BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD210818.1|CD210818 HS1_66_C12.b1_A012 Heat-shocked seed... 613 e-173
gb|BE356258.1|BE356258 DG1_123_C11.g1_A002 Dark Grown 1 (DG... 605 e-171
gb|CD210040.1|CD210040 HS1_56_F11.g1_A012 Heat-shocked seed... 605 e-171
gb|CD210547.1|CD210547 HS1_48_D07.b1_A012 Heat-shocked seed... 605 e-171
gb|CD231560.1|CD231560 SS1_22_F12.b1_A012 Salt-stressed see... 605 e-171
gb|CF485067.1|CF485067 POL1_29_F04.b1_A002 Pollen Sorghum b... 605 e-171
gb|CF487514.1|CF487514 POL1_44_F09.b1_A002 Pollen Sorghum b... 605 e-171
gb|CN124045.1|CN124045 RHOH1_2_G02.b1_A002 Acid- and alkali... 605 e-171
gb|CN139301.1|CN139301 OX1_21_F05.b1_A002 Oxidatively-stres... 605 e-171
gb|CN145882.1|CN145882 WOUND1_36_A05.b1_A002 Wounded leaves... 605 e-171
gb|CN127327.1|CN127327 RHOH1_22_H01.b1_A002 Acid- and alkal... 603 e-171
gb|CN151877.1|CN151877 WOUND1_78_G01.b1_A002 Wounded leaves... 603 e-171
gb|CF489871.1|CF489871 POL1_61_D02.b1_A002 Pollen Sorghum b... 599 e-169
gb|CF488175.1|CF488175 POL1_48_F01.b1_A002 Pollen Sorghum b... 597 e-169
gb|CF488612.1|CF488612 POL1_51_C07.b1_A002 Pollen Sorghum b... 597 e-169
gb|CD228492.1|CD228492 CCC1_8_G08.b1_A007 Callus culture/ce... 593 e-168
gb|CF486855.1|CF486855 POL1_40_E06.b1_A002 Pollen Sorghum b... 591 e-167
gb|CF484773.1|CF484773 POL1_27_H11.b1_A002 Pollen Sorghum b... 589 e-166
gb|CN126958.1|CN126958 RHOH1_20_D08.b1_A002 Acid- and alkal... 589 e-166
gb|CN128398.1|CN128398 RHOH1_29_F09.b1_A002 Acid- and alkal... 579 e-163
gb|CD221953.1|CD221953 CCC1_1_H12.b1_A007 Callus culture/ce... 573 e-162
gb|CF482279.1|CF482279 POL1_6_B02.b1_A002 Pollen Sorghum bi... 573 e-162
gb|BE918628.1|BE918628 OV1_4_C03.b1_A002 Ovary 1 (OV1) Sorg... 515 e-144
gb|CD206528.1|CD206528 HS1_23_C06.b1_A012 Heat-shocked seed... 509 e-142
gb|BG052268.1|BG052268 RHIZ2_12_D08.g1_A003 Rhizome2 (RHIZ2... 507 e-142
gb|BG052255.1|BG052255 RHIZ2_12_B08.g1_A003 Rhizome2 (RHIZ2... 505 e-141
gb|BM326824.1|BM326824 PIC1_3_E02.g1_A002 Pathogen-infected... 505 e-141
gb|BE364084.1|BE364084 PI1_11_H08.g1_A002 Pathogen induced ... 492 e-137
gb|BG946976.1|BG946976 IP1_2_A06.g1_A002 Immature pannicle ... 440 e-122
gb|BG103746.1|BG103746 RHIZ2_40_C11.g1_A003 Rhizome2 (RHIZ2... 430 e-119
gb|BG558125.1|BG558125 RHIZ2_67_B08.g1_A003 Rhizome2 (RHIZ2... 430 e-119
gb|CN127412.1|CN127412 RHOH1_22_H01.g3_A002 Acid- and alkal... 420 e-116
gb|CF770838.1|CF770838 DSBF1_10_D03.g1_A010 Drought-stresse... 412 e-113
gb|BM328687.1|BM328687 PIC1_25_D04.g1_A002 Pathogen-infecte... 400 e-110
gb|BF587612.1|BF587612 FM1_38_F02.g1_A003 Floral-Induced Me... 396 e-108
gb|CF482442.1|CF482442 POL1_7_A09.b1_A002 Pollen Sorghum bi... 375 e-102
gb|CF488370.1|CF488370 POL1_49_B07.g1_A002 Pollen Sorghum b... 365 4e-099
gb|CD206176.1|CD206176 HS1_21_A03.b1_A012 Heat-shocked seed... 363 1e-098
gb|CD205909.1|CD205909 HS1_19_F09.b1_A012 Heat-shocked seed... 333 1e-089
gb|CF770425.1|CF770425 DSBF1_7_E04.g1_A010 Drought-stressed... 333 1e-089
gb|CD231796.1|CD231796 SS1_23_D05.g1_A012 Salt-stressed see... 317 8e-085
gb|CX618037.1|CX618037 GABR1_37_H01.b1_A002 GA- or brassino... 303 1e-080
gb|BI245678.1|BI245678 IP1_68_G07.g1_A002 Immature pannicle... 293 1e-077
gb|BE918471.1|BE918471 OV1_4_C03.g1_A002 Ovary 1 (OV1) Sorg... 266 3e-069
gb|BG273344.1|BG273344 OV2_27_C02.g1_A002 Ovary 2 (OV2) Sor... 260 2e-067
gb|BG102552.1|BG102552 RHIZ2_34_E01.g1_A003 Rhizome2 (RHIZ2... 254 1e-065
gb|CF489846.1|CF489846 POL1_61_A08.b1_A002 Pollen Sorghum b... 224 9e-057
gb|CF489926.1|CF489926 POL1_61_A08.g1_A002 Pollen Sorghum b... 224 9e-057
gb|CD231552.1|CD231552 SS1_22_E10.b1_A012 Salt-stressed see... 216 2e-054
gb|CF483082.1|CF483082 POL1_11_D12.b1_A002 Pollen Sorghum b... 208 5e-052
gb|CF426998.1|CF426998 PH1_3_A01.b1_A002 Phosphorous-defici... 184 8e-045
gb|BG739664.1|BG739664 EM1_73_F03.b1_A002 Embryo 1 (EM1) So... 161 1e-037
gb|BF317785.1|BF317785 OV1_9_D09.g1_A002 Ovary 1 (OV1) Sorg... 143 3e-032
gb|BI075028.1|BI075028 IP1_20_H01.g1_A002 Immature pannicle... 137 2e-030
gb|CF488971.1|CF488971 POL1_53_G06.b1_A002 Pollen Sorghum b... 127 2e-027
gb|CD210723.1|CD210723 HS1_49_D06.b1_A012 Heat-shocked seed... 121 9e-026
gb|BE918124.1|BE918124 OV1_2_C03.b1_A002 Ovary 1 (OV1) Sorg... 117 1e-024
gb|CF487199.1|CF487199 POL1_42_H03.b1_A002 Pollen Sorghum b... 105 6e-021
gb|BZ369697.1|BZ369697 id10a07.g1 WGS-SbicolorF (DH5a methy... 88 1e-015
gb|CW363797.1|CW363797 fsbb001f035j01k0 Sorghum methylation... 88 1e-015
gb|CW258188.1|CW258188 104_724_11227742_148_35167_063 Sorgh... 78 1e-012
gb|CW310642.1|CW310642 104_799_11469820_116_35746_002 Sorgh... 78 1e-012
gb|CW784366.1|CW784366 SP__Bb0006N14.f SP__Bb Sorghum propi... 70 3e-010
gb|CF488779.1|CF488779 POL1_52_D07.b1_A002 Pollen Sorghum b... 68 1e-009
gb|CW048785.1|CW048785 104_287_10513629_115_30213 Sorghum m... 66 5e-009
gb|BG946984.1|BG946984 IP1_2_B06.g1_A002 Immature pannicle ... 60 3e-007
gb|CW258187.1|CW258187 104_724_11227742_116_35163_063 Sorgh... 56 5e-006
gb|CL700559.2|CL700559 SP__Ba0062L04.f SP__Ba Sorghum propi... 54 2e-005
gb|BI098750.1|BI098750 IP1_36_F01.g1_A002 Immature pannicle... 54 2e-005
gb|CW188014.1|CW188014 104_607_11172792_116_36724_086 Sorgh... 48 0.001
gb|CW310643.1|CW310643 104_799_11469820_148_35750_002 Sorgh... 46 0.004
gb|CW301944.1|CW301944 104_785_11464464_148_36268_082 Sorgh... 42 0.070
gb|CW363796.1|CW363796 fsbb001f035j01f0 Sorghum methylation... 42 0.070
gb|CD206038.1|CD206038 HS1_20_E03.b1_A012 Heat-shocked seed... 42 0.070
gb|BZ412841.1|BZ412841 111e10_12 Subclones from BAC clones ... 40 0.28
gb|BZ412929.1|BZ412929 232a8_13 Subclones from BAC clones m... 40 0.28
gb|CW133512.1|CW133512 104_517_11116803_116_34808_010 Sorgh... 40 0.28
gb|CW440026.1|CW440026 fsbb001f158h12k0 Sorghum methylation... 40 0.28
gb|AW923180.1|AW923180 DG1_50_B03.b1_A002 Dark Grown 1 (DG1... 40 0.28
gb|BE355351.1|BE355351 DG1_114_F05.b1_A002 Dark Grown 1 (DG... 40 0.28
gb|BE355429.1|BE355429 DG1_114_F05.b2_A002 Dark Grown 1 (DG... 40 0.28
gb|BG355444.1|BG355444 EM1_16_E09.b1_A002 Embryo 1 (EM1) So... 40 0.28
gb|BG558216.1|BG558216 RHIZ2_64_E07.b1_A003 Rhizome2 (RHIZ2... 40 0.28
gb|BI212067.1|BI212067 IP1_61_C01.g1_A002 Immature pannicle... 40 0.28
gb|BM322948.1|BM322948 PIC1_15_E04.b1_A002 Pathogen-infecte... 40 0.28
gb|CD235683.1|CD235683 SS1_37_D06.b1_A012 Salt-stressed see... 40 0.28
gb|CF430252.1|CF430252 PH1_27_B11.b1_A002 Phosphorous-defic... 40 0.28
gb|CF489046.1|CF489046 POL1_54_B11.b1_A002 Pollen Sorghum b... 40 0.28
>gb|CD210818.1|CD210818 HS1_66_C12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_66_C12_A012 3', mRNA sequence
Length = 716
Score = 613 bits (309), Expect = e-173
Identities = 439/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 81 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 140
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 141 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 200
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 201 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 260
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 261 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 320
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 380
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 381 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 440
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 441 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 500
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 501 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 560
Query: 475 t 475
|
Sbjct: 561 t 561
>gb|BE356258.1|BE356258 DG1_123_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 63
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 64 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 123
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 124 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 183
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 184 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 243
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 244 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 303
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 304 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 363
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 364 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 423
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 424 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 483
Query: 475 t 475
|
Sbjct: 484 t 484
