BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.467
(758 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG103883.1|BG103883 RHIZ2_37_H11.b1_A003 Rhizome2 (RHIZ2... 759 0.0
gb|CW084853.1|CW084853 104_427_10946045_116_32511_017 Sorgh... 751 0.0
gb|CW022723.1|CW022723 104_162_10432017_5_30000 Sorghum met... 745 0.0
gb|BG049326.1|BG049326 OV1_18_E08.g1_A002 Ovary 1 (OV1) Sor... 743 0.0
gb|BG240152.1|BG240152 OV1_18_E08.b1_A002 Ovary 1 (OV1) Sor... 743 0.0
gb|BG241199.1|BG241199 OV1_39_D07.b1_A002 Ovary 1 (OV1) Sor... 743 0.0
gb|CW260760.1|CW260760 104_727_11229138_116_35196_069 Sorgh... 741 0.0
gb|CW294956.1|CW294956 104_776_11460674_148_35613_013 Sorgh... 741 0.0
gb|BG240879.1|BG240879 OV1_39_D07.g1_A002 Ovary 1 (OV1) Sor... 698 0.0
gb|AI724414.1|AI724414 RHIZ1_36_D07.y2_A001 Rhizome1 (RHIZ1... 674 0.0
gb|BZ369736.1|BZ369736 id10c07.g1 WGS-SbicolorF (DH5a methy... 658 0.0
gb|CW235410.1|CW235410 104_690_11214967_148_37411_020 Sorgh... 650 0.0
gb|AW565205.1|AW565205 LG1_328_E09.b1_A002 Light Grown 1 (L... 650 0.0
gb|BE362628.1|BE362628 DG1_88_E06.b1_A002 Dark Grown 1 (DG1... 642 0.0
gb|BE362702.1|BE362702 DG1_88_E06.g1_A002 Dark Grown 1 (DG1... 634 e-180
gb|CW081433.1|CW081433 104_419_10941795_116_32296_010 Sorgh... 571 e-161
gb|BG240190.1|BG240190 OV1_19_A04.b1_A002 Ovary 1 (OV1) Sor... 571 e-161
gb|BZ333627.1|BZ333627 hx71d10.g1 WGS-SbicolorF (JM107 adap... 549 e-154
gb|CW139958.1|CW139958 104_530_11135524_148_34917_010 Sorgh... 541 e-152
gb|CX611301.1|CX611301 ANR1_23_H03.g1_A002 Anaerobic roots ... 541 e-152
gb|CN141036.1|CN141036 OX1_49_A05.b1_A002 Oxidatively-stres... 533 e-150
gb|CN141119.1|CN141119 OX1_49_A05.g1_A002 Oxidatively-stres... 533 e-150
gb|CW452145.1|CW452145 fsbb001f192i17f0 Sorghum methylation... 498 e-139
gb|AW285925.2|AW285925 LG1_255_A05.b1_A002 Light Grown 1 (L... 482 e-134
gb|AW285944.2|AW285944 LG1_255_C05.b1_A002 Light Grown 1 (L... 482 e-134
gb|AW285935.2|AW285935 LG1_255_B05.b1_A002 Light Grown 1 (L... 478 e-133
gb|BG557327.1|BG557327 EM1_42_F01.b1_A002 Embryo 1 (EM1) So... 476 e-132
gb|CW252564.1|CW252564 104_715_11224580_116_35095_068 Sorgh... 474 e-132
gb|CW167380.1|CW167380 104_576_11153572_148_36679_006 Sorgh... 460 e-128
gb|CW084385.1|CW084385 104_427_10945762_116_32512_045 Sorgh... 452 e-125
gb|BZ369735.1|BZ369735 id10c07.b1 WGS-SbicolorF (DH5a methy... 418 e-115
gb|CW422938.1|CW422938 fsbb001f132i02f0 Sorghum methylation... 416 e-114
gb|BE360030.1|BE360030 DG1_60_C06.g2_A002 Dark Grown 1 (DG1... 414 e-114
gb|CW260761.1|CW260761 104_727_11229138_148_35200_069 Sorgh... 381 e-104
gb|AW678055.1|AW678055 WS1_13_C03.b1_A002 Water-stressed 1 ... 365 4e-099
gb|BE126165.1|BE126165 DG1_66_E12.b1_A002 Dark Grown 1 (DG1... 365 4e-099
gb|BE360654.1|BE360654 DG1_66_E12.b2_A002 Dark Grown 1 (DG1... 365 4e-099
gb|BE594570.1|BE594570 PI1_34_H02.b1_A002 Pathogen induced ... 365 4e-099
gb|BE596716.1|BE596716 PI1_58_G08.b1_A002 Pathogen induced ... 365 4e-099
gb|BE596986.1|BE596986 PI1_60_A03.b1_A002 Pathogen induced ... 365 4e-099
gb|BG355486.1|BG355486 EM1_17_A11.b1_A002 Embryo 1 (EM1) So... 365 4e-099
gb|BG355816.1|BG355816 EM1_17_A11.g1_A002 Embryo 1 (EM1) So... 365 4e-099
gb|BG412141.1|BG412141 OV2_38_D09.b1_A002 Ovary 2 (OV2) Sor... 365 4e-099
gb|BG412851.1|BG412851 OV2_35_F09.b1_A002 Ovary 2 (OV2) Sor... 365 4e-099
gb|BG649660.1|BG649660 RHIZ2_82_C05.b1_A003 Rhizome2 (RHIZ2... 365 4e-099
gb|BG933550.1|BG933550 WS1_4_G01.b1_A002 Water-stressed 1 (... 365 4e-099
gb|BG948796.1|BG948796 LG1_266_F11.b1_A002 Light Grown 1 (L... 365 4e-099
gb|BI074650.1|BI074650 IP1_14_G01.b1_A002 Immature pannicle... 365 4e-099
gb|BM324501.1|BM324501 PIC1_32_A06.b1_A002 Pathogen-infecte... 365 4e-099
gb|BE125960.1|BE125960 DG1_60_C06.b1_A002 Dark Grown 1 (DG1... 363 2e-098
gb|BG158528.1|BG158528 RHIZ2_41_E08.g1_A003 Rhizome2 (RHIZ2... 361 6e-098
gb|BE596640.1|BE596640 PI1_58_G08.g1_A002 Pathogen induced ... 353 1e-095
gb|BG412543.1|BG412543 OV2_35_F09.g1_A002 Ovary 2 (OV2) Sor... 353 1e-095
gb|BE596905.1|BE596905 PI1_60_A03.g1_A002 Pathogen induced ... 351 6e-095
gb|CD228753.1|CD228753 CCC1_9_G08.g1_A007 Callus culture/ce... 349 2e-094
gb|CD229567.1|CD229567 CCC1_16_A05.g1_A007 Callus culture/c... 349 2e-094
gb|BG104064.1|BG104064 RHIZ2_40_B02.b1_A003 Rhizome2 (RHIZ2... 345 4e-093
gb|BE360726.1|BE360726 DG1_66_E12.g2_A002 Dark Grown 1 (DG1... 343 1e-092
gb|BG411814.1|BG411814 OV2_38_D09.g1_A002 Ovary 2 (OV2) Sor... 343 1e-092
gb|BG605848.1|BG605848 RHIZ2_82_C05.g1_A003 Rhizome2 (RHIZ2... 343 1e-092
gb|CD229479.1|CD229479 CCC1_16_A05.b1_A007 Callus culture/c... 341 6e-092
gb|BF657388.1|BF657388 OV2_24_E02.g1_A002 Ovary 2 (OV2) Sor... 337 9e-091
gb|BE367628.1|BE367628 PI1_9_A09.g1_A002 Pathogen induced 1... 335 4e-090
gb|BG049477.1|BG049477 OV1_20_E05.g1_A002 Ovary 1 (OV1) Sor... 333 1e-089
gb|BG557096.1|BG557096 EM1_42_F01.g1_A002 Embryo 1 (EM1) So... 333 1e-089
gb|CF761576.1|CF761576 DSAF1_77_H11.b1_A011 Drought-stresse... 331 5e-089
gb|BG158787.1|BG158787 RHIZ2_44_C10.b1_A003 Rhizome2 (RHIZ2... 329 2e-088
gb|BG159375.1|BG159375 OV2_7_A08.g1_A002 Ovary 2 (OV2) Sorg... 329 2e-088
gb|CW264323.1|CW264323 104_733_11231225_148_35251_079 Sorgh... 327 9e-088
gb|CW156138.1|CW156138 104_559_11146521_116_36371_047 Sorgh... 319 2e-085
gb|CW340096.1|CW340096 104_841_11485621_116_36150_063 Sorgh... 319 2e-085
gb|CW340098.1|CW340098 104_841_11485622_116_36153_063 Sorgh... 319 2e-085
gb|BE360280.1|BE360280 DG1_62_H06.g1_A002 Dark Grown 1 (DG1... 319 2e-085
gb|CD228670.1|CD228670 CCC1_9_G08.b1_A007 Callus culture/ce... 319 2e-085
gb|CW084384.1|CW084384 104_427_10945762_114_32508_045 Sorgh... 313 1e-083
gb|CW340097.1|CW340097 104_841_11485621_148_36151_063 Sorgh... 313 1e-083
gb|AW678136.1|AW678136 WS1_13_C03.g1_A002 Water-stressed 1 ... 313 1e-083
gb|AW681068.1|AW681068 WS1_8_G08.b1_A002 Water-stressed 1 (... 313 1e-083
gb|BE366531.1|BE366531 PI1_34_H02.g1_A002 Pathogen induced ... 313 1e-083
gb|BG054265.1|BG054265 OV2_4_D06.g1_A002 Ovary 2 (OV2) Sorg... 313 1e-083
gb|BG158716.1|BG158716 RHIZ2_44_C10.g1_A003 Rhizome2 (RHIZ2... 313 1e-083
gb|BI074336.1|BI074336 IP1_14_G01.g1_A002 Immature pannicle... 313 1e-083
gb|CW302178.1|CW302178 104_786_11464586_148_35669_011 Sorgh... 309 2e-082
gb|BE363491.1|BE363491 WS1_63_H10.g1_A002 Water-stressed 1 ... 305 3e-081
gb|BM328990.1|BM328990 PIC1_32_A06.g1_A002 Pathogen-infecte... 305 3e-081
gb|CF771764.1|CF771764 DSBF1_23_G12.g1_A010 Drought-stresse... 305 3e-081
gb|CW340099.1|CW340099 104_841_11485622_148_36152_063 Sorgh... 303 1e-080
gb|CF771060.1|CF771060 DSBF1_13_D02.g1_A010 Drought-stresse... 303 1e-080
gb|CW452146.1|CW452146 fsbb001f192i17k0 Sorghum methylation... 299 2e-079
gb|BM317820.1|BM317820 WS1_63_H10.b9_A002 Water-stressed 1 ... 297 8e-079
gb|BE592311.1|BE592311 WS1_93_B02.g1_A002 Water-stressed 1 ... 295 3e-078
gb|BF586572.1|BF586572 FM1_29_H06.g1_A003 Floral-Induced Me... 293 1e-077
gb|BF586652.1|BF586652 FM1_29_H06.b1_A003 Floral-Induced Me... 293 1e-077
gb|BG103727.1|BG103727 RHIZ2_40_B02.g1_A003 Rhizome2 (RHIZ2... 289 2e-076
gb|CW456404.1|CW456404 fsbb001f201l17f0 Sorghum methylation... 281 5e-074
gb|CD430212.1|CD430212 ETH1_17_C05.g1_A002 Ethylene-treated... 281 5e-074
gb|CF771049.1|CF771049 DSBF1_13_C03.g1_A010 Drought-stresse... 266 3e-069
gb|CW139957.1|CW139957 104_530_11135524_116_34913_010 Sorgh... 238 6e-061
gb|CL164163.1|CL164163 104_358_10807716_116_31815_084 Sorgh... 232 4e-059
gb|BG273223.1|BG273223 OV2_28_D08.g1_A002 Ovary 2 (OV2) Sor... 228 6e-058
gb|AW680936.1|AW680936 WS1_8_G08.g1_A002 Water-stressed 1 (... 226 2e-057
gb|AW564172.1|AW564172 LG1_285_A09.b1_A002 Light Grown 1 (L... 222 4e-056
gb|BG054022.1|BG054022 OV2_1_D03.g1_A002 Ovary 2 (OV2) Sorg... 214 9e-054
gb|BG054431.1|BG054431 OV2_4_D06.b1_A002 Ovary 2 (OV2) Sorg... 210 1e-052
gb|BG240314.1|BG240314 OV1_20_E05.b1_A002 Ovary 1 (OV1) Sor... 210 1e-052
gb|BG273658.1|BG273658 OV2_28_D08.b1_A002 Ovary 2 (OV2) Sor... 210 1e-052
gb|BG947225.1|BG947225 IP1_3_A07.b1_A002 Immature pannicle ... 210 1e-052
gb|CF771061.1|CF771061 DSBF1_13_D03.g1_A010 Drought-stresse... 208 5e-052
gb|BG048827.1|BG048827 OV1_23_E06.b1_A002 Ovary 1 (OV1) Sor... 204 9e-051
gb|BG049118.1|BG049118 OV1_23_E06.g1_A002 Ovary 1 (OV1) Sor... 204 9e-051
gb|CF761401.1|CF761401 DSAF1_74_F08.b1_A011 Drought-stresse... 202 3e-050
gb|CW235409.1|CW235409 104_690_11214967_116_37407_020 Sorgh... 198 5e-049
gb|BG947138.1|BG947138 IP1_3_A07.g1_A002 Immature pannicle ... 198 5e-049
gb|AW680134.1|AW680134 WS1_4_G01.g1_A002 Water-stressed 1 (... 194 8e-048
gb|CF761301.1|CF761301 DSAF1_73_E06.b1_A011 Drought-stresse... 194 8e-048
gb|CW455851.1|CW455851 fsbb001f200o22f0 Sorghum methylation... 188 5e-046
gb|BE355814.1|BE355814 DG1_11_F06.b1_A002 Dark Grown 1 (DG1... 184 8e-045
gb|BE355950.1|BE355950 DG1_11_F06.g1_A002 Dark Grown 1 (DG1... 184 8e-045
gb|CF770903.1|CF770903 DSBF1_11_C10.g1_A010 Drought-stresse... 178 5e-043
gb|BE355538.1|BE355538 DG1_115_G08.b1_A002 Dark Grown 1 (DG... 172 3e-041
gb|BM324575.1|BM324575 PIC1_32_H11.b1_A002 Pathogen-infecte... 172 3e-041
gb|CD425418.1|CD425418 SA1_12_C12.b1_A002 Salicylic acid-tr... 172 3e-041
gb|CD425469.1|CD425469 SA1_12_C12.g1_A002 Salicylic acid-tr... 172 3e-041
gb|CF433287.1|CF433287 NIT1_26_D01.b1_A002 Nitrogen-deficie... 172 3e-041
gb|CF433336.1|CF433336 NIT1_26_D01.g1_A002 Nitrogen-deficie... 172 3e-041
gb|CN124039.1|CN124039 RHOH1_2_F07.b1_A002 Acid- and alkali... 172 3e-041
gb|CX607720.1|CX607720 ANR1_30_G10.b1_A002 Anaerobic roots ... 172 3e-041
gb|CX610255.1|CX610255 ANR1_17_C02.g1_A002 Anaerobic roots ... 172 3e-041
gb|CX615430.1|CX615430 GABR1_20_C11.b1_A002 GA- or brassino... 172 3e-041
gb|CX615514.1|CX615514 GABR1_20_C11.g1_A002 GA- or brassino... 172 3e-041
gb|CD430227.1|CD430227 ETH1_17_F02.g1_A002 Ethylene-treated... 167 2e-039
gb|CD463232.1|CD463232 ETH1_43_B10.b1_A002 Ethylene-treated... 165 7e-039
gb|CD463362.1|CD463362 ETH1_43_B10.g1_A002 Ethylene-treated... 165 7e-039
gb|CF761471.1|CF761471 DSAF1_75_F04.b1_A011 Drought-stresse... 163 3e-038
gb|CW205571.1|CW205571 104_634_11187136_148_36953_064 Sorgh... 161 1e-037
gb|AW746075.1|AW746075 WS1_39_E10.b1_A002 Water-stressed 1 ... 161 1e-037
gb|BE357392.1|BE357392 DG1_15_C06.b2_A002 Dark Grown 1 (DG1... 161 1e-037
gb|BQ656018.1|BQ656018 pRC0295 Sorghum halepense rhizome cD... 161 1e-037
