BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.130
(860 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1... 718 0.0
gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1... 718 0.0
gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stresse... 718 0.0
gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots S... 718 0.0
gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated ... 710 0.0
gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated ... 710 0.0
gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum b... 710 0.0
gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots S... 710 0.0
gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stres... 702 0.0
gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seed... 686 0.0
gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum b... 686 0.0
gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum b... 682 0.0
gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stres... 672 0.0
gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves... 634 e-180
gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cD... 626 e-178
gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Me... 601 e-170
gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (L... 551 e-155
gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (L... 551 e-155
gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 ... 551 e-155
gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stresse... 551 e-155
gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots S... 551 e-155
gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots S... 551 e-155
gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Me... 547 e-154
gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Me... 537 e-151
gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1... 535 e-150
gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seed... 504 e-141
gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum b... 504 e-141
gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 ... 488 e-136
gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stresse... 486 e-135
gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorg... 480 e-133
gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Me... 474 e-132
gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sor... 470 e-130
gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) So... 436 e-120
gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stresse... 432 e-119
gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (L... 424 e-117
gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stresse... 424 e-117
gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorgh... 394 e-108
gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation... 394 e-108
gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (L... 387 e-105
gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2)... 381 e-104
gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum ... 381 e-104
gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1... 379 e-103
gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation... 355 4e-096
gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cD... 349 3e-094
gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1... 309 2e-082
gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (L... 301 6e-080
gb|CF772635.1|CF772635 DSBF1_37_E06.g1_A010 Drought-stresse... 299 2e-079
gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2... 276 3e-072
gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorgh... 236 3e-060
gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorgh... 236 3e-060
gb|CW285308.1|CW285308 104_762_11410262_116_35504_055 Sorgh... 228 7e-058
gb|CW246228.1|CW246228 104_707_11221254_116_35083_029 Sorgh... 220 2e-055
gb|BG053886.1|BG053886 RHIZ2_11_B10.b1_A003 Rhizome2 (RHIZ2... 161 1e-037
gb|CD230975.1|CD230975 SS1_7_B05.b1_A012 Salt-stressed seed... 161 1e-037
gb|CW029921.1|CW029921 104_257_10499952_114_30401 Sorghum m... 159 5e-037
gb|CW107572.1|CW107572 104_477_11096667_148_34472_002 Sorgh... 159 5e-037
gb|CW169777.1|CW169777 104_579_11154850_116_36506_033 Sorgh... 159 5e-037
gb|CW169899.1|CW169899 104_580_11154914_116_36512_013 Sorgh... 159 5e-037
gb|CW214124.1|CW214124 104_646_11193850_116_37049_047 Sorgh... 159 5e-037
gb|CW230230.1|CW230230 104_671_11207738_148_37266_001 Sorgh... 159 5e-037
gb|CW468548.1|CW468548 fsbb001f220m18f0 Sorghum methylation... 159 5e-037
gb|CW496453.1|CW496453 fsbb001f288l12f0 Sorghum methylation... 159 5e-037
gb|BZ781493.1|BZ781493 ii30a02.g1 WGS-SbicolorF (DH5a methy... 153 3e-035
gb|CL173970.1|CL173970 104_377_10891239_148_31792_375 Sorgh... 153 3e-035
gb|CW089548.1|CW089548 104_435_10948774_114_32612_095 Sorgh... 153 3e-035
gb|CW154611.1|CW154611 104_556_11145692_116_36354_068 Sorgh... 153 3e-035
gb|CW154612.1|CW154612 104_556_11145692_148_36353_068 Sorgh... 153 3e-035
gb|CW244794.1|CW244794 104_705_11220802_148_37591_033 Sorgh... 153 3e-035
gb|CW286289.1|CW286289 104_763_11410798_116_35512_081 Sorgh... 153 3e-035
gb|CW186439.1|CW186439 104_604_11166568_148_36711_058 Sorgh... 129 5e-028
gb|CW214125.1|CW214125 104_646_11193850_148_37053_047 Sorgh... 113 3e-023
gb|CL183381.1|CL183381 104_395_10898134_114_31917_358 Sorgh... 101 1e-019
gb|CL173969.1|CL173969 104_377_10891239_116_31793_375 Sorgh... 96 6e-018
gb|CW089549.1|CW089549 104_435_10948774_116_32613_095 Sorgh... 96 6e-018
gb|CW244793.1|CW244793 104_705_11220802_116_37592_033 Sorgh... 96 6e-018
gb|CL166028.1|CL166028 104_361_10809074_116_31821_290 Sorgh... 94 3e-017
gb|CW286290.1|CW286290 104_763_11410798_148_35645_081 Sorgh... 90 4e-016
gb|CL183382.1|CL183382 104_395_10898134_116_31918_358 Sorgh... 88 2e-015
gb|CW140199.1|CW140199 104_530_11135655_148_34918_054 Sorgh... 88 2e-015
gb|CW395806.1|CW395806 fsbb001f083p22f0 Sorghum methylation... 80 4e-013
gb|CW032064.1|CW032064 104_260_10501160_114_30365 Sorghum m... 72 9e-011
gb|CW160978.1|CW160978 104_567_11150166_148_36508_019 Sorgh... 72 9e-011
gb|BE596516.1|BE596516 PI1_57_B11.b1_A002 Pathogen induced ... 72 9e-011
gb|CD223548.1|CD223548 CCC1_28_E04.g1_A007 Callus culture/c... 72 9e-011
gb|CD225779.1|CD225779 CCC1_41_D01.g1_A007 Callus culture/c... 72 9e-011
gb|BE594316.1|BE594316 WS1_104_H03.b1_A002 Water-stressed 1... 70 4e-010
gb|CF488931.1|CF488931 POL1_53_C12.b1_A002 Pollen Sorghum b... 58 1e-006
gb|CD462876.1|CD462876 ETH1_40_D03.g2_A002 Ethylene-treated... 56 6e-006
gb|CL160730.1|CL160730 104_351_10805192_116_31825_248 Sorgh... 50 3e-004
gb|CL160729.1|CL160729 104_351_10805192_114_31824_248 Sorgh... 46 0.005
gb|CL171959.1|CL171959 104_374_10889805_116_31775_093 Sorgh... 46 0.005
gb|CL182264.1|CL182264 104_393_10897310_116_31922_302 Sorgh... 46 0.005
gb|CW032065.1|CW032065 104_260_10501160_115_30366 Sorghum m... 46 0.005
gb|CW190026.1|CW190026 104_611_11174277_148_36746_087 Sorgh... 46 0.005
gb|CN148759.1|CN148759 WOUND1_58_D02.g1_A002 Wounded leaves... 40 0.33
>gb|BE593970.1|BE593970 WS1_104_F03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 545
Score = 718 bits (362), Expect = 0.0
Identities = 443/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 26 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 85
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 86 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 145
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 146 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 205
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 206 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 265
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 266 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 325
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 326 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 385
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 386 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 445
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 446 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 495
>gb|BE593990.1|BE593990 WS1_104_H03.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 520
Score = 718 bits (362), Expect = 0.0
Identities = 443/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 4 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 63
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 64 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 123
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 124 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 183
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 184 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 243
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 244 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 303
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 304 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 363