>gb|CD210040.1|CD210040 HS1_56_F11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_F11_A012 5', mRNA sequence
Length = 783
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 711 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 652
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 651 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 592
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 591 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 532
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||| ||
Sbjct: 531 gcgttggccaagactttcgcagaggagacctggggcaagcacgaggaggcagagaaggct 472
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 471 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 412
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 411 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 352
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 351 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 292
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 291 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 232
Query: 475 t 475
|
Sbjct: 231 t 231
>gb|CD210547.1|CD210547 HS1_48_D07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_48_D07_A012 3', mRNA sequence
Length = 684
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 53 caaaagaaaatcaagaccccgaactaccagggtaaatggaaggcacctatgattgacaat 112
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 113 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 172
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 173 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 232
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 233 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 292
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 293 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 352
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 353 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 412
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 413 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 472
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 473 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 532
Query: 475 t 475
|
Sbjct: 533 t 533
>gb|CD231560.1|CD231560 SS1_22_F12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_F12_A012 3', mRNA sequence
Length = 664
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 32 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 91
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 92 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 151
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 152 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 211
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 212 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 271
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 272 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 331
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| | |||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 332 gaggatgacgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 391
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 392 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 451
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 452 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 511
Query: 475 t 475
|
Sbjct: 512 t 512
>gb|CF485067.1|CF485067 POL1_29_F04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_29_F04_A002 3', mRNA sequence
Length = 654
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 25 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 84
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 85 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 144
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 145 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 204
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 205 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 264
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 324
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 325 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 384
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 385 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 444
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 445 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 504
Query: 475 t 475
|
Sbjct: 505 t 505
>gb|CF487514.1|CF487514 POL1_44_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_44_F09_A002 3', mRNA sequence
Length = 638
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 68
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 69 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 128
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 129 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 188
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 189 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 248
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 249 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 308
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 309 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 368
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 369 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 428
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 429 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 488
Query: 475 t 475
|
Sbjct: 489 t 489
>gb|CN124045.1|CN124045 RHOH1_2_G02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_G02_A002 3', mRNA sequence
Length = 660
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 32 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 91
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 92 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 151
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 152 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 211
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 212 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 271
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 272 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 331
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 332 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 391
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 392 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 451
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 452 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 511
Query: 475 t 475
|
Sbjct: 512 t 512
>gb|CN139301.1|CN139301 OX1_21_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_21_F05_A002 3', mRNA sequence
Length = 813
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 126 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 185
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 186 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 245
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 246 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 305
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 306 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 365
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 366 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 425
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 426 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 485
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 486 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 545
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 546 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 605
Query: 475 t 475
|
Sbjct: 606 t 606
>gb|CN145882.1|CN145882 WOUND1_36_A05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_A05_A002 3', mRNA sequence
Length = 801
Score = 605 bits (305), Expect = e-171
Identities = 438/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 177 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 236
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 237 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 296
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 297 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 356
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 357 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 416
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 476
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 477 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 536
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 537 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 596