gb|CX606512.1|CX606512 ANR1_3_A09.g1_A002 Anaerobic roots S... 161 1e-037
gb|DN552580.1|DN552580 pSHR-RT-A-H2_B04_C117 pSHR Sorghum h... 161 1e-037
gb|BF481923.1|BF481923 FM1_19_B01.b1_A003 Floral-Induced Me... 157 2e-036
gb|BF482008.1|BF482008 FM1_22_E06.b1_A003 Floral-Induced Me... 157 2e-036
gb|CX609204.1|CX609204 ANR1_11_G01.b1_A002 Anaerobic roots ... 157 2e-036
gb|BE593001.1|BE593001 WS1_93_B02.b1_A002 Water-stressed 1 ... 155 7e-036
gb|AW923535.1|AW923535 DG1_52_E08.g1_A002 Dark Grown 1 (DG1... 151 1e-034
gb|BG240597.1|BG240597 OV1_31_H01.b1_A002 Ovary 1 (OV1) Sor... 151 1e-034
gb|CD429538.1|CD429538 ETH1_14_G11.b1_A002 Ethylene-treated... 151 1e-034
gb|BG051094.1|BG051094 FM1_56_C01.b1_A003 Floral-Induced Me... 149 4e-034
gb|CF772701.1|CF772701 DSBF1_38_C11.g1_A010 Drought-stresse... 147 2e-033
gb|CX606427.1|CX606427 ANR1_3_A09.b1_A002 Anaerobic roots S... 145 7e-033
gb|CW035172.1|CW035172 104_265_10503006_114_30378 Sorghum m... 143 3e-032
gb|CF771048.1|CF771048 DSBF1_13_C02.g1_A010 Drought-stresse... 143 3e-032
gb|CD426294.1|CD426294 SA1_19_D02.g1_A002 Salicylic acid-tr... 141 1e-031
gb|BI351329.1|BI351329 IP1_70_C01.b1_A002 Immature pannicle... 139 4e-031
gb|BI140675.1|BI140675 IP1_52_D01.b1_A002 Immature pannicle... 137 2e-030
gb|BI246042.1|BI246042 IP1_68_A04.b1_A002 Immature pannicle... 137 2e-030
gb|BF481430.1|BF481430 FM1_19_B01.g1_A003 Floral-Induced Me... 135 7e-030
gb|BM329064.1|BM329064 PIC1_32_H11.g1_A002 Pathogen-infecte... 135 7e-030
gb|CD423887.1|CD423887 SA1_2_A04.b1_A002 Salicylic acid-tre... 133 3e-029
gb|CD423950.1|CD423950 SA1_2_A04.g1_A002 Salicylic acid-tre... 133 3e-029
gb|BI245623.1|BI245623 IP1_68_A04.g1_A002 Immature pannicle... 131 1e-028
gb|CN124310.1|CN124310 RHOH1_4_A06.b1_A002 Acid- and alkali... 127 2e-027
gb|AW923476.1|AW923476 DG1_52_E08.b1_A002 Dark Grown 1 (DG1... 123 2e-026
gb|BE353032.1|BE353032 DG1_3_F08.g1_A002 Dark Grown 1 (DG1)... 123 2e-026
gb|BI351330.1|BI351330 IP1_70_C02.b1_A002 Immature pannicle... 123 2e-026
gb|CN124384.1|CN124384 RHOH1_4_A06.g1_A002 Acid- and alkali... 123 2e-026
gb|CX615420.1|CX615420 GABR1_20_B11.b1_A002 GA- or brassino... 123 2e-026
gb|CW275583.1|CW275583 104_748_11405040_116_35381_082 Sorgh... 119 4e-025
gb|CW302781.1|CW302781 104_787_11464897_116_35674_013 Sorgh... 119 4e-025
gb|CW466762.1|CW466762 fsbb001f218c09f0 Sorghum methylation... 119 4e-025
gb|BE357951.1|BE357951 DG1_23_D01.b1_A002 Dark Grown 1 (DG1... 119 4e-025
gb|BE358027.1|BE358027 DG1_23_D01.g1_A002 Dark Grown 1 (DG1... 119 4e-025
gb|CX607807.1|CX607807 ANR1_30_G10.g1_A002 Anaerobic roots ... 119 4e-025
gb|BI140355.1|BI140355 IP1_52_D01.g1_A002 Immature pannicle... 117 2e-024
gb|CF481113.1|CF481113 POL1_70_C04.b1_A002 Pollen Sorghum b... 115 6e-024
gb|BF481877.1|BF481877 FM1_22_E06.g1_A003 Floral-Induced Me... 111 1e-022
gb|AI723968.1|AI723968 RHIZ1_25_B06.y1_A001 Rhizome1 (RHIZ1... 109 4e-022
gb|AW923831.1|AW923831 DG1_60_C06.g1_A002 Dark Grown 1 (DG1... 109 4e-022
gb|BE600480.1|BE600480 PI1_96_G09.g1_A002 Pathogen induced ... 109 4e-022
gb|BE601093.1|BE601093 PI1_96_G09.b1_A002 Pathogen induced ... 109 4e-022
gb|AW284734.1|AW284734 LG1_214_H02.g1_A002 Light Grown 1 (L... 107 1e-021
gb|AW676985.1|AW676985 DG1_3_F08.b1_A002 Dark Grown 1 (DG1)... 107 1e-021
gb|CX611225.1|CX611225 ANR1_23_H03.b1_A002 Anaerobic roots ... 107 1e-021
gb|CD461884.1|CD461884 SA1_31_E07.b1_A002 Salicylic acid-tr... 101 9e-020
gb|CW035531.1|CW035531 104_266_10503214_114_30376 Sorghum m... 96 6e-018
gb|CW318025.1|CW318025 104_810_11473726_148_35870_095 Sorgh... 96 6e-018
gb|CW105345.1|CW105345 104_474_11012851_148_34446_070 Sorgh... 94 2e-017
gb|CW105346.1|CW105346 104_474_11012851_148_34479_070 Sorgh... 94 2e-017
gb|CW130953.1|CW130953 104_513_11115401_116_34782_069 Sorgh... 94 2e-017
gb|CW186147.1|CW186147 104_604_11166414_148_36711_031 Sorgh... 94 2e-017
gb|CW422306.1|CW422306 fsbb001f131i16f0 Sorghum methylation... 94 2e-017
gb|CW252565.1|CW252565 104_715_11224580_148_35091_068 Sorgh... 92 9e-017
gb|CD461715.1|CD461715 SA1_34_H04.g2_A002 Salicylic acid-tr... 92 9e-017
gb|AI723887.1|AI723887 RHIZ1_30_C09.y1_A001 Rhizome1 (RHIZ1... 90 3e-016
gb|CW487864.1|CW487864 fsbb001f253o21k0 Sorghum methylation... 88 1e-015
gb|BE126096.1|BE126096 DG1_65_F07.g1_A002 Dark Grown 1 (DG1... 88 1e-015
gb|BG049216.1|BG049216 OV1_17_B01.g1_A002 Ovary 1 (OV1) Sor... 88 1e-015
gb|BG240032.1|BG240032 OV1_17_B01.b1_A002 Ovary 1 (OV1) Sor... 88 1e-015
gb|CL180216.1|CL180216 104_389_10895840_148_31907_368 Sorgh... 86 5e-015
gb|CW209423.1|CW209423 104_639_11189234_148_36987_007 Sorgh... 86 5e-015
gb|CW268629.1|CW268629 104_739_11401423_148_35312_024 Sorgh... 86 5e-015
gb|CW357657.1|CW357657 fsbb001f024g15f0 Sorghum methylation... 86 5e-015
gb|AW284101.1|AW284101 LG1_267_H03.g1_A002 Light Grown 1 (L... 86 5e-015
gb|BG240009.1|BG240009 OV1_31_H01.g1_A002 Ovary 1 (OV1) Sor... 86 5e-015
gb|BI351128.1|BI351128 IP1_70_C01.g1_A002 Immature pannicle... 86 5e-015
gb|CD430180.1|CD430180 ETH1_17_F02.b1_A002 Ethylene-treated... 86 5e-015
gb|CD430801.1|CD430801 ETH1_5_G02.b1_A002 Ethylene-treated ... 86 5e-015
gb|CD430857.1|CD430857 ETH1_5_G02.g1_A002 Ethylene-treated ... 86 5e-015
gb|BZ335792.1|BZ335792 hz26h07.b1 WGS-SbicolorF (JM107 adap... 80 3e-013
gb|CL183761.1|CL183761 104_396_10898386_114_31923_226 Sorgh... 80 3e-013
gb|CW092088.1|CW092088 104_454_10998936_114_33037_090 Sorgh... 80 3e-013
gb|CW201143.1|CW201143 104_626_11184414_116_36872_017 Sorgh... 80 3e-013
gb|BG051417.1|BG051417 FM1_56_C01.g1_A003 Floral-Induced Me... 78 1e-012
gb|CW209422.1|CW209422 104_639_11189234_116_36988_007 Sorgh... 74 2e-011
gb|CW438099.1|CW438099 fsbb001f155i17k0 Sorghum methylation... 74 2e-011
gb|AI724862.1|AI724862 RHIZ1_30_C03.y3_A001 Rhizome1 (RHIZ1... 74 2e-011
gb|BE355605.1|BE355605 DG1_115_G08.g1_A002 Dark Grown 1 (DG... 70 3e-010
gb|CL172239.1|CL172239 104_374_10890006_148_31774_294 Sorgh... 66 5e-009
gb|BE360237.1|BE360237 DG1_62_H06.b1_A002 Dark Grown 1 (DG1... 66 5e-009
gb|CW357658.1|CW357658 fsbb001f024g15k0 Sorghum methylation... 56 5e-006
gb|CW456405.1|CW456405 fsbb001f201l17k0 Sorghum methylation... 54 2e-005
gb|BE126042.1|BE126042 DG1_65_F07.b1_A002 Dark Grown 1 (DG1... 52 8e-005
gb|CW292466.1|CW292466 104_772_11414102_148_35584_055 Sorgh... 48 0.001
gb|CW233597.1|CW233597 104_687_11213531_116_37377_048 Sorgh... 46 0.005
gb|CW375862.1|CW375862 fsbb001f053g20f0 Sorghum methylation... 46 0.005
gb|CW459428.1|CW459428 fsbb001f206c19f0 Sorghum methylation... 46 0.005
gb|CW091512.1|CW091512 104_453_10998601_114_33030_007 Sorgh... 44 0.019
gb|CW292465.1|CW292465 104_772_11414102_116_35580_055 Sorgh... 44 0.019
gb|CW479116.1|CW479116 fsbb001f237g04f0 Sorghum methylation... 44 0.019
gb|CW029083.1|CW029083 104_256_10499473_116_30400 Sorghum m... 42 0.073
gb|CW030576.1|CW030576 104_258_10500313_116_30404 Sorghum m... 42 0.073
gb|CW221503.1|CW221503 104_656_11197943_116_37168_086 Sorgh... 42 0.073
gb|CW288148.1|CW288148 104_766_11411797_148_35535_055 Sorgh... 42 0.073
gb|CW379520.1|CW379520 fsbb001f058n08f0 Sorghum methylation... 42 0.073
gb|CW423986.1|CW423986 fsbb001f134b12f0 Sorghum methylation... 42 0.073
gb|BG355545.1|BG355545 EM1_17_G03.b1_A002 Embryo 1 (EM1) So... 42 0.073
gb|BG649489.1|BG649489 EM1_80_A03.b1_A002 Embryo 1 (EM1) So... 42 0.073
gb|CL175891.1|CL175891 104_381_10892763_116_31765_363 Sorgh... 40 0.29
gb|CL175892.1|CL175892 104_381_10892763_148_31764_363 Sorgh... 40 0.29
gb|CW025150.1|CW025150 104_226_10488012_116_30525 Sorghum m... 40 0.29
gb|CW265374.1|CW265374 104_734_11231840_116_35260_022 Sorgh... 40 0.29
gb|CW265375.1|CW265375 104_734_11231840_148_35264_022 Sorgh... 40 0.29
gb|CW271573.1|CW271573 104_743_11403069_116_35340_083 Sorgh... 40 0.29
gb|CW440113.1|CW440113 fsbb001f158j14k0 Sorghum methylation... 40 0.29
gb|CW440115.1|CW440115 fsbb001f158j16k0 Sorghum methylation... 40 0.29
gb|BE359023.1|BE359023 DG1_38_D04.b1_A002 Dark Grown 1 (DG1... 40 0.29
gb|BG159626.1|BG159626 OV2_7_A08.b1_A002 Ovary 2 (OV2) Sorg... 40 0.29
>gb|BG103883.1|BG103883 RHIZ2_37_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 543
Score = 759 bits (383), Expect = 0.0
Identities = 443/462 (95%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 79 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 138
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 198
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 199 accgcttccgccccggcaccgtcgccctccgtgagatccgcaagtaccagaagagcacgg 258
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 259 agctgctgatccgcaagctgccgttccagcgcctggtgcgcgagatcgcgcaggacttca 318
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcct 378
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 379 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 438
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcg 505
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 439 tcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctanagcgtcg 498
Query: 506 tcccggtggaggtggaagtagtagtcgccgtttctgtcatca 547
|| | ||||||||||||||||||||| |||||||||||||
Sbjct: 499 tctccgtggaggtggaagtagtagtcctagtttctgtcatca 540
>gb|CW084853.1|CW084853 104_427_10946045_116_32511_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946045, DNA
sequence
Length = 637
Score = 751 bits (379), Expect = 0.0
Identities = 505/543 (93%), Gaps = 3/543 (0%)
Strand = Plus / Plus
Query: 13 atctcaatctccctagcaatctctagcagcaga-tcctcgtgcgaagcaaagcgctagcc 71
||||||||||||| ||||||| | ||||| ||| ||||| |||||||||||| | ||||
Sbjct: 90 atctcaatctcccgagcaatcaccagcagaagaatcctccggcgaagcaaagcccaagcc 149
Query: 72 -cccttcgtactgtcccgatggcccgcacgaagcagacggcgaggaagtccactggcggc 130
|||| | ||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 150 tccctccccactcactcgatggcccgcacgaagcagacggcgaggaagtccaccggcggc 209
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 210 aaggcgccgaggaagcagctggcgacgaaggcggcgcgcaagtctgccccggcgaccggc 269
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 270 ggggtgaagaagccccaccgcttccgccccggcaccgtcgcgctccgtgagatccgcaag 329
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 330 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgggag 389
Query: 311 atcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcag 370
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atcgctcaagacttcaagactgacctccgcttccagagctccgccgtcgccgcgctgcag 449