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 364 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 423
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 424 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 473
>gb|CF757496.1|CF757496 DSAF1_18_F09.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_18_F09_A011 3', mRNA sequence
Length = 572
Score = 718 bits (362), Expect = 0.0
Identities = 443/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 16 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 75
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 76 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 135
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 136 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 195
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 196 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 255
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 256 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 315
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 316 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 375
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 376 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 435
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 436 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 485
>gb|CX606886.1|CX606886 ANR1_5_B06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 5', mRNA sequence
Length = 703
Score = 718 bits (362), Expect = 0.0
Identities = 443/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 81 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 140
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 141 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 200
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 260
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 261 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 320
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 321 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 380
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 440
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 441 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 500
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 501 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 550
Score = 56.0 bits (28), Expect = 6e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaa 634
||||||| | ||||||||||||||||||||||||||
Sbjct: 652 ttccagccctagaattcaaagctaagcattgcacaa 687
>gb|CD430958.1|CD430958 ETH1_6_C07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 3', mRNA sequence
Length = 662
Score = 710 bits (358), Expect = 0.0
Identities = 442/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 6 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 65
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 66 gacgttccgcaagtacagctaccgtggcgtcgaccttgatgcgctgctcgacatgtccac 125
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 126 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 185
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 186 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 245
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 246 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 305
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 306 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 365
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 366 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 425
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 426 gcccggtatcggtgccacccactcgtcgcggtttatccccctgaaatgag 475
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 636
Query: 659 tgagtta 665
|||||||
Sbjct: 637 tgagtta 643
>gb|CD431094.1|CD431094 ETH1_6_C07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_C07_A002 5', mRNA sequence
Length = 724
Score = 710 bits (358), Expect = 0.0
Identities = 442/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 101 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 160
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 161 gacgttccgcaagtacagctaccgtggcgtcgaccttgatgcgctgctcgacatgtccac 220
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 221 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 280
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 281 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 340
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 341 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 400
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 401 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 460
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 461 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 520
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 521 gcccggtatcggtgccacccactcgtcgcggtttatccccctgaaatgag 570
Score = 89.7 bits (45), Expect = 4e-016
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttgg 651
||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttgg 724
>gb|CF483791.1|CF483791 POL1_24_E09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 5', mRNA sequence
Length = 700
Score = 710 bits (358), Expect = 0.0
Identities = 442/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||| ||| || || ||||| |||||||| ||||||||||||||
Sbjct: 79 ttcaaccatggcggacgtcggtgtggagcctgaggtcgccgccggcgctcccaagaagag 138
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 139 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 198
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 199 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 258
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 259 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 318
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 319 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 378
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 438
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 439 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 498
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 499 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 548
Score = 85.7 bits (43), Expect = 6e-015
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgtt 649
||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgtt 700
>gb|CX606795.1|CX606795 ANR1_5_B06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B06_A002 3', mRNA sequence
Length = 662
Score = 710 bits (358), Expect = 0.0
Identities = 442/470 (94%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 60 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 119
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 120 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 179
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 180 cgacgacctcgtccagttcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 239
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 240 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 299
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 300 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 359
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 360 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 419
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 420 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 479
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 480 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 529
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgc 630
||||||| | ||||||||||||||||||||||
Sbjct: 631 ttccagccctagaattcaaagctaagcattgc 662
>gb|CN133859.1|CN133859 OX1_18_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 5', mRNA sequence
Length = 749
Score = 702 bits (354), Expect = 0.0
Identities = 441/470 (93%)
Strand = Plus / Plus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 110 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 169
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 170 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 229
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 230 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 289
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
|||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 290 gaggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 349
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 350 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 409
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 410 tggaagcattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 469
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 470 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 529
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 530 gcccggtatcggtgccacccactcgtcgtggtttatccctctgaaatgag 579
Score = 79.8 bits (40), Expect = 4e-013
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgct-gttttgttggaa 653
||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 ttccagccctagaattcaaagctaagcattgcacaattatgctggttttgttggaa 736
