BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.451
(1101 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134022.1|CN134022 OX1_19_F03.g1_A002 Oxidatively-stres... 1134 0.0
gb|CN128327.1|CN128327 RHOH1_28_E11.g1_A002 Acid- and alkal... 1112 0.0
gb|CN125824.1|CN125824 RHOH1_13_C04.g1_A002 Acid- and alkal... 1017 0.0
gb|CN128493.1|CN128493 RHOH1_29_H03.g1_A002 Acid- and alkal... 965 0.0
gb|CN125750.1|CN125750 RHOH1_13_C04.b1_A002 Acid- and alkal... 954 0.0
gb|CF487068.1|CF487068 POL1_41_C05.g1_A002 Pollen Sorghum b... 914 0.0
gb|CN128411.1|CN128411 RHOH1_29_H03.b1_A002 Acid- and alkal... 878 0.0
gb|BE917928.1|BE917928 OV1_7_G12.b1_A002 Ovary 1 (OV1) Sorg... 815 0.0
gb|CF484825.1|CF484825 POL1_27_E12.g1_A002 Pollen Sorghum b... 787 0.0
gb|CF482063.1|CF482063 POL1_76_G11.b1_A002 Pollen Sorghum b... 761 0.0
gb|CF490004.1|CF490004 POL1_61_H06.g1_A002 Pollen Sorghum b... 749 0.0
gb|CF484744.1|CF484744 POL1_27_E12.b1_A002 Pollen Sorghum b... 735 0.0
gb|CF485917.1|CF485917 POL1_34_C04.g1_A002 Pollen Sorghum b... 735 0.0
gb|CX607982.1|CX607982 ANR1_32_A01.b1_A002 Anaerobic roots ... 735 0.0
gb|CF482296.1|CF482296 POL1_6_C11.b1_A002 Pollen Sorghum bi... 731 0.0
gb|CF480018.1|CF480018 POL1_63_F08.b1_A002 Pollen Sorghum b... 728 0.0
gb|CN133937.1|CN133937 OX1_19_F03.b1_A002 Oxidatively-stres... 720 0.0
gb|CN127019.1|CN127019 RHOH1_20_C05.g1_A002 Acid- and alkal... 656 0.0
gb|CF487740.1|CF487740 POL1_45_D09.g1_A002 Pollen Sorghum b... 648 0.0
gb|CF488870.1|CF488870 POL1_52_E12.g1_A002 Pollen Sorghum b... 648 0.0
gb|CF489913.1|CF489913 POL1_61_H06.b1_A002 Pollen Sorghum b... 646 0.0
gb|CF489832.1|CF489832 POL1_59_H03.g1_A002 Pollen Sorghum b... 644 0.0
gb|CF482561.1|CF482561 POL1_7_E11.g1_A002 Pollen Sorghum bi... 638 0.0
gb|CN126336.1|CN126336 RHOH1_16_C02.g1_A002 Acid- and alkal... 634 e-180
gb|CF485850.1|CF485850 POL1_34_C04.b1_A002 Pollen Sorghum b... 622 e-176
gb|CN138806.1|CN138806 OX1_14_C04.b1_A002 Oxidatively-stres... 622 e-176
gb|CN130325.1|CN130325 RHOH1_40_F02.g1_A002 Acid- and alkal... 620 e-176
gb|CF487616.1|CF487616 POL1_44_H04.g1_A002 Pollen Sorghum b... 617 e-175
gb|CN135253.1|CN135253 OX1_31_C08.g1_A002 Oxidatively-stres... 617 e-175
gb|CN130427.1|CN130427 RHOH1_41_A03.g1_A002 Acid- and alkal... 613 e-173
gb|BE359886.1|BE359886 DG1_58_D11.b2_A002 Dark Grown 1 (DG1... 601 e-170
gb|CN129807.1|CN129807 RHOH1_37_B09.g1_A002 Acid- and alkal... 601 e-170
gb|AW678747.1|AW678747 WS1_1_F12.b2_A002 Water-stressed 1 (... 599 e-169
gb|BG462803.1|BG462803 EM1_45_G07.b1_A002 Embryo 1 (EM1) So... 599 e-169
gb|BE125843.1|BE125843 DG1_58_D11.b1_A002 Dark Grown 1 (DG1... 581 e-164
gb|CN138871.1|CN138871 OX1_14_C04.g1_A002 Oxidatively-stres... 581 e-164
gb|BF585951.1|BF585951 FM1_25_E11.b1_A003 Floral-Induced Me... 577 e-163
gb|CD225507.1|CD225507 CCC1_3_A09.g1_A007 Callus culture/ce... 571 e-161
gb|CF483341.1|CF483341 POL1_21_D01.g1_A002 Pollen Sorghum b... 571 e-161
gb|CX608062.1|CX608062 ANR1_32_A01.g1_A002 Anaerobic roots ... 557 e-157
gb|BG050948.1|BG050948 FM1_54_C10.b1_A003 Floral-Induced Me... 543 e-152
gb|CF486988.1|CF486988 POL1_41_C05.b1_A002 Pollen Sorghum b... 523 e-146
gb|BE917845.1|BE917845 OV1_7_G12.g1_A002 Ovary 1 (OV1) Sorg... 521 e-146
gb|AW678668.1|AW678668 WS1_1_F12.b1_A002 Water-stressed 1 (... 505 e-141
gb|BE595258.1|BE595258 PI1_48_A01.b1_A002 Pathogen induced ... 505 e-141
gb|BE598772.1|BE598772 PI1_82_E07.b1_A002 Pathogen induced ... 505 e-141
gb|BF421958.1|BF421958 FM1_9_G02.b2_A003 Floral-Induced Mer... 498 e-139
gb|BF585872.1|BF585872 FM1_25_E11.g1_A003 Floral-Induced Me... 484 e-135
gb|BE359922.1|BE359922 DG1_58_D11.g2_A002 Dark Grown 1 (DG1... 478 e-133
gb|BG051267.1|BG051267 FM1_54_C10.g1_A003 Floral-Induced Me... 476 e-132
gb|BG464043.1|BG464043 EM1_69_A02.b1_A002 Embryo 1 (EM1) So... 468 e-130
gb|BF421587.1|BF421587 FM1_9_G02.g1_A003 Floral-Induced Mer... 466 e-129
gb|CF482482.1|CF482482 POL1_7_E11.b1_A002 Pollen Sorghum bi... 466 e-129
gb|CF489790.1|CF489790 POL1_59_D08.g1_A002 Pollen Sorghum b... 466 e-129
gb|BG556706.1|BG556706 EM1_40_E09.g1_A002 Embryo 1 (EM1) So... 460 e-127
gb|BG462878.1|BG462878 EM1_45_G07.g1_A002 Embryo 1 (EM1) So... 458 e-127
gb|CF489739.1|CF489739 POL1_59_H03.b1_A002 Pollen Sorghum b... 458 e-127
gb|CN126250.1|CN126250 RHOH1_16_C02.b1_A002 Acid- and alkal... 458 e-127
gb|CF483993.1|CF483993 POL1_2_H11.b1_A002 Pollen Sorghum bi... 448 e-124
gb|BG054126.1|BG054126 OV2_1_E05.b1_A002 Ovary 2 (OV2) Sorg... 444 e-123
gb|AW678794.1|AW678794 WS1_1_F12.g1_A002 Water-stressed 1 (... 430 e-118
gb|BG158766.1|BG158766 RHIZ2_44_A06.b1_A003 Rhizome2 (RHIZ2... 426 e-117
gb|BG411102.1|BG411102 EM1_25_G05.b1_A002 Embryo 1 (EM1) So... 412 e-113
gb|BG556939.1|BG556939 EM1_40_E09.b1_A002 Embryo 1 (EM1) So... 412 e-113
gb|BG410758.1|BG410758 EM1_25_G05.g1_A002 Embryo 1 (EM1) So... 406 e-111
gb|BM324765.1|BM324765 PIC1_35_D03.b1_A002 Pathogen-infecte... 398 e-109
gb|CN130560.1|CN130560 RHOH1_42_G05.b1_A002 Acid- and alkal... 379 e-103
gb|BG158693.1|BG158693 RHIZ2_44_A06.g1_A003 Rhizome2 (RHIZ2... 375 e-102
gb|CD225399.1|CD225399 CCC1_3_A09.b1_A007 Callus culture/ce... 371 e-101
gb|AW564330.1|AW564330 LG1_290_C07.b1_A002 Light Grown 1 (L... 365 6e-099
gb|CN126944.1|CN126944 RHOH1_20_C05.b1_A002 Acid- and alkal... 359 4e-097
gb|CN125496.1|CN125496 RHOH1_11_A07.g1_A002 Acid- and alkal... 343 2e-092
gb|BG463103.1|BG463103 EM1_47_E08.b1_A002 Embryo 1 (EM1) So... 341 8e-092
gb|AW923717.1|AW923717 DG1_58_D11.g1_A002 Dark Grown 1 (DG1... 339 3e-091
gb|CF482377.1|CF482377 POL1_6_C11.g1_A002 Pollen Sorghum bi... 337 1e-090
gb|BM325008.1|BM325008 PIC1_38_F03.b1_A002 Pathogen-infecte... 335 5e-090
gb|AW677516.1|AW677516 DG1_8_E07.b1_A002 Dark Grown 1 (DG1)... 331 8e-089
gb|BE598438.1|BE598438 PI1_82_E07.g1_A002 Pathogen induced ... 331 8e-089
gb|BM329240.1|BM329240 PIC1_35_D03.g1_A002 Pathogen-infecte... 329 3e-088
gb|BE594951.1|BE594951 PI1_48_A01.g1_A002 Pathogen induced ... 327 1e-087
gb|CF483804.1|CF483804 POL1_24_G04.g1_A002 Pollen Sorghum b... 327 1e-087
gb|BG102733.1|BG102733 RHIZ2_36_F09.g1_A003 Rhizome2 (RHIZ2... 321 8e-086
gb|BG464371.1|BG464371 EM1_69_A02.g1_A002 Embryo 1 (EM1) So... 317 1e-084
gb|CF487660.1|CF487660 POL1_45_D09.b1_A002 Pollen Sorghum b... 307 1e-081
gb|CF757681.1|CF757681 DSAF1_20_H07.g1_A011 Drought-stresse... 307 1e-081
gb|CF488792.1|CF488792 POL1_52_E12.b1_A002 Pollen Sorghum b... 303 2e-080
gb|CF487531.1|CF487531 POL1_44_H04.b1_A002 Pollen Sorghum b... 295 4e-078
gb|CF484064.1|CF484064 POL1_2_H11.g1_A002 Pollen Sorghum bi... 293 2e-077
gb|BM329482.1|BM329482 PIC1_38_F03.g1_A002 Pathogen-infecte... 291 7e-077
gb|BG103557.1|BG103557 RHIZ2_38_A03.g1_A003 Rhizome2 (RHIZ2... 287 1e-075
gb|CF480106.1|CF480106 POL1_63_F08.g1_A002 Pollen Sorghum b... 283 2e-074
gb|AW679549.1|AW679549 WS1_29_B07.g1_A002 Water-stressed 1 ... 254 2e-065
gb|BG054034.1|BG054034 OV2_1_E05.g1_A002 Ovary 2 (OV2) Sorg... 254 2e-065
gb|CF479929.1|CF479929 POL1_62_E06.g1_A002 Pollen Sorghum b... 254 2e-065
gb|BF421588.1|BF421588 FM1_9_G03.g1_A003 Floral-Induced Mer... 238 9e-061
gb|BM329161.1|BM329161 PIC1_34_B06.g1_A002 Pathogen-infecte... 232 6e-059
gb|AW746044.1|AW746044 WS1_39_B10.b1_A002 Water-stressed 1 ... 214 1e-053
gb|AW746183.1|AW746183 WS1_39_B10.g1_A002 Water-stressed 1 ... 214 1e-053
gb|AW747657.1|AW747657 WS1_74_G07.g1_A002 Water-stressed 1 ... 214 1e-053
gb|AW925048.1|AW925048 WS1_74_G07.b1_A002 Water-stressed 1 ... 214 1e-053
gb|CF481625.1|CF481625 POL1_73_C04.b1_A002 Pollen Sorghum b... 200 2e-049
gb|CF481708.1|CF481708 POL1_73_C04.g1_A002 Pollen Sorghum b... 200 2e-049
gb|AI724218.1|AI724218 RHIZ1_7_C09.y2_A001 Rhizome1 (RHIZ1)... 194 1e-047
gb|CN130639.1|CN130639 RHOH1_42_G05.g1_A002 Acid- and alkal... 190 2e-046
gb|BG463187.1|BG463187 EM1_47_E08.g1_A002 Embryo 1 (EM1) So... 188 7e-046
gb|CN130354.1|CN130354 RHOH1_41_A03.b1_A002 Acid- and alkal... 178 7e-043
gb|CN135771.1|CN135771 OX1_38_H03.g1_A002 Oxidatively-stres... 178 7e-043
gb|CN129724.1|CN129724 RHOH1_37_B09.b1_A002 Acid- and alkal... 151 2e-034
gb|CW377942.1|CW377942 fsbb001f056h20k0 Sorghum methylation... 141 2e-031
gb|CW377941.1|CW377941 fsbb001f056h20f0 Sorghum methylation... 139 6e-031
gb|CF490055.1|CF490055 POL1_62_E06.b1_A002 Pollen Sorghum b... 125 9e-027
gb|CL159699.1|CL159699 104_349_10804451_114_31381_275 Sorgh... 111 1e-022
gb|CW164492.1|CW164492 104_572_11152016_148_36467_024 Sorgh... 111 1e-022
gb|CW458944.1|CW458944 fsbb001f205h09f0 Sorghum methylation... 111 1e-022
gb|BF421959.1|BF421959 FM1_9_G03.b2_A003 Floral-Induced Mer... 109 6e-022
gb|CW373346.1|CW373346 fsbb001f049k23f0 Sorghum methylation... 105 9e-021
gb|CF758117.1|CF758117 DSAF1_27_E11.g1_A011 Drought-stresse... 101 1e-019
gb|CF770021.1|CF770021 DSBF1_5_E10.b1_A010 Drought-stressed... 101 1e-019
gb|CF770105.1|CF770105 DSBF1_5_E10.g1_A010 Drought-stressed... 101 1e-019
gb|CW164491.1|CW164491 104_572_11152016_116_36468_024 Sorgh... 86 8e-015
gb|CF758258.1|CF758258 DSAF1_29_E03.g1_A011 Drought-stresse... 80 5e-013
gb|BZ347055.1|BZ347055 hw04g06.b1 WGS-SbicolorF (JM107 adap... 64 3e-008
gb|CW156841.1|CW156841 104_560_11146906_148_36381_047 Sorgh... 64 3e-008
gb|AW671626.1|AW671626 LG1_349_B09.b1_A002 Light Grown 1 (L... 44 0.027
gb|CW044889.1|CW044889 104_281_10509227_115_30234 Sorghum m... 40 0.42
gb|BG052156.1|BG052156 RHIZ2_6_H01.b1_A003 Rhizome2 (RHIZ2)... 40 0.42
gb|BG052231.1|BG052231 RHIZ2_7_G11.b1_A003 Rhizome2 (RHIZ2)... 40 0.42
gb|CD214178.1|CD214178 HS1_70_E07.g1_A012 Heat-shocked seed... 40 0.42
>gb|CN134022.1|CN134022 OX1_19_F03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_F03_A002 5', mRNA sequence
Length = 766
Score = 1134 bits (572), Expect = 0.0
Identities = 706/750 (94%), Gaps = 3/750 (0%)
Strand = Plus / Plus
Query: 5 gtccaaaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcc 61
||||||||||||||||||||||||||||| | || |||| |||||||||||||||||
Sbjct: 17 gtccaaaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcc 76
Query: 62 tcgctccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttcc 121
|||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 77 tcgcctccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgacc 136
Query: 122 accgggtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgac 181
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 accgggtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgac 196
Query: 182 cgaaggatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtc 241
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 197 cgaaggatctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtc 256
Query: 242 ttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgact 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 257 ttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgact 316
Query: 302 tctggtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcagg 361
|||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 317 tctggtcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggagg 376
Query: 362 cgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatct 421
|||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||
Sbjct: 377 cgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttct 436
Query: 422 gttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacact 481
|||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||
Sbjct: 437 gttatcaacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacact 496
Query: 482 gagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaacctt 541
| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 497 gggaagccaaggatgaggggtcccaagagggcctccaagatcaggaagctctttaacctt 556
Query: 542 aacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaag 601
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 557 tccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaag 616
Query: 602 aacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctc 661
| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 617 agcggcaagaaggtgagcaaggcacctaagatccagcggcttgtgacccccttgaccctc 676
