BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE364000.1|BE364000 PI1_11_H08.b1_A002 Pathogen induced ... 394 e-108
gb|BF588171.1|BF588171 FM1_38_F02.b1_A003 Floral-Induced Me... 394 e-108
gb|BG052315.1|BG052315 RHIZ2_12_B08.b1_A003 Rhizome2 (RHIZ2... 394 e-108
gb|BG158032.1|BG158032 EM1_7_E11.b1_A002 Embryo 1 (EM1) Sor... 394 e-108
gb|BI075461.1|BI075461 IP1_20_H01.b1_A002 Immature pannicle... 394 e-108
gb|BM324185.1|BM324185 PIC1_25_D04.b1_A002 Pathogen-infecte... 394 e-108
gb|CF481185.1|CF481185 POL1_70_B01.g1_A002 Pollen Sorghum b... 394 e-108
gb|CF482358.1|CF482358 POL1_6_B02.g1_A002 Pollen Sorghum bi... 394 e-108
gb|CF484857.1|CF484857 POL1_27_H11.g1_A002 Pollen Sorghum b... 394 e-108
gb|CF485152.1|CF485152 POL1_29_F04.g1_A002 Pollen Sorghum b... 394 e-108
gb|CF487598.1|CF487598 POL1_44_F09.g1_A002 Pollen Sorghum b... 394 e-108
gb|CF488684.1|CF488684 POL1_51_C07.g1_A002 Pollen Sorghum b... 394 e-108
gb|CF489955.1|CF489955 POL1_61_D02.g1_A002 Pollen Sorghum b... 394 e-108
gb|CN127033.1|CN127033 RHOH1_20_D08.g1_A002 Acid- and alkal... 394 e-108
gb|CN127559.1|CN127559 RHOH1_23_E07.g3_A002 Acid- and alkal... 394 e-108
gb|CN128476.1|CN128476 RHOH1_29_F09.g1_A002 Acid- and alkal... 394 e-108
gb|CN152800.1|CN152800 WOUND1_84_C01.g1_A002 Wounded leaves... 394 e-108
gb|CX618129.1|CX618129 GABR1_37_H01.g1_A002 GA- or brassino... 394 e-108
gb|BE356163.1|BE356163 DG1_123_C11.b1_A002 Dark Grown 1 (DG... 387 e-105
gb|CD205927.1|CD205927 HS1_19_F09.g1_A012 Heat-shocked seed... 387 e-105
gb|CD206141.1|CD206141 HS1_20_E03.g1_A012 Heat-shocked seed... 387 e-105
gb|CD206275.1|CD206275 HS1_21_A03.g1_A012 Heat-shocked seed... 387 e-105
gb|CD206551.1|CD206551 HS1_23_C06.g1_A012 Heat-shocked seed... 387 e-105
gb|CD210364.1|CD210364 HS1_50_F12.g1_A012 Heat-shocked seed... 387 e-105
gb|CD210904.1|CD210904 HS1_66_C12.g1_A012 Heat-shocked seed... 387 e-105
gb|CD214166.1|CD214166 HS1_70_H06.g1_A012 Heat-shocked seed... 387 e-105
gb|CD228602.1|CD228602 CCC1_8_G08.g1_A007 Callus culture/ce... 387 e-105
gb|CD229585.1|CD229585 CCC1_17_H07.g1_A007 Callus culture/c... 387 e-105
gb|CD231654.1|CD231654 SS1_22_F12.g1_A012 Salt-stressed see... 387 e-105
gb|CD232033.1|CD232033 SS1_31_C09.g1_A012 Salt-stressed see... 387 e-105
gb|CF486928.1|CF486928 POL1_40_E06.g1_A002 Pollen Sorghum b... 387 e-105
gb|CF488260.1|CF488260 POL1_48_F01.g1_A002 Pollen Sorghum b... 387 e-105
gb|CF770342.1|CF770342 DSBF1_7_E04.b1_A010 Drought-stressed... 383 e-104
gb|CN145951.1|CN145951 WOUND1_36_A05.g1_A002 Wounded leaves... 383 e-104
gb|BG052335.1|BG052335 RHIZ2_12_D08.b1_A003 Rhizome2 (RHIZ2... 381 e-103
gb|BG104083.1|BG104083 RHIZ2_40_C11.b1_A003 Rhizome2 (RHIZ2... 379 e-103
gb|CD213578.1|CD213578 HS1_41_G07.g1_A012 Heat-shocked seed... 379 e-103
gb|CD222021.1|CD222021 CCC1_1_H12.g1_A007 Callus culture/ce... 379 e-103
gb|CN151954.1|CN151954 WOUND1_78_G01.g1_A002 Wounded leaves... 379 e-103
gb|CD210642.1|CD210642 HS1_48_D07.g1_A012 Heat-shocked seed... 373 e-101
gb|BI075836.1|BI075836 IP1_21_G11.b1_A002 Immature pannicle... 371 e-100
gb|CN139384.1|CN139384 OX1_21_F05.g1_A002 Oxidatively-stres... 371 e-100
gb|BG947056.1|BG947056 IP1_2_A06.b1_A002 Immature pannicle ... 359 4e-097
gb|BM322339.1|BM322339 PIC1_3_E02.b1_A002 Pathogen-infected... 331 9e-089
gb|CD209742.1|CD209742 HS1_54_C02.g1_A012 Heat-shocked seed... 325 6e-087
gb|BG558413.1|BG558413 RHIZ2_67_B08.b1_A003 Rhizome2 (RHIZ2... 285 5e-075
gb|CD209950.1|CD209950 HS1_56_F11.b1_A012 Heat-shocked seed... 281 8e-074
gb|CW385824.1|CW385824 fsbb001f069h06f0 Sorghum methylation... 280 3e-073
gb|BI211796.1|BI211796 IP1_61_C01.b1_A002 Immature pannicle... 280 3e-073
gb|BF317921.1|BF317921 OV1_9_D09.b1_A002 Ovary 1 (OV1) Sorg... 276 5e-072
gb|BI246097.1|BI246097 IP1_68_G07.b1_A002 Immature pannicle... 272 7e-071
gb|BI211807.1|BI211807 IP1_61_D01.b1_A002 Immature pannicle... 270 3e-070
gb|BG560145.1|BG560145 RHIZ2_69_H05.b1_A003 Rhizome2 (RHIZ2... 268 1e-069
gb|CF431228.1|CF431228 NIT1_6_F07.g1_A002 Nitrogen-deficien... 252 7e-065
gb|BG947063.1|BG947063 IP1_2_B06.b1_A002 Immature pannicle ... 240 3e-061
gb|CF482518.1|CF482518 POL1_7_A09.g1_A002 Pollen Sorghum bi... 234 2e-059
gb|BG273561.1|BG273561 OV2_27_C02.b1_A002 Ovary 2 (OV2) Sor... 226 4e-057
gb|CD231647.1|CD231647 SS1_22_E10.g1_A012 Salt-stressed see... 224 2e-056
gb|CD428924.1|CD428924 ETH1_1_F06.g1_A002 Ethylene-treated ... 224 2e-056
gb|CF489022.1|CF489022 POL1_53_G06.g1_A002 Pollen Sorghum b... 224 2e-056
gb|CW135318.1|CW135318 104_519_11117780_148_34825_066 Sorgh... 220 2e-055
gb|CW170656.1|CW170656 104_581_11155324_148_36523_014 Sorgh... 220 2e-055
gb|CD210742.1|CD210742 HS1_49_D06.g1_A012 Heat-shocked seed... 216 4e-054
gb|BG102874.1|BG102874 RHIZ2_34_E01.b1_A003 Rhizome2 (RHIZ2... 186 3e-045
gb|CD230534.1|CD230534 SS1_44_G02.g1_A012 Salt-stressed see... 180 2e-043
gb|CL183573.1|CL183573 104_396_10898263_116_31924_103 Sorgh... 174 1e-041
gb|CL190450.1|CL190450 104_408_10906088_114_32484_022 Sorgh... 174 1e-041
gb|CW061558.1|CW061558 104_305_10520464_114_30152 Sorghum m... 174 1e-041
gb|CW188015.1|CW188015 104_607_11172792_148_36723_086 Sorgh... 174 1e-041
gb|CL170717.1|CL170717 104_371_10814018_148_31790_338 Sorgh... 172 5e-041
gb|CF427109.1|CF427109 PH1_3_A01.g1_A002 Phosphorous-defici... 172 5e-041
gb|CN127412.1|CN127412 RHOH1_22_H01.g3_A002 Acid- and alkal... 157 3e-036
gb|BZ369696.1|BZ369696 id10a07.b1 WGS-SbicolorF (DH5a methy... 131 2e-028
gb|CD231796.1|CD231796 SS1_23_D05.g1_A012 Salt-stressed see... 92 1e-016
gb|BI099037.1|BI099037 IP1_36_F01.b1_A002 Immature pannicle... 70 5e-010
gb|CW135317.1|CW135317 104_519_11117780_116_34829_066 Sorgh... 68 2e-009
gb|CD210750.1|CD210750 HS1_49_A12.g1_A012 Heat-shocked seed... 60 5e-007
gb|CW415858.1|CW415858 fsbb001f116c09k0 Sorghum methylation... 58 2e-006
gb|CW423766.1|CW423766 fsbb001f133l24k0 Sorghum methylation... 46 0.008
gb|CW492666.1|CW492666 fsbb001f283a23f0 Sorghum methylation... 40 0.48
gb|BE594404.1|BE594404 PI1_33_A09.b1_A002 Pathogen induced ... 40 0.48
gb|BE596259.1|BE596259 PI1_51_E06.b1_A002 Pathogen induced ... 40 0.48
gb|BE596359.1|BE596359 PI1_49_H07.b1_A002 Pathogen induced ... 40 0.48
gb|BE597651.1|BE597651 PI1_72_D10.b1_A002 Pathogen induced ... 40 0.48