>gb|CD210076.1|CD210076 HS1_56_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 5', mRNA sequence
Length = 543
Score = 686 bits (346), Expect = 0.0
Identities = 424/450 (94%)
Strand = Plus / Plus
Query: 94 cggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagaggacgttccgca 153
||||||||||||| || || ||||| |||||||| |||||||||||||||||||||||||
Sbjct: 94 cggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccgca 153
Query: 154 agtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacgacctcg 213
||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 154 agtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacctcg 213
Query: 214 tccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagccca 273
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
Sbjct: 214 tccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaaccga 273
Query: 274 tggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctg 333
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 274 tggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaagccag 333
Query: 334 agccagtcaagacacatctccgtaacatgatcattgtccctgagatgattggaagcattg 393
||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 334 agccagtgaagacccatctccgcaacatgatcattgtccctgagatgattggaagcattg 393
Query: 394 ttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggcc 453
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 394 ttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggcc 453
Query: 454 actaccttgctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcg 513
|||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 454 actatcttgcagagttctccatctcctacaagccagtcaagcacggtaggcccggtatcg 513
Query: 514 gtgccacccactcctcgcggtttattcctc 543
||||||||||||| ||||||||||| ||||
Sbjct: 514 gtgccacccactcgtcgcggtttatccctc 543
>gb|CF489005.1|CF489005 POL1_53_C12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_53_C12_A002 5', mRNA sequence
Length = 635
Score = 686 bits (346), Expect = 0.0
Identities = 440/470 (93%), Gaps = 1/470 (0%)
Strand = Plus / Minus
Query: 83 ttcaatcatggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagag 142
||||| |||||||||||||||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 590 ttcaaccatggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagag 531
Query: 143 gacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccac 202
|||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 530 gacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccac 471
Query: 203 tgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaa 262
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 470 cgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaa 411
Query: 263 gaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctgg 322
| |||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 410 ggggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctgg 351
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| |||| ||||||||||||||||||||
Sbjct: 350 tgagaagccagagccagtgaagacccatctccgcaaca-catcattgtccctgagatgat 292
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 291 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 232
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 231 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 172
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 171 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 122
>gb|CF483714.1|CF483714 POL1_24_E09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_24_E09_A002 3', mRNA sequence
Length = 589
Score = 682 bits (344), Expect = 0.0
Identities = 410/432 (94%)
Strand = Plus / Plus
Query: 121 ccgccggagctcccaagaagaggacgttccgcaagtacagctaccgcggcgtcgacctag 180
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 1 ccgccggcgctcccaagaagaggacgttccgcaagtacagctaccgtggcgtcgacctcg 60
Query: 181 atgcgcttctcgacatgtccactgacgacctcgtccagctcttccccgcgcgcgccagga 240
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcgctgctcgacatgtccaccgacgacctcgtccagctcttccccgcgcgcgccagga 120
Query: 241 gaaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaagg 300
||||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||
Sbjct: 121 gaaggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaagg 180
Query: 301 cgaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaaca 360
|||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 181 cgaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaaca 240
Query: 361 tgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttca 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 tgatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttca 300
Query: 421 accaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctcct 480
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 301 accaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctcct 360
Query: 481 acaagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattc 540
||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 361 acaagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatcc 420
Query: 541 ctctgaaatgag 552
||||||||||||
Sbjct: 421 ctctgaaatgag 432
Score = 95.6 bits (48), Expect = 6e-018
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaag 654
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaag 589
>gb|CN133776.1|CN133776 OX1_18_F06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_18_F06_A002 3', mRNA sequence
Length = 603
Score = 672 bits (339), Expect = 0.0
Identities = 414/439 (94%)
Strand = Plus / Plus
Query: 114 gaggttgccgccggagctcccaagaagaggacgttccgcaagtacagctaccgcggcgtc 173
||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12 gaggtcgccgccggcgctcccaagaagaggacgttccgcaagtacagctaccgtggcgtc 71
Query: 174 gacctagatgcgcttctcgacatgtccactgacgacctcgtccagctcttccccgcgcgc 233
||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 72 gacctcgatgcgctgctcgacatgtccaccgacgacctcgtccagctcttccccgcgcgc 131
Query: 234 gccaggagaaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactg 293
|||||||||||||||||||||||| |||||||||| || ||||||||||||||||| |||
Sbjct: 132 gccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctg 191
Query: 294 cgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctc 353
||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||
Sbjct: 192 cgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctc 251
Query: 354 cgtaacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaag 413
|| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 252 cgcaacatgatcattgtccctgagatgattggaagcattgtcggtgtctacaatggcaag 311
Query: 414 accttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctcc 473
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 312 accttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctcc 371
Query: 474 atctcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcgg 533
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||
Sbjct: 372 atctcctacaagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgtgg 431
Query: 534 tttattcctctgaaatgag 552
||||| |||||||||||||
Sbjct: 432 tttatccctctgaaatgag 450
Score = 83.8 bits (42), Expect = 2e-014
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgt 648
||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgt 601
>gb|CN148682.1|CN148682 WOUND1_58_D02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_D02_A002 3', mRNA sequence
Length = 735
Score = 634 bits (320), Expect = e-180
Identities = 386/408 (94%)
Strand = Plus / Plus
Query: 145 cgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactg 204
|||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |
Sbjct: 151 cgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccg 210
Query: 205 acgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaaga 264
| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 211 aggacctcgtccagcttttccccgcgcgcgccaggagaaggttccagaggggtttgaaga 270
Query: 265 ggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtg 324
|||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 271 ggaaaccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctggtg 330
Query: 325 agaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattg 384
||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 331 agaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgattg 390
Query: 385 gaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgaga 444
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgaga 450
Query: 445 tgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcaggc 504
|||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 451 tgattggccactaccttgcagagttctccatctcctacaagccagtcaagcacggtaggc 510
Query: 505 ccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 511 ccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 558
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 719
Query: 659 tgagtta 665
|||||||
Sbjct: 720 tgagtta 726
>gb|BQ656110.1|BQ656110 pRC1098 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC1098, mRNA sequence
Length = 607