Query: 662 cagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgag 721
||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 677 cagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaagaagaagtctgag 736
Query: 722 gctgctgagtaccagaagcttcttgcccag 751
||||||||||||||||||||||||||||||
Sbjct: 737 gctgctgagtaccagaagcttcttgcccag 766
>gb|CN128327.1|CN128327 RHOH1_28_E11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_28_E11_A002 5', mRNA sequence
Length = 730
Score = 1112 bits (561), Expect = 0.0
Identities = 672/709 (94%)
Strand = Plus / Plus
Query: 40 cgccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaa 99
|||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 22 cgccccccagcgctcgagctcctcgcctccatcgagctcgcgccgcaacgccaccatgaa 81
Query: 100 gttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacca 159
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 82 gttcaacatcgcgaacccgaccaccgggtgccagaagaagctggaaatcgatgacgacca 141
Query: 160 gaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctggg 219
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 142 gaagctgcgtgccttttatgaccgaaggatctcccaggaggtcagtggtgatgctctggg 201
Query: 220 tgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttccc 279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttccc 261
Query: 280 aatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactcc 339
|||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 262 aatgaagcaaggagttctgacttctggtcgtgttcgccttctgctccacaggggtactcc 321
Query: 340 ctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttg 399
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgcttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttg 381
Query: 400 catcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatga 459
|| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 382 tattgttagccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatga 441
Query: 460 tctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaa 519
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcttcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaa 501
Query: 520 gatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacata 579
|||||| ||||| || |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 502 gatcaggaagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacata 561
Query: 580 ccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacg 639
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||
Sbjct: 562 ccgcaggacattcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcg 621
Query: 640 gcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagag 699
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 622 gcttgtgacccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagag 681
Query: 700 gataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcc 748
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gatcgctaagaagaagtctgaggctgctgagtaccagaagcttcttgcc 730
>gb|CN125824.1|CN125824 RHOH1_13_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_C04_A002 5', mRNA sequence
Length = 699
Score = 1017 bits (513), Expect = 0.0
Identities = 650/695 (93%), Gaps = 3/695 (0%)
Strand = Plus / Plus
Query: 11 aaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgctc 67
||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 2 aaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcct 61
Query: 68 cctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccggg 127
|| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 62 ccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccggg 121
Query: 128 tgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagg 187
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaagg 181
Query: 188 atatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaag 247
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 182 atctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaag 241
Query: 248 atcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggt 307
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 242 atcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctggt 301
Query: 308 cgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaat 367
|||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 302 cgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaat 361
Query: 368 ggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatc 427
|||||||||||||||||||||||||||||||| || || |||||||||| |||||||||
Sbjct: 362 ggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagaccgttctgttatc 421
Query: 428 aacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaag 487
|||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 422 aacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacactgagaag 481
Query: 488 ccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaag 547
||||||||||||||||||||||||| |||||||||||| ||||| || || ||| ||||
Sbjct: 482 ccaaggatgaggggtcccaagaggggctccaagatcaggaagctctttaagctttccaag 541
Query: 548 gatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggc 607
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 542 gatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaagagcggc 601
Query: 608 aagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagagg 667
|||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 602 aagaaggtgagcaaggcacctaagatccggcggcttgtgacccccttgaccctccagagg 661
Query: 668 aagcgtgctagaatcgctgacaagaagaagaggat 702
||||| |||||||| ||||||||||||||||||||
Sbjct: 662 aagcgcgctagaattgctgacaagaagaagaggat 696
>gb|CN128493.1|CN128493 RHOH1_29_H03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_H03_A002 5', mRNA sequence
Length = 688
Score = 965 bits (487), Expect = 0.0
Identities = 640/689 (92%), Gaps = 4/689 (0%)
Strand = Plus / Plus
Query: 10 aaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgct 66
|||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 1 aaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcc 60
Query: 67 ccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgg 126
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccgg 120
Query: 127 gtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 186
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 180
Query: 187 gatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaa 246
||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 181 gatctcccaggaggtcagtggtgatgctctgggcgaggagttctagggttatgtcttcaa 240
Query: 247 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctgg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctgg 300
Query: 307 tcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaa 366
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 301 tcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaa 360
Query: 367 tggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttat 426
||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 361 tggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctgttat 420
Query: 427 caacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaa 486
||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 421 caacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacactgagaa 480
Query: 487 gccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaa 546
||| | |||||||||| ||||||||||||||||||||| ||||| || | |||| |||
Sbjct: 481 gcccatgatgaggggt-gcaagagggcctccaagatcaggaagctctttagcctttccaa 539
Query: 547 ggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacgg 606
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 540 ggatgatgatgtacgcaagtatgtgaacacatacagcaggacattcactaccaagagcgg 599
Query: 607 caagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagag 666
||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 600 caagaaggtgagcaaggcagctaagatccagcggcttgtgacccccttgaccctccagag 659
Query: 667 gaagcgtgctagaatcgctgacaagaaga 695
|||||| |||||||| |||||||||||||
Sbjct: 660 gaagcgcgctagaattgctgacaagaaga 688
>gb|CN125750.1|CN125750 RHOH1_13_C04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_13_C04_A002 3', mRNA sequence
Length = 820
Score = 954 bits (481), Expect = 0.0
Identities = 565/593 (95%)
Strand = Plus / Plus
Query: 221 gaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttccca 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttccca 64
Query: 281 atgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccc 340
||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 65 atgaagcaaggagttctgacttctggtcgtgttcgccttctgctccacaggggtactccc 124
Query: 341 tgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgc 400
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tgcttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgt 184
Query: 401 atcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgat 460
|| || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 185 attgttagccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatgat 244
Query: 461 ctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaag 520
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cttcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaag 304
Query: 521 atcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatac 580
||||| ||||| || |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 305 atcaggaagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacatac 364
Query: 581 cgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacgg 640
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 365 cgcaggacattcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcgg 424
Query: 641 cttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagagg 700
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 425 cttgtgacccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagagg 484
Query: 701 ataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaag 760
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atcgctaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaag 544
Query: 761 gaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttc 813
||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 545 gaacagagggatcgccgtagcgagagcttggccaagaggaggtccaagctttc 597
>gb|CF487068.1|CF487068 POL1_41_C05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_41_C05_A002 5', mRNA sequence
Length = 616
Score = 914 bits (461), Expect = 0.0
Identities = 571/607 (94%), Gaps = 3/607 (0%)
Strand = Plus / Plus
Query: 10 aaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgct 66
|||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 10 aaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcc 69
Query: 67 ccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgg 126
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 70 tccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccgg 129
Query: 127 gtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 186
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 189
Query: 187 gatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaa 246
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 190 gatctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaa 249
Query: 247 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctgg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 250 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctgg 309
Query: 307 tcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaa 366
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 310 tcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaa 369
Query: 367 tggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttat 426
||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 370 tggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctgttat 429
Query: 427 caacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaa 486
||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 430 caacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacactgagaa 489
Query: 487 gccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaa 546
||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |||
Sbjct: 490 gccaaggatgaggggtcccaagagggcctccaagatcaggaagctctttaacctttccaa 549