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 597 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 656
Query: 475 t 475
|
Sbjct: 657 t 657
>gb|CN127327.1|CN127327 RHOH1_22_H01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H01_A002 3', mRNA sequence
Length = 832
Score = 603 bits (304), Expect = e-171
Identities = 439/481 (91%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 145 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 204
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 205 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 264
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 265 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 324
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 325 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 384
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 444
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 445 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 504
Query: 366 tctgatgccgaggatgacaagga---ctctgagga------gcacgacgagctctagatg 416
||||||||||||||| |||||| |||||| || |||||||||||||||||||
Sbjct: 505 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 564
Query: 417 atgagtatgat-aga-ggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 565 gtgaggatgatgatattgtggccaccgaacttggagccgctggcctggatttatcaactc 624
Query: 475 t 475
|
Sbjct: 625 t 625
>gb|CN151877.1|CN151877 WOUND1_78_G01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_78_G01_A002 3', mRNA sequence
Length = 766
Score = 603 bits (304), Expect = e-171
Identities = 364/384 (94%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 78 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 137
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 138 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 197
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 198 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 257
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 258 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 317
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 377
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 378 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 437
Query: 366 tctgatgccgaggatgacaaggac 389
||||||||||||||| |||||||
Sbjct: 438 tctgatgccgaggatagcaaggac 461
>gb|CF489871.1|CF489871 POL1_61_D02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_D02_A002 3', mRNA sequence
Length = 663
Score = 599 bits (302), Expect = e-169
Identities = 439/482 (91%), Gaps = 12/482 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactacc-agggtaaatggaaggcacctatgattgacaa 64
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 17 caaaagaaaatcaagaacccgaactacccagggtaaatggaaggcacctatgattgacaa 76
Query: 65 cccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcat 124
|||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 77 tccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcat 136
Query: 125 tgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcc 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 137 tgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccc 196
Query: 185 tgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagac 244
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 197 tgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggc 256
Query: 245 tgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatga 304
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 257 tgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatga 316
Query: 305 tgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccga 364
||| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||
Sbjct: 317 tgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctga 376
Query: 365 ctctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagat 415
|||||||||||||||| |||| |||||| ||| |||||||||||||||||||
Sbjct: 377 ctctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagat 436
Query: 416 gatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagct 473
| |||| ||||| | |||||||| || |||| |||| |||||||||||||||||||
Sbjct: 437 ggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagct 496
Query: 474 ct 475
||
Sbjct: 497 ct 498
>gb|CF488175.1|CF488175 POL1_48_F01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_48_F01_A002 3', mRNA sequence
Length = 664
Score = 597 bits (301), Expect = e-169
Identities = 437/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 32 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 91
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 92 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 151
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 152 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 211
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 212 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 271
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 272 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 331
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| | |||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 332 gaggatgacgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 391
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 392 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 451
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 452 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 511
Query: 475 t 475
|
Sbjct: 512 t 512
>gb|CF488612.1|CF488612 POL1_51_C07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_C07_A002 3', mRNA sequence
Length = 684
Score = 597 bits (301), Expect = e-169
Identities = 437/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 29 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 88
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 89 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 148
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 149 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 208
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 209 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 268
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 269 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 328
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| | |||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 329 gaggatgacgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 388
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 389 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 448
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 449 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 508
Query: 475 t 475
|
Sbjct: 509 t 509
>gb|CD228492.1|CD228492 CCC1_8_G08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_G08_A007 3', mRNA sequence
Length = 649
Score = 593 bits (299), Expect = e-168
Identities = 429/471 (91%), Gaps = 11/471 (2%)
Strand = Plus / Plus
Query: 16 tcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaacccagatttca 75
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaatccagatttca 60
Query: 76 aggatgatccgtacatttatgcatttgacagcctgaaatacattggcattgagctgtggc 135
|||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 aggatgatccatacatctatgcatttgacagcctgaagtacattggcattgagctgtggc 120
Query: 136 aggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgttggcca 195
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 121 aggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccctgcgttggcca 180
Query: 196 agacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgctttcgatg 255
||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 agactttcgcagaggagacctggggcaagcacaaggaggcagagaaggctgctttcgatg 240
Query: 256 aggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacgatgatg 315
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 241 cggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgatgaggatgacg 300
Query: 316 acctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactctgatgccg 375
||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 301 acctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactctgatgccg 360
Query: 376 aggatgacaag---gactct------gaggagcacgacgagctctagatgatgagtatga 426
||||| |||| |||||| ||| |||||||||||||||||||| |||| ||||
Sbjct: 361 aggatagcaaggacgactctgatgatgagaagcacgacgagctctagatggtgaggatga 420
Query: 427 t--agaggtggccactgacattggtgccgttggcctggatttatcagctct 475
| | |||||||| || |||| |||| |||||||||||||||||||||
Sbjct: 421 tgatgttgtggccaccgaacttggagccgctggcctggatttatcagctct 471
>gb|CF486855.1|CF486855 POL1_40_E06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_40_E06_A002 3', mRNA sequence
Length = 705