gb|BG157878.1|BG157878 EM1_6_A06.b1_A002 Embryo 1 (EM1) Sor... 40 0.48
gb|BG947941.1|BG947941 IP1_7_D07.b1_A002 Immature pannicle ... 40 0.48
gb|BM325312.1|BM325312 PIC1_43_G07.b1_A002 Pathogen-infecte... 40 0.48
gb|CD208728.1|CD208728 HS1_39_D02.g1_A012 Heat-shocked seed... 40 0.48
gb|CD222244.1|CD222244 CCC1_2_A11.g1_A007 Callus culture/ce... 40 0.48
gb|CF430347.1|CF430347 PH1_27_H07.g1_A002 Phosphorous-defic... 40 0.48
gb|CF430470.1|CF430470 PH1_28_B08.g1_A002 Phosphorous-defic... 40 0.48
>gb|BE364000.1|BE364000 PI1_11_H08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 456 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 397
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 396 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 337
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 336 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 277
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 276 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 217
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 216 ctccattccattt 204
>gb|BF588171.1|BF588171 FM1_38_F02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 433
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 285 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 226
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 225 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 166
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 165 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 106
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 105 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 46
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 45 ctccattccattt 33
>gb|BG052315.1|BG052315 RHIZ2_12_B08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 499
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 467 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 408
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 407 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 348
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 347 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 288
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 287 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 228
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 227 ctccattccattt 215
>gb|BG158032.1|BG158032 EM1_7_E11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 498
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 366 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 307
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 306 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 247
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 246 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 187
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 186 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 127
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 126 ctccattccattt 114
>gb|BI075461.1|BI075461 IP1_20_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 479 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 420
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 419 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 360
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 359 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 300
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 299 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 240
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 239 ctccattccattt 227
>gb|BM324185.1|BM324185 PIC1_25_D04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 552
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 461 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 402
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 401 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 342
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 341 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 282
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 281 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 222
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 221 ctccattccattt 209
>gb|CF481185.1|CF481185 POL1_70_B01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_B01_A002 5', mRNA sequence
Length = 597
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 512 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 453
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 452 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 393
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 392 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 333
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 332 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 273
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 272 ctccattccattt 260
>gb|CF482358.1|CF482358 POL1_6_B02.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_6_B02_A002
5', mRNA sequence
Length = 777
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 476 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 417
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 416 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 357
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 356 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 297
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 296 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 237
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 236 ctccattccattt 224
>gb|CF484857.1|CF484857 POL1_27_H11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_27_H11_A002 5', mRNA sequence
Length = 573
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 480 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 420 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 360 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 300 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 241
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 240 ctccattccattt 228
>gb|CF485152.1|CF485152 POL1_29_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_29_F04_A002 5', mRNA sequence
Length = 552
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 462 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 403