Query: 547 ggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacgg 606
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 550 ggatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaagagcgg 609
Query: 607 caagaag 613
|||||||
Sbjct: 610 caagaag 616
>gb|CN128411.1|CN128411 RHOH1_29_H03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_H03_A002 3', mRNA sequence
Length = 782
Score = 878 bits (443), Expect = 0.0
Identities = 540/571 (94%), Gaps = 1/571 (0%)
Strand = Plus / Plus
Query: 243 tcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgactt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 tcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgactt 60
Query: 303 ctggtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggc 362
||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 61 ctggtcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggc 120
Query: 363 gtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctg 422
||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 121 gtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctg 180
Query: 423 ttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactg 482
||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 181 ttatcaacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacactg 240
Query: 483 agaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaacctta 542
|||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 241 agaagccaaggatgaggggtcc-aagagggcctccaagatcaggaagctctttaaccttt 299
Query: 543 acaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaaga 602
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 300 ccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaaga 359
Query: 603 acggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctcc 662
||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 360 gtggcaagaaggtgagcaaggcacttaagatccagcggcttgtgacccccttgaccctcc 419
Query: 663 agaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgagg 722
|||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 420 agaggaagcgcgctagaattgctgacaagaagaagaggatcgctaagaagaagtctgagg 479
Query: 723 ctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcg 782
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 480 ctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggatcgccgtagcg 539
Query: 783 agagcttggccaagaggaggtccaagctttc 813
|||||||||||||||||||||||||||||||
Sbjct: 540 agagcttggccaagaggaggtccaagctttc 570
>gb|BE917928.1|BE917928 OV1_7_G12.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 515
Score = 815 bits (411), Expect = 0.0
Identities = 483/507 (95%)
Strand = Plus / Plus
Query: 95 atgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgac 154
||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 9 atgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctggaaatcgatgac 68
Query: 155 gaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgct 214
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 69 gaccagaagctgcgtgccttttatgaccgaaggatctcccaggaggtcagtggtgatgct 128
Query: 215 ctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggc 274
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ctgggcgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggc 188
Query: 275 ttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggc 334
||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 189 ttcccaatgaagcaaggagttctgacttctggtcgtgttcgccttctgctccacaggggt 248
Query: 335 actccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgt 394
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 249 actccctgcttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgt 308
Query: 395 ggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgag 454
||||| || || ||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 309 ggttgtattgttagccaagacctttctgttatcaacttggttattgttaagaagggtgag 368
Query: 455 aatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcc 514
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aatgatcttcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcc 428
Query: 515 tccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaac 574
||||||||||| ||||| || |||||| |||||||||||||||||||||||| ||||||
Sbjct: 429 tccaagatcaggaagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaac 488
Query: 575 acataccgcaggacattcactaccaag 601
|||||||||||||||||||||||||||
Sbjct: 489 acataccgcaggacattcactaccaag 515
>gb|CF484825.1|CF484825 POL1_27_E12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_27_E12_A002 5', mRNA sequence
Length = 546
Score = 787 bits (397), Expect = 0.0
Identities = 501/535 (93%), Gaps = 3/535 (0%)
Strand = Plus / Plus
Query: 10 aaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgct 66
|||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 10 aaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcc 69
Query: 67 ccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgg 126
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 70 tccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccgg 129
Query: 127 gtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 186
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 189
Query: 187 gatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaa 246
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 190 gatctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaa 249
Query: 247 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctgg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 250 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctgg 309
Query: 307 tcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaa 366
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 310 tcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaa 369
Query: 367 tggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttat 426
||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 370 tggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctgttat 429
Query: 427 caacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaa 486
||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 430 caacttggtgattgttaagaagggtgagaatgatcttcctgggttgactgacactgagaa 489
Query: 487 gccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaacctt 541
||||||||||||||||||||||||||||||||||||| | ||||| || ||||||
Sbjct: 490 gccaaggatgaggggtcccaagagggcctccaagatcgggaagctctttaacctt 544
>gb|CF482063.1|CF482063 POL1_76_G11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_76_G11_A002 3', mRNA sequence
Length = 700
Score = 761 bits (384), Expect = 0.0
Identities = 465/492 (94%)
Strand = Plus / Plus
Query: 322 gctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggag 381
|||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gctccacaggggtactccctgcttccgtggttatgggaggcgtaatggtgagcgcaggag 60
Query: 382 gaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgt 441
|||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||
Sbjct: 61 gaagtctgtccgtggttgtattgttagccaagacctttctgttatcaacttggtgattgt 120
Query: 442 gaagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgagggg 501
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 121 taagaagggtgagaatgatcttcctggtttgactgacactgagaagccaaggatgagggg 180
Query: 502 tcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacg 561
|||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||
Sbjct: 181 tcccaagagggcctccaagatcaggaagctctttaacctttccaaggatgatgatgtacg 240
Query: 562 caagtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaa 621
|||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 241 caagtatgtgaacacataccgcaggacattcactaccaagagcggcaagaaggtgagcaa 300
Query: 622 ggcacctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaat 681
||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 301 ggcacctaagatccagcggcttgtgacccccttgaccctccagaggaagcgcgctagaat 360
Query: 682 cgctgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagct 741
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgacaagaagaagaggatcgctaagaagaagtctgaggctgctgagtaccagaagct 420
Query: 742 tcttgcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggag 801
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 421 ccttgcccagaggctgaaggaacagagggatcgccgtagcgagagcttggccaagaggag 480
Query: 802 gtccaagctttc 813
||||||||||||
Sbjct: 481 gtccaagctttc 492
>gb|CF490004.1|CF490004 POL1_61_H06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_H06_A002 5', mRNA sequence
Length = 699
Score = 749 bits (378), Expect = 0.0
Identities = 450/474 (94%)
Strand = Plus / Minus
Query: 340 ctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttg 399
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ctgcttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttg 640
Query: 400 catcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatga 459
|| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 639 tattgttagccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatga 580
Query: 460 tctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaa 519
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcttcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaa 520
Query: 520 gatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacata 579
|||||| ||||| || |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 519 gatcaggaagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacata 460
Query: 580 ccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacg 639
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||
Sbjct: 459 ccgcaggacattcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcg 400
Query: 640 gcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagag 699
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 399 gcttgtgacccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagag 340
Query: 700 gataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaa 759
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gatcgctaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaa 280
Query: 760 ggaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttc 813
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 279 ggaacagagggatcgccgtagcgagagcttggccaagaggaggtccaagctttc 226
>gb|CF484744.1|CF484744 POL1_27_E12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_27_E12_A002 3', mRNA sequence
Length = 686
Score = 735 bits (371), Expect = 0.0
Identities = 443/467 (94%)
Strand = Plus / Plus
Query: 347 cgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtg 406
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1 cgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgtt 60
Query: 407 agccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcct 466
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 61 agccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatgatcttcct 120
Query: 467 ggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcaga 526
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagg 180
Query: 527 aagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcagg 586
||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 aagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacataccgcagg 240
Query: 587 acattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtg 646
|||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 241 acattcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcggcttgtg 300
Query: 647 acacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataact 706
|| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 301 acccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagaggatcgct 360
Query: 707 aagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacag 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacag 420
Query: 767 agggaccgccggagcgagagcttggccaagaggaggtccaagctttc 813
||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 agggatcgccgtagcgagagcttggccaagaggaggtccaagctttc 467
>gb|CF485917.1|CF485917 POL1_34_C04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_34_C04_A002 5', mRNA sequence
Length = 520
Score = 735 bits (371), Expect = 0.0
