus / Minus
Query: 617 cgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgaca 676
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 561 cgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgaca 502
Query: 677 tcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtg 736
||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 501 tcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagta 442
Query: 737 gtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacgg 796
||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacga 382
Query: 797 agcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctca 856
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 agcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctca 322
Query: 857 aagactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgaga 916
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aagactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgaga 262
Query: 917 gtcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttc 976
|||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 261 gtcttcccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttc 202
Query: 977 ttagagaagggatcgacggtctttttcttaccacccttctttcccttggagatcctcttg 1036
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttg 142
Query: 1037 ttcttcccgactgccatggtagccgccgc 1065
||||| |||||||||||||| ||||||||
Sbjct: 141 ttcttgccgactgccatggttgccgccgc 113
>gb|BE918513.1|BE918513 OV1_4_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 634 bits (320), Expect = e-180
Identities = 490/546 (89%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 557 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 498
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 497 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 438
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 437 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 378
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 377 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 318
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 317 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 258
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 257 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 198
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 197 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 138
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 137 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 78
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 77 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 18
Query: 736 ggtaaa 741
|||||
Sbjct: 17 agtaaa 12
>gb|CD429217.1|CD429217 ETH1_3_E01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_E01_A002 3', mRNA sequence
Length = 651
Score = 634 bits (320), Expect = e-180
Identities = 490/546 (89%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 554 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 495
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 494 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 435
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 434 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 375
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 374 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 315
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 314 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 255
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 254 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 195
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 194 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 135
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 134 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 75
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggt 735
|||||||||||||||||| | ||||||||||||||| || || |||||||| ||||| ||
Sbjct: 74 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagt 15
Query: 736 ggtaaa 741
|||||
Sbjct: 14 agtaaa 9
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 615 aataatcttaaaacacttgtt 595
>gb|BM329969.1|BM329969 PIC1_45_E10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 617
Score = 632 bits (319), Expect = e-179
Identities = 483/537 (89%), Gaps = 3/537 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 538 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 479
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 478 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 419
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 418 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 359
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 358 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 299
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 298 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 239
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 238 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 179
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 178 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 119
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 118 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 59
Query: 676 atcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatc 732
|||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 58 atcaacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatc 2
>gb|CN125950.1|CN125950 RHOH1_14_G06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_G06_A002 3', mRNA sequence
Length = 811
Score = 632 bits (319), Expect = e-179
Identities = 484/539 (89%)
Strand = Plus / Minus
Query: 284 gcaacctcctgcatagcctcatcaccctcgacaggcctctcaagcttcacaccaacgtcc 343
||||||||||| ||||||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 539 gcaacctcctgtccagcctcatctccctcaacgggcctctcaagcttcacgccaacatcc 480
Query: 344 tctttgtagtcgccatgaacctccatcaacttcccgagatcaaacttgggggccttgagt 403
||||| ||||| |||||||||||||| | |||||| || |||||||| |||||||| ||
Sbjct: 479 tctttatagtcaccatgaacctccataagcttcccaaggtcaaactttggggccttcagg 420
Query: 404 atcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctca 463
|||||||||||||||||||| || || ||||| ||||||||||||||||||| ||||||
Sbjct: 419 atcttcaccttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctca 360
Query: 464 atctctttgccaataacttccggaatgaacttagaaacaagttctttaaggtcacatgta 523
|||||||||||||| ||||| || || ||||| ||||| || || ||||| ||||| | |
Sbjct: 359 atctctttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaa 300
Query: 524 gaagcctggttgatcataatctcaaccatcttgcggcgaatctgccgaatctgggatgcc 583
|| |||||||| | |||||| || |||||||||||||| |||||||| |||| |||||||
Sbjct: 299 gaggcctggttcaccataatgtccaccatcttgcggcggatctgccggatctaggatgcc 240