Query: 371 gaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcac 430
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 450 gaggcggccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccatccac 509
Query: 431 gccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggag 490
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 510 gccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgcatccgtggggag 569
Query: 491 agggcctag-gcgtcgtcccggtggaggtggaagtagtagtcgccgtttctgtcatcact 549
||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||||| |
Sbjct: 570 agggcctagagcgtcgtcaccgtggaggaggaagtagtagtcctagtttctgtcatcagt 629
Query: 550 gtc 552
|||
Sbjct: 630 gtc 632
>gb|CW022723.1|CW022723 104_162_10432017_5_30000 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432017, DNA
sequence
Length = 662
Score = 745 bits (376), Expect = 0.0
Identities = 543/596 (91%), Gaps = 7/596 (1%)
Strand = Plus / Minus
Query: 95 cgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcagctggcc 154
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 662 cgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagcagctggcg 603
Query: 155 accaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccaccgtttc 214
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 602 acgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagccccaccgcttc 543
Query: 215 cgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggagctgctg 274
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 542 cgctccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacggagctgctg 483
Query: 275 atccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaagaccgac 334
|||||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 482 atccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttcaagactgac 423
Query: 335 ctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctcgtc 394
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 422 ctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcctacctcgtc 363
Query: 395 gggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgccc 454
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 362 gggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgccc 303
Query: 455 aaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcgtcccggtg 513
||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||
Sbjct: 302 aaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcgtcaccgtg 243
Query: 514 gaggtggaagtagtagtcgccgtttctgtcatcactgtctggctagaaggtgtagagatg 573
|||| ||||||||||||| ||||||||||||| |||| | ||||||||||||||||
Sbjct: 242 gaggaggaagtagtagtcctagtttctgtcatcagtgtcggatcagaaggtgtagagatg 183
Query: 574 tgccgggttct---gtagtttgggttatcggtcaaatcatgatgtagttgggtcttccct 630
||| ||||||| ||||||| ||| |||| |||||| | |||||| | ||| ||
Sbjct: 182 tgctgggttctttattagtttgtgtt---ggtcggatcatgcagaagttggttgttcact 126
Query: 631 gctgtaatttaactatgactatgcaatgacaatgaagttctcggttatcagttccc 686
|||||||||||||||| | |||||||| |||||||| || |||||||| ||||
Sbjct: 125 gctgtaatttaactatcatgatgcaatggtaatgaagtcgtcagttatcagctccc 70
>gb|BG049326.1|BG049326 OV1_18_E08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 564
Score = 743 bits (375), Expect = 0.0
Identities = 469/499 (93%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 14 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 73
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 74 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 133
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 134 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 193
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 194 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 253
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 254 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcct 313
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 373
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcg 505
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 374 tcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcg 433
Query: 506 tcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtctggctagaaggtg 565
|| | ||||||| |||||||| || ||||||||||||| |||| | ||||||||
Sbjct: 434 tcaccgtggaggaggaagtagagttcctagtttctgtcatcagtgtcggatcagaaggtg 493
Query: 566 tagagatgtgccgggttct 584
||||||||||| |||||||
Sbjct: 494 tagagatgtgctgggttct 512
>gb|BG240152.1|BG240152 OV1_18_E08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 543
Score = 743 bits (375), Expect = 0.0
Identities = 445/467 (95%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 72 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 131
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 132 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 191
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 251
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 252 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 311
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcct 371
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 431
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcg 505
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 432 tcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcg 491
Query: 506 tcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtc 552
|| | ||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 492 tcaccgtggaggaggaagtagtagtcctagtttctgtcatcagtgtc 538
>gb|BG241199.1|BG241199 OV1_39_D07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 743 bits (375), Expect = 0.0
Identities = 445/467 (95%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 69 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 128
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 129 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 188
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 189 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 248
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 249 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 308
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 309 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcct 368
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 369 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 428
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcg 505
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 429 tcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcg 488
Query: 506 tcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtc 552
|| | ||||||| ||||||||||||| ||||||||||||| ||||
Sbjct: 489 tcaccgtggaggaggaagtagtagtcctagtttctgtcatcagtgtc 535
>gb|CW260760.1|CW260760 104_727_11229138_116_35196_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229138, DNA
sequence
Length = 608
Score = 741 bits (374), Expect = 0.0
Identities = 488/522 (93%), Gaps = 3/522 (0%)
Strand = Plus / Plus
Query: 13 atctcaatctccctagcaatctctagcagcaga-tcctcgtgcgaagcaaagcgctagcc 71
||||||||||||| ||||||| | ||||| ||| ||||| |||||||||||| | ||||
Sbjct: 77 atctcaatctcccgagcaatcaccagcagaagaatcctccggcgaagcaaagcccaagcc 136
Query: 72 -cccttcgtactgtcccgatggcccgcacgaagcagacggcgaggaagtccactggcggc 130
|||| | ||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 137 tccctccccactcactcgatggcccgcacgaagcagacggcgaggaagtccaccggcggc 196
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 197 aaggcgccgaggaagcagctggcgacgaaggcggcgcgcaagtctgccccggcgaccggc 256
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 257 ggggtgaagaagccccaccgcttccgccccggcaccgtcgcgctccgtgagatccgcaag 316
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 317 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgggag 376
Query: 311 atcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcag 370
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atcgctcaagacttcaagactgacctccgcttccagagctccgccgtcgccgcgctgcag 436
Query: 371 gaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcac 430
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 437 gaggcggccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccatccac 496
Query: 431 gccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggag 490
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 497 gccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgcatccgtggggag 556
Query: 491 agggcctag-gcgtcgtcccggtggaggtggaagtagtagtc 531
||||||||| |||||||| | ||||||| |||||||||||||
Sbjct: 557 agggcctagagcgtcgtcaccgtggaggaggaagtagtagtc 598
>gb|CW294956.1|CW294956 104_776_11460674_148_35613_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11460674, DNA
sequence
Length = 725
Score = 741 bits (374), Expect = 0.0
Identities = 538/590 (91%), Gaps = 7/590 (1%)
Strand = Plus / Minus
Query: 101 aagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcagctggccaccaag 160
||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||
Sbjct: 725 aagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagcagctggcgacgaag 666
Query: 161 gcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccaccgtttccgcccc 220
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 665 gcggcgcgcaagtctgccccggcgaccggcggggtgaagaagccccaccgcttccgcccc 606
Query: 221 ggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggagctgctgatccgc 280
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacggagctgctgatccgc 546
Query: 281 aagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaagaccgacctccgc 340
|||||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 545 aagctgccgttccagcgcctggtgcgggagatcgctcaagacttcaagactgacctccgc 486
Query: 341 ttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctcgtcgggctc 400
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 485 ttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcctacctcgtcgggctc 426
Query: 401 ttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgcccaaggac 460
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 425 ttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcccaaggac 366
Query: 461 atccagctcgcccgccgtatccgtggggagagggcctag-gcgtcgtcccggtggaggtg 519
||||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||| |
Sbjct: 365 atccagctcgcccgccgcatccgtggggagagggcctagagcgtcgtcaccgtggaggag 306
Query: 520 gaagtagtagtcgccgtttctgtcatcactgtctggctagaaggtgtagagatgtgccgg 579
|||||||||||| ||||||||||||| |||| | ||||||||||||||||||| ||
Sbjct: 305 gaagtagtagtcctagtttctgtcatcagtgtcggatcagaaggtgtagagatgtgctgg 246
Query: 580 gttct---gtagtttgggttatcggtcaaatcatgatgtagttgggtcttccctgctgta 636