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 402 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 343
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 342 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 283
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 282 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 223
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 222 ctccattccattt 210
>gb|CF487598.1|CF487598 POL1_44_F09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_44_F09_A002 5', mRNA sequence
Length = 677
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 479 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 420
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 419 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 360
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 359 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 300
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 299 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 240
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 239 ctccattccattt 227
>gb|CF488684.1|CF488684 POL1_51_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_C07_A002 5', mRNA sequence
Length = 581
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 435 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 376
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 375 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 316
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 315 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 256
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 255 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 196
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 195 ctccattccattt 183
>gb|CF489955.1|CF489955 POL1_61_D02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_D02_A002 5', mRNA sequence
Length = 703
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 468 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 409
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 408 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 349
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 348 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 289
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 288 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 229
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 228 ctccattccattt 216
>gb|CN127033.1|CN127033 RHOH1_20_D08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_20_D08_A002 5', mRNA sequence
Length = 840
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 468 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 409
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 408 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 349
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 348 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 289
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 288 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 229
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 228 ctccattccattt 216
>gb|CN127559.1|CN127559 RHOH1_23_E07.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_23_E07_A002 5', mRNA sequence
Length = 589
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 464 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 405
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 404 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 345
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 344 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 285
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 284 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 225
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 224 ctccattccattt 212
>gb|CN128476.1|CN128476 RHOH1_29_F09.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_29_F09_A002 5', mRNA sequence
Length = 801
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 465 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 406
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 405 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 346
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 345 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 286
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 285 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 226
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 225 ctccattccattt 213
>gb|CN152800.1|CN152800 WOUND1_84_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_84_C01_A002 5', mRNA sequence
Length = 761
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 465 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 406
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 405 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 346
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 345 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 286
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 285 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 226
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 225 ctccattccattt 213
>gb|CX618129.1|CX618129 GABR1_37_H01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_H01_A002 5', mRNA sequence
Length = 773
Score = 394 bits (199), Expect = e-108
Identities = 239/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 420 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 361
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 360 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 301
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 300 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 241
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 240 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 181
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 180 ctccattccattt 168
>gb|BE356163.1|BE356163 DG1_123_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||
Sbjct: 458 tgtacccacagatatctggaccaaacataatgctgtaaggtgtgtccccaccaaatttct 399
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 398 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 339
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 338 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 279