Score = 591 bits (298), Expect = e-167
Identities = 438/482 (90%), Gaps = 12/482 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactacc-agggtaaatggaaggcacctatgattgacaa 64
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 82 caaaagaaaatcaagaacccgaactacccagggtaaatggaaggcacctatgattgacaa 141
Query: 65 cccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcat 124
|||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 142 tccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcat 201
Query: 125 tgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcc 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 202 tgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccc 261
Query: 185 tgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagac 244
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 262 tgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggc 321
Query: 245 tgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatga 304
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 tgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatga 381
Query: 305 tgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccga 364
||| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||
Sbjct: 382 tgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctga 441
Query: 365 ctctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagat 415
|||||||||||||||| |||| |||||| ||| |||||||||||||||||||
Sbjct: 442 ctctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagat 501
Query: 416 gatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagct 473
| |||| ||||| | |||||||| || |||| |||| |||||||||||||||| ||
Sbjct: 502 ggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaact 561
Query: 474 ct 475
||
Sbjct: 562 ct 563
>gb|CF484773.1|CF484773 POL1_27_H11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_27_H11_A002 3', mRNA sequence
Length = 696
Score = 589 bits (297), Expect = e-166
Identities = 436/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 63
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 64 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 123
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||
Sbjct: 124 gagctgtggcaggttaaatcaggcactttgtttgacagcttcatcatcactgatgaccct 183
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 184 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 243
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 244 gctttcgatgcggctgagaaaaagaaggaagaagaggaagcccccaagggtggtgatgat 303
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 304 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 363
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 364 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 423
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 424 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 483
Query: 475 t 475
|
Sbjct: 484 t 484
>gb|CN126958.1|CN126958 RHOH1_20_D08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_20_D08_A002 3', mRNA sequence
Length = 760
Score = 589 bits (297), Expect = e-166
Identities = 436/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||
Sbjct: 72 caaaagaaaatcaagaacccgaacttccagggtaaatggaaggcacctttgattgacaat 131
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 132 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 191
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 192 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 251
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 252 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 311
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 312 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 371
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 372 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 431
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 432 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 491
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 492 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 551
Query: 475 t 475
|
Sbjct: 552 t 552
>gb|CN128398.1|CN128398 RHOH1_29_F09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_29_F09_A002 3', mRNA sequence
Length = 759
Score = 579 bits (292), Expect = e-163
Identities = 361/384 (94%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 133 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 192
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 193 ccagatttcaaggatgatccttacatctatgcatttgacagcctgaagtacattggcatt 252
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 253 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 312
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 313 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 372
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 373 gctttcgatgcggctgagaaaaagaaggaagaagaggaacccgccaagggtggtgatgat 432
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| | |||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 433 gaggatgacgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 492
Query: 366 tctgatgccgaggatgacaaggac 389
|||||| |||||||| |||||||
Sbjct: 493 tctgataccgaggatagcaaggac 516
>gb|CD221953.1|CD221953 CCC1_1_H12.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_H12_A007 3', mRNA sequence
Length = 639
Score = 573 bits (289), Expect = e-162
Identities = 434/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 16 caaaagaaaatcaagaacccgaacttccagggtaaatggaaggcacctatgattgacaat 75
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 76 ccagatttcaaggatgatccatacacctatgcatttgacagcctgaagtacattggcatt 135
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct: 136 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcagtgatgaccct 195
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 196 gcgttggccaagactttcgcagaggagacccggggcaagcacaaggaggcagagaaggct 255
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 256 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 315
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||| ||| |||||||| |||
Sbjct: 316 gaggatgacgacctagaggatgaggaagacgatgagaaggcagccgaggacaaggctgac 375
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 376 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 435
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 436 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 495
Query: 475 t 475
|
Sbjct: 496 t 496
>gb|CF482279.1|CF482279 POL1_6_B02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_6_B02_A002 3', mRNA sequence
Length = 653
Score = 573 bits (289), Expect = e-162
Identities = 434/481 (90%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 30 caaaagaaaatcaagaccccgaactaccagggtaaatggaaggcacctatggttgacaat 89
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 90 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 149
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 150 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 209
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 210 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 269
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 270 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 329
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| | ||||| |||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 330 gaggatgacgccctaggggatgaggaagacgatgagaaggcagacgaggacaaggctgac 389
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 390 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 449
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| |||||||||||||||| |||
Sbjct: 450 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactc 509
Query: 475 t 475
|
Sbjct: 510 t 510
>gb|BE918628.1|BE918628 OV1_4_C03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 495
Score = 515 bits (260), Expect = e-144
Identities = 301/315 (95%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 179 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 238
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 239 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 298
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 299 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 358
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 359 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 418
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 419 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 478
Query: 306 gacgatgatgaccta 320
|| ||||| ||||||
Sbjct: 479 gangatgacgaccta 493
>gb|CD206528.1|CD206528 HS1_23_C06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_23_C06_A012 3', mRNA sequence
Length = 576