||||| ||||||| ||| |||| |||||| | |||||| | ||| ||||||||
Sbjct: 245 gttctttattagtttgtgtt---ggtcggatcatgcagaagttggttgttcactgctgta 189
Query: 637 atttaactatgactatgcaatgacaatgaagttctcggttatcagttccc 686
|||||||||| | |||||||| |||||||| || |||||||| ||||
Sbjct: 188 atttaactatcatgatgcaatggtaatgaagtcgtcagttatcagctccc 139
>gb|BG240879.1|BG240879 OV1_39_D07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 698 bits (352), Expect = 0.0
Identities = 434/460 (94%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 126 gcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcga 185
||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1 gcggcaaggcgccgaggaagcagctggcgacgaaggcggcgcgcaagtctgccccggcga 60
Query: 186 ccggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatcc 245
||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 61 ccggcggggtgaagaagccccaccgcttccgccccggcaccgtcgcgctccgtgagatcc 120
Query: 246 gcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgc 180
Query: 306 gtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgc 365
| |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 gggagatcgctcaagacttcaagactgacctccgcttccagagctccgccgtcgccgcgc 240
Query: 366 tgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcca 425
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaggaggcggccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcca 300
Query: 426 ttcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtg 485
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 tccacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgcatccgtg 360
Query: 486 gggagagggcctag-gcgtcgtcccggtggaggtggaagtagtagtcgccgtttctgtca 544
|||||||||||||| |||||||| | ||||||| ||||||||||||| ||||||||||
Sbjct: 361 gggagagggcctagagcgtcgtcaccgtggaggaggaagtagtagtcctagtttctgtca 420
Query: 545 tcactgtctggctagaaggtgtagagatgtgccgggttct 584
||| |||| | ||||||||||||||||||| |||||||
Sbjct: 421 tcagtgtcggatcagaaggtgtagagatgtgctgggttct 460
>gb|AI724414.1|AI724414 RHIZ1_36_D07.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 543
Score = 674 bits (340), Expect = 0.0
Identities = 480/525 (91%), Gaps = 5/525 (0%)
Strand = Plus / Minus
Query: 149 ctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccac 208
||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 537 ctggcgacgaaggcggcgcgcaagtctgctccggcgaccggcggagtgaagaagccccac 478
Query: 209 cgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggag 268
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 477 cgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacggag 418
Query: 269 ctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaag 328
|||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 417 ctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttcaag 358
Query: 329 accgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctac 388
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 357 actgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcctac 298
Query: 389 ctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatc 448
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 297 ctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatc 238
Query: 449 atgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctagg----cgtc 504
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 237 atgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcgtc 178
Query: 505 gtcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtctggct-agaagg 563
||| | ||||| ||||||||||||||| ||||||||||||| ||| ||| | ||||||
Sbjct: 177 gtctccgtggatgtggaagtagtagtcctagtttctgtcatcagtgtttggatcagaagg 118
Query: 564 tgtagagatgtgccgggttctgtagtttgggttatcggtcaaatcatgatgtagttgggt 623
||||||||||||| ||||||||||||||| ||| | |||| |||||| | |||||| |
Sbjct: 117 tgtagagatgtgctgggttctgtagtttgtgttgttggtcggatcatgcagaagttggtt 58
Query: 624 cttccctgctgtaatttaactatgactatgcaatgacaatgaagt 668
|| |||||||||||||||||| | |||||||| ||||||||
Sbjct: 57 ggtcactgctgtaatttaactatcatgatgcaatggtaatgaagt 13
>gb|BZ369736.1|BZ369736 id10c07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id10c07 5', DNA sequence
Length = 639
Score = 658 bits (332), Expect = 0.0
Identities = 493/544 (90%), Gaps = 7/544 (1%)
Strand = Plus / Plus
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 agctggcgacgaaggcggtgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 60
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 120
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 121 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 180
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggccgaggcct 240
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 300
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcg 505
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 301 tcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcg 360
Query: 506 tcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtctggctagaaggtg 565
|| | ||||||| ||||||||||||| ||||||||||||| |||| | ||||||||
Sbjct: 361 tcaccgtggaggaggaagtagtagtcctagtttctgtcatcagtgtcggatcagaaggtg 420
Query: 566 tagagatgtgccgggttct---gtagtttgggttatcggtcaaatcatgatgtagttggg 622
||||||||||| ||||||| ||||||| ||| |||| |||||| | ||||||
Sbjct: 421 tagagatgtgctgggttctttattagtttgtgtt---ggtcggatcatgcagaagttggt 477
Query: 623 tcttccctgctgtaatttaactatgactatgcaatgacaatgaagttctcggttatcagt 682
| ||| |||||||||||||||||| | |||||||| |||||||| || ||||||||
Sbjct: 478 tgttcactgctgtaatttaactatcatgatgcaatggtaatgaagtcgtcagttatcagc 537
Query: 683 tccc 686
||||
Sbjct: 538 tccc 541
>gb|CW235410.1|CW235410 104_690_11214967_148_37411_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214967, DNA
sequence
Length = 660
Score = 650 bits (328), Expect = 0.0
Identities = 480/528 (90%), Gaps = 7/528 (1%)
Strand = Plus / Plus
Query: 163 ggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccaccgtttccgccccgg 222
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 1 ggcgcgcaagtctgccccggcgaccggcggggtgaagaagccccaccgcttccgccccgg 60
Query: 223 caccgtcgcgctccgggagatccgcaagtaccagaagagcacggagctgctgatccgcaa 282
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccgtcgcgctccgtgagatccgcaagtaccagaagagcacggagctgctgatccgcaa 120
Query: 283 gctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaagaccgacctccgctt 342
|||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 121 gctgccgttccagcgcctggtgcgggagatcgctcaagacttcaagactgacctccgctt 180
Query: 343 ccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctcgtcgggctctt 402
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 ccagagctccgccgtcgccgcgctgcaggaggcggccgaggcctacctcgtcgggctctt 240
Query: 403 cgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgcccaaggacat 462
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcccaaggacat 300
Query: 463 ccagctcgcccgccgtatccgtggggagagggcctag-gcgtcgtcccggtggaggtgga 521
||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||| |||
Sbjct: 301 ccagctcgcccgccgcatccgtggggagagggcctagagcgtcgtcaccgtggaggagga 360
Query: 522 agtagtagtcgccgtttctgtcatcactgtctggctagaaggtgtagagatgtgccgggt 581
|||||||||| ||||||||||||| |||| | ||||||||||||||||||| ||||
Sbjct: 361 agtagtagtcctagtttctgtcatcagtgtcggatcagaaggtgtagagatgtgctgggt 420
Query: 582 tct---gtagtttgggttatcggtcaaatcatgatgtagttgggtcttccctgctgtaat 638
||| ||||||| ||| |||| |||||| | |||||| | ||| ||||||||||
Sbjct: 421 tctttattagtttgtgtt---ggtcggatcatgcagaagttggttgttcactgctgtaat 477
Query: 639 ttaactatgactatgcaatgacaatgaagttctcggttatcagttccc 686
|||||||| | |||||||| |||||||| || |||||||| ||||
Sbjct: 478 ttaactatcatgatgcaatggtaatgaagtcgtcagttatcagctccc 525
>gb|AW565205.1|AW565205 LG1_328_E09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 627
Score = 650 bits (328), Expect = 0.0
Identities = 394/416 (94%)
Strand = Plus / Plus
Query: 84 tcccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaagga 143
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |
Sbjct: 59 tcccgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccccgca 118
Query: 144 agcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagc 203
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 119 agcagctggcgaccaaggcggcgcgcaagtcggccccggcgaccggcggcgtgaagaagc 178
Query: 204 cccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagca 263
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 179 cccaccgcttccgccccggcaccgtcgcgctccgcgagatccgcaagtaccagaagagca 238
Query: 264 cggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggact 323
|||||||||||||||||||||| || |||||||| || ||||| |||||||| |||||||
Sbjct: 239 cggagctgctgatccgcaagctccccttccagcggctcgtgcgggagatcgcgcaggact 298
Query: 324 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgagg 383
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 299 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggccgccgagg 358
Query: 384 cctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtca 443
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 359 cctacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtca 418
Query: 444 ccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag 499
||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 419 ccatcatgcccaaggacatccagcttgcgcgccgcatccgtggcgagagggcctag 474
>gb|BE362628.1|BE362628 DG1_88_E06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 642 bits (324), Expect = 0.0
Identities = 393/416 (94%)
Strand = Plus / Plus
Query: 84 tcccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaagga 143
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |
Sbjct: 80 tcccgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaagacgccccgca 139
Query: 144 agcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagc 203
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 140 agcagctggcgaccaaggcggcgcgcaagtcggccccggcgaccggcggcgtgaagaagc 199
Query: 204 cccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagca 263
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 200 cccaccgcttccgccccggcaccgtcgcgctccgcgagatccgcaagtaccagaagagca 259
Query: 264 cggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggact 323
|||||||||||||||||||||| || |||||||| || ||||| |||||||| |||||||
Sbjct: 260 cggagctgctgatccgcaagctccccttccagcggctcgtgcgggagatcgcgcaggact 319
Query: 324 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgagg 383
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggccgccgagg 379
Query: 384 cctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtca 443