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 278 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 219
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 218 ctccattccattt 206
>gb|CD205927.1|CD205927 HS1_19_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_19_F09_A012 5', mRNA sequence
Length = 678
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 448 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 389
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 388 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 329
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 328 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 269
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 268 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 209
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 208 ctccattccattt 196
>gb|CD206141.1|CD206141 HS1_20_E03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_20_E03_A012 5', mRNA sequence
Length = 672
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 474 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 415
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 414 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 355
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 354 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 295
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 294 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 235
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 234 ctccattccattt 222
>gb|CD206275.1|CD206275 HS1_21_A03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_21_A03_A012 5', mRNA sequence
Length = 529
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 474 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 415
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 414 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 355
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 354 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 295
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 294 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 235
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 234 ctccattccattt 222
>gb|CD206551.1|CD206551 HS1_23_C06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_23_C06_A012 5', mRNA sequence
Length = 473
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 468 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 409
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 408 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 349
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 348 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 289
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 288 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 229
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 228 ctccattccattt 216
>gb|CD210364.1|CD210364 HS1_50_F12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_50_F12_A012 5', mRNA sequence
Length = 694
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 480 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 420 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 360 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 300 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 241
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 240 ctccattccattt 228
>gb|CD210904.1|CD210904 HS1_66_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_66_C12_A012 5', mRNA sequence
Length = 652
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 480 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 420 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 360 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 300 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 241
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 240 ctccattccattt 228
>gb|CD214166.1|CD214166 HS1_70_H06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_70_H06_A012 5', mRNA sequence
Length = 532
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 469 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 409 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 349 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 290
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 289 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 230
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 229 ctccattccattt 217
>gb|CD228602.1|CD228602 CCC1_8_G08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_G08_A007 5', mRNA sequence
Length = 627
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 469 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 409 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 349 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 290
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 289 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 230
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 229 ctccattccattt 217
>gb|CD229585.1|CD229585 CCC1_17_H07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_17_H07_A007 5', mRNA sequence
Length = 633
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 483 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 424
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 423 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 364
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 363 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 304
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 303 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 244
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 243 ctccattccattt 231
>gb|CD231654.1|CD231654 SS1_22_F12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_22_F12_A012 5', mRNA sequence
Length = 742
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 471 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 412
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 411 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 352
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 351 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 292
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 291 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 232