Query: 584 tgagcatagcaggttctcttgacctggtttgggcgcctcttggtaaaaccaatgcagaac 643
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 239 tgagcatagcacgttctcttgacctggtttgggcgcctcttggtgaagccaatgcagaac 180
Query: 644 aaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttcaatcaatgtctgc 703
|| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 179 aagcgcagcatgtagttgtcagttgtcttgacatcaacatgggcttcaattaatgtctgc 120
Query: 704 cacttctttactagagatctgagcttatcggtggtaaaattcatgccccagaagtttgtg 763
|||||||| ||||| |||||||| |||||||| |||||| |||||||||| |||||||||
Sbjct: 119 cacttcttcactagggatctgagtttatcggtagtaaaactcatgccccaaaagtttgtg 60
Query: 764 agcacattcctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatc 822
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 agcacatccctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatc 1
>gb|BM324198.1|BM324198 PIC1_25_E08.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 478
Score = 626 bits (316), Expect = e-177
Identities = 427/464 (92%)
Strand = Plus / Minus
Query: 498 aaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatcttgc 557
||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 472 aaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatcttgc 413
Query: 558 ggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgggc 617
|||| ||||| || |||||||| ||||| ||||||||||||||||| ||||||||||| |
Sbjct: 412 ggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttggac 353
Query: 618 gcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacat 677
|||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 352 gcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacat 293
Query: 678 caacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtgg 737
|||||||||||||||| | ||||||||||||||| || || |||||||| ||||| || |
Sbjct: 292 caacatgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtag 233
Query: 738 taaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacgga 797
|||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 232 taaatgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaa 173
Query: 798 gcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaa 857
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 172 gcctgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaa 113
Query: 858 agactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagag 917
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112 agactctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagag 53
Query: 918 tcttcccaatgttgcgcacactgaagaccgatggggccttgatg 961
||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 52 tcttcccaatgttgcgcacactgaacaccgacggggccttgatg 9
>gb|CD213543.1|CD213543 HS1_41_B02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_41_B02_A012 5', mRNA sequence
Length = 569
Score = 626 bits (316), Expect = e-177
Identities = 412/444 (92%)
Strand = Plus / Minus
Query: 622 cttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaac 681
|||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 569 cttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaac 510
Query: 682 atgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtggtaaa 741
|||||||||||| | ||||||||||||||| || || |||||||| ||||| || |||||
Sbjct: 509 atgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaa 450
Query: 742 attcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcct 801
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacggagcct 390
Query: 802 gattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagac 861
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 389 gattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagac 330
Query: 862 tctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtctt 921
||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tctatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgagagtctt 270
Query: 922 cccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttcttaga 981
||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct: 269 cccaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttgga 210
Query: 982 gaagggatcgacggtctttttcttaccacccttctttcccttggagatcctcttgttctt 1041
|||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 209 gaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttctt 150
Query: 1042 cccgactgccatggtagccgccgc 1065
|||||||||||||| ||||||||
Sbjct: 149 gccgactgccatggttgccgccgc 126
>gb|BG052778.1|BG052778 RHIZ2_14_G07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 575
Score = 622 bits (314), Expect = e-176
Identities = 463/512 (90%), Gaps = 3/512 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 512 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 453
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 452 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 393
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 392 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 333
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 332 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 273
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 272 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 213
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 212 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 153
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 152 gcggcggatctggcggatctgggaagcctgagcatagcaggttctcttcacctggtttgg 93
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 92 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgac 33
Query: 676 atcaacatgggcttcaatcaatgtctgccact 707
|||||||||||||||||| | |||||||||||
Sbjct: 32 atcaacatgggcttcaatgagtgtctgccact 1
Score = 40.1 bits (20), Expect = 0.44
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 122 ataatcttaaaacacttgtt 141
||||||||||||||||||||
Sbjct: 572 ataatcttaaaacacttgtt 553
>gb|BM325519.1|BM325519 PIC1_45_E10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 555
Score = 617 bits (311), Expect = e-174
Identities = 403/434 (92%)
Strand = Plus / Minus
Query: 632 ccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttca 691
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 551 ccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaacatgggcttca 492
Query: 692 atcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaattcatgccc 751
|| | ||||||||||||||| || || |||||||| ||||| || ||||| ||| |||
Sbjct: 491 atgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacattccc 432
Query: 752 cagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttcctg 811
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 431 caaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattntccgg 372
Query: 812 taagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgcttc 871