Identities = 472/505 (93%), Gaps = 3/505 (0%)
Strand = Plus / Plus
Query: 10 aaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgct 66
|||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 16 aaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcc 75
Query: 67 ccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgg 126
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 76 tccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccgg 135
Query: 127 gtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 186
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gtgccagaagaaactggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 195
Query: 187 gatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaa 246
||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 196 gatctcccagggggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaa 255
Query: 247 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctgg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 256 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctgg 315
Query: 307 tcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaa 366
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 316 tcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaa 375
Query: 367 tggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttat 426
||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 376 tggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctgttat 435
Query: 427 caacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaa 486
||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 436 caacttggtgattgttaagaagggtgagaatgatcttcctgggttgactgacactgagaa 495
Query: 487 gccaaggatgaggggtcccaagagg 511
||||||||||||||| |||||||||
Sbjct: 496 gccaaggatgagggggcccaagagg 520
>gb|CX607982.1|CX607982 ANR1_32_A01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_A01_A002 3', mRNA sequence
Length = 693
Score = 735 bits (371), Expect = 0.0
Identities = 446/471 (94%)
Strand = Plus / Plus
Query: 343 cttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcat 402
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 cttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtat 60
Query: 403 cgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatct 462
|| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 tgttagccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatgatct 120
Query: 463 gcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagat 522
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagat 180
Query: 523 cagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccg 582
||| ||||| || |||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 caggaagctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacataccg 240
Query: 583 caggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggct 642
|||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||
Sbjct: 241 caggacattcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcggct 300
Query: 643 tgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggat 702
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 301 tgtgacccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagaggat 360
Query: 703 aactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaagga 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgctaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaagga 420
Query: 763 acagagggaccgccggagcgagagcttggccaagaggaggtccaagctttc 813
||||||||| ||||| | |||||||||||||||||||||||||||||||||
Sbjct: 421 acagagggatcgccgtaacgagagcttggccaagaggaggtccaagctttc 471
>gb|CF482296.1|CF482296 POL1_6_C11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_C11_A002 3', mRNA sequence
Length = 687
Score = 731 bits (369), Expect = 0.0
Identities = 441/465 (94%)
Strand = Plus / Plus
Query: 349 tggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgag 408
||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 1 tggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttag 60
Query: 409 ccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctgg 468
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 61 ccaagacctttctgttatcaacttggtgattgttaagaagggtgagaatgatcttcctgg 120
Query: 469 tctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaa 528
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcaggaa 180
Query: 529 gctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggac 588
||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 gctctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggac 240
Query: 589 attcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgac 648
|||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 241 attcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcggcttgtgac 300
Query: 649 acccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaa 708
||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 301 ccccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaa 360
Query: 709 gaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagag 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagag 420
Query: 769 ggaccgccggagcgagagcttggccaagaggaggtccaagctttc 813
||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatcgccgtagcgagagcttggccaagaggaggtccaagctttc 465
>gb|CF480018.1|CF480018 POL1_63_F08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_63_F08_A002 3', mRNA sequence
Length = 688
Score = 728 bits (367), Expect = 0.0
Identities = 439/463 (94%)
Strand = Plus / Plus
Query: 351 gttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagcc 410
||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 1 gttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttagcc 60
Query: 411 aagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtc 470
||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 61 aagacctttctgttatcaacttggtgattgttaagaagggtgagaatgatcttcctggtt 120
Query: 471 tgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 tgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcaggaagc 180
Query: 531 tgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacat 590
| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 tctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggacat 240
Query: 591 tcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacac 650
|||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 241 tcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcggcttgtgaccc 300
Query: 651 ccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaaga 710
|||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 301 ccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaaga 360
Query: 711 agaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagaggg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagaggg 420
Query: 771 accgccggagcgagagcttggccaagaggaggtccaagctttc 813
| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 atcgccgtagcgagagcttggccaagaggaggtccaagctttc 463
>gb|CN133937.1|CN133937 OX1_19_F03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_F03_A002 3', mRNA sequence
Length = 671
Score = 720 bits (363), Expect = 0.0
Identities = 438/463 (94%)
Strand = Plus / Plus
Query: 351 gttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagcc 410
||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 1 gttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttagcc 60
Query: 411 aagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtc 470
||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 61 aagacctttctgttatcaacttggtgattgttaagaagggtgagaatgatcttcctggtt 120
Query: 471 tgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagc 530
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 tgactgacactgggaagccaaggatgaggggtcccaagagggcctccaagatcaggaagc 180
Query: 531 tgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacat 590
| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 tctttaacctttccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggacat 240
Query: 591 tcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacac 650
|||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 241 tcactaccaagagcggcaagaaggtgagcaaggcacctaagatccagcggcttgtgaccc 300
Query: 651 ccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaaga 710
|||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 301 ccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaaga 360
Query: 711 agaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagaggg 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagaggg 420
Query: 771 accgccggagcgagagcttggccaagaggaggtccaagctttc 813
| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 atcgccgtagcgagagcttggccaagaggaggtccaagctttc 463
>gb|CN127019.1|CN127019 RHOH1_20_C05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_20_C05_A002 5', mRNA sequence
Length = 719
Score = 656 bits (331), Expect = 0.0
Identities = 541/611 (88%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 96 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 155
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 156 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 215
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 216 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 275
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 276 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 335
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 336 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 395
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 396 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 455
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 456 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 515
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||
Sbjct: 516 gcatccaagatcaggaagctcgtcaacctttccaaggatgatgatgtacgcaagtatgtc 575
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 576 aacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaag 635
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| || ||||| || |||
Sbjct: 636 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaag 695
Query: 692 aagaagaggat 702
|||||||||||
Sbjct: 696 aagaagaggat 706
>gb|CF487740.1|CF487740 POL1_45_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_45_D09_A002 5', mRNA sequence
Length = 725
Score = 648 bits (327), Expect = 0.0
Identities = 540/611 (88%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 102 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 161
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 162 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 221
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 222 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 281
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 282 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 341
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 342 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 401
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| |||| |||||||||
Sbjct: 402 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcgttgtcaagaagggt 461
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 462 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 521
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||| ||||| |||||||||||||||||||||||| ||
Sbjct: 522 gcatccaagatcaggaagctcttcgacctttccaaggatgatgatgtacgcaagtatgtc 581
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 582 aacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaag 641
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| || ||||| || |||
Sbjct: 642 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaag 701
Query: 692 aagaagaggat 702
|||||||||||
Sbjct: 702 aagaagaggat 712
>gb|CF488870.1|CF488870 POL1_52_E12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_52_E12_A002 5', mRNA sequence
Length = 652
Score = 648 bits (327), Expect = 0.0
Identities = 540/611 (88%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 41 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 100
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 101 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 160