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 cctacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtca 439
Query: 444 ccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag 499
||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 440 ccatcatgcccaaggacatccagcttgcgcgccgcatccgtggcgagagggcctag 495
>gb|BE362702.1|BE362702 DG1_88_E06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 497
Score = 634 bits (320), Expect = e-180
Identities = 389/412 (94%)
Strand = Plus / Plus
Query: 84 tcccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaagga 143
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |
Sbjct: 80 tcccgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaagacgccccgca 139
Query: 144 agcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagc 203
|||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 140 agcagctggcgaccaaggcggcgcgcaagtcggccccggcgaccggcggcgtgaagaagc 199
Query: 204 cccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagca 263
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 200 cccaccgcttccgccccggcaccgtcgcgctccgcgagatccgcaagtaccagaagagca 259
Query: 264 cggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggact 323
|||||||||||||||||||||| || |||||||| || ||||| |||||||| |||||||
Sbjct: 260 cggagctgctgatccgcaagctccccttccagcggctcgtgcgggagatcgcgcaggact 319
Query: 324 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgagg 383
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 tcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggccgccgagg 379
Query: 384 cctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtca 443
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 cctacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtca 439
Query: 444 ccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 440 ccatcatgcccaaggacatccagcttgcgcgccgcatccgtggcgagagggc 491
>gb|CW081433.1|CW081433 104_419_10941795_116_32296_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10941795, DNA
sequence
Length = 637
Score = 571 bits (288), Expect = e-161
Identities = 381/412 (92%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||
Sbjct: 26 gatggcccgcacgaagcagacggcgcgcaagtccaccggcggcaaggcgccgcggaagca 85
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||||||||||||||| || |||||||||||||| ||||||||||| ||
Sbjct: 86 gctggcgaccaaggcggcgcgcaagtcggcgccggcgaccggcggcgtgaagaagccgca 145
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 146 ccgcttccgcccgggcaccgtcgcgctccgcgagatccgcaagtaccagaagagcacgga 205
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
|||||| ||||||||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 206 gctgctcatccgcaagctccccttccagcgcctggtccgcgagatcgcgcaggacttcaa 265
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 266 gaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggccta 325
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 326 cctggtggggctcttcgaggacaccaacctctgcgccatccacgccaagcgggtcaccat 385
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag 499
|||||||||||||||||||||||||||||| ||||| |||||| | ||||||
Sbjct: 386 catgcccaaggacatccagctcgcccgccgcatccgcggggagcgcgcctag 437
>gb|BG240190.1|BG240190 OV1_19_A04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 453
Score = 571 bits (288), Expect = e-161
Identities = 372/400 (93%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
|||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||
Sbjct: 16 cgatggcccgcacgaagcagacggcgcgcaagtccaccggcggcaaggcgccgaggaagc 75
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||| |
Sbjct: 76 agctggcgacgaaggcggcgcggaagtcggcaccggcgaccggcggcgtgaagaagccgc 135
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||| |||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 136 accgcttccgcccgggcaccgtggcgctgcgcgagatccgcaagtaccagaagagcacgg 195
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
||||||| ||||||||||| ||||||||||||||||| || |||||||| ||||||||||
Sbjct: 196 agctgctcatccgcaagctcccgttccagcgcctggtccgcgagatcgcgcaggacttca 255
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 256 agaccgacctccggttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggcct 315
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 316 acctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcacca 375
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtgg 486
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 tcatgcccaaggacatccagctcgcccgccgcatccgtgg 415
>gb|BZ333627.1|BZ333627 hx71d10.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx71d10 5', DNA sequence
Length = 427
Score = 549 bits (277), Expect = e-154
Identities = 338/357 (94%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 143 aagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaag 202
||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 7 aagcagctggcgacca-ggcggcgcgcaagtcggccccggcgaccggcggcgtgaagaag 65
Query: 203 ccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagc 262
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 66 ccccaccgcttccgccccggcaccgtcgcgctccgcgagatccgcaagtaccagaagagc 125
Query: 263 acggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggac 322
||||||||||||||||||||||| || |||||||| || ||||| |||||||| ||||||
Sbjct: 126 acggagctgctgatccgcaagctccccttccagcggctcgtgcgggagatcgcgcaggac 185
Query: 323 ttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggccgccgag 245
Query: 383 gcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtc 442
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 246 gcctacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtc 305
Query: 443 accatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag 499
|||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 306 accatcatgcccaaggacatccagcttgcgcgccgcatccgtggcgagagggcctag 362
>gb|CW139958.1|CW139958 104_530_11135524_148_34917_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135524, DNA
sequence
Length = 720
Score = 541 bits (273), Expect = e-152
Identities = 378/413 (91%)
Strand = Plus / Minus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 550 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 491
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 490 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 431
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 430 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 371
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 370 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 311
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggc 384
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 310 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggc 251
Query: 385 ctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcac 444
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 250 gtacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcac 191
Query: 445 catcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 190 catcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 138
>gb|CX611301.1|CX611301 ANR1_23_H03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_H03_A002 5', mRNA sequence
Length = 737
Score = 541 bits (273), Expect = e-152
Identities = 378/413 (91%)
Strand = Plus / Plus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 78 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 137
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 138 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 197
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 198 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 257
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 258 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 317
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggc 384
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 318 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggc 377
Query: 385 ctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcac 444
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 378 gtacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcac 437
Query: 445 catcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 438 catcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 490
>gb|CN141036.1|CN141036 OX1_49_A05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_A05_A002 3', mRNA sequence
Length = 745
Score = 533 bits (269), Expect = e-150
Identities = 377/413 (91%)
Strand = Plus / Plus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 91 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 150
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 151 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 210
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 211 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 270
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 271 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 330
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggc 384
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 331 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggc 390
Query: 385 ctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcac 444
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 391 gtacctcgtcgggctcttcgaggacaccaacctttgcgccatccacgccaagcgcgtcac 450
Query: 445 catcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 451 catcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 503
>gb|CN141119.1|CN141119 OX1_49_A05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_A05_A002 5', mRNA sequence
Length = 719
Score = 533 bits (269), Expect = e-150
Identities = 377/413 (91%)
Strand = Plus / Plus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 80 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 139
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 140 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 199
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 200 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 259
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 260 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 319
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggc 384
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 320 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggc 379
Query: 385 ctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcac 444
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 380 gtacctcgtcgggctcttcaaggacaccaacctctgcgccatccacgccaagcgcgtcac 439