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 371 taagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgcttc 312
Query: 872 agaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttg 931
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttg 252
Query: 932 cgcacactgaagaccgatggggccttgatgtcataccagtccttcttagagaagggatcg 991
||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 251 cgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcg 192
Query: 992 acggtctttttcttaccacccttctttcccttggagatcctcttgttcttcccgactgcc 1051
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 acggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgactgcc 132
Query: 1052 atggtagccgccgc 1065
||||| ||||||||
Sbjct: 131 atggttgccgccgc 118
>gb|BG052841.1|BG052841 RHIZ2_14_G07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 493
Score = 613 bits (309), Expect = e-173
Identities = 417/453 (92%)
Strand = Plus / Minus
Query: 617 cgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgaca 676
||||||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 492 cgcctcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgaca 433
Query: 677 tcaacatgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtg 736
||||||||||||||||| | ||||||||||||||| | || |||||||| ||||| ||
Sbjct: 432 tcaacatgggcttcaatgagtgtctgccacttcttgcccagggatctgagtttatcagta 373
Query: 737 gtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacgg 796
||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 372 gtaaatgacattccccaaaagtttgtgagcacattcctgccttgcgcatcttcagcacgg 313
Query: 797 agcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctca 856
||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 agcatgattttccggtaagcatgatcctcgtcaccctgaagatcagctaggcaaacctca 253
Query: 857 aagactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgaga 916
|||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 252 aagactatatgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgaga 193
Query: 917 gtcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttc 976
|||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 192 gtcttcccaatgttgcgcacactgaacaccgacggggcgttgatgtcataccaatccttc 133
Query: 977 ttagagaagggatcgacggtctttttcttaccacccttctttcccttggagatcctcttg 1036
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 132 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttggagatcctcttg 73
Query: 1037 ttcttcccgactgccatggtagccgccgccgcc 1069
||||| |||||||||||||||||||||||||||
Sbjct: 72 ttcttgccgactgccatggtagccgccgccgcc 40
>gb|BE594510.1|BE594510 PI1_34_B09.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 572
Score = 607 bits (306), Expect = e-171
Identities = 412/446 (92%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 621 tcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaa 680
||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 571 tcttggtgaagccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcaa 512
Query: 681 catgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtggtaa 740
||||||||||||| | ||||||||||||||| || || |||||||| ||||| || ||||
Sbjct: 511 catgggcttcaatgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaa 452
Query: 741 aattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcc 800
| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 451 atgacattccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcc 392
Query: 801 tgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaaga 860
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 391 tgattttccggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaaga 332
Query: 861 ctctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtct 920
|||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctctatgcttcagaccctcagatgcaatcctggtaccctgtgtcctggacacgagagtct 272
Query: 921 tcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttcttag 980
||| |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 271 tcctaatgttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttag 212
Query: 981 agaagggatcgacggtctttttcttaccacccttcttt-cccttggagatcctcttgttc 1039
||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 211 agaaggggtcgacggtcttcttcttcccacccttctttccccttggagatcctcttgttc 152
Query: 1040 ttcccgactgccatggtagccgccgc 1065
|| |||||||||||||| ||||||||
Sbjct: 151 ttgccgactgccatggttgccgccgc 126
>gb|BI643592.1|BI643592 DG1_90_D06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 553
Score = 599 bits (302), Expect = e-169
Identities = 401/434 (92%)
Strand = Plus / Minus
Query: 632 ccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaacatgggcttca 691
|||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 550 ccaatgcagaacaagcgcagcatgtagttgtcagttgttttgacatcagcatgggcttca 491
Query: 692 atcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaattcatgccc 751
|| | ||||||||||||||| || || |||||||| ||||| || ||||| ||| |||
Sbjct: 490 atgagtgtctgccacttcttgaccagggatctgagtttatcagtagtaaatgacattccc 431
Query: 752 cagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttcctg 811
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 430 caaaagtttgtgagcacattcctgccttgcacatcttcagcacgaagcctgattttccgg 371
Query: 812 taagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgcttc 871
|||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 370 taagcctgatcctcgtcaccgtgaagatcagctaggcaaacctcaaagactctatgcttc 311
Query: 872 agaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatgttg 931
||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agaccctcagatgcaatcttggtaccctgtgtcctggacacgagagtcttcccaatgttg 251
Query: 932 cgcacactgaagaccgatggggccttgatgtcataccagtccttcttagagaagggatcg 991
||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 250 cgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaaggggtcg 191
Query: 992 acggtctttttcttaccacccttctttcccttggagatcctcttgttcttcccgactgcc 1051
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 190 acggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgactgcc 131
Query: 1052 atggtagccgccgc 1065
||||| ||||||||
Sbjct: 130 atggttgccgccgc 117
>gb|BE366520.1|BE366520 PI1_34_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 580
Score = 595 bits (300), Expect = e-168
Identities = 449/498 (90%), Gaps = 3/498 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 499 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 440
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 439 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 380
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 379 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 320
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 319 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 260