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 161 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 220
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| || ||| |||| |||||||| |||||||| || |||
Sbjct: 221 ggtttcccaatgaagcaaggagtgtttactcctggacgtgttcgccttctgcttcacagg 280
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 281 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 340
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 341 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 400
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 401 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 460
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 461 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 520
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| |||| ||||| |||||||| || |||
Sbjct: 521 aacacataccgcaggacattcacaaccaagagtggcagaaaggtgagcaaggcccccaag 580
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| || ||||| || |||
Sbjct: 581 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaag 640
Query: 692 aagaagaggat 702
|||||||||||
Sbjct: 641 aagaagaggat 651
>gb|CF489913.1|CF489913 POL1_61_H06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_H06_A002 3', mRNA sequence
Length = 646
Score = 646 bits (326), Expect = 0.0
Identities = 406/432 (93%), Gaps = 3/432 (0%)
Strand = Plus / Minus
Query: 5 gtccaaaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcc 61
||||||||||||||||||||||||||||| | || |||| |||||||||||||||||
Sbjct: 432 gtccaaaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcc 373
Query: 62 tcgctccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttcc 121
|||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 372 tcgcctccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgacc 313
Query: 122 accgggtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgac 181
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 accgggtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgac 253
Query: 182 cgaaggatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtc 241
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 252 cgaaggatctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtc 193
Query: 242 ttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgact 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 ttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgact 133
Query: 302 tctggtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcagg 361
|||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 132 tctggtcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggagg 73
Query: 362 cgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatct 421
|||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||
Sbjct: 72 cgtaatggtgagcgcaggaggaagtctgtccgtggttgtattgttagccaagacctttct 13
Query: 422 gttatcaacttg 433
||||||||||||
Sbjct: 12 gttatcaacttg 1
>gb|CF489832.1|CF489832 POL1_59_H03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_H03_A002 5', mRNA sequence
Length = 701
Score = 644 bits (325), Expect = 0.0
Identities = 526/593 (88%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 107 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 166
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 167 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 226
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 227 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 286
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 287 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 346
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 347 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 406
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 407 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 466
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 467 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 526
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 527 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 586
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 587 aacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaag 646
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgc 684
||||| || || ||||| || | |||||||||||||||||| || |||||
Sbjct: 647 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgc 699
>gb|CF482561.1|CF482561 POL1_7_E11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_E11_A002 5', mRNA sequence
Length = 714
Score = 638 bits (322), Expect = 0.0
Identities = 542/613 (88%), Gaps = 2/613 (0%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 89 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 148
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 149 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 208
Query: 212 gctct-gggtgaggagttcaagggttatgtcttcaaga-tcatgggtggatgtgacaagc 269
|| || |||||||| |||||||| |||||||| |||| |||||||||| ||||||||||
Sbjct: 209 gcacttnggtgaggaattcaagggctatgtctttaagaatcatgggtgggtgtgacaagc 268
Query: 270 aaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccata 329
|||| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |
Sbjct: 269 aaggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcaca 328
Query: 330 ggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctg 389
|||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 329 ggggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctg 388
Query: 390 tccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagg 449
|||| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 389 tccggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagg 448
Query: 450 gtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaaga 509
|||||||||| || || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 449 gtgagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaaga 508
Query: 510 gggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacg 569
| || ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |
Sbjct: 509 gagcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatg 568
Query: 570 tgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcaccta 629
| ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |
Sbjct: 569 tcaacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggccccca 628
Query: 630 agatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgaca 689
||||||| || || ||||| || | |||||||||||||||||| || ||||| || |
Sbjct: 629 agatccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagaga 688
Query: 690 agaagaagaggat 702
|||||||||||||
Sbjct: 689 agaagaagaggat 701
>gb|CN126336.1|CN126336 RHOH1_16_C02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_C02_A002 5', mRNA sequence
Length = 726
Score = 634 bits (320), Expect = e-180
Identities = 554/632 (87%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| |||||||||||| |||||||| || ||||||
Sbjct: 93 accatgaagttcaacatcgcgaacccgaccaccgggtgccggaagaagctcgagatcgat 152
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 153 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 212
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 213 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 272
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 273 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 332
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 333 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 392
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| |||| || |||||||| ||||| |||||||||
Sbjct: 393 cggggttgcattgtcagccaagacctgcctgtcattaacttggtcattgtcaagaagggt 452
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 453 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 512
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 513 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 572
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||| ||||||||| ||||||| ||||| |||| |||||||| || |||
Sbjct: 573 aacacataccgcatgacattcacaaccaagagtggcaaagaggtgagcaaggcccccaag 632
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| || ||||| || |||
Sbjct: 633 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaag 692
Query: 692 aagaagaggataactaagaagaagtctgaggc 723
||||||||||| | |||||| || |||||||
Sbjct: 693 aagaagaggattgcaaagaagcaggctgaggc 724
>gb|CF485850.1|CF485850 POL1_34_C04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_34_C04_A002 3', mRNA sequence
Length = 610
Score = 622 bits (314), Expect = e-176
Identities = 371/390 (95%)
Strand = Plus / Plus
Query: 424 tatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactga 483
|||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||
Sbjct: 1 tatcaacttggtgattgttaagaagggtgagaatgatcttcctggtttgactgacactga 60
Query: 484 gaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaa 543
|||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 61 gaagccaaggatgaggggtcccaagagggcctccaagatcaggaagctctttaacctttc 120
Query: 544 caaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaa 603
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 caaggatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaagag 180
Query: 604 cggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctcca 663
|||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 181 cggcaagaaggtgagcaaggcacctaagatccagcggcttgtgacccccttgaccctcca 240
Query: 664 gaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggc 723
||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 gaggaagcgcgctagaattgctgacaagaagaagaggatcgctaagaagaagtctgaggc 300
Query: 724 tgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagcga 783
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 301 tgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggatcgccgtagcga 360
Query: 784 gagcttggccaagaggaggtccaagctttc 813
||||||||||||||||||||||||||||||
Sbjct: 361 gagcttggccaagaggaggtccaagctttc 390
>gb|CN138806.1|CN138806 OX1_14_C04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_C04_A002 3', mRNA sequence
Length = 778
Score = 622 bits (314), Expect = e-176
Identities = 554/634 (87%)
Strand = Plus / Plus
Query: 218 ggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttc 277
|||||||| |||||||| |||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 8 ggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaaggtttc 67
Query: 278 ccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcact 337
||||||||||||||||| |||||| |||| |||||||| ||| |||| || |||||||||
Sbjct: 68 ccaatgaagcaaggagtgttgactcctggacgtgttcgccttttgcttcacaggggcact 127
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 128 ccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtccggggt 187
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||||||||
Sbjct: 188 tgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggtgagaat 247
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|| || || ||||||||||||||||||||||| ||||||||||| |||||||| || |||
Sbjct: 248 gaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagagagcatcc 307
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
|||||||| ||||| ||||||||| |||||||||||||||||||||||| || ||||||
Sbjct: 308 aagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtcaacaca 367
Query: 578 taccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaa 637
||||||||||||||||| ||||||| ||||| ||||| |||||||| || ||||||||
Sbjct: 368 taccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaagatccag 427
Query: 638 cggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaag 697
|| || ||||| || | |||||||||||||||||| || ||||| || |||||||||
Sbjct: 428 cgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaagaagaag 487
Query: 698 aggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctg 757
||||| | |||||| || ||||||| || |||||||||||||| || || ||||||||
Sbjct: 488 aggattgcaaagaagcaggctgaggccgcagagtaccagaagctgctggcacagaggctc 547
Query: 758 aaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttctgcc 817
||||| || ||||| ||| ||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 548 aaggagcaaagggaacgcaggagcgagagccttgccaagaggaggtggaagctttctgcc 607
Query: 818 gccgccaaggcttctgctgccacctctgcttaag 851