Score = 626 bits (316), Expect = e-178
Identities = 397/424 (93%)
Strand = Plus / Plus
Query: 129 gctcccaagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgctt 188
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 9 gctcccaagaagaggacgttccgcaagtacagctaccgtggcgtcgacctcgatgcgctg 68
Query: 189 ctcgacatgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttc 248
|||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 69 ctcgacatgtccaccgacgaccttgttcagctcttccccgcgcgcgccaggagaaggttc 128
Query: 249 cagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaag 308
||||||||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 129 cagaggggtttgaagaggaagccgatggccctcatcaagaagctgcgcaaggcgaaaaaa 188
Query: 309 gatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcatt 368
|||||||| |||||||||||||| |||||||| ||||| ||||| || ||||||||||||
Sbjct: 189 gatgctccagctggtgagaagccagagccagtgaagacccatcttcgcaacatgatcatt 248
Query: 369 gtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggtt 428
||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 249 gtccctgagatgattggaagcatcgtcggtgtctacaatggcaagaccttcaaccaggtt 308
Query: 429 gagatcaagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccg 488
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 309 gagatcaagcctgagatgattggccactatcttgcagagttctccatctcctacaagccg 368
Query: 489 gtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaa 548
||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 369 gtcaagcacggtaggcccggtattggtgccacccactcgtcgcggtttatccctctgaaa 428
Query: 549 tgag 552
||||
Sbjct: 429 tgag 432
Score = 95.6 bits (48), Expect = 6e-018
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaa-ttatgctgttttgttggaagtat 657
||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 534 ttccagccctagaattcaaagctaagcattgcacaatttatgctgttttgttggaagtat 593
Query: 658 ttgagtta 665
|||||||
Sbjct: 594 gtgagtta 601
>gb|BF480818.1|BF480818 FM1_14_C09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 484
Score = 601 bits (303), Expect = e-170
Identities = 378/403 (93%)
Strand = Plus / Plus
Query: 89 catggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagaggacgtt 148
|||||||||||||||||| || || ||||| |||||||| ||||||||||||||||||||
Sbjct: 82 catggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgtt 141
Query: 149 ccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacga 208
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 142 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgctcgacatgtccaccgacga 201
Query: 209 cctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaa 268
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 ccttgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaa 261
Query: 269 gcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaa 328
||| ||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 262 gccgatggccctcatcaagaagctgcgcaaggcgaaaaaagatgctccagctggtgagaa 321
Query: 329 gcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattggaag 388
||| |||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 322 gccagagccagtgaagacccatcttcgcaacatgatcattgtccctgagatgattggaag 381
Query: 389 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgat 448
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 441
Query: 449 cggccactaccttgctgagttctccatctcctacaagccggtc 491
|||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 442 tggccactatcttgcagagttctccatctcctacaagccggtc 484
>gb|AW563755.1|AW563755 LG1_248_G12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 588
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 2 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 61
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 62 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 121
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 122 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 181
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 182 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 241
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 301
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 302 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 361
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 362 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 419
>gb|AW672010.1|AW672010 LG1_354_E09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 531
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 112 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 171
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 172 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 231
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 232 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 291
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 292 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 351
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 411
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 412 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 471
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 472 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 529
>gb|BE592601.1|BE592601 WS1_95_F01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 124 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 183
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 184 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 243
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 244 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 303
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 304 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 363
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 423
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 424 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 483
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 484 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 541
>gb|CF757003.1|CF757003 DSAF1_12_D10.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_12_D10_A011 3', mRNA sequence
Length = 592
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 22 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 81
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 82 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 141
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 142 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 201
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 202 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 261
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 321
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 322 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 381
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 382 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 439
>gb|CX606679.1|CX606679 ANR1_4_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 3', mRNA sequence
Length = 690
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 125 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 184
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 185 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 244
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 245 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 304
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 305 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 364
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 424
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 425 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 484
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 485 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 542
>gb|CX606773.1|CX606773 ANR1_4_H06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_4_H06_A002 5', mRNA sequence
Length = 716
Score = 551 bits (278), Expect = e-155
Identities = 383/418 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 128 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 187
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 188 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 247
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 248 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 307
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 308 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 367
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 427
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 428 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 487
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 488 cacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 545
>gb|BF481993.1|BF481993 FM1_22_A06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 449
Score = 547 bits (276), Expect = e-154
Identities = 345/368 (93%)
Strand = Plus / Plus
Query: 89 catggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagaggacgtt 148
|||||||||||||||||| || || ||||| |||||||| ||||||||||||||||||||