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 259 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 200
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 199 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 140
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 139 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 80
Query: 616 gcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgac 675
||||||||||| || |||||||||||||| ||||||||||||| ||| ||||| |||||
Sbjct: 79 acgcctcttggtgaagccaatgcagaacaagcgcagcatgtagtagtcagttgttttgac 20
Query: 676 atcaacatgggcttcaat 693
||||||||||||||||||
Sbjct: 19 atcaacatgggcttcaat 2
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 560 aataatcttaaaacacttgtt 540
>gb|BF422248.1|BF422248 FM1_13_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 386
Score = 525 bits (265), Expect = e-147
Identities = 307/321 (95%)
Strand = Plus / Minus
Query: 749 ccccagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttc 808
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctgattttc 303
Query: 809 ctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagactctgtgc 868
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 302 cggtaagcctgatcctcgtcaccctgaagatcagctaggcaaacctcaaagactctatgc 243
Query: 869 ttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttcccaatg 928
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcagaccctcagaagcaatcctggtaccctgtgtcctggacacgagagtcttcccaatg 183
Query: 929 ttgcgcacactgaagaccgatggggccttgatgtcataccagtccttcttagagaaggga 988
|||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 182 ttgcgcacactgaacaccgacggggccttgatgtcataccaatccttcttagagaagggg 123
Query: 989 tcgacggtctttttcttaccacccttctttcccttggagatcctcttgttcttcccgact 1048
||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122 tcgacggtcttcttcttcccacccttctttcccttggagatcctcttgttcttgccgact 63
Query: 1049 gccatggtagccgccgccgcc 1069
|||||||| ||||||||||||
Sbjct: 62 gccatggttgccgccgccgcc 42
>gb|CD213453.1|CD213453 HS1_41_B02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_41_B02_A012 3', mRNA sequence
Length = 516
Score = 511 bits (258), Expect = e-143
Identities = 389/432 (90%), Gaps = 3/432 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 434 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 375
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 374 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 315
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 314 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 255
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 254 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 195
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 194 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctgggatgaactt 135
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 134 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 75
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 74 gcggcggatctggcggatctgggaagcctgagcatagcaggttctcttcacctggtttgg 15
Query: 616 gcgcctcttggt 627
|||||||||||
Sbjct: 14 acgcctcttggt 3
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 495 aataatcttaaaacacttgtt 475
>gb|BE358248.1|BE358248 DG1_27_C08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 397
Score = 507 bits (256), Expect = e-142
Identities = 324/347 (93%)
Strand = Plus / Minus
Query: 719 gatctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcacattcctgcct 778
|||||||| ||||| || ||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 397 gatctgagtttatcagtagtaaatgacattccccaaaagtttgtgagcacattcctgcct 338
Query: 779 tgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcaccctgaaga 838
||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 337 tgcacatcttcagcacgaagcctgattntccggtaagcctgatcctcgtcaccctgaaga 278
Query: 839 tcagctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatcctggtaccc 898
|||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 277 tcagctaggcaaacctcaaagactctatgcttcagaccctcagatgcaatcctggtaccc 218
Query: 899 tgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgatggggccttg 958
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 217 tgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccgacggggccttg 158
Query: 959 atgtcataccagtccttcttagagaagggatcgacggtctttttcttaccacccttcttt 1018
||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 157 atgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccacccttcttt 98
Query: 1019 cccttggagatcctcttgttcttcccgactgccatggtagccgccgc 1065
||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 97 cccttggagatcctcttgttcttgccgactgccatggttgccgccgc 51
>gb|BF480817.1|BF480817 FM1_14_C08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 443
Score = 498 bits (251), Expect = e-139
Identities = 332/359 (92%)
Strand = Plus / Minus
Query: 713 actagagatctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcacattc 772
||||| |||||||| ||||| || |||||| |||||||||| ||||||||||||||||||
Sbjct: 442 actagggatctgagtttatcagtagtaaaactcatgccccaaaagtttgtgagcacattc 383
Query: 773 ctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcaccc 832
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 382 ctgccttgcacatcttcagcacggagcctgattttcctgtaagcctgatcctcatcgcct 323
Query: 833 tgaagatcagctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatcctg 892
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 322 tgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagcaatcctg 263
Query: 893 gtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgatggg 952
|||||||||||||||||||| |||||||| |||||||||||||| ||||| || || |||
Sbjct: 262 gtaccctgtgtcctggacactagagtcttgccaatgttgcgcacgctgaacacagacggg 203
Query: 953 gccttgatgtcataccagtccttcttagagaagggatcgacggtctttttcttaccaccc 1012
||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 202 gccttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcccaccc 143
Query: 1013 ttctttcccttggagatcctcttgttcttcccgactgccatggtagccgccgccgccgc 1071
||||||||||| ||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 142 ttctttcccttcgagatcctcttgttctttccaacagccatggtcgccgccgccgccgc 84
>gb|CF428434.1|CF428434 PH1_15_D09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_15_D09_A002 3', mRNA sequence
Length = 502
Score = 496 bits (250), Expect = e-138
Identities = 378/420 (90%), Gaps = 3/420 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 421 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 362
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 361 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 302
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 301 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 242
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 241 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 182