Score = 509 bits (257), Expect = e-142
Identities = 381/421 (90%), Gaps = 11/421 (2%)
Strand = Plus / Plus
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 4 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 63
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 64 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 123
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 124 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 183
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgat 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 184 gctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgat 243
Query: 306 gacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgac 365
|| ||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| |||
Sbjct: 244 gaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgac 303
Query: 366 tctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatg 416
||||||||||||||| |||| |||||| ||| ||||||||||||||||||||
Sbjct: 304 tctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatg 363
Query: 417 atgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctc 474
|||| ||||| | |||||||| || |||| |||| ||||||||||||||||||||
Sbjct: 364 gtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcagctc 423
Query: 475 t 475
|
Sbjct: 424 t 424
>gb|BG052268.1|BG052268 RHIZ2_12_D08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 513
Score = 507 bits (256), Expect = e-142
Identities = 389/432 (90%), Gaps = 11/432 (2%)
Strand = Plus / Plus
Query: 55 tgattgacaacccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaat 114
|||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 1 tgattgccaatccagatttcaaggatgatccatacatctatgcatttgacagcctgaagt 60
Query: 115 acattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatca 174
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 acattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatca 120
Query: 175 ctgatgatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggagg 234
||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 121 ctgatgaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggagg 180
Query: 235 cagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagg 294
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagg 240
Query: 295 gtggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatg 354
|||| |||||||| ||||| |||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 241 gtggtgatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgagg 300
Query: 355 acaaggccgactctgatgccgaggatgacaag---gactct------gaggagcacgacg 405
||||||| |||||||||||||||||| |||| |||||| ||| |||||||||
Sbjct: 301 acaaggctgactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacg 360
Query: 406 agctctagatgatgagtatgat--agaggtggccactgacattggtgccgttggcctgga 463
||||||||||| |||| ||||| | |||||||| || |||| |||| |||||||||
Sbjct: 361 agctctagatggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctgga 420
Query: 464 tttatcagctct 475
||||||| ||||
Sbjct: 421 tttatcaactct 432
>gb|BG052255.1|BG052255 RHIZ2_12_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 601
Score = 505 bits (255), Expect = e-141
Identities = 385/427 (90%), Gaps = 11/427 (2%)
Strand = Plus / Plus
Query: 60 gacaacccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacatt 119
||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 1 gacaatccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacatt 60
Query: 120 ggcattgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgat 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 ggcattgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgat 120
Query: 180 gatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagag 239
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagag 180
Query: 240 aagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggc 299
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggt 240
Query: 300 gatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaag 359
|||||||| ||||| |||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 241 gatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaag 300
Query: 360 gccgactctgatgccgaggatgacaag---gactct------gaggagcacgacgagctc 410
|| |||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 301 gctgactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctc 360
Query: 411 tagatgatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttat 468
|||||| |||| ||||| | |||||||| || |||| |||| ||||||||||||||
Sbjct: 361 tagatggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttat 420
Query: 469 cagctct 475
|| ||||
Sbjct: 421 caactct 427
>gb|BM326824.1|BM326824 PIC1_3_E02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 575
Score = 505 bits (255), Expect = e-141
Identities = 385/427 (90%), Gaps = 11/427 (2%)
Strand = Plus / Plus
Query: 60 gacaacccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacatt 119
||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 1 gacaatccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacatt 60
Query: 120 ggcattgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgat 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 ggcattgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgat 120
Query: 180 gatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagag 239
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagag 180
Query: 240 aagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggc 299
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggt 240
Query: 300 gatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaag 359
|||||||| ||||| |||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 241 gatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaag 300
Query: 360 gccgactctgatgccgaggatgacaag---gactct------gaggagcacgacgagctc 410
|| |||||||||||||||||| |||| |||||| ||| ||||||||||||||
Sbjct: 301 gctgactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctc 360
Query: 411 tagatgatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttat 468
|||||| |||| ||||| | |||||||| || |||| |||| ||||||||||||||
Sbjct: 361 tagatggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttat 420
Query: 469 cagctct 475
|| ||||
Sbjct: 421 caactct 427
>gb|BE364084.1|BE364084 PI1_11_H08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 592
Score = 492 bits (248), Expect = e-137
Identities = 375/416 (90%), Gaps = 11/416 (2%)
Strand = Plus / Plus
Query: 71 tttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcattgagct 130
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 1 tttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcattgagct 60
Query: 131 gtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgtt 190
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 61 gtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccctgcgtt 120
Query: 191 ggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgcttt 250
|||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 121 ggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggctgcttt 180
Query: 251 cgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacga 310
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 181 cgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgatgagga 240
Query: 311 tgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactctga 370
||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 241 tgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactctga 300
Query: 371 tgccgaggatgacaag---gactct------gaggagcacgacgagctctagatgatgag 421
|||||||||| |||| |||||| ||| |||||||||||||||||||| ||||
Sbjct: 301 tgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatggtgag 360
Query: 422 tatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctct 475
||||| | |||||||| || |||| |||| |||||||||||||||| ||||
Sbjct: 361 gatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactct 416
>gb|BG946976.1|BG946976 IP1_2_A06.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 578
Score = 440 bits (222), Expect = e-122
Identities = 352/394 (89%), Gaps = 11/394 (2%)
Strand = Plus / Plus
Query: 93 tatgcatttgacagcctgaaatacattggcattgagctgtggcaggttaaatcaggcact 152
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tatgcatttgacagcctgaagtacattggcattgagctgtggcaggttaaatcaggcact 62
Query: 153 ttgtttgacaacatcatcatcactgatgatcctgcgttggccaagacttttgcagaggag 212
|||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 63 ttgtttgacaacttcatcatcactcatgaccctgcgttggccaagactttcgcagaggag 122
Query: 213 acatggggcaagcacaaggaggcagagaagactgctttcgatgaggctgagaaaaagaag 272
|| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 123 acctggggcaagcacaaggaggcagagaaggctgctttcgatgcggctgagaaaaagaag 182