Sbjct: 82 catggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgtt 141
Query: 149 ccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacga 208
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 142 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgctcgacatgtccaccgacga 201
Query: 209 cctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaa 268
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 ccttgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaa 261
Query: 269 gcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaa 328
||| ||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct: 262 gccgatggccctcatcaagaagctgcgcaaggcgaaaaaagatgctccagctggtgagaa 321
Query: 329 gcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattggaag 388
||| |||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 322 gccagagccagtgaagacccatcttcgcaacatgatcattgtccctgagatgattggaag 381
Query: 389 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgat 448
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cattgtcggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 441
Query: 449 cggccact 456
|||||||
Sbjct: 442 tggccact 449
>gb|BF480867.1|BF480867 FM1_14_C09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 583
Score = 537 bits (271), Expect = e-151
Identities = 347/371 (93%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 182 tgcgcttctcgacatgtccactgacgacctcgtccagctcttccccgcgcgcgccaggag 241
|||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tgcgctgctcgacatgtccaccgacgaccttgtccagctcttccccgcgcgcgccaggag 60
Query: 242 aaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggc 301
|||||||||||||||| | ||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 61 aaggttccagaggggttt-aagaggaagccgatggccctcatcaagaagctgcgcaaggc 119
Query: 302 gaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacat 361
|||||| |||||||| |||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct: 120 gaaaaaagatgctccagctggtgagaagccagagccagtgaagacccatcttcgcaacat 179
Query: 362 gatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 180 gatcattgtccctgagatgattggaagcattgtcggtgtctacaatggcaagaccttcaa 239
Query: 422 ccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctccta 481
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 240 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 299
Query: 482 caagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcc 541
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 300 caagccggtcaagcacggtaggcccggtattggtgccacccactcgtcgcggtttatccc 359
Query: 542 tctgaaatgag 552
|||||||||||
Sbjct: 360 tctgaaatgag 370
Score = 101 bits (51), Expect = 1e-019
Identities = 89/99 (89%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaa-ttatgctgttttgttggaagtat 657
||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 472 ttccagccctagaattcaaagctaagcattgcacaatttatgctgttttgttggaagtat 531
Query: 658 ttgagtta-atcatatctaagctgagttgctacgttctt 695
||||||| ||| |||||||| || | ||||| ||||||
Sbjct: 532 gtgagttatatcgtatctaagatgtgatgctatgttctt 570
>gb|BE593837.1|BE593837 WS1_103_A01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 535 bits (270), Expect = e-150
Identities = 382/418 (91%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 6 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 65
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 66 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 125
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 126 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 185
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 186 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 245
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 305
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 306 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 365
Query: 495 cacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||| ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||
Sbjct: 366 cacggtaggcccggtatcggtgctaccca-tcttcgcggttcattcctctgaagtgag 422
>gb|CD209978.1|CD209978 HS1_56_B01.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_B01_A012 3', mRNA sequence
Length = 503
Score = 504 bits (254), Expect = e-141
Identities = 305/322 (94%)
Strand = Plus / Plus
Query: 231 cgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaa 290
||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 1 cgcgccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaag 60
Query: 291 ctgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacat 350
|||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 61 ctgcgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtgaagacccat 120
Query: 351 ctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggc 410
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 ctccgcaacatgatcattgtccctgagatgattggaagcattgttggtgtctacaatggc 180
Query: 411 aagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttc 470
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 181 aagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttc 240
Query: 471 tccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactcctcg 530
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 241 tccatctcctacaagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcg 300
Query: 531 cggtttattcctctgaaatgag 552
|||||||| |||||||||||||
Sbjct: 301 cggtttatccctctgaaatgag 322
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 483
Query: 659 tgagtta 665
|||||||
Sbjct: 484 tgagtta 490
>gb|CF481944.1|CF481944 POL1_75_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_75_G03_A002 3', mRNA sequence
Length = 465
Score = 504 bits (254), Expect = e-141
Identities = 311/330 (94%)
Strand = Plus / Plus
Query: 223 tccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctca 282
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct: 1 tccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaaccgatggcgctca 60
Query: 283 tcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtca 342
||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 61 tcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaagccagagccagtga 120
Query: 343 agacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtct 402
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacccatctccgcaacatgatcattgtccctgagatgattggaagcattgttggtgtct 180
Query: 403 acaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttg 462
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 181 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 240
Query: 463 ctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccaccc 522
| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 241 cagagttctccatctcttacaagccagtcaagcacggtaggcccggtatcggtgccaccc 300
Query: 523 actcctcgcggtttattcctctgaaatgag 552
|||| ||||||||||| | |||||||||||
Sbjct: 301 actcgtcgcggtttatccttctgaaatgag 330
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgc 630
||||||| | ||||||||||||||||||||||
Sbjct: 432 ttccagccctagaattcaaagctaagcattgc 463
>gb|BE592729.1|BE592729 WS1_95_F01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 503
Score = 488 bits (246), Expect = e-136
Identities = 339/370 (91%)
Strand = Plus / Plus
Query: 183 gcgcttctcgacatgtccactgacgacctcgtccagctcttccccgcgcgcgccaggaga 242
||||| |||||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 13 gcgctcctcgacatgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcgg 72
Query: 243 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcg 302
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 73 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcg 132
Query: 303 aaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacatg 362
|||||||| || || || ||||||||||||||||| || ||||| || ||||| ||||||
Sbjct: 133 aaaaaggacgcccccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatg 192
Query: 363 atcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaac 422
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 193 atcattgtgcctgagatgattgggagcattgttggtgtctacaacggcaagaccttcaac 252
Query: 423 caggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctcctac 482
||||||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||
Sbjct: 253 caggttgagatcaagccggagatgattggccactacctcgcagagttctccatctcgtac 312
Query: 483 aagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcct 542
||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 313 aagcctgtcaagcacggtaggcccggtatcggtgctacccactcttcgcggttcattcct 372
Query: 543 ctgaaatgag 552
||||| ||||
Sbjct: 373 ctgaagtgag 382
>gb|CF761682.1|CF761682 DSAF1_79_F02.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_79_F02_A011 5', mRNA sequence
Length = 387
Score = 486 bits (245), Expect = e-135
Identities = 335/365 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 22 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 81
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 82 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 141
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 142 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 201