Query: 445 catcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 440 catcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 492
>gb|CW452145.1|CW452145 fsbb001f192i17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192i17, DNA
sequence
Length = 730
Score = 498 bits (251), Expect = e-139
Identities = 371/411 (90%)
Strand = Plus / Minus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
|||||||||||||||||||||||||| | ||||| || |||||||||||||| ||||||
Sbjct: 725 cgatggcccgcacgaagcagacggcgcgcaagtcgacgggcggcaaggcgccgcggaagc 666
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||| ||||| ||||| || |||||||| ||||||||||| |
Sbjct: 665 agctggcgacgaaggcggcgcggaagtcggccccagccaccggcggcgtgaagaagccgc 606
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| ||||| || ||||| || ||||| || ||||||||||||||||||||||||||||
Sbjct: 605 accggttccggccgggcacggtggcgctgcgtgagatccgcaagtaccagaagagcacgg 546
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 545 agctgctgatccggaagctgccgttccagcggctggtgcgggagatcgcgcaggacttca 486
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcct 386
|||| |||||||| |||||| ||||||||| || |||||||||||||| |||||||||
Sbjct: 485 agacggacctccggttccagtcctccgccgtggcggcgctgcaggaggccgccgaggcct 426
Query: 387 acctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacca 446
||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 425 acctcgtggggctcttcgaggacaccaatctctgcgccatccacgccaagcgcgtcacca 366
Query: 447 tcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||||||| ||| | || ||||||||||
Sbjct: 365 tcatgcccaaggacatccagctcgcccgccgcatcaggggcgagagggcct 315
>gb|AW285925.2|AW285925 LG1_255_A05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 358
Score = 482 bits (243), Expect = e-134
Identities = 276/287 (96%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 72 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 131
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 132 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 191
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 251
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 252 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 311
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggag 373
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggag 358
>gb|AW285944.2|AW285944 LG1_255_C05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 358
Score = 482 bits (243), Expect = e-134
Identities = 276/287 (96%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 72 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 131
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 132 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 191
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 251
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 252 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 311
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcaggag 373
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agactgacctccgcttccagagctccgccgtcgccgcgctgcaggag 358
>gb|AW285935.2|AW285935 LG1_255_B05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 478 bits (241), Expect = e-133
Identities = 274/285 (96%)
Strand = Plus / Plus
Query: 87 cgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagc 146
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 72 cgatggcccgcacgaagcagacggcgaggaagtccaccggcggcaaggcgccgaggaagc 131
Query: 147 agctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccc 206
||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 132 agctggcgacgaaggcggcgcgcaagtctgccccggcgaccggcggggtgaagaagcccc 191
Query: 207 accgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgg 266
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 accgcttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacgg 251
Query: 267 agctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttca 326
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 252 agctgctgatccgcaagctgccgttccagcgcctggtgcgggagatcgctcaagacttca 311
Query: 327 agaccgacctccgcttccagagctccgccgtcgccgcgctgcagg 371
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agactgacctccgcttccagagctccgccgtcgccgcgctgcagg 356
>gb|BG557327.1|BG557327 EM1_42_F01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 443
Score = 476 bits (240), Expect = e-132
Identities = 332/363 (91%)
Strand = Plus / Plus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 81 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 140
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 141 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 200
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 201 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 260
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 261 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 320
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggc 384
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 321 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgaggc 380
Query: 385 ctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcac 444
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gtacctcgtcgggctcttcnaggacaccaacctctgcgccatccacgccaagcgcgtcac 440
Query: 445 cat 447
|||
Sbjct: 441 cat 443
>gb|CW252564.1|CW252564 104_715_11224580_116_35095_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224580, DNA
sequence
Length = 656
Score = 474 bits (239), Expect = e-132
Identities = 326/355 (91%)
Strand = Plus / Minus
Query: 143 aagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaag 202
||||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||
Sbjct: 656 aagcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaag 597
Query: 203 ccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagc 262
|| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 596 ccgcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagc 537
Query: 263 acggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggac 322
||||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||
Sbjct: 536 acggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggac 477
Query: 323 ttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgag 382
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 476 ttcaagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggaggccgccgag 417
Query: 383 gcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtc 442
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 416 gcgtacctcgtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtc 357
Query: 443 accatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
||||||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 356 accatcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 302
>gb|CW167380.1|CW167380 104_576_11153572_148_36679_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153572, DNA
sequence
Length = 669
Score = 460 bits (232), Expect = e-128
Identities = 367/412 (89%)
Strand = Plus / Minus
Query: 86 ccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaag 145
||||||||||||||||||||||||||| | ||||| || |||||||||||||| |||||
Sbjct: 612 ccgatggcccgcacgaagcagacggcgcgcaagtcgaccggcggcaaggcgccgcggaag 553
Query: 146 cagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccc 205
|||||||||||||||||||| |||||||| || ||||| || ||||| |||||||||||
Sbjct: 552 cagctggccaccaaggcggcacgcaagtcggcaccggccacgggcggcgtgaagaagccg 493
Query: 206 caccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacg 265
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 492 caccggttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacg 433
Query: 266 gagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttc 325
|||||||| ||||| ||||| || ||||||||||| || || |||||||| |||||||||
Sbjct: 432 gagctgctcatccggaagctccccttccagcgcctcgtccgggagatcgcgcaggacttc 373
Query: 326 aagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcc 385
||||| ||||| || |||||| || || || || |||||||||||||| |||||||
Sbjct: 372 aagacggacctgcggttccagtcgtcggcggtggcggcgctgcaggaggccgccgaggcg 313
Query: 386 tacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcacc 445
||||| || |||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 312 tacctggtggggctcttcgaggacaccaacctctgcgccattcacgccaagagggtcacc 253
Query: 446 atcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
|||||||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 252 atcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 201
>gb|CW084385.1|CW084385 104_427_10945762_116_32512_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945762, DNA
sequence
Length = 613
Score = 452 bits (228), Expect = e-125
Identities = 363/408 (88%)
Strand = Plus / Minus
Query: 90 tggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcagc 149
||||||||||||||||||||||| | ||||| || |||||||||||||| |||||||||
Sbjct: 613 tggcccgcacgaagcagacggcgcgcaagtcgaccggcggcaaggcgccgcggaagcagc 554
Query: 150 tggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccacc 209
|||||||||||||||| |||||||| || ||||| || ||||| ||||||||||| ||||
Sbjct: 553 tggccaccaaggcggcacgcaagtcggcaccggccacgggcggcgtgaagaagccgcacc 494
Query: 210 gtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggagc 269
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 493 ggttccgccccggcaccgtcgcgctccgtgagatccgcaagtaccagaagagcacggagc 434
Query: 270 tgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaaga 329
|||| ||||| ||||| || ||||||||||| || || |||||||| |||||||||||||
Sbjct: 433 tgctcatccggaagctccccttccagcgcctcgtccgggagatcgcgcaggacttcaaga 374
Query: 330 ccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacc 389
| ||||| || |||||| || || || || |||||||||||||| ||||||| ||||
Sbjct: 373 cggacctgcggttccagtcgtcggcggtggcggcgctgcaggaggccgccgaggcgtacc 314
Query: 390 tcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatca 449
| || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 313 tggtggggctcttcgaggacaccaacctctgcgccattcacgccaagagggtcaccatca 254
Query: 450 tgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
|||||||||||||||||||||| ||||| ||| | || ||||||||||
Sbjct: 253 tgcccaaggacatccagctcgcgcgccgcatcaggggcgagagggcct 206
>gb|BZ369735.1|BZ369735 id10c07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id10c07 5', DNA sequence
Length = 568
Score = 418 bits (211), Expect = e-115
Identities = 371/419 (88%), Gaps = 9/419 (2%)
Strand = Plus / Minus
Query: 274 gatccgcaagctgccgttccagcgcctggtgcgtg-agatcgcccaggactt-caagacc 331