Query: 273 gaagaagaggaagccgccaagggtggcgatgatgacgatgatgacctagaggatgaggca 332
|||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| |
Sbjct: 183 gaagaagaggaagccgccaagggtggtgatgatgaggatgtcgacctagaggatgaggaa 242
Query: 333 gacgatgacaaggcagacgatgacaaggccgactctgatgccgaggatgacaag---gac 389
|||||||| ||||||||||| |||||||| |||| ||||||||||||| |||| |||
Sbjct: 243 gacgatgagaaggcagacgaggacaaggctgactttgatgccgaggatagcaaggacgac 302
Query: 390 tct------gaggagcacgacgagctctagatgatgagtatgat--agaggtggccactg 441
||| ||| |||||||||||||||||||| |||| ||||| | |||||||| |
Sbjct: 303 tctgatgatgagaagcacgacgagctctagatggtgaggatgatgatgttgtggccaccg 362
Query: 442 acattggtgccgttggcctggatttatcagctct 475
| |||| |||| |||||||||||||||| ||||
Sbjct: 363 aacttggagccgctggcctggatttatcaactct 396
>gb|BG103746.1|BG103746 RHIZ2_40_C11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 434
Score = 430 bits (217), Expect = e-119
Identities = 335/373 (89%), Gaps = 11/373 (2%)
Strand = Plus / Plus
Query: 114 tacattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatc 173
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 tacattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatc 61
Query: 174 actgatgatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggag 233
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 62 actgatgaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggag 121
Query: 234 gcagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaag 293
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaag 181
Query: 294 ggtggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgat 353
||||| |||||||| ||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 182 ggtggtgatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgag 241
Query: 354 gacaaggccgactctgatgccgaggatgacaag---gactct------gaggagcacgac 404
|||||||| |||||||||||||||||| |||| |||||| ||| ||||||||
Sbjct: 242 gacaaggctgactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgac 301
Query: 405 gagctctagatgatgagtatgat--agaggtggccactgacattggtgccgttggcctgg 462
|||||||||||| |||| ||||| | |||||||| || |||| |||| ||||||||
Sbjct: 302 gagctctagatggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctgg 361
Query: 463 atttatcagctct 475
|||||||| ||||
Sbjct: 362 atttatcaactct 374
>gb|BG558125.1|BG558125 RHIZ2_67_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 531
Score = 430 bits (217), Expect = e-119
Identities = 335/373 (89%), Gaps = 11/373 (2%)
Strand = Plus / Plus
Query: 114 tacattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatc 173
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tacattggcattgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatc 60
Query: 174 actgatgatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggag 233
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 61 actgatgaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggag 120
Query: 234 gcagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaag 293
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaag 180
Query: 294 ggtggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgat 353
||||| |||||||| ||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 181 ggtggtgatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgag 240
Query: 354 gacaaggccgactctgatgccgaggatgacaag---gactct------gaggagcacgac 404
|||||||| |||||||||||||||||| |||| |||||| ||| ||||||||
Sbjct: 241 gacaaggctgactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgac 300
Query: 405 gagctctagatgatgagtatgat--agaggtggccactgacattggtgccgttggcctgg 462
|||||||||||| |||| ||||| | |||||||| || |||| |||| ||||||||
Sbjct: 301 gagctctagatggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctgg 360
Query: 463 atttatcagctct 475
|||||||| ||||
Sbjct: 361 atttatcaactct 373
>gb|CN127412.1|CN127412 RHOH1_22_H01.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H01_A002 5', mRNA sequence
Length = 756
Score = 420 bits (212), Expect = e-116
Identities = 245/256 (95%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 560
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 561 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 620
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 621 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 680
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 681 gcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggct 740
Query: 246 gctttcgatgaggctg 261
|||||||||| |||||
Sbjct: 741 gctttcgatgcggctg 756
>gb|CF770838.1|CF770838 DSBF1_10_D03.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_10_D03_A010 3', mRNA sequence
Length = 572
Score = 412 bits (208), Expect = e-113
Identities = 326/364 (89%), Gaps = 11/364 (3%)
Strand = Plus / Plus
Query: 123 attgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgat 182
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 attgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgac 60
Query: 183 cctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaag 242
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 cctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaag 120
Query: 243 actgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgat 302
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 gctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgat 180
Query: 303 gatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggcc 362
||||| ||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 181 gatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggct 240
Query: 363 gactctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctag 413
|||||||||||||||||| |||| |||||| ||| |||||||||||||||||
Sbjct: 241 gactctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctag 300
Query: 414 atgatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcag 471
||| |||| ||||| | |||||||| || |||| |||| ||||||||||||||||
Sbjct: 301 atggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaa 360
Query: 472 ctct 475
||||
Sbjct: 361 ctct 364
>gb|BM328687.1|BM328687 PIC1_25_D04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 511
Score = 400 bits (202), Expect = e-110
Identities = 323/362 (89%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 125 tgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcc 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 1 tgagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccc 60
Query: 185 tgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagac 244
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 61 tgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggc 120
Query: 245 tgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatga 304
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 tgctttcgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatga 180
Query: 305 tgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccga 364
||| ||||| | |||||||||||||| ||||||||| ||||||||||| |||||||| ||
Sbjct: 181 tgaggatgacgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctga 240
Query: 365 ctctgatgccgaggatgacaag---gactct------gaggagcacgacgagctctagat 415
|||||||||||||||| |||| |||||| ||| |||||||||||||||||||
Sbjct: 241 ctctgatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagat 300
Query: 416 gatgagtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagct 473
| |||| ||||| | |||||||| || |||| |||| |||||||||||||||| ||
Sbjct: 301 ggtgaggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaact 360
Query: 474 ct 475
||
Sbjct: 361 ct 362
>gb|BF587612.1|BF587612 FM1_38_F02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 541
Score = 396 bits (200), Expect = e-108
Identities = 318/356 (89%), Gaps = 11/356 (3%)
Strand = Plus / Plus
Query: 131 gtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgtt 190
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 1 gtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccctgcgtt 60
Query: 191 ggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgcttt 250
|||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 61 ggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggctgcttt 120
Query: 251 cgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacga 310
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 121 cgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgatgagga 180
Query: 311 tgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactctga 370
||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 181 tgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactctga 240
Query: 371 tgccgaggatgacaag---gactct------gaggagcacgacgagctctagatgatgag 421
|||||||||| |||| |||||| ||| |||||||||||||||||||| ||||
Sbjct: 241 tgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatggtgag 300