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 202 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 261
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatc 321
Query: 435 aagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaag 494
||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 322 aagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgtcaag 381
Query: 495 cacgg 499
|||||
Sbjct: 382 cacgg 386
>gb|BG159450.1|BG159450 OV2_8_C05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 469
Score = 480 bits (242), Expect = e-133
Identities = 332/362 (91%)
Strand = Plus / Plus
Query: 191 cgacatgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttcca 250
|||||||||||| |||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 1 cgacatgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttcca 60
Query: 251 gaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaagga 310
||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 61 gaggggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaagga 120
Query: 311 tgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgt 370
|| || || ||||||||||||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 121 cgcccccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgt 180
Query: 371 ccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggttga 430
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcctgagatgattgggagcattgttggtgtctacaacggcaagaccttcaaccaggttga 240
Query: 431 gatcaagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccggt 490
||||||||| |||||||| ||||||||||| || |||||||||||||| |||||||| ||
Sbjct: 241 gatcaagccggagatgattggccactacctcgcagagttctccatctcgtacaagcctgt 300
Query: 491 caagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatg 550
||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 301 caagcacggtaggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtg 360
Query: 551 ag 552
||
Sbjct: 361 ag 362
>gb|BF481836.1|BF481836 FM1_22_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 538
Score = 474 bits (239), Expect = e-132
Identities = 299/319 (93%)
Strand = Plus / Plus
Query: 234 gccaggagaaggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactg 293
|||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||
Sbjct: 1 gccaggagaaggttccagaggggtttgaagaggaagccgatggccctcatcaagaagctg 60
Query: 294 cgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctc 353
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 61 cgcaaggcgaaaaaagatgctccagctggtgagaagccagagccagtgaagacccatctt 120
Query: 354 cgtaacatgatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaag 413
|| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 121 cgcaacatgatcattgtccctgagatgattggaagcattgtcggtgtctacaatggcaag 180
Query: 414 accttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctcc 473
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 181 accttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctcc 240
Query: 474 atctcctacaagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcgg 533
|||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 241 atctcctacaagccggtcaagcacggtaggcccggtattggtgccacccactcgtcgcgg 300
Query: 534 tttattcctctgaaatgag 552
||||| |||||||||||||
Sbjct: 301 tttatccctctgaaatgag 319
Score = 101 bits (51), Expect = 1e-019
Identities = 89/99 (89%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaa-ttatgctgttttgttggaagtat 657
||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 ttccagccctagaattcaaagctaagcattgcacaatttatgctgttttgttggaagtat 480
Query: 658 ttgagtta-atcatatctaagctgagttgctacgttctt 695
||||||| ||| |||||||| || | ||||| ||||||
Sbjct: 481 gtgagttatatcgtatctaagatgtgatgctatgttctt 519
>gb|BG356692.1|BG356692 OV2_26_G03.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 470 bits (237), Expect = e-130
Identities = 291/309 (94%)
Strand = Plus / Plus
Query: 244 ggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcga 303
|||||||||||||| |||||||||| || ||||||||||||||||| |||||||||||||
Sbjct: 1 ggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcga 60
Query: 304 aaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacatga 363
|||||| |||||| |||||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct: 61 aaaagggtgctccagctggtgagaagccagagccagtgaagacccatctccgcaacatga 120
Query: 364 tcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaacc 423
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 tcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaacc 180
Query: 424 aggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctcctaca 483
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 181 aggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctcctaca 240
Query: 484 agccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcctc 543
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 241 agccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccctc 300
Query: 544 tgaaatgag 552
|||||||||
Sbjct: 301 tgaaatgag 309
>gb|BG464987.1|BG464987 EM1_34_G02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 319
Score = 436 bits (220), Expect = e-120
Identities = 290/311 (93%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 91 tggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagagg-acgttc 149
|||||||||||||||| || || ||||| |||||||| ||||||||||||||| ||||||
Sbjct: 10 tggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagagggacgttc 69
Query: 150 cgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacgac 209
|||||| |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 70 cgcaag-acagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgac 128
Query: 210 ctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaag 269
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 129 ctcgtccagctcttccccgcgcgcgccaggagaaggttccagaggggtttgaagaggaaa 188
Query: 270 cccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaag 329
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 189 ccgatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctccagctggtgagaag 248
Query: 330 cctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattggaagc 389
|| |||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 249 ccagagccagtgaagacccatctccgcaacntgatcattgtccctgagatgattggaagc 308
Query: 390 attgttggtgt 400
|||||||||||
Sbjct: 309 attgttggtgt 319
>gb|CF759036.1|CF759036 DSAF1_40_B08.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_40_B08_A011 5', mRNA sequence
Length = 512
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 219 ctcttccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcg 278
||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcttccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaagcccatggcg 60
Query: 279 ctcatcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagcca 338
||||||||||| || ||||| ||||||||||| || || || |||||||||||||||||
Sbjct: 61 ctcatcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaagcctgagcct 120
Query: 339 gtcaagacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggt 398
|| ||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 121 gtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggt 180
Query: 399 gtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactac 458
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 181 gtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactac 240
Query: 459 cttgctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgcc 518
|| || |||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct: 241 ctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccggtatcggtgct 300
Query: 519 acccactcctcgcggtttattcctctgaaatgag 552
|||||||| |||||||| ||||||||||| ||||
Sbjct: 301 acccactcttcgcggttcattcctctgaagtgag 334
>gb|AW285360.1|AW285360 LG1_244_D04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 424 bits (214), Expect = e-117
Identities = 301/330 (91%)
Strand = Plus / Plus
Query: 223 tccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctca 282
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaagcccatggcgctca 60
Query: 283 tcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtca 342
||||||| || ||||| ||||||||||| || || || ||||||||||||||||| || |
Sbjct: 61 tcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaagcctgagcctgtga 120
Query: 343 agacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtct 402
|||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 121 agacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggtgtct 180
Query: 403 acaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttg 462
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 181 acaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactacctcg 240
Query: 463 ctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccaccc 522
| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 241 cagagttctccatctcgtacaagcctgtcaagcacggtaggcccggtatcggtgctaccc 300
Query: 523 actcctcgcggtttattcctctgaaatgag 552
|||| |||||||| ||||||||||| ||||
Sbjct: 301 actcttcgcggttcattcctctgaagtgag 330