||||||||||||||||||||||||||||||||| | ||||||| || ||||| |||| |
Sbjct: 568 gatccgcaagctgccgttccagcgcctggtgcggggagatcgctcaagactttcaagtct 509
Query: 332 gacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 508 gacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcgtacctc 449
Query: 392 gtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatg 451
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 448 gtcgggctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatg 389
Query: 452 cccaaggacatccagctcgcccgccgtatccgtggggagagggcctag-gcgtcgtcccg 510
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 388 cccaaggacatccagctcgcccgccgcatccgtggggagagggcctagagcgtcgtcacc 329
Query: 511 gtggaggtggaagtagtagtcgccgtttctgtcatcactgtctggctagaaggtgtagag 570
||||||| ||||||||||||| ||||||||||||| |||| | |||||||||||||
Sbjct: 328 gtggaggaggaagtagtagtcctagtttctgtcatcagtgtcggatcagaaggtgtagag 269
Query: 571 atgtgccgggttct---gtagtttgggttatcggtcaaatcatgatgtagttgggtcttc 627
|||||| ||||||| ||||||| ||| |||| |||||| | |||||| | |||
Sbjct: 268 atgtgctgggttctttattagtttgtgtt---ggtcggatcatgcagaagttggttgttc 212
Query: 628 cctgctgtaatttaactatgactatgcaatgacaatgaagttctcggttatcagttccc 686
|||||||||||||||||| | |||||||| |||||||| || |||||||| ||||
Sbjct: 211 actgctgtaatttaactatcatgatgcaatggtaatgaagtcgtcagttatcagctccc 153
>gb|CW422938.1|CW422938 fsbb001f132i02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f132i02, DNA
sequence
Length = 639
Score = 416 bits (210), Expect = e-114
Identities = 322/358 (89%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 141 ggaagcagctggccaccaaggcggcgcgcaagtctgccccg-gcgaccggcggagtgaag 199
||||||||||||| || ||||||||||| ||||| |||| || |||||||| ||||||
Sbjct: 638 ggaagcagctggcgacgaaggcggcgcggaagtcgacccccagccaccggcggcgtgaag 579
Query: 200 aagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaag 259
||||| ||||| ||||| || ||||| || ||||| || |||||||||||||||||||||
Sbjct: 578 aagccgcaccggttccggccgggcacggtggcgctgcgtgagatccgcaagtaccagaag 519
Query: 260 agcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccag 319
|||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 518 agcacggagctgctgatccggaagctgccgttccagcggctggtgcgggagatcgcgcag 459
Query: 320 gacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtcc 379
||||||||||| |||||||| |||||| ||||||||| || |||||||||||||| ||
Sbjct: 458 gacttcaagacggacctccggttccagtcctccgccgtggcggcgctgcaggaggccgcc 399
Query: 380 gaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgc 439
|||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 398 gaggcctacctcgtggggctcttcgaggacaccaatctctgcgccatccacgccaagcgc 339
Query: 440 gtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcct 497
|||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||
Sbjct: 338 gtcaccatcatgcccaaggacatccagctcgcccgccgcatcaggggcgagagggcct 281
>gb|BE360030.1|BE360030 DG1_60_C06.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 414 bits (209), Expect = e-114
Identities = 280/304 (92%)
Strand = Plus / Plus
Query: 194 gtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtac 253
||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 7 gtgaagaagccgcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtac 66
Query: 254 cagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatc 313
|||||||||||||||||||| ||||||||||| |||||||||||||| || || ||||||
Sbjct: 67 cagaagagcacggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatc 126
Query: 314 gcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggag 373
|| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 127 gcgcaggatttcaagaccgacctccgcttccagtcctccgccgtcgccgcgctgcaggag 186
Query: 374 gcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgcc 433
|| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 187 gccgccgaggcgtacctcgtcgggctcttcgaggacaccaacctntgcgccatccacgcc 246
Query: 434 aagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagg 493
|||||||||||||||||||||||||||||||||||||| ||||| ||| | || ||||||
Sbjct: 247 aagcgcgtcaccatcatgcccaaggacatccagctcgcgcgccgcatcaggggcgagagg 306
Query: 494 gcct 497
||||
Sbjct: 307 gcct 310
>gb|CW260761.1|CW260761 104_727_11229138_148_35200_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229138, DNA
sequence
Length = 569
Score = 381 bits (192), Expect = e-104
Identities = 328/371 (88%), Gaps = 7/371 (1%)
Strand = Plus / Minus
Query: 320 gacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtcc 379
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 567 gacttcaagactgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcggcc 508
Query: 380 gaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgc 439
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 507 gaggcctacctcgtcgggctcttcgaggacaccaacctntgcgccatccacgccaagcgc 448
Query: 440 gtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggagagggcctag 499
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 447 gtcaccatcatgcccaaggacatccagctcgcccgccgcatccgtggggagagggcctag 388
Query: 500 -gcgtcgtcccggtggaggtggaagtagtagtcgccgtttctgtcatcactgtctggcta 558
|||||||| | ||||||| ||||||||||||| ||||||||||||| |||| | |
Sbjct: 387 agcgtcgtcaccgtggaggaggaagtagtagtcctagtttctgtcatcagtgtcggatca 328
Query: 559 gaaggtgtagagatgtgccgggttct---gtagtttgggttatcggtcaaatcatgatgt 615
|||||||||||||||||| ||||||| ||||||| ||| |||| |||||| |
Sbjct: 327 gaaggtgtagagatgtgctgggttctttattagtttgtgtt---ggtcggatcatgcaga 271
Query: 616 agttgggtcttccctgctgtaatttaactatgactatgcaatgacaatgaagttctcggt 675
|||||| | ||| |||||||||||||||||| | |||||||| |||||||| || ||
Sbjct: 270 agttggttgttcactgctgtaatttaactatcatgatgcaatggtaatgaagtcgtcagt 211
Query: 676 tatcagttccc 686
|||||| ||||
Sbjct: 210 tatcagctccc 200
>gb|AW678055.1|AW678055 WS1_13_C03.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 519
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 79 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 138
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 139 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 198
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 199 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 258
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 259 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 318
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 319 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 378
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 438
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 439 catgcccaaggacatccagctcgcacgccgcatccg 474
>gb|BE126165.1|BE126165 DG1_66_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 505
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 80 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 139
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 140 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 199
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 200 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 259
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 260 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 319
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 320 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 379
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 439
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 440 catgcccaaggacatccagctcgcacgccgcatccg 475
>gb|BE360654.1|BE360654 DG1_66_E12.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 517
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 80 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 139
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 140 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 199
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 200 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 259
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 260 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 319
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 320 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 379
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 439
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 440 catgcccaaggacatccagctcgcacgccgcatccg 475
>gb|BE594570.1|BE594570 PI1_34_H02.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 538
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 94 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 153
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 154 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 213
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 214 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 273
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 274 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 333
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 334 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 393
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 394 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 453
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 454 catgcccaaggacatccagctcgcacgccgcatccg 489
>gb|BE596716.1|BE596716 PI1_58_G08.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 529
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 83 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 142
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 143 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 202
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 203 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 262
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 263 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 322
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 323 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 382
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 442
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 443 catgcccaaggacatccagctcgcacgccgcatccg 478
>gb|BE596986.1|BE596986 PI1_60_A03.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 93 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 152
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 153 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 212
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 213 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 272
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 273 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 332