Query: 422 tatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctct 475
||||| | |||||||| || |||| |||| |||||||||||||||| ||||
Sbjct: 301 gatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactct 356
>gb|CF482442.1|CF482442 POL1_7_A09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_7_A09_A002 3', mRNA sequence
Length = 620
Score = 375 bits (189), Expect = e-102
Identities = 226/237 (95%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 39 aaatggaaggcacctatgattgacaacccagatttcaaggatgatccgtacatttatgca 98
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 1 aaatggaaggcacctatgattgacaatccagatttcaaggatgatccatacatctatgca 60
Query: 99 tttgacagcctgaaatacattggcattgagctgtggcaggttaaatcaggcactttgttt 158
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgacagcctgaagtacattggcattgagctgtggcaggttaaatcaggcactttgttt 120
Query: 159 gacaacatcatcatc-actgatgatcctgcgttggccaagacttttgcagaggagacatg 217
|||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 121 gacaacttcatcatcnactgatgaccctgcgttggccaagactttcgcagaggagacctg 180
Query: 218 gggcaagcacaaggaggcagagaagactgctttcgatgaggctgagaaaaagaagga 274
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 181 gggcaagcacaaggaggcagagaaggctgctttcgatgcggctgagaaaaagaagga 237
Score = 107 bits (54), Expect = 1e-021
Identities = 148/178 (83%), Gaps = 11/178 (6%)
Strand = Plus / Plus
Query: 309 gatgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactct 368
||||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct: 236 gatgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactct 295
Query: 369 gatgccgaggatgacaag---gactct------gaggagcacgacgagctctagatgatg 419
|||||||||||| |||| |||||| ||| |||||||||||||||||||| ||
Sbjct: 296 gatgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatggtg 355
Query: 420 agtatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctct 475
|| ||||| | |||||||| || |||| |||| |||||||||||||||| ||||
Sbjct: 356 aggatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactct 413
>gb|CF488370.1|CF488370 POL1_49_B07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_B07_A002 5', mRNA sequence
Length = 556
Score = 365 bits (184), Expect = 4e-099
Identities = 211/220 (95%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 220 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 161
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 160 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 101
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 100 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 41
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagc 225
||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 40 gcgttggccaagactttcgcagaggagacctggggcaagc 1
>gb|CD206176.1|CD206176 HS1_21_A03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_21_A03_A012 3', mRNA sequence
Length = 520
Score = 363 bits (183), Expect = 1e-098
Identities = 298/335 (88%), Gaps = 11/335 (3%)
Strand = Plus / Plus
Query: 152 tttgtttgacaacatcatcatcactgatgatcctgcgttggccaagacttttgcagagga 211
||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1 tttgtttgacaacttcatcatcactgatgaccctgcgttggccaagactttcgcagagga 60
Query: 212 gacatggggcaagcacaaggaggcagagaagactgctttcgatgaggctgagaaaaagaa 271
||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 61 gacctggggcaagcacaaggaggcagagaaggctgctttcgatgcggctgagaaaaagaa 120
Query: 272 ggaagaagaggaagccgccaagggtggcgatgatgacgatgatgacctagaggatgaggc 331
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 121 ggaagaagaggaagccgccaagggtggtgatgatgaggatgacgacctagaggatgagga 180
Query: 332 agacgatgacaaggcagacgatgacaaggccgactctgatgccgaggatgacaag---ga 388
||||||||| ||||||||||| |||||||| |||||||||||||||||| |||| ||
Sbjct: 181 agacgatgagaaggcagacgaggacaaggctgactctgatgccgaggatagcaaggacga 240
Query: 389 ctct------gaggagcacgacgagctctagatgatgagtatgat--agaggtggccact 440
|||| ||| |||||||||||||||||||| |||| ||||| | ||||||||
Sbjct: 241 ctctgatgatgagaagcacgacgagctctagatggtgaggatgatgatgttgtggccacc 300
Query: 441 gacattggtgccgttggcctggatttatcagctct 475
|| |||| |||| |||||||||||||||||||||
Sbjct: 301 gaacttggagccgctggcctggatttatcagctct 335
>gb|CD205909.1|CD205909 HS1_19_F09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_19_F09_A012 3', mRNA sequence
Length = 505
Score = 333 bits (168), Expect = 1e-089
Identities = 234/256 (91%)
Strand = Plus / Plus
Query: 134 gcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgttggc 193
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 1 gcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgcccctgcgttggc 60
Query: 194 caagacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgctttcga 253
||||||||| ||||||||||| |||||||||| |||||||||||||||| ||||||||||
Sbjct: 61 caagactttcgcagaggagacctggggcaagcccaaggaggcagagaaggctgctttcga 120
Query: 254 tgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacgatga 313
|| |||||||||||||||||||||||||||| || |||||||||| |||||||| ||||
Sbjct: 121 tgcggctgagaaaaagaaggaagaagaggaaccccccaagggtggtgatgatgaggatgc 180
Query: 314 tgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactctgatgc 373
| |||||||||||||| ||||||||| ||||||||||| |||||||| |||| ||||||
Sbjct: 181 cgccctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactttgatgc 240
Query: 374 cgaggatgacaaggac 389
||||||| |||||||
Sbjct: 241 cgaggatagcaaggac 256
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 445 ttggtgccgttggcctggatttatcagctct 475
|||| |||| |||||||||||||||||||||
Sbjct: 323 ttggagccgctggcctggatttatcagctct 353
>gb|CF770425.1|CF770425 DSBF1_7_E04.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_7_E04_A010 3', mRNA sequence
Length = 493
Score = 333 bits (168), Expect = 1e-089
Identities = 283/320 (88%), Gaps = 11/320 (3%)
Strand = Plus / Plus
Query: 167 catcatcactgatgatcctgcgttggccaagacttttgcagaggagacatggggcaagca 226
||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1 catcatcactgatgaccctgcgttggccaagactttcgcagaggagacctggggcaagca 60
Query: 227 caaggaggcagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagc 286
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 caaggaggcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagc 120
Query: 287 cgccaagggtggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggc 346
|||||||||||| |||||||| ||||| |||||||||||||||| ||||||||| |||||
Sbjct: 121 cgccaagggtggtgatgatgaggatgacgacctagaggatgaggaagacgatgagaaggc 180
Query: 347 agacgatgacaaggccgactctgatgccgaggatgacaag---gactct------gagga 397
|||||| |||||||| |||||||||||||||||| |||| |||||| ||| |
Sbjct: 181 agacgaggacaaggctgactctgatgccgaggatagcaaggacgactctgatgatgagaa 240
Query: 398 gcacgacgagctctagatgatgagtatgat--agaggtggccactgacattggtgccgtt 455
||||||||||||||||||| |||| ||||| | |||||||| || |||| |||| |
Sbjct: 241 gcacgacgagctctagatggtgaggatgatgatgttgtggccaccgaacttggagccgct 300
Query: 456 ggcctggatttatcagctct 475
||||||||||||||| ||||
Sbjct: 301 ggcctggatttatcaactct 320
>gb|CD231796.1|CD231796 SS1_23_D05.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_D05_A012 5', mRNA sequence
Length = 655
Score = 317 bits (160), Expect = 8e-085
Identities = 181/188 (96%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 468 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 527
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 528 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 587
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 588 gagctgtggcaggttaaatcaggcactttgtttgacaacttcatcatcactgatgaccct 647
Query: 186 gcgttggc 193
||||||||
Sbjct: 648 gcgttggc 655
>gb|CX618037.1|CX618037 GABR1_37_H01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_H01_A002 3', mRNA sequence
Length = 713
Score = 303 bits (153), Expect = 1e-080
Identities = 198/213 (92%)
Strand = Plus / Plus
Query: 177 gatgatcctgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggca 236
||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1 gatgaccctgcgttggccaagactttcgcagaggagacctggggcaagcacaaggaggca 60
Query: 237 gagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggt 296
|||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 gagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagcccccaagggt 120
Query: 297 ggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcagacgatgac 356
|| |||||||| ||||| |||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 121 ggtgatgatgaggatgacgacctagaggatgaggaagacgatgagaaggcagacgaggac 180
Query: 357 aaggccgactctgatgccgaggatgacaaggac 389
||||| |||||||||||||||||| |||||||
Sbjct: 181 aaggctgactctgatgccgaggatagcaaggac 213
>gb|BI245678.1|BI245678 IP1_68_G07.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 505
Score = 293 bits (148), Expect = 1e-077
Identities = 260/296 (87%), Gaps = 11/296 (3%)