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 181 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 122
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 62
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 61 gcggcggatctggcggatctgggaagcctgggcatagcaggttctcttcacctggtttgg 2
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 482 aataatcttaaaacacttgtt 462
>gb|BG050679.1|BG050679 FM1_71_D10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 473
Score = 488 bits (246), Expect = e-136
Identities = 377/420 (89%), Gaps = 3/420 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 420 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 361
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 360 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 301
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 300 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 241
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 240 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 181
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 180 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 121
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 120 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 61
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgg 615
|||||| ||||| || |||||||| |||||||||||||| | |||||| |||||||||||
Sbjct: 60 gcggcggatctggcggatctgggaagcctgagcatagcaaggtctcttcacctggtttgg 1
>gb|BG558764.1|BG558764 RHIZ2_56_C04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 423
Score = 476 bits (240), Expect = e-132
Identities = 311/335 (92%)
Strand = Plus / Minus
Query: 737 gtaaaattcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacgg 796
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtaaaactcatgccccaaaagtttgtgagcacattcctgccttgcacatcttcagcacgg 363
Query: 797 agcctgattttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctca 856
||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||
Sbjct: 362 agcctgattttcctgtaagcctgatcctcctcgccttgaagatcagctaggcaaacctca 303
Query: 857 aagactctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgaga 916
|||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 302 aagactntgtgcttcagaccctcagaagcaatcctggtaccctgtgtcctggacactaga 243
Query: 917 gtcttcccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttc 976
||||| |||||||||||||| ||||| || || |||||||||||||||||||| ||||||
Sbjct: 242 gtcttgccaatgttgcgcacgctgaacacagacggggccttgatgtcataccaatccttc 183
Query: 977 ttagagaagggatcgacggtctttttcttaccacccttctttcccttggagatcctcttg 1036
||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 182 ttagagaaggggtcgacggtcttcttcttcccacccttctttcccttcgagatcctcttg 123
Query: 1037 ttcttcccgactgccatggtagccgccgccgccgc 1071
||||| || || |||||||| ||||||||||||||
Sbjct: 122 ttctttccaacagccatggtcgccgccgccgccgc 88
>gb|BE593246.1|BE593246 WS1_99_D04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 471
Score = 472 bits (238), Expect = e-131
Identities = 363/404 (89%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 412 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 353
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 352 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 293
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 292 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 233
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 232 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 173
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 172 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 113
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 112 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 53
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttc 599
|||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct: 52 gcggcggatctggcggatctgggaagcctgggcatagcaggttc 9
>gb|BE593660.1|BE593660 WS1_99_D04.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 498
Score = 472 bits (238), Expect = e-131
Identities = 363/404 (89%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 412 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 353
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 352 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 293
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 292 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 233
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 232 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 173
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 172 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 113
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 112 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 53
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcaggttc 599
|||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct: 52 gcggcggatctggcggatctgggaagcctgggcatagcaggttc 9
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 473 aataatcttaaaacacttgtt 453
>gb|BM328700.1|BM328700 PIC1_25_E08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 499
Score = 466 bits (235), Expect = e-129
Identities = 360/401 (89%), Gaps = 3/401 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 401 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 342
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 341 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 282
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 281 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 222
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 221 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 162
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 161 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 102
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 101 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 42
Query: 556 gcggcgaatctgccgaatctgggatgcctgagcatagcagg 596
|||||| ||||| || |||||||| ||||| ||||||||||
Sbjct: 41 gcggcggatctggcggatctgggaagcctgggcatagcagg 1
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 462 aataatcttaaaacacttgtt 442
>gb|AI724706.1|AI724706 RHIZ1_26_A01.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 489
Score = 450 bits (227), Expect = e-124
Identities = 349/389 (89%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 394 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 335
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 334 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 275
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 274 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 215
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 214 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 155