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 231 ctccattccattt 219
>gb|CD232033.1|CD232033 SS1_31_C09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_31_C09_A012 5', mRNA sequence
Length = 682
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 473 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 414
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 413 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 354
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 353 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 294
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 293 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 234
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 233 ctccattccattt 221
>gb|CF486928.1|CF486928 POL1_40_E06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_40_E06_A002 5', mRNA sequence
Length = 713
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 469 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
|| |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 409 tccggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 349 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 290
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 289 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 230
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 229 ctccattccattt 217
>gb|CF488260.1|CF488260 POL1_48_F01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_48_F01_A002 5', mRNA sequence
Length = 677
Score = 387 bits (195), Expect = e-105
Identities = 238/253 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 480 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 420 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |
Sbjct: 360 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcaggatact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 300 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 241
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 240 ctccattccattt 228
>gb|CF770342.1|CF770342 DSBF1_7_E04.b1_A010 Drought-stressed before flowering Sorghum bicolor
cDNA clone DSBF1_7_E04_A010 5', mRNA sequence
Length = 457
Score = 383 bits (193), Expect = e-104
Identities = 236/251 (94%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 457 tacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttctta 398
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 397 tggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcg 338
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 337 tgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactca 278
Query: 1023 gctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatct 1082
|||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 277 gctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatct 218
Query: 1083 ccattccattt 1093
|||||||||||
Sbjct: 217 ccattccattt 207
>gb|CN145951.1|CN145951 WOUND1_36_A05.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_A05_A002 5', mRNA sequence
Length = 438
Score = 383 bits (193), Expect = e-104
Identities = 236/251 (94%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
|||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 438 tacccacacatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttcttc 379
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 378 tggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcg 319
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 318 tgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactca 259
Query: 1023 gctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatct 1082
|||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 258 gctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatct 199
Query: 1083 ccattccattt 1093
|||||||||||
Sbjct: 198 ccattccattt 188
>gb|BG052335.1|BG052335 RHIZ2_12_D08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 481
Score = 381 bits (192), Expect = e-103
Identities = 239/254 (94%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagata-tctggtccaaacataatgctgtaagatgtgtctccaccaaatttc 899
|||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 467 tgtacccacagatagtctggtccaaacataatgctgtaaggtgtgtccccaccaaatttc 408
Query: 900 ttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgc 959
|||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 407 ttctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgc 348
Query: 960 tcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtat 1019
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 347 tcgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtac 288
Query: 1020 tcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggca 1079
|| |||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||
Sbjct: 287 tcagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggca 228
Query: 1080 tctccattccattt 1093
||||||||||||||
Sbjct: 227 tctccattccattt 214
>gb|BG104083.1|BG104083 RHIZ2_40_C11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 458
Score = 379 bits (191), Expect = e-103
Identities = 231/245 (94%)
Strand = Plus / Minus
Query: 849 cagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtct 908
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 458 cagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttcttctggtct 399
Query: 909 acatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttc 968
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 398 acatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcgtgcttc 339
Query: 969 acagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaa 1028
|||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 338 acagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactcagctgaa 279
Query: 1029 atggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctccattc 1088
|| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 278 atagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatctccattc 219
Query: 1089 cattt 1093
|||||
Sbjct: 218 cattt 214
>gb|CD213578.1|CD213578 HS1_41_G07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_41_G07_A012 5', mRNA sequence
Length = 684
Score = 379 bits (191), Expect = e-103
Identities = 237/253 (93%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 479 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 420