|| |||||||||| |||||||| ||||||||||
Sbjct: 608 gctgccaaggctttggctgccacatctgcttaag 641
>gb|CN130325.1|CN130325 RHOH1_40_F02.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_40_F02_A002 5', mRNA sequence
Length = 656
Score = 620 bits (313), Expect = e-176
Identities = 391/417 (93%)
Strand = Plus / Plus
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 240 gcttccgtggttatgggaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgta 299
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 300 ttgttagccaagaccgttctgttatcaacttggtgattgttaagaagggtgagaatgatc 359
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttcctggtttgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 419
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
|||| ||||| | |||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 420 tcaggaagctcgttaacctttccaaggatgatgatgtacgcaagtatgtgaacacatacc 479
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
||||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||
Sbjct: 480 gcaggacattcactaccaagagcggcaagaaggtgaggaaggcacctaagatccagcggc 539
Query: 642 ttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagagga 701
||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 540 ttgtgacctccttgaccctccagaggaagcgcgctagaattgctgacaagaagaagagga 599
Query: 702 taactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctga 758
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcgctaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctga 656
Score = 365 bits (184), Expect = 6e-099
Identities = 227/240 (94%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 40 cgccacccagcgc-tcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatga 98
|||| |||||||| ||||||||||||| || ||||| ||||||| |||||||||||||
Sbjct: 6 cgccccccagcgcgtcgagctcctcgcctccgtcgagctcgcgccggaacgccaccatga 65
Query: 99 agttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgacc 158
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 66 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctggaaatcgatgacgacc 125
Query: 159 agaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgg 218
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 126 agaagctgcgtgccttttatgaccgaaggatctcccaggaggtcagtggtgatgctctgg 185
Query: 219 gtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcc 278
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gcgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcc 245
>gb|CF487616.1|CF487616 POL1_44_H04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_44_H04_A002 5', mRNA sequence
Length = 624
Score = 617 bits (311), Expect = e-175
Identities = 461/511 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 105 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 164
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 165 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 224
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 225 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 284
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 285 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 344
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 345 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 404
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 405 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 464
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 465 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 524
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 525 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 584
Query: 572 aacacataccgcaggacattcactaccaaga 602
||||||||||||||||||||||| |||||||
Sbjct: 585 aacacataccgcaggacattcacaaccaaga 615
>gb|CN135253.1|CN135253 OX1_31_C08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_C08_A002 5', mRNA sequence
Length = 730
Score = 617 bits (311), Expect = e-175
Identities = 537/611 (87%), Gaps = 1/611 (0%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||
Sbjct: 112 accatgaagttcaacatcgcgaacccgaccaccgggtgccaggagaagctcgagatcgat 171
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 172 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 231
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 232 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 291
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||||| |||| |||| |||||||| |||||||| || |||
Sbjct: 292 ggtttcccaatgaagcaaggagttt-gactcctggacgtgttcgccttctgcttcacagg 350
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| | |||||||||||||
Sbjct: 351 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtacgaggaagtctgtc 410
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| ||||||||
Sbjct: 411 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggc 470
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 471 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 530
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| | |||||||||||||||||||||| ||
Sbjct: 531 gcatccaagatcaggaagctcttcaacctttccgaggatgatgatgtacgcaagtatgtc 590
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 591 aacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaag 650
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| | ||||| || |||
Sbjct: 651 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaagatcgcagagaag 710
Query: 692 aagaagaggat 702
|||||||||||
Sbjct: 711 aagaagaggat 721
>gb|CN130427.1|CN130427 RHOH1_41_A03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_A03_A002 5', mRNA sequence
Length = 648
Score = 613 bits (309), Expect = e-173
Identities = 486/545 (89%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 97 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 156
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 157 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 216
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 217 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 276
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| ||||||||||||| |||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 277 ggtttcccaatgaagcgaggagtgttgactcctggacgtgttcgccttctgcttcacagg 336
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| | |||||||||||||
Sbjct: 337 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaagaggaagtctgtc 396
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 397 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 456
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 457 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 516
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 517 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 576
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
|||||||||||||||| |||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 577 aacacataccgcaggagattcacaaccaagagtggcaaaaaggttagcaaggcccccaag 636
Query: 632 atcca 636
|||||
Sbjct: 637 atcca 641
>gb|BE359886.1|BE359886 DG1_58_D11.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 601 bits (303), Expect = e-170
Identities = 471/527 (89%)
Strand = Plus / Plus
Query: 110 gcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccagaagctgcgt 169
|||||||| ||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 9 gcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgatcagaagctgcgt 68
Query: 170 gccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtgaggagttc 229
| ||||| |||| |||||| ||||||||||||||||||||||| || |||||||| |||
Sbjct: 69 gtcttttttgacaaaaggatctcccaggaggtcagtggtgatgcacttggtgaggaattc 128
Query: 230 aagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaa 289
||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 129 aagggctatgtctttaagatcatgggtgggtgtgacaagcaaggtttcccaatgaagcaa 188
Query: 290 ggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccctgcttccgt 349
||||| |||||| |||| |||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 189 ggagtgttgactcctggacgtgttcgccttctgcttcacaggggcactccgtgcttccgt 248
Query: 350 ggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagc 409
|| ||||||||||| ||||||||||| ||||||||||||||||| |||||||| || |||
Sbjct: 249 gggtatggcaggcgcaatggtgagcgtaggaggaagtctgtccggggttgcattgtcagc 308
Query: 410 caagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggt 469
|||||||| ||||| || |||||||| ||||| ||||||||||||||||| || || |||
Sbjct: 309 caagacctgtctgtcattaacttggtcattgtcaagaagggtgagaatgaccttccaggt 368
Query: 470 ctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaag 529
|||||||||||||||||||| ||||||||||| |||||||| || ||||||||||| |||
Sbjct: 369 ctgactgacactgagaagcccaggatgagggggcccaagagagcatccaagatcaggaag 428
Query: 530 ctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggaca 589
|| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 429 ctcttcaacctttccaaggatgatgatgtacgcaagtatgtcaacacataccgcaggaca 488
Query: 590 ttcactaccaagaacggcaagaaggtcagcaaggcacctaagatcca 636
||||| ||||||| ||||| ||||| |||||||| || ||||||||
Sbjct: 489 ttcacaaccaagagtggcaaaaaggtgagcaaggcccccaagatcca 535
>gb|CN129807.1|CN129807 RHOH1_37_B09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_B09_A002 5', mRNA sequence
Length = 598
Score = 601 bits (303), Expect = e-170
Identities = 453/503 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
||||||| |||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 95 accatgaggttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 154
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 155 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 214
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 215 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 274
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 275 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 334
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 335 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 394
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 395 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 454
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 455 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 514
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 515 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 574
Query: 572 aacacataccgcaggacattcac 594
|||||||||||||||||||||||
Sbjct: 575 aacacataccgcaggacattcac 597
>gb|AW678747.1|AW678747 WS1_1_F12.b2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 595
Score = 599 bits (302), Expect = e-169
Identities = 449/498 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 98 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 157
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 158 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 217
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 218 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 277
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 278 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 337
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 338 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 397
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 398 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 457
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 458 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 517
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 518 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 577
Query: 572 aacacataccgcaggaca 589
||||||||||||||||||
Sbjct: 578 aacacataccgcaggaca 595
>gb|BG462803.1|BG462803 EM1_45_G07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 599 bits (302), Expect = e-169
Identities = 449/498 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 83 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 142
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 143 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 202
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 203 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 262
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 263 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 322