>gb|CF772381.1|CF772381 DSBF1_34_C10.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_34_C10_A010 3', mRNA sequence
Length = 508
Score = 424 bits (214), Expect = e-117
Identities = 301/330 (91%)
Strand = Plus / Plus
Query: 223 tccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctca 282
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccgcgcgcgcacggcggaggttccagaggggtctgaagaggaagcccatggcgctca 60
Query: 283 tcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtca 342
||||||| || ||||| ||||||||||| || || || ||||||||||||||||| || |
Sbjct: 61 tcaagaagctccgcaaagcgaaaaaggacgcccccgccggtgagaagcctgagcctgtga 120
Query: 343 agacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtct 402
|||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 121 agacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggtgtct 180
Query: 403 acaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttg 462
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 181 acaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactacctcg 240
Query: 463 ctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccaccc 522
| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 241 cagagttctccatctcgtacaagcctgtcaagcacggtaggcccggtatcggtgctaccc 300
Query: 523 actcctcgcggtttattcctctgaaatgag 552
|||| |||||||| ||||||||||| ||||
Sbjct: 301 actcttcgcggttcattcctctgaagtgag 330
>gb|CW141478.1|CW141478 104_532_11136334_116_34935_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136334, DNA
sequence
Length = 665
Score = 394 bits (199), Expect = e-108
Identities = 238/251 (94%)
Strand = Plus / Plus
Query: 302 gaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacat 361
||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 40 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 99
Query: 362 gatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 100 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 159
Query: 422 ccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctccta 481
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 160 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 219
Query: 482 caagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcc 541
|||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 220 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 279
Query: 542 tctgaaatgag 552
|||||||||||
Sbjct: 280 tctgaaatgag 290
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 451
Query: 659 tgagtta 665
|||||||
Sbjct: 452 tgagtta 458
>gb|CW476758.1|CW476758 fsbb001f233m02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 649
Score = 394 bits (199), Expect = e-108
Identities = 238/251 (94%)
Strand = Plus / Plus
Query: 302 gaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacat 361
||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 91 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 150
Query: 362 gatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 151 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 210
Query: 422 ccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctccta 481
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 211 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatctccta 270
Query: 482 caagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcc 541
|||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 271 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 330
Query: 542 tctgaaatgag 552
|||||||||||
Sbjct: 331 tctgaaatgag 341
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 502
Query: 659 tgagtta 665
|||||||
Sbjct: 503 tgagtta 509
>gb|AW565437.1|AW565437 LG1_344_G07.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 387 bits (195), Expect = e-105
Identities = 237/251 (94%)
Strand = Plus / Plus
Query: 302 gaaaaaggatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacat 361
||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 106 gaaaaaggatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacat 165
Query: 362 gatcattgtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 166 gatcattgtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaa 225
Query: 422 ccaggttgagatcaagcctgagatgatcggccactaccttgctgagttctccatctccta 481
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 226 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 285
Query: 482 caagccggtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcc 541
|||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 286 caagccagtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccc 345
Query: 542 tctgaaatgag 552
|||||||||||
Sbjct: 346 tctgaaatgag 356
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 517
Query: 659 tgagtta 665
|||||||
Sbjct: 518 tgagtta 524
>gb|BG053794.1|BG053794 RHIZ2_9_H03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 405
Score = 381 bits (192), Expect = e-104
Identities = 258/280 (92%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 126 aagaagaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 185
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 186 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 245
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 246 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgca 305
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| |||||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 306 cccgctggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 365
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaaga 414
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 366 gagatgattgggagcattgttggtgtctacaacggcaaga 405
>gb|DN552653.1|DN552653 pSHR-RT-MR-H1_A12_C142 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 464
Score = 381 bits (192), Expect = e-104
Identities = 231/244 (94%)
Strand = Plus / Minus
Query: 309 gatgctcctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcatt 368
|||||||| |||||||||||||| |||||||| ||||| |||||||| ||||||||||||
Sbjct: 464 gatgctccagctggtgagaagccagagccagtgaagacccatctccgcaacatgatcatt 405
Query: 369 gtccctgagatgattggaagcattgttggtgtctacaacggcaagaccttcaaccaggtt 428
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 404 gtccctgagatgattggaagcattgttggtgtctacaatggcaagaccttcaaccaggtt 345
Query: 429 gagatcaagcctgagatgatcggccactaccttgctgagttctccatctcctacaagccg 488
|||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 344 gagatcaagcctgagatgattggccactatcttgcagagttctccatctcctacaagcca 285
Query: 489 gtcaagcacggcaggcccggtatcggtgccacccactcctcgcggtttattcctctgaaa 548
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 284 gtcaagcacggtaggcccggtatcggtgccacccactcgtcgcggtttatccctctgaaa 225
Query: 549 tgag 552
||||
Sbjct: 224 tgag 221
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 60
Query: 659 tgagtta 665
|||||||
Sbjct: 59 tgagtta 53
>gb|BE594152.1|BE594152 WS1_103_A01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 400
Score = 379 bits (191), Expect = e-103
Identities = 263/287 (91%)
Strand = Plus / Plus
Query: 135 aagaagaggacgttccgcaagtacagctaccgcggcgtcgacctagatgcgcttctcgac 194
||||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 114 aagaaaaggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgac 173
Query: 195 atgtccactgacgacctcgtccagctcttccccgcgcgcgccaggagaaggttccagagg 254
|||||||| |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 174 atgtccaccgacgacctcgtccagctcttccccgcgcgcgcacggcggaggttccagagg 233
Query: 255 ggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcgaaaaaggatgct 314
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct: 234 ggtctgaagaggaagcccatggcgctcatcaagaagctccgcaaagcgaaaaaggacgcc 293
Query: 315 cctgctggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccct 374
|| || ||||||||||||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 294 cccgccggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcct 353
Query: 375 gagatgattggaagcattgttggtgtctacaacggcaagaccttcaa 421
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 354 gagatgattgggagcattgttggtgtctacaacggcaagaccttcaa 400
>gb|CW476757.1|CW476757 fsbb001f233m02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f233m02, DNA
sequence
Length = 673
Score = 355 bits (179), Expect = 4e-096
Identities = 217/230 (94%)
Strand = Plus / Minus
Query: 323 tgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgat 382
||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 673 tgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccctgagatgat 614
Query: 383 tggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 442
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 613 tggaagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcntga 554
Query: 443 gatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcag 502
|||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 553 gatgattggccactatcttgcagagttctccatctcctacaagccagtcaagcacggtag 494
Query: 503 gcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
|||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 493 gcccggtatcggtgccacccactcgtcgcggtttatccctctgaaatgag 444