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 419 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 360
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 359 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 300
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| ||||| || |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 299 cagctgagatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 240
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 239 ctccattccattt 227
>gb|CD222021.1|CD222021 CCC1_1_H12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_H12_A007 5', mRNA sequence
Length = 510
Score = 379 bits (191), Expect = e-103
Identities = 237/253 (93%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 458 tgtacccacagatatgtggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 399
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 398 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 339
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 338 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 279
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 278 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 219
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 218 ctccattccattt 206
>gb|CN151954.1|CN151954 WOUND1_78_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_G01_A002 5', mRNA sequence
Length = 591
Score = 379 bits (191), Expect = e-103
Identities = 237/253 (93%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 469 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttcc 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
|||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||
Sbjct: 409 tctggtctacatcaccacccagcaatctgacataaccaccaccgcagtcaagcttctgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 349 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 290
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 289 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 230
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 229 ctccattccattt 217
>gb|CD210642.1|CD210642 HS1_48_D07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_48_D07_A012 5', mRNA sequence
Length = 570
Score = 373 bits (188), Expect = e-101
Identities = 236/253 (93%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 480 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 420 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 360 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||| || ||| ||||| |||| ||||||||||||||||||||||
Sbjct: 300 cagctgaaatagcatagacccngtagtcctcagaggtctgaatacctttgtcctcggcat 241
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 240 ctccattccattt 228
>gb|BI075836.1|BI075836 IP1_21_G11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 337
Score = 371 bits (187), Expect = e-100
Identities = 236/253 (93%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 334 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 275
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
|||||| |||||||||||||||||||||||| || ||||| |||||||||||||| || |
Sbjct: 274 tctggtatacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttgtgtt 215
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 214 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 155
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 154 cagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcat 95
Query: 1081 ctccattccattt 1093
|||||||||||||
Sbjct: 94 ctccattccattt 82
>gb|CN139384.1|CN139384 OX1_21_F05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_21_F05_A002 5', mRNA sequence
Length = 474
Score = 371 bits (187), Expect = e-100
Identities = 233/249 (93%)
Strand = Plus / Minus
Query: 845 cccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctg 904
||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||
Sbjct: 409 cccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaactttcttctg 350
Query: 905 gtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtg 964
||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 349 gtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcgtg 290
Query: 965 cttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggc 1024
|||||||||| | |||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct: 289 cttcacagagtattgcagcaccagggtcttatccttgctgctgaactcagggtactcagc 230
Query: 1025 tgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctcc 1084
|||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||
Sbjct: 229 tgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatctcc 170
Query: 1085 attccattt 1093
|||||||||
Sbjct: 169 attccattt 161
>gb|BG947056.1|BG947056 IP1_2_A06.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 485
Score = 359 bits (181), Expect = 4e-097
Identities = 238/255 (93%), Gaps = 2/255 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaa-atttc 899
||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||
Sbjct: 481 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccgatatttc 422
Query: 900 ttctggtctacatcaccaccc-agcaatttgacgtagccaccgccgcagtcaagcttctg 958
||||||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 421 ttctggtctacatcaccaccccagcaatttgacataaccaccaccgcagtcaagcttctg 362
Query: 959 ctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggta 1018
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 ctcgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggta 302
Query: 1019 ttcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggc 1078
|| |||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||
Sbjct: 301 ctcagctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggc 242
Query: 1079 atctccattccattt 1093
|||||||||||||||
Sbjct: 241 atctccattccattt 227
>gb|BM322339.1|BM322339 PIC1_3_E02.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 488
Score = 331 bits (167), Expect = 9e-089
Identities = 200/211 (94%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 221 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 162
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 161 tctggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgct 102
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 101 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtact 42
Query: 1021 cggctgaaatggcatagaacctgtaatcctc 1051