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 154 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 95
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 94 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 35
Query: 556 gcggcgaatctgccgaatctgggatgcct 584
|||||| ||||| || |||||||| ||||
Sbjct: 34 gcggcggatctggcggatctgggaagcct 6
Score = 42.1 bits (21), Expect = 0.11
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgtt 141
|||||||||||||||||||||
Sbjct: 455 aataatcttaaaacacttgtt 435
>gb|BF422195.1|BF422195 FM1_13_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 431
Score = 448 bits (226), Expect = e-124
Identities = 345/384 (89%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 384 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 325
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 324 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 265
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
||||||||| ||||||||||| || ||||| |||||||| |||||||||||||| | |||
Sbjct: 264 aggcctctcgagcttcacacccacatcctccttgtagtcaccatgaacctccatgagctt 205
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 204 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 145
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 144 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 85
Query: 496 agaaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatctt 555
|||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 84 tgaaacaagctctttcaggtcacatgtagaagcctggttggccataatctcaaccatctt 25
Query: 556 gcggcgaatctgccgaatctggga 579
|||||| ||||| || ||||||||
Sbjct: 24 gcggcggatctggcggatctggga 1
>gb|CF758342.1|CF758342 DSAF1_30_F02.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_30_F02_A011 3', mRNA sequence
Length = 519
Score = 396 bits (200), Expect = e-108
Identities = 296/328 (90%)
Strand = Plus / Minus
Query: 258 agtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgacag 317
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 331 agtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaacag 272
Query: 318 gcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaacttcc 377
|||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||||
Sbjct: 271 gcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagcttcc 212
Query: 378 cgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaagtg 437
||| |||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 211 cgaaatcaaacttgggagccttgagtatcttcaccttgcggatgaaaacattttggagtg 152
Query: 438 ggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaacttag 497
|||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 151 ggaaaatgctggagggggacttctcaatctctttaccaataacttctggaatgaactttg 92
Query: 498 aaacaagttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatcttgc 557
||||||| || || |||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 91 aaacaagctcattcaggtcacatgtaaaagcctggttggccataatctcaaccatcttgc 32
Query: 558 ggcgaatctgccgaatctgggatgcctg 585
|||| ||||| || |||||||| |||||
Sbjct: 31 ggcggatctggcggatctgggaagcctg 4
Score = 40.1 bits (20), Expect = 0.44
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgt 140
||||||||||||||||||||
Sbjct: 485 aataatcttaaaacacttgt 466
>gb|CF758951.1|CF758951 DSAF1_38_E04.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_38_E04_A011 3', mRNA sequence
Length = 444
Score = 359 bits (181), Expect = 4e-097
Identities = 282/315 (89%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 318 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 259
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 258 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 199
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 198 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 139
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 138 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 79
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataacttccggaatgaactt 495
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 78 tgggaagatgctggaggtggacttctcaatctctttaccaataacttctggaatgaactt 19
Query: 496 agaaacaagttcttt 510
|||||||| |||||
Sbjct: 18 tgaaacaagctcttt 4
Score = 40.1 bits (20), Expect = 0.44
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgt 140
||||||||||||||||||||
Sbjct: 410 aataatcttaaaacacttgt 391
>gb|BG050836.1|BG050836 FM1_71_D10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 283
Score = 353 bits (178), Expect = 2e-095
Identities = 226/242 (93%)
Strand = Plus / Minus
Query: 828 caccctgaagatcagctagacaaacctcaaagactctgtgcttcagaccatcagaggcaa 887
|||| |||||||||| ||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 283 caccgtgaagatcaggtaggcaaacctcaaagactctatgcttcagaccctcagaagcaa 224
Query: 888 tcctggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaagaccg 947
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 223 tcgtggtaccctgtgtcctggacacgagagtcttcccaatgttgcgcacactgaacaccg 164
Query: 948 atggggccttgatgtcataccagtccttcttagagaagggatcgacggtctttttcttac 1007
| ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |
Sbjct: 163 acggggcgttgatgtcataccaatccttcttagagaaggggtcgacggtcttcttcttcc 104
Query: 1008 cacccttctttcccttggagatcctcttgttcttcccgactgccatggtagccgccgccg 1067
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 103 cacccttctttcccttggagatcctcttgttcttgccgactgccatggttgccgccgccg 44
Query: 1068 cc 1069
||
Sbjct: 43 cc 42
>gb|CF760153.1|CF760153 DSAF1_56_B06.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_B06_A011 5', mRNA sequence
Length = 434
Score = 323 bits (163), Expect = 2e-086
Identities = 255/285 (89%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 285 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 226
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 225 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 166
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 165 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 106
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 105 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 46
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataac 480
|||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 45 tgggaagatgctggaggtggacttctcaatctctttaccaataac 1
Score = 40.1 bits (20), Expect = 0.44
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgt 140
||||||||||||||||||||
Sbjct: 377 aataatcttaaaacacttgt 358
>gb|CF761777.1|CF761777 DSAF1_80_G06.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_80_G06_A011 3', mRNA sequence
Length = 411
Score = 323 bits (163), Expect = 2e-086
Identities = 255/285 (89%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 199 acaattttatgaagttcgcgtcataagggacctcctgtccagattcgtctagataa---a 255