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 323 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 382
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 383 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 442
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 443 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 502
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 503 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 562
Query: 572 aacacataccgcaggaca 589
||||||||||||||||||
Sbjct: 563 aacacataccgcaggaca 580
>gb|BE125843.1|BE125843 DG1_58_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 501
Score = 581 bits (293), Expect = e-164
Identities = 443/493 (89%)
Strand = Plus / Plus
Query: 110 gcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccagaagctgcgt 169
|||||||| ||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 9 gcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgatcagaagctgcgt 68
Query: 170 gccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtgaggagttc 229
| ||||| |||| |||||| ||||||||||||||||||||||| || |||||||| |||
Sbjct: 69 gtcttttttgacaaaaggatctcccaggaggtcagtggtgatgcacttggtgaggaattc 128
Query: 230 aagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaagcaa 289
||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 129 aagggctatgtctttaagatcatgggtgggtgtgacaagcaaggtttcccaatgaagcaa 188
Query: 290 ggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccctgcttccgt 349
||||| |||||| |||| |||||||| |||||||| || ||||||||||| |||||||||
Sbjct: 189 ggagtgttgactcctggacgtgttcgccttctgcttcacaggggcactccgtgcttccgt 248
Query: 350 ggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagc 409
|| ||||||||||| ||||||||||| ||||||||||||||||| |||||||| || |||
Sbjct: 249 gggtatggcaggcgcaatggtgagcgtaggaggaagtctgtccggggttgcattgtcagc 308
Query: 410 caagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggt 469
|||||||| ||||| || |||||||| ||||| ||||||||||||||||| || || |||
Sbjct: 309 caagacctgtctgtcattaacttggtcattgtcaagaagggtgagaatgaccttccaggt 368
Query: 470 ctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaag 529
|||||||||||||||||||| ||||||||||| |||||||| || ||||||||||| |||
Sbjct: 369 ctgactgacactgagaagcccaggatgagggggcccaagagagcatccaagatcaggaag 428
Query: 530 ctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggaca 589
|| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 429 ctcttcaacctttccaaggatgatgatgtacgcaagtatgtcaacacataccgcaggaca 488
Query: 590 ttcactaccaaga 602
||||| |||||||
Sbjct: 489 ttcacaaccaaga 501
>gb|CN138871.1|CN138871 OX1_14_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_14_C04_A002 5', mRNA sequence
Length = 544
Score = 581 bits (293), Expect = e-164
Identities = 446/497 (89%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 48 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 107
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 108 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 167
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 168 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 227
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 228 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 287
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||| | |||||||||||||||
Sbjct: 288 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagtgtaggaggaagtctgtc 347
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| |||||||| | |||||| ||||| |||||||||
Sbjct: 348 cggggttgcattgtcagccaagacctgtctgttattatcttggtcattgtcaagaagggt 407
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 408 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 467
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 468 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 527
Query: 572 aacacataccgcaggac 588
||||||||| |||||||
Sbjct: 528 aacacatacggcaggac 544
>gb|BF585951.1|BF585951 FM1_25_E11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 576
Score = 577 bits (291), Expect = e-163
Identities = 444/495 (89%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 82 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 141
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 142 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 201
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 202 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 261
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| ||||| || |||||||| || |||
Sbjct: 262 ggtttcccaatgaagcaaggagtgttgactcctggacgtgtccgccttctgcttcacagg 321
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| | |||||||||||||
Sbjct: 322 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaagaggaagtctgtc 381
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 382 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 441
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 442 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 501
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 502 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 561
Query: 572 aacacataccgcagg 586
|||||||||||||||
Sbjct: 562 aacacataccgcagg 576
>gb|CD225507.1|CD225507 CCC1_3_A09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_3_A09_A007 5', mRNA sequence
Length = 584
Score = 571 bits (288), Expect = e-161
Identities = 429/476 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 107 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 166
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 167 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 226
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 227 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 286
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 287 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 346
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 347 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 406
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 407 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 466
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 467 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 526
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagta 567
|| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 527 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagta 582
>gb|CF483341.1|CF483341 POL1_21_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D01_A002 5', mRNA sequence
Length = 662
Score = 571 bits (288), Expect = e-161
Identities = 340/356 (95%), Gaps = 1/356 (0%)
Strand = Plus / Plus
Query: 134 aagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcc 193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 307 aagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatctcc 366
Query: 194 caggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatg 253
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 367 caggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaagatcatg 426
Query: 254 ggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgtt 313
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 427 ggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctggtcgtgtt 486
Query: 314 cgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgag 373
|| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 487 cgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaatggtgag 546
Query: 374 cgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttg 433
|||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||
Sbjct: 547 cgcaggaggaagtctgtccgtggttgtattgttagccaagacctttctgttatcaacttg 606
Query: 434 gtgattgtgaagaagggtgag-aatgatctgcctggtctgactgacactgagaagc 488
|||||||| ||||| |||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 607 gtgattgttaagaaaggtgagaaatgatcttcctggtttgactgacactgagaagc 662
>gb|CX608062.1|CX608062 ANR1_32_A01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_A01_A002 5', mRNA sequence
Length = 371
Score = 557 bits (281), Expect = e-157
Identities = 349/371 (94%), Gaps = 3/371 (0%)
Strand = Plus / Plus
Query: 10 aaaccctagccctcgcgccgccgc---ctccttcgccacccagcgctcgagctcctcgct 66
|||||||||||||||||||||||| | || |||| |||||||||||||||||||||
Sbjct: 1 aaaccctagccctcgcgccgccgcagccgccgccgccccccagcgctcgagctcctcgcc 60
Query: 67 ccctgcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgg 126
|| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tccatcgagctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgaccaccgg 120
Query: 127 gtgccaaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 186
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgccagaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaag 180
Query: 187 gatatcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaa 246
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 gatctcccaggaggtcagtggtgatgctctgggcgaggagttcaagggttatgtcttcaa 240
Query: 247 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctgg 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gatcatgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttctgacttctgg 300
Query: 307 tcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaa 366
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 301 tcgtgttcgccttctgctccacaggggtactccctgcttccgtggttatgggaggcgtaa 360
Query: 367 tggtgagcgca 377
|||||||||||
Sbjct: 361 tggtgagcgca 371
>gb|BG050948.1|BG050948 FM1_54_C10.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 566
Score = 543 bits (274), Expect = e-152
Identities = 434/486 (89%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
||||||||||| |||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 82 accatgaagtt-aacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 140
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 141 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 200
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 201 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 260
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| ||||| || |||||||| || |||
Sbjct: 261 ggtttcccaatgaagcaaggagtgttgactcctggacgtgtccgccttctgcttcacagg 320
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| || |||||||| |||||||||||||||
Sbjct: 321 ggcactccgtgcttccgtgggtatggcaggcgcaacggtgagcgtaggaggaagtctgtc 380
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 381 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 440
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 441 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagaga 500
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 501 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 560
Query: 572 aacaca 577
||||||
Sbjct: 561 aacaca 566
>gb|CF486988.1|CF486988 POL1_41_C05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_41_C05_A002 3', mRNA sequence
Length = 556
Score = 523 bits (264), Expect = e-146
Identities = 315/332 (94%)
Strand = Plus / Plus
Query: 482 gagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaacctt 541
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 1 gagaagccaaggatgaggggtcccaagagggcctccaagatcaggaagctctttaacctt 60
Query: 542 aacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaag 601
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tccaaggatgatgatgtacgcaagtatgtgaacacataccgcaggacattcactaccaag 120
Query: 602 aacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctc 661
| |||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 121 agcggcaagaaggtgagcaaggcacttaagatccagcggcttgtgacccccttgaccctc 180
Query: 662 cagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgag 721
||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 181 cagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaagaagaagtctgag 240
Query: 722 gctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccggagc 781
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 241 gctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggatcgccgtagc 300
Query: 782 gagagcttggccaagaggaggtccaagctttc 813
||||||||||||||||||||||||||||||||
Sbjct: 301 gagagcttggccaagaggaggtccaagctttc 332
>gb|BE917845.1|BE917845 OV1_7_G12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 347