| |||||||| |||||||||||||| |||||
Sbjct: 41 cagctgaaatagcatagaacctgtagtcctc 11
>gb|CD209742.1|CD209742 HS1_54_C02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_54_C02_A012 5', mRNA sequence
Length = 282
Score = 325 bits (164), Expect = 6e-087
Identities = 223/242 (92%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 847 cacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggt 906
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 282 cacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttcttctggt 223
Query: 907 ctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgct 966
||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 222 ctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgctcgtgct 163
Query: 967 tcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctg 1026
|||||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||
Sbjct: 162 tcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactcagctg 103
Query: 1027 aaatggcatagaacctgtaatcctcggaggnntg-aatacctttgtcctcggcatctcca 1085
|||| |||| ||||| ||| ||||| |||| | |||||||||||||||||||||||||
Sbjct: 102 aaatagcattgaaccagtattcctcagaggtccgaaatacctttgtcctcggcatctcca 43
Query: 1086 tt 1087
||
Sbjct: 42 tt 41
>gb|BG558413.1|BG558413 RHIZ2_67_B08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 403
Score = 285 bits (144), Expect = 5e-075
Identities = 178/190 (93%)
Strand = Plus / Minus
Query: 904 ggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgt 963
|||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 403 ggtctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcgt 344
Query: 964 gcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcgg 1023
||||||||||||| |||||||||||||||||||||||| |||||||||||||||| || |
Sbjct: 343 gcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactcag 284
Query: 1024 ctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctc 1083
||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||
Sbjct: 283 ctgaaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatctc 224
Query: 1084 cattccattt 1093
||||||||||
Sbjct: 223 cattccattt 214
>gb|CD209950.1|CD209950 HS1_56_F11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_56_F11_A012 3', mRNA sequence
Length = 675
Score = 281 bits (142), Expect = 8e-074
Identities = 166/174 (95%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 276 tgtacccacagatatctggtccaaacataatgctgtaaggtgtgtccccaccaaatttct 335
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 336 tctggtctacatcaccacccagcaacttgacataaccaccaccgcagtcaagcttctgct 395
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcag 1014
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 396 cgtgcttcacagagaattgcagcaccagggtcttatccttgctgctgaactcag 449
>gb|CW385824.1|CW385824 fsbb001f069h06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f069h06, DNA
sequence
Length = 681
Score = 280 bits (141), Expect = 3e-073
Identities = 181/195 (92%)
Strand = Plus / Plus
Query: 873 ctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacg 932
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctgtaaggtgtgtccccaccaaatttcttctggtctacatcaccacccagcaatttgaca 305
Query: 933 tagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtc 992
|| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 306 taaccaccaccgcagtcaagcttctgctcgtgcttcacagagaattgcagcaccagggtc 365
Query: 993 ttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcg 1052
||||||||| |||||||||||||||| || |||||||| |||||||||||||| |||||
Sbjct: 366 ttatccttgctgctgaactcagggtactcagctgaaatagcatagaacctgtagtcctca 425
Query: 1053 gaggnntgaatacct 1067
|||| |||||||||
Sbjct: 426 gaggtctgaatacct 440
Score = 69.9 bits (35), Expect = 5e-010
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
|||||||||||||||||||||||||||||||||||
Sbjct: 132 tgtacccacagatatctggtccaaacataatgctg 166
Score = 61.9 bits (31), Expect = 1e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1063 tacctttgtcctcggcatctccattccattt 1093
|||||||||||||||||||||||||||||||
Sbjct: 512 tacctttgtcctcggcatctccattccattt 542
>gb|BI211796.1|BI211796 IP1_61_C01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 413
Score = 280 bits (141), Expect = 3e-073
Identities = 175/187 (93%)
Strand = Plus / Minus
Query: 907 ctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgct 966
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 413 ctacatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcgtgct 354
Query: 967 tcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctg 1026
|||||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||
Sbjct: 353 tcacagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactcagctg 294
Query: 1027 aaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctccat 1086
|||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||
Sbjct: 293 aaatagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatctccat 234
Query: 1087 tccattt 1093
|||||||
Sbjct: 233 tccattt 227
>gb|BF317921.1|BF317921 OV1_9_D09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 414
Score = 276 bits (139), Expect = 5e-072
Identities = 173/185 (93%)
Strand = Plus / Minus
Query: 909 acatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttc 968
||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 414 acatcaccacccagcaatttgacataaccaccaccgcagtcaagcttctgctcgtgcttc 355
Query: 969 acagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaa 1028
|||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 354 acagagaattgcagcaccagggtcttatccttgctgctgaactcagggtactcagctgaa 295
Query: 1029 atggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctccattc 1088
|| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 294 atagcatagaacctgtagtcctcagaggtctgaatacctttgtcctcggcatctccattc 235
Query: 1089 cattt 1093
|||||
Sbjct: 234 cattt 230
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 262,655
Number of Sequences: 832831
Number of extensions: 262655
Number of successful extensions: 69677
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69497
Number of HSP's gapped (non-prelim): 167
length of query: 1238
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1218
effective length of database: 474,703,049
effective search space: 578188313682
effective search space used: 578188313682
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)