Score = 109 bits (55), Expect = 4e-022
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 599 ttccagctcaagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatt 658
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttccagccctagaattcaaagctaagcattgcacaattatgctgttttgttggaagtatg 283
Query: 659 tgagtta 665
|||||||
Sbjct: 282 tgagtta 276
>gb|BQ656042.1|BQ656042 pRC0344 Sorghum halepense rhizome cDNA library Sorghum halepense
cDNA clone pRC0344, mRNA sequence
Length = 578
Score = 349 bits (176), Expect = 3e-094
Identities = 317/364 (87%)
Strand = Plus / Plus
Query: 166 gcggcgtcgacctagatgcgcttctcgacatgtccactgacgacctcgtccagctcttcc 225
||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gcggcgtggacctcgacgcgctcctcgacatgtccaccgacgacctcgtccagctcttcc 60
Query: 226 ccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctcatca 285
|||| |||||| | |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 61 ccgcccgcgcccgcagaaggttccagaggggtctgaagaggaagccgatggctctcatca 120
Query: 286 agaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtcaaga 345
||| ||||| | |||||||||||| || ||||||||||||||||| || || |||| ||
Sbjct: 121 agaggctgcggacggcgaaaaaggaggcacctgctggtgagaagcccgaacctgtcagga 180
Query: 346 cacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtctaca 405
| ||||| || |||||||||||||| || |||||||| || ||| | |||| || ||||
Sbjct: 181 ctcatctgcgcaacatgatcattgtgccagagatgataggtagcgtaattggagtgtaca 240
Query: 406 acggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttgctg 465
| || || || ||||| |||||||||||||||||||||||||| || |||||||||||||
Sbjct: 241 atgggaaaacattcaatcaggttgagatcaagcctgagatgattgggcactaccttgctg 300
Query: 466 agttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccacccact 525
| ||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |
Sbjct: 301 aattctccatcagttacaagcccgtcaagcacggaaggcccggtatcggtgctacccatt 360
Query: 526 cctc 529
||||
Sbjct: 361 cctc 364
>gb|AI724510.1|AI724510 RHIZ1_37_B06.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 420
Score = 309 bits (156), Expect = 2e-082
Identities = 213/232 (91%)
Strand = Plus / Plus
Query: 321 ggtgagaagcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatg 380
||||||||||||||||| || ||||| || ||||| |||||||||||||| |||||||||
Sbjct: 1 ggtgagaagcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatg 60
Query: 381 attggaagcattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcct 440
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgggagcattgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcca 120
Query: 441 gagatgatcggccactaccttgctgagttctccatctcctacaagccggtcaagcacggc 500
|||||||| ||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 121 gagatgattggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggt 180
Query: 501 aggcccggtatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||||||||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 181 aggcccggtatcggtgctacccactcttcgcggttcattcctctgaagtgag 232
>gb|AW565980.1|AW565980 LG1_354_E09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 402
Score = 301 bits (152), Expect = 6e-080
Identities = 206/224 (91%)
Strand = Plus / Plus
Query: 329 gcctgagccagtcaagacacatctccgtaacatgatcattgtccctgagatgattggaag 388
||||||||| || ||||| || ||||| |||||||||||||| |||||||||||||| ||
Sbjct: 1 gcctgagcctgtgaagacccacctccgcaacatgatcattgtgcctgagatgattgggag 60
Query: 389 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgat 448
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 cattgttggtgtctacaacggcaagaccttcaaccaggttgagatcaagccggagatgat 120
Query: 449 cggccactaccttgctgagttctccatctcctacaagccggtcaagcacggcaggcccgg 508
||||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 121 tggccactacctcgcagagttctccatctcgtacaagcctgtcaagcacggtaggcccgg 180
Query: 509 tatcggtgccacccactcctcgcggtttattcctctgaaatgag 552
||||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 181 tatcggtgctacccactcttcgcggttcattcctctgaagtgag 224
>gb|CF772635.1|CF772635 DSBF1_37_E06.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_37_E06_A010 3', mRNA sequence
Length = 527
Score = 299 bits (151), Expect = 2e-079
Identities = 268/307 (87%)
Strand = Plus / Plus
Query: 223 tccccgcgcgcgccaggagaaggttccagaggggtctgaagaggaagcccatggcgctca 282
||||||| |||||| | |||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tccccgcccgcgcccgcagaaggttccagaggggtctgaagaggaagccgatggctctca 60
Query: 283 tcaagaaactgcgcaaggcgaaaaaggatgctcctgctggtgagaagcctgagccagtca 342
|||||| ||||||| |||||||||||| || ||||||||||||||||| ||||| ||||
Sbjct: 61 tcaagaggctgcgcacggcgaaaaaggaggcacctgctggtgagaagcccgagcctgtca 120
Query: 343 agacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtct 402
||| ||||| || |||||||||||||| || |||||||| || ||| | |||| || |
Sbjct: 121 ggactcatctgcgcaacatgatcattgtgccagagatgataggtagcgtaattggagtgt 180
Query: 403 acaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactaccttg 462
|||| || || || |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 181 acaatgggaaaacattcaaccaggttgagatcaagcctgagatgattgggcactaccttg 240
Query: 463 ctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccaccc 522
|||| ||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 241 ctgaattctccatcagttacaagcccgtcaagcacggaaggcccggtatcggtgctaccc 300
Query: 523 actcctc 529
| |||||
Sbjct: 301 attcctc 307
>gb|BG053588.1|BG053588 RHIZ2_11_B10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 389
Score = 276 bits (139), Expect = 3e-072
Identities = 193/211 (91%)
Strand = Plus / Plus
Query: 342 aagacacatctccgtaacatgatcattgtccctgagatgattggaagcattgttggtgtc 401
||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1 aagacccacctccgcaacatgatcattgtgcctgagatgattgggagcattgttggtgtt 60
Query: 402 tacaacggcaagaccttcaaccaggttgagatcaagcctgagatgatcggccactacctt 461
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 61 tacaacggcaagaccttcaaccaggttgagatcaagccggagatgattggccactacctc 120
Query: 462 gctgagttctccatctcctacaagccggtcaagcacggcaggcccggtatcggtgccacc 521
|| ||||||||||| || |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 121 gcagagttctccatttcgtacaagcctgtcaagcacggtaggcccggtatcggtgctacc 180
Query: 522 cactcctcgcggtttattcctctgaaatgag 552
||||| |||||||| ||||||||||| ||||
Sbjct: 181 cactcttcgcggttcattcctctgaagtgag 211
>gb|CL197633.1|CL197633 104_424_10943868_116_32338_036 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943868, DNA
sequence
Length = 642
Score = 236 bits (119), Expect = 3e-060
Identities = 146/155 (94%)
Strand = Plus / Minus
Query: 92 ggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagaggacgttccg 151
||||||||||||||| || || ||||| |||||||| |||||||||||||||||||||||
Sbjct: 525 ggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccg 466
Query: 152 caagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacgacct 211
||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 465 caagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacct 406
Query: 212 cgtccagctcttccccgcgcgcgccaggagaaggt 246
|||||||||||||||||||||||||||||||||||
Sbjct: 405 cgtccagctcttccccgcgcgcgccaggagaaggt 371
Score = 87.7 bits (44), Expect = 2e-015
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 243 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcg 302
||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 294 aggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcg 235
>gb|CW246230.1|CW246230 104_707_11221254_148_35087_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221254, DNA
sequence
Length = 763
Score = 236 bits (119), Expect = 3e-060
Identities = 146/155 (94%)
Strand = Plus / Minus
Query: 92 ggcggacgtcgatgtcgaaccggaggttgccgccggagctcccaagaagaggacgttccg 151
||||||||||||||| || || ||||| |||||||| |||||||||||||||||||||||
Sbjct: 462 ggcggacgtcgatgtggagcctgaggtcgccgccggcgctcccaagaagaggacgttccg 403
Query: 152 caagtacagctaccgcggcgtcgacctagatgcgcttctcgacatgtccactgacgacct 211
||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 402 caagtacagctaccgtggcgtcgacctcgatgcgctgctcgacatgtccaccgacgacct 343
Query: 212 cgtccagctcttccccgcgcgcgccaggagaaggt 246
|||||||||||||||||||||||||||||||||||
Sbjct: 342 cgtccagctcttccccgcgcgcgccaggagaaggt 308
Score = 87.7 bits (44), Expect = 2e-015
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 243 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaaactgcgcaaggcg 302
||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 231 aggttccagaggggtttgaagaggaaaccgatggcgctcatcaagaagctgcgcaaggcg 172
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 222,927
Number of Sequences: 832831
Number of extensions: 222927
Number of successful extensions: 62230
Number of sequences better than 0.5: 95
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61999
Number of HSP's gapped (non-prelim): 174
length of query: 860
length of database: 491,359,669
effective HSP length: 20
effective length of query: 840
effective length of database: 474,703,049
effective search space: 398750561160
effective search space used: 398750561160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)