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 333 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 392
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 393 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 452
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 453 catgcccaaggacatccagctcgcacgccgcatccg 488
>gb|BG355486.1|BG355486 EM1_17_A11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 91 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 150
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 151 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 210
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 211 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 270
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 271 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 330
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 331 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 390
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 391 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 450
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 451 catgcccaaggacatccagctcgcacgccgcatccg 486
>gb|BG355816.1|BG355816 EM1_17_A11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 623
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 19 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 78
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 79 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 138
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 139 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 198
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 199 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 258
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 259 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 318
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 319 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 378
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 379 catgcccaaggacatccagctcgcacgccgcatccg 414
>gb|BG412141.1|BG412141 OV2_38_D09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 524
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 83 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 142
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 143 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 202
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 203 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 262
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 263 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 322
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 323 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 382
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 442
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 443 catgcccaaggacatccagctcgcacgccgcatccg 478
>gb|BG412851.1|BG412851 OV2_35_F09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 527
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 82 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 141
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 142 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 201
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 202 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 261
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 262 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 321
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 322 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 381
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 382 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 441
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 442 catgcccaaggacatccagctcgcacgccgcatccg 477
>gb|BG649660.1|BG649660 RHIZ2_82_C05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 529
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 88 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 147
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 148 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 207
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 208 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 267
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 268 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 327
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 328 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 387
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 388 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 447
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 448 catgcccaaggacatccagctcgcacgccgcatccg 483
>gb|BG933550.1|BG933550 WS1_4_G01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 92 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 151
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 152 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 211
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 212 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 271
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 272 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 331
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 332 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 391
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 392 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 451
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 452 catgcccaaggacatccagctcgcacgccgcatccg 487
>gb|BG948796.1|BG948796 LG1_266_F11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 82 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 141
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 142 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 201
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 202 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 261
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 262 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 321
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 322 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 381
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 382 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 441
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 442 catgcccaaggacatccagctcgcacgccgcatccg 477
>gb|BI074650.1|BI074650 IP1_14_G01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 87 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 146
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 147 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 206
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 207 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 266
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 267 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 326
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 327 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 386
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 387 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 446
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 447 catgcccaaggacatccagctcgcacgccgcatccg 482
>gb|BM324501.1|BM324501 PIC1_32_A06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 514
Score = 365 bits (184), Expect = 4e-099
Identities = 343/396 (86%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | |||||||| || |||||||| || | |||||
Sbjct: 87 gatggcccgtacgaagcagaccgcccgcaagtccaccggaggcaaggccccgcgcaagca 146
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| ||||||||||||||| | ||||| || ||| |||| ||||| ||||||||||| ||
Sbjct: 147 gctcgccaccaaggcggcgaggaagtcagcgccgacgacgggcggcgtgaagaagccgca 206
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | | | ||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 207 caggtataggcccggtacggtggcgctccgcgagatccgcaagtaccagaagagcacgga 266
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||||||| ||||| || |||||||||||||| || || |||||||||||||||||
Sbjct: 267 gcttctgatccggaagctccccttccagcgcctggtccgcgaaatcgcccaggacttcaa 326
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| |||||||| ||||||||| |||||| ||||| |||||||| ||||||||||
Sbjct: 327 gacggacctccggttccagagccacgccgtgctggcgctccaggaggccgccgaggccta 386
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 387 cctcgtgggtctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccat 446
Query: 448 catgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||||||| ||||| |||||
Sbjct: 447 catgcccaaggacatccagctcgcacgccgcatccg 482
>gb|BE125960.1|BE125960 DG1_60_C06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 364
Score = 363 bits (183), Expect = 2e-098
Identities = 261/287 (90%)
Strand = Plus / Plus
Query: 85 cccgatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaa 144
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| | ||
Sbjct: 78 cccgatggcccgcacgaagcagacggcgcgcaagtccacgggcggcaaggcgccccgcaa 137
Query: 145 gcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcc 204
||||||||| |||||||| ||||||||||| || |||||||| || || |||||||||||
Sbjct: 138 gcagctggcgaccaaggctgcgcgcaagtcggcgccggcgacgggaggcgtgaagaagcc 197
Query: 205 ccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcac 264
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 198 gcaccgcttccgcccgggcaccgtggcgctccgtgagatccgcaagtaccagaagagcac 257
Query: 265 ggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggactt 324
||||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct: 258 ggagctgctcatccgcaagctcccgttccagcgcctcgtccgcgagatcgcgcaggactt 317
Query: 325 caagaccgacctccgcttccagagctccgccgtcgccgcgctgcagg 371
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 318 caagaccgacctccgcttccagtcctccgccgtcgccgcgctgcagg 364
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 210,598
Number of Sequences: 832831
Number of extensions: 210598
Number of successful extensions: 62036
Number of sequences better than 0.5: 247
Number of HSP's better than 0.5 without gapping: 246
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61373
Number of HSP's gapped (non-prelim): 386
length of query: 758
length of database: 491,359,669
effective HSP length: 20
effective length of query: 738
effective length of database: 474,703,049
effective search space: 350330850162
effective search space used: 350330850162
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)