|||||| |||||||||| | ||||||| |||| ||||||| | || |||||||| |
Sbjct: 285 acaattctatgaagttcacatcataagcaacctactgtccaaaatcttctagatattata 226
Query: 256 gaagtagcaaataaactactcggcagcagcaacctcctgcatagcctcatcaccctcgac 315
| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct: 225 gtagtagcaaataaactactcggcagcagcaacctcctgcccagcctcatctccctcaac 166
Query: 316 aggcctctcaagcttcacaccaacgtcctctttgtagtcgccatgaacctccatcaactt 375
|||||||||||||||||| || || ||||| |||||||| |||||||||||||| | |||
Sbjct: 165 aggcctctcaagcttcacccccacatcctccttgtagtcaccatgaacctccatgagctt 106
Query: 376 cccgagatcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaag 435
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 105 cccgagatcaaacttgggagccttgagtatcttcaccttgcggatgaagacattttggag 46
Query: 436 tgggaagatgctggaggtagacttctcaatctctttgccaataac 480
|||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 45 tgggaagatgctggaggtggacttctcaatctctttaccaataac 1
Score = 40.1 bits (20), Expect = 0.44
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 aataatcttaaaacacttgt 140
||||||||||||||||||||
Sbjct: 377 aataatcttaaaacacttgt 358
>gb|CN129864.1|CN129864 RHOH1_37_H08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_37_H08_A002 5', mRNA sequence
Length = 778
Score = 323 bits (163), Expect = 2e-086
Identities = 526/647 (81%)
Strand = Plus / Minus
Query: 383 tcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaagtgggaag 442
|||||||| || || || || ||||||||||||||||||||||| ||||| | |||||
Sbjct: 744 tcaaactttggtgcttttaggatcttcaccttgcggatgaagacattttgcaaggggaat 685
Query: 443 atgctggaggtagacttctcaatctctttgccaataacttccggaatgaacttagaaaca 502
||||| ||||| | ||||| || || || ||||| || || || |||||||| || ||
Sbjct: 684 atgctagaggtggctttctcgatttcctttccaatgacctcagggatgaacttggacacg 625
Query: 503 agttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatcttgcggcga 562
|||||||| || ||||| || ||||| |||||| |||| || ||| |||||| || |||
Sbjct: 624 agttctttcagatcacaagttgaagcttggttgctcatgatttcagtcatcttccgacga 565
Query: 563 atctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctc 622
||||| | || ||| ||| ||||||||||| || | ||| || || || || ||||||
Sbjct: 564 atctgtctgatttggcttgcttgagcatagcaagtgcgcttcacttgattgggccgcctc 505
Query: 623 ttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaaca 682
||||| || ||||||||||||| ||| ||||||||||| ||||| |||||||||||||||
Sbjct: 504 ttggtgaacccaatgcagaacagacgtagcatgtagttatcggtggtcttgacatcaaca 445
Query: 683 tgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaa 742
|| || ||||| | |||||||| ||||| || || || | |||||||||||| || ||
Sbjct: 444 tgtgcctcaataagcgtctgccatttcttcaccagtgaacggagcttatcggtagtgaag 385
Query: 743 ttcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctg 802
|||| ||||||||||||||||| ||||| || ||||| | ||| || ||||| || ||
Sbjct: 384 ctcataccccagaagtttgtgagaacatttctcccttgtatatcctctgcacgaagtcta 325
Query: 803 attttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagact 862
|| |||||||| ||||| || || |||| |||||||||||| | | |||||||| |||
Sbjct: 324 atcttcctgtatgcctggtcttcatcactctgaagatcagccaaggagacctcaaatact 265
Query: 863 ctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttc 922
|||||||| | ||| |||||||||||| |||| |||||||||||||| || || |||||
Sbjct: 264 ctgtgctttaaaccctcagaggcaatcttggtgccctgtgtcctggagacaagggtcttg 205
Query: 923 ccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttcttagag 982
|| ||||||||||| ||||||||||| || |||||||| |||||||| ||||| || |
Sbjct: 204 ccgatgttgcgcacgctgaagaccgacggagccttgatatcataccaatcctttttgctg 145
Query: 983 aagggatcgacggtctttttcttaccacccttctttcccttggagat 1029
|| ||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 144 aacggatccacggtcttcttcttgcctcccttcttgcccttggagat 98
>gb|CN127366.1|CN127366 RHOH1_22_D02.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_22_D02_A002 5', mRNA sequence
Length = 821
Score = 317 bits (160), Expect = 1e-084
Identities = 541/668 (80%)
Strand = Plus / Minus
Query: 362 acctccatcaacttcccgagatcaaacttgggggccttgagtatcttcaccttgcggatg 421
|||||||| | ||| |||| |||||||| || || || || ||||||||||||||||||
Sbjct: 762 acctccatgagctttccgatgtcaaactttggtgcttttaggatcttcaccttgcggatg 703
Query: 422 aagacgttttgaagtgggaagatgctggaggtagacttctcaatctctttgccaataact 481
||||| ||||| | ||||| ||||| ||||| | ||||| || || || ||||| ||
Sbjct: 702 aagacattttgcaaggggaatatgctagaggtggctttctcgatttcctttccaatgacc 643
Query: 482 tccggaatgaacttagaaacaagttctttaaggtcacatgtagaagcctggttgatcata 541
|| || |||||||| || || |||||||| || ||||| || ||||| |||||| ||||
Sbjct: 642 tcagggatgaacttggacacgagttctttcagatcacaagttgaagcttggttgctcatg 583
Query: 542 atctcaaccatcttgcggcgaatctgccgaatctgggatgcctgagcatagcaggttctc 601
|| ||| |||||| || |||||||| | || ||| ||| | ||||||||| || | |
Sbjct: 582 atttcagtcatcttccgacgaatctgtctgatttggcttgcttaagcatagcaagtgcgc 523
Query: 602 ttgacctggtttgggcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttg 661
|| || || || || ||||||||||| || ||||||||||||| ||| |||||||||||
Sbjct: 522 ttcacttgattgggccgcctcttggtgaacccaatgcagaacagacgtagcatgtagtta 463
Query: 662 tcggttgtcttgacatcaacatgggcttcaatcaatgtctgccacttctttactagagat 721
||||| ||||||||||||||||| || ||||| | |||||||| ||||| || || ||
Sbjct: 462 tcggtggtcttgacatcaacatgtgcctcaataagcgtctgccatttcttcaccagtgaa 403
Query: 722 ctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcacattcctgccttgc 781
| |||||||||||| || || |||| ||||||||||||||||| ||||| || |||||
Sbjct: 402 cggagcttatcggtagtgaagctcataccccagaagtttgtgagaacatttctcccttgt 343
Query: 782 acatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcaccctgaagatca 841
| ||| || ||||| || || || |||||||| ||||| || || |||| ||||||||||
Sbjct: 342 atatcctctgcacgaagtctaatcttcctgtatgcctggtcttcatcactctgaagatca 283
Query: 842 gctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatcctggtaccctgt 901
|| | | |||||||| ||||||||||| | ||| |||||||||||| |||| ||||||
Sbjct: 282 gccaaggagacctcaaatactctgtgctttaaaccctcagaggcaatcttggtgccctgt 223
Query: 902 gtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgatggggccttgatg 961
|||||||| || || ||||| || ||||||||||| ||||||||||| || ||||||||
Sbjct: 222 gtcctggagacaagggtcttgccgatgttgcgcacgctgaagaccgacggagccttgata 163
Query: 962 tcataccagtccttcttagagaagggatcgacggtctttttcttaccacccttctttccc 1021
|||||||| ||||| || ||| ||||| |||||||| ||||| || |||||||| |||
Sbjct: 162 tcataccaatcctttttgctgaacggatccacggtcttcttcttgcctcccttcttgccc 103
Query: 1022 ttggagat 1029
||||||||
Sbjct: 102 ttggagat 95
>gb|CN145357.1|CN145357 WOUND1_28_A05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A05_A002 5', mRNA sequence
Length = 801
Score = 317 bits (160), Expect = 1e-084
Identities = 541/668 (80%)
Strand = Plus / Minus
Query: 362 acctccatcaacttcccgagatcaaacttgggggccttgagtatcttcaccttgcggatg 421
|||||||| | ||| |||| |||||||| || || || || ||||||||||||||||||