Score = 521 bits (263), Expect = e-146
Identities = 320/339 (94%)
Strand = Plus / Plus
Query: 475 tgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgtt 534
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1 tgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcaggaagctctt 60
Query: 535 caaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcac 594
|||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 61 taacctttccaaggatgatgatgtacgcaagtatgtgaacacataccgcagggcattcac 120
Query: 595 taccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacaccctt 654
|||||||| |||||||||||| |||||||||| ||||||||| ||||||||| | |||||
Sbjct: 121 taccaagagcggcaagaaggtgagcaaggcacttaagatccagcggcttgtggccccctt 180
Query: 655 gaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaa 714
|||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct: 181 gaccctccagaggaagcgcgctagaattgctgacaagaagaagaggatcgctaagaagaa 240
Query: 715 gtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 gtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggatcg 300
Query: 775 ccggagcgagagcttggccaagaggaggtccaagctttc 813
||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgtagcgagagcttggccaagaggaggtccaagctttc 339
>gb|AW678668.1|AW678668 WS1_1_F12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 505 bits (255), Expect = e-141
Identities = 378/419 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 98 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 157
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 158 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 217
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 218 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 277
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 278 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 337
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 338 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 397
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 398 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 457
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 458 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagag 516
>gb|BE595258.1|BE595258 PI1_48_A01.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 512
Score = 505 bits (255), Expect = e-141
Identities = 378/419 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 92 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 151
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 152 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 211
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 212 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 271
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 272 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 331
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 332 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 391
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 392 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 451
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 452 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagag 510
>gb|BE598772.1|BE598772 PI1_82_E07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 519
Score = 505 bits (255), Expect = e-141
Identities = 378/419 (90%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 99 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 158
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 159 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 218
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 219 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 278
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| |||||||| |||||||| || |||
Sbjct: 279 ggtttcccaatgaagcaaggagtgttgactcctggacgtgttcgccttctgcttcacagg 338
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 339 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 398
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 399 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 458
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 459 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagag 517
>gb|BF421958.1|BF421958 FM1_9_G02.b2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 506
Score = 498 bits (251), Expect = e-139
Identities = 377/419 (89%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
|||||||||||||||||||||||||| ||||||||||||| |||||||| || ||||||
Sbjct: 82 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 141
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||| ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 142 gacgatcagaagctgcgtgtcttttttgacaaaaggatctcccaggaggtcagtggtgat 201
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|| || |||||||| |||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 202 gcacttggtgaggaattcaagggctatgtctttaagatcatgggtgggtgtgacaagcaa 261
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|| |||||||||||||||||||| |||||| |||| ||||| || |||||||| || |||
Sbjct: 262 ggtttcccaatgaagcaaggagtgttgactcctggacgtgtccgccttctgcttcacagg 321
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 322 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 381
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 382 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 441
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
|||||||| || || ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 442 gagaatgaccttccaggtctgactgacactgagaagcccaggatgagggggcccaagag 500
>gb|BF585872.1|BF585872 FM1_25_E11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 633
Score = 484 bits (244), Expect = e-135
Identities = 451/520 (86%)
Strand = Plus / Plus
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
|||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 1 ggcactccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtc 60
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
|| |||||||| || ||||||||||| ||||| || |||||||| ||||| |||||||||
Sbjct: 61 cggggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggt 120
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||| || || |||||||||||| |||||||||| ||||||||||| ||||||||
Sbjct: 121 gagaatgaccttccaggtctgactgactctgagaagcccaggatgagggggcccaagaga 180
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| ||
Sbjct: 181 gcatccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtc 240
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||||||||| ||||||| ||||| ||||| |||||||| || |||
Sbjct: 241 aacacataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaag 300
Query: 632 atccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaag 691
||||| || || ||||| || | |||||||||||||||||| || ||||| || |||
Sbjct: 301 atccagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaag 360
Query: 692 aagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccag 751
||||||||||| | |||||| || ||||||| || |||||||||||||| || || |||
Sbjct: 361 aagaagaggatcgcaaagaagcaggctgaggccgcagagtaccagaagctgctggcacag 420
Query: 752 aggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctt 811
||||| ||||| || ||||| ||| ||||||||||| | |||||||||||||| |||||
Sbjct: 421 aggctcaaggagcaaagggaacgcaggagcgagagccttgccaagaggaggtcgaagctc 480
Query: 812 tctgccgccgccaaggcttctgctgccacctctgcttaag 851
|||||||| ||||||||||| |||||||| ||||| ||||
Sbjct: 481 tctgccgctgccaaggcttcggctgccacatctgcctaag 520
>gb|BE359922.1|BE359922 DG1_58_D11.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 624
Score = 478 bits (241), Expect = e-133
Identities = 448/517 (86%)
Strand = Plus / Plus
Query: 335 actccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgt 394
||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1 actccgtgcttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtccgg 60
Query: 395 ggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgag 454
|||||||| || ||||||||||| ||||| || |||||||| ||||| ||||||||||||
Sbjct: 61 ggttgcattgtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggtgag 120
Query: 455 aatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcc 514
||||| || || |||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 121 aatgaccttccaggtctgactgacactgagaagctcaggatgagggggcccaagagagca 180
Query: 515 tccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaac 574
||||||||||| ||||| ||||||||| |||||||||||||||||||||||| || |||
Sbjct: 181 tccaagatcaggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtcaac 240
Query: 575 acataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatc 634
|||||||||||||||||||| ||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 241 acataccgcaggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaagatc 300
Query: 635 caacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaag 694
|| || || ||||| || | |||||||||||||||||| || ||||| || ||||||
Sbjct: 301 cagcgcctggtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaagaag 360
Query: 695 aagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagagg 754
|||||||| | |||||| || ||||||| || |||||||||||||| || || ||||||
Sbjct: 361 aagaggattgcaaagaagcaggctgaggccgcagagtaccagaagctgctggcacagagg 420
Query: 755 ctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttct 814
|| ||||| || ||||| ||| ||||||||||| | |||||||||||||| ||||| |||
Sbjct: 421 ctcaaggagcaaagggaacgcaggagcgagagccttgccaagaggaggtcgaagctctct 480
Query: 815 gccgccgccaaggcttctgctgccacctctgcttaag 851
||||| ||||||||||| |||||||| ||||| ||||
Sbjct: 481 gccgctgccaaggcttcggctgccacatctgcctaag 517
>gb|BG051267.1|BG051267 FM1_54_C10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 638
Score = 476 bits (240), Expect = e-132
Identities = 441/508 (86%)
Strand = Plus / Plus
Query: 344 ttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatc 403
|||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1 ttccgtgggtatggcaggcgcaatggtgagcgtaggaggaagtctgtccggggttgcatt 60
Query: 404 gtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctg 463
|| ||||||||||| ||||| || |||||||| ||||| ||||||||||||||||| ||
Sbjct: 61 gtcagccaagacctgtctgtcattaacttggtcattgtcaagaagggtgagaatgacctt 120
Query: 464 cctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatc 523
|| ||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||
Sbjct: 121 ccaggtctgactgacactgagaagcccaggatgagggggcccaagagagcatccaagatc 180
Query: 524 agaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgc 583
|| ||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct: 181 aggaagctcttcaacctttccaaggatgatgatgtacgcaagtatgtcaacacataccgc 240
Query: 584 aggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggctt 643
||||||||||| ||||||| ||||| ||||| |||||||| || |||||||| || ||
Sbjct: 241 aggacattcacaaccaagagtggcaaaaaggtgagcaaggcccccaagatccagcgcctg 300
Query: 644 gtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggata 703
||||| || | |||||||||||||||||| || ||||| || ||||||||||||||
Sbjct: 301 gtgaccccacaggtcctccagaggaagcgtgccaggatcgcagagaagaagaagaggatc 360
Query: 704 actaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaa 763
| |||||| || ||||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 361 gcaaagaagcaggctgaggccgcagagtaccagaagctgctggcacagaggctcaaggag 420
Query: 764 cagagggaccgccggagcgagagcttggccaagaggaggtccaagctttctgccgccgcc 823
|| ||||| ||| ||||||||||| | |||||||||||||| ||||| |||||||| |||
Sbjct: 421 caaagggaacgcaggagcgagagccttgccaagaggaggtcgaagctctctgccgctgcc 480
Query: 824 aaggcttctgctgccacctctgcttaag 851
|||||||| |||||||| ||||| ||||
Sbjct: 481 aaggcttcggctgccacatctgcctaag 508
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 328,154
Number of Sequences: 832831
Number of extensions: 328154
Number of successful extensions: 94305
Number of sequences better than 0.5: 128
Number of HSP's better than 0.5 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94031
Number of HSP's gapped (non-prelim): 206
length of query: 1101
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1081
effective length of database: 474,703,049
effective search space: 513153995969
effective search space used: 513153995969
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)