Strand = Plus / Plus
Query: 191 ggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgcttt 250
|||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 2 ggccaagactttcgcagaggagacctggggcaagcacaaggaggcagagaaggctgcttt 61
Query: 251 cgatgaggctgagaaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacga 310
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 62 cgatgcggctgagaaaaagaaggaagaagaggaagccgccaagggtggtgatgatgagga 121
Query: 311 tgatgacctagaggatgaggcagacgatgacaaggcagacgatgacaaggccgactctga 370
||| |||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 122 tgacgacctagaggatgaggaagacgatgagaaggcagacgaggacaaggctgactctga 181
Query: 371 tgccgaggatgacaag---gactct------gaggagcacgacgagctctagatgatgag 421
|||||||||| |||| |||||| ||| |||||||||||||||||||| ||||
Sbjct: 182 tgccgaggatagcaaggacgactctgatgatgagaagcacgacgagctctagatggtgag 241
Query: 422 tatgat--agaggtggccactgacattggtgccgttggcctggatttatcagctct 475
||||| | |||||||| || |||| |||| |||||||||||||||| ||||
Sbjct: 242 gatgatgatgttgtggccaccgaacttggagccgctggcctggatttatcaactct 297
>gb|BE918471.1|BE918471 OV1_4_C03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 266 bits (134), Expect = 3e-069
Identities = 243/278 (87%), Gaps = 11/278 (3%)
Strand = Plus / Plus
Query: 209 ggagacatggggcaagcacaaggaggcagagaagactgctttcgatgaggctgagaaaaa 268
|||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 1 ggagacctggggcaagcacaaggaggcagagaaggctgctttcgatgcggctgagaaaaa 60
Query: 269 gaaggaagaagaggaagccgccaagggtggcgatgatgacgatgatgacctagaggatga 328
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 61 gaaggaagaagaggaagccgccaagggtggtgatgatgaggatgacgacctagaggatga 120
Query: 329 ggcagacgatgacaaggcagacgatgacaaggccgactctgatgccgaggatgacaag-- 386
|| ||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||
Sbjct: 121 ggaagacgatgagaaggcagacgaggacaaggctgactctgatgccgaggatagcaagga 180
Query: 387 -gactct------gaggagcacgacgagctctagatgatgagtatgat--agaggtggcc 437
|||||| ||| |||||||||||||||||||| |||| ||||| | ||||||
Sbjct: 181 cgactctgatgatgagaagcacgacgagctctagatggtgaggatgatgatgttgtggcc 240
Query: 438 actgacattggtgccgttggcctggatttatcagctct 475
|| || |||| |||| |||||||||||||||| ||||
Sbjct: 241 accgaacttggagccgctggcctggatttatcaactct 278
>gb|BG273344.1|BG273344 OV2_27_C02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 406
Score = 260 bits (131), Expect = 2e-067
Identities = 246/283 (86%), Gaps = 11/283 (3%)
Strand = Plus / Plus
Query: 204 gcagaggagacatggggcaagcacaaggaggcagagaagactgctttcgatgaggctgag 263
||||||||||| |||||||||| |||||||||||||||| |||||||||||| | |||||
Sbjct: 2 gcagaggagacctggggcaagcccaaggaggcagagaaggctgctttcgatgcgcctgag 61
Query: 264 aaaaagaaggaagaagaggaagccgccaagggtggcgatgatgacgatgatgacctagag 323
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 62 aaaaagaaggaagaagaggaagccgccaagggtggtgatgatgaggatgacgacctagag 121
Query: 324 gatgaggcagacgatgacaaggcagacgatgacaaggccgactctgatgccgaggatgac 383
||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||| |
Sbjct: 122 gatgaggaagacgatgagaaggcagacgaggacaaggctgactctgatgccgaggatagc 181
Query: 384 aag---gactct------gaggagcacgacgagctctagatgatgagtatgat--agagg 432
||| |||||| ||| |||||||||||||||||||| |||| ||||| | |
Sbjct: 182 aaggacgactctgatgatgagaagcacgacgagctctagatggtgaggatgatgatgttg 241
Query: 433 tggccactgacattggtgccgttggcctggatttatcagctct 475
||||||| || |||| |||| |||||||||||||||| ||||
Sbjct: 242 tggccaccgaacttggagccgctggcctggatttatcaactct 284
>gb|BG102552.1|BG102552 RHIZ2_34_E01.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 429
Score = 254 bits (128), Expect = 1e-065
Identities = 234/268 (87%), Gaps = 11/268 (4%)
Strand = Plus / Plus
Query: 219 ggcaagcacaaggaggcagagaagactgctttcgatgaggctgagaaaaagaaggaagaa 278
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggcaagcacaaggaggcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaa 60
Query: 279 gaggaagccgccaagggtggcgatgatgacgatgatgacctagaggatgaggcagacgat 338
|||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||
Sbjct: 61 gaggaagccgccaagggtggtgatgatgaggatgacgacctagaggatgaggaagacgat 120
Query: 339 gacaaggcagacgatgacaaggccgactctgatgccgaggatgacaag---gactct--- 392
|| ||||||||||| |||||||| |||||||||||||||||| |||| ||||||
Sbjct: 121 gagaaggcagacgaggacaaggctgactctgatgccgaggatagcaaggacgactctgat 180
Query: 393 ---gaggagcacgacgagctctagatgatgagtatgat--agaggtggccactgacattg 447
||| |||||||||||||||||||| |||| ||||| | |||||||| || |||
Sbjct: 181 gatgagaagcacgacgagctctagatggtgaggatgatgatgttgtggccaccgaacttg 240
Query: 448 gtgccgttggcctggatttatcagctct 475
| |||| |||||||||||||||| ||||
Sbjct: 241 gagccgctggcctggatttatcaactct 268
>gb|CF489846.1|CF489846 POL1_61_A08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_A08_A002 3', mRNA sequence
Length = 664
Score = 224 bits (113), Expect = 9e-057
Identities = 225/260 (86%), Gaps = 13/260 (5%)
Strand = Plus / Minus
Query: 229 aggaggcagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccg 288
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 295 aggaggcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccg 236
Query: 289 ccaagggtggcga-tgatgacgatgatgacctagaggatgaggcagacgatgacaaggca 347
|||||||||| || |||||| ||||| |||||||||||||||| ||||||||| ||||||
Sbjct: 235 ccaagggtggtgagtgatgaggatgacgacctagaggatgaggaagacgatgagaaggca 176
Query: 348 gacgatgacaaggccgactctgatgccgaggatgacaag---gactct------gaggag 398
||||| |||||||| |||||||||||||||||| |||| |||||| ||| ||
Sbjct: 175 gacgaggacaaggctgactctgatgccgaggatagcaaggacgactctgatgatgagaag 116
Query: 399 cacgacgagctctagatgatgagtatgataga---ggtggccactgacattggtgccgtt 455
|||||||||||||||||| |||| ||||| || |||||||| || |||| |||| |
Sbjct: 115 cacgacgagctctagatggtgaggatgatggatgttgtggccaccgaacttggagccgct 56
Query: 456 ggcctggatttatcagctct 475
||||||||||||||| ||||
Sbjct: 55 ggcctggatttatcaactct 36
>gb|CF489926.1|CF489926 POL1_61_A08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_A08_A002 5', mRNA sequence
Length = 702
Score = 224 bits (113), Expect = 9e-057
Identities = 149/161 (92%)
Strand = Plus / Minus
Query: 229 aggaggcagagaagactgctttcgatgaggctgagaaaaagaaggaagaagaggaagccg 288
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 664 aggaggcagagaaggctgctttcgatgcggctgagaaaaagaaggaagaagaggaagccg 605
Query: 289 ccaagggtggcgatgatgacgatgatgacctagaggatgaggcagacgatgacaaggcag 348
|||||||||| |||||||| ||||| | |||||||||||||| ||||||||| |||||||
Sbjct: 604 ccaagggtggtgatgatgaggatgacgccctagaggatgaggaagacgatgagaaggcag 545
Query: 349 acgatgacaaggccgactctgatgccgaggatgacaaggac 389
|||| |||||||| |||||||||||||||||| |||||||
Sbjct: 544 acgaggacaaggctgactctgatgccgaggatagcaaggac 504
>gb|CD231552.1|CD231552 SS1_22_E10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_E10_A012 3', mRNA sequence
Length = 730
Score = 216 bits (109), Expect = 2e-054
Identities = 226/265 (85%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
||||||||||||||||| || ||||| |||| || |||||||| ||| |||||||||||
Sbjct: 7 caaaagaaaatcaagaatccagactacaagggcaagtggaaggcccctttgattgacaac 66
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||| ||||| ||||| || || |||||||| |||| |||||||||||
Sbjct: 67 ccagatttcaaggacgatccttacatctacgcttttgacagtttgaagcacattggcatt 126
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||||||||| |||||||| |||||||| | || |||||||| |||
Sbjct: 127 gagctgtggcaggttaaatcaggaactttgttcgacaacattttgataactgatgaccct 186
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
| || ||||||| || |||| |||||| ||||||||||| || || || |||||| ||
Sbjct: 187 gagtacgccaagaagttagcagtggagacctggggcaagcagaaagatgctgagaaggct 246
Query: 246 gctttcgatgaggctgagaaaaaga 270
|| ||||| ||||||||||||||||
Sbjct: 247 gccttcgacgaggctgagaaaaaga 271
>gb|CF483082.1|CF483082 POL1_11_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_11_D12_A002 3', mRNA sequence
Length = 620
Score = 208 bits (105), Expect = 5e-052
Identities = 120/125 (96%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 125 caaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatgattgacaat 66
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 65 ccagatttcaaggatgatccatacatctatgcatttgacagcctgaagtacattggcatt 6
Query: 126 gagct 130
|||||
Sbjct: 5 gagct 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 247,043
Number of Sequences: 832831
Number of extensions: 247043
Number of successful extensions: 73458
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73067
Number of HSP's gapped (non-prelim): 386
length of query: 725
length of database: 491,359,669
effective HSP length: 20
effective length of query: 705
effective length of database: 474,703,049
effective search space: 334665649545
effective search space used: 334665649545
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)