Sbjct: 764 acctccatgagctttccgatgtcaaactttggtgcttttaggatcttcaccttgcggatg 705
Query: 422 aagacgttttgaagtgggaagatgctggaggtagacttctcaatctctttgccaataact 481
||||| ||||| | ||||| ||||| ||||| | ||||| || || || ||||| ||
Sbjct: 704 aagacattttgcaaggggaatatgctagaggtggctttctcgatttcctttccaatgacc 645
Query: 482 tccggaatgaacttagaaacaagttctttaaggtcacatgtagaagcctggttgatcata 541
|| || |||||||| || || |||||||| || ||||| || ||||| |||||| ||||
Sbjct: 644 tcagggatgaacttggacacgagttctttcagatcacaagttgaagcttggttgctcatg 585
Query: 542 atctcaaccatcttgcggcgaatctgccgaatctgggatgcctgagcatagcaggttctc 601
|| ||| |||||| || |||||||| | || ||| ||| ||||||||||| || | |
Sbjct: 584 atttcagtcatcttccgacgaatctgtctgatttggcttgcttgagcatagcaagtgcgc 525
Query: 602 ttgacctggtttgggcgcctcttggtaaaaccaatgcagaacaaacgcagcatgtagttg 661
|| || || || || ||||||||||| || ||||||||||||| ||| |||||||||||
Sbjct: 524 ttcacttgattgggccgcctcttggtgaacccaatgcagaacagacgtagcatgtagtta 465
Query: 662 tcggttgtcttgacatcaacatgggcttcaatcaatgtctgccacttctttactagagat 721
||||| ||||||||||||||||| || ||||| | |||||||| ||||| || || ||
Sbjct: 464 tcggtggtcttgacatcaacatgtgcctcaataagcgtctgccatttcttcaccagtgaa 405
Query: 722 ctgagcttatcggtggtaaaattcatgccccagaagtttgtgagcacattcctgccttgc 781
| |||||||||||| || || |||| ||||||||||||||||| ||||| || |||||
Sbjct: 404 cggagcttatcggtagtgaagctcataccccagaagtttgtgagaacatttctcccttgt 345
Query: 782 acatcttcagcacggagcctgattttcctgtaagcctgatcctcgtcaccctgaagatca 841
| ||| || ||||| | || || |||||||| ||||| || || |||| ||||||||||
Sbjct: 344 atatcctctgcacgaaatctaatcttcctgtatgcctggtcttcatcactctgaagatca 285
Query: 842 gctagacaaacctcaaagactctgtgcttcagaccatcagaggcaatcctggtaccctgt 901
|| | | |||||||| ||||||||||| | ||| |||||||||||| |||| ||||||
Sbjct: 284 gccaaggagacctcaaatactctgtgctttaaaccctcagaggcaatcttggtgccctgt 225
Query: 902 gtcctggacacgagagtcttcccaatgttgcgcacactgaagaccgatggggccttgatg 961
|||||||| || || ||||| || ||||||||||| ||||||||||| || ||||||||
Sbjct: 224 gtcctggagacaagggtcttgccgatgttgcgcacgctgaagaccgacggagccttgata 165
Query: 962 tcataccagtccttcttagagaagggatcgacggtctttttcttaccacccttctttccc 1021
|||||||| ||||| || ||| ||||| |||||||| ||||| || |||||||| |||
Sbjct: 164 tcataccaatcctttttgctgaacggatccacggtcttcttcttgcctcccttcttgccc 105
Query: 1022 ttggagat 1029
||||||||
Sbjct: 104 ttggagat 97
>gb|CN134988.1|CN134988 OX1_29_G07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_G07_A002 5', mRNA sequence
Length = 758
Score = 315 bits (159), Expect = 5e-084
Identities = 525/647 (81%)
Strand = Plus / Minus
Query: 383 tcaaacttgggggccttgagtatcttcaccttgcggatgaagacgttttgaagtgggaag 442
|||||||| || || || || ||||||||||||||||||||||| ||||| | |||||
Sbjct: 743 tcaaactttggtgcttttaggatcttcaccttgcggatgaagacattttgcaaggggaat 684
Query: 443 atgctggaggtagacttctcaatctctttgccaataacttccggaatgaacttagaaaca 502
||||| ||||| | ||||| || || || ||||| || || || |||||||| || ||
Sbjct: 683 atgctagaggtggctttctcgatttcctttccaatgacctcagggatgaacttggacacg 624
Query: 503 agttctttaaggtcacatgtagaagcctggttgatcataatctcaaccatcttgcggcga 562
|||||||| || |||| || ||||| |||||| |||| || ||| |||||| || |||
Sbjct: 623 agttctttcagaccacaagttgaagcttggttgctcatgatttcagtcatcttccgacga 564
Query: 563 atctgccgaatctgggatgcctgagcatagcaggttctcttgacctggtttgggcgcctc 622
||||| | || ||| ||| ||||||||||| || | ||| || || || || ||||||
Sbjct: 563 atctgtctgatttggcttgcttgagcatagcaagtgcgcttcacttgattgggccgcctc 504
Query: 623 ttggtaaaaccaatgcagaacaaacgcagcatgtagttgtcggttgtcttgacatcaaca 682
||||| || ||||||||||||| ||| ||||||||||| ||||| |||||||||||||||
Sbjct: 503 ttggtgaacccaatgcagaacagacgtagcatgtagttatcggtggtcttgacatcaaca 444
Query: 683 tgggcttcaatcaatgtctgccacttctttactagagatctgagcttatcggtggtaaaa 742
|| || ||||| | |||||||| ||||| || || || | |||||||||||| || ||
Sbjct: 443 tgtgcctcaataagcgtctgccatttcttcaccagtgaacggagcttatcggtagtgaag 384
Query: 743 ttcatgccccagaagtttgtgagcacattcctgccttgcacatcttcagcacggagcctg 802
|||| ||||||||||||||||| ||||| || ||||| | ||| || ||||| || ||
Sbjct: 383 ctcataccccagaagtttgtgagaacatttctcccttgtatatcctctgcacgaagtcta 324
Query: 803 attttcctgtaagcctgatcctcgtcaccctgaagatcagctagacaaacctcaaagact 862
|| |||||||| ||||| || || |||| |||||||||||| | | |||||||| |||
Sbjct: 323 atcttcctgtatgcctggtcttcatcactctgaagatcagccaaggagacctcaaatact 264
Query: 863 ctgtgcttcagaccatcagaggcaatcctggtaccctgtgtcctggacacgagagtcttc 922
|||||||| | ||| |||||||||||| |||| |||||||||||||| || || |||||
Sbjct: 263 ctgtgctttaaaccctcagaggcaatcttggtgccctgtgtcctggagacaagggtcttg 204
Query: 923 ccaatgttgcgcacactgaagaccgatggggccttgatgtcataccagtccttcttagag 982
|| ||||||||||| ||||||||||| || |||||||| |||||||| ||||| || |
Sbjct: 203 ccgatgttgcgcacgctgaagaccgacggagccttgatatcataccaatcctttttgctg 144
Query: 983 aagggatcgacggtctttttcttaccacccttctttcccttggagat 1029
|| ||||| |||||||| ||||| || |||||||| |||||||||||
Sbjct: 143 aacggatccacggtcttcttcttgcctcccttcttgcccttggagat 97
>gb|BF480866.1|BF480866 FM1_14_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 488
Score = 313 bits (158), Expect = 2e-083
Identities = 281/322 (87%)
Strand = Plus / Minus
Query: 284 gcaacctcctgcatagcctcatcaccctcgacaggcctctcaagcttcacaccaacgtcc 343
||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 322 gcaacctcctgtccagcctcatctccctcgacgggcctctcaagcttcacgccaacatcc 263
Query: 344 tctttgtagtcgccatgaacctccatcaacttcccgagatcaaacttgggggccttgagt 403
||||| ||||| |||||||||||||| | |||||| || |||||||| |||||||| ||
Sbjct: 262 tctttatagtcaccatgaacctccataagcttcccaaggtcaaactttggggccttcagg 203
Query: 404 atcttcaccttgcggatgaagacgttttgaagtgggaagatgctggaggtagacttctca 463
|||||||||||||||||||| || || ||||| ||||||||||||||||||| ||||||
Sbjct: 202 atcttcaccttgcggatgaaaacattctgaagcgggaagatgctggaggtagctttctca 143
Query: 464 atctctttgccaataacttccggaatgaacttagaaacaagttctttaaggtcacatgta 523
|||||||||||||| ||||| || || ||||| ||||| || || ||||| ||||| | |
Sbjct: 142 atctctttgccaatcacttctggtataaactttgaaaccagctccttaagatcacaggaa 83
Query: 524 gaagcctggttgatcataatctcaaccatcttgcggcgaatctgccgaatctgggatgcc 583
|| |||||||| | |||||| || |||||||||||||| |||||||| ||||||||||||
Sbjct: 82 gaggcctggttcaccataatgtccaccatcttgcggcggatctgccggatctgggatgcc 23
Query: 584 tgagcatagcaggttctcttga 605
||||||||||| ||||||||||
Sbjct: 22 tgagcatagcacgttctcttga 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 428,327
Number of Sequences: 832831
Number of extensions: 428327
Number of successful extensions: 160891
Number of sequences better than 0.5: 145
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160517
Number of HSP's gapped (non-prelim): 318
length of query: 1154
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1134
effective length of database: 474,703,049
effective search space: 538313257566
effective search space used: 538313257566
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)