BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN21e10.yg.2.1
(247 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI166257.1|AI166257 xylem.est.107 Poplar xylem Lambda ZA... 105 8e-022
gb|DT497112.1|DT497112 WS01125.BR_I08 PT-P-FL-A-2 Populus t... 105 8e-022
gb|DT495294.1|DT495294 WS01120.BR_A19 PT-P-FL-A-2 Populus t... 78 2e-013
gb|CF118925.1|CF118925 MTU10CS.P11.C02 Aspen stem cDNA Libr... 42 0.009
gb|AJ776567.1|AJ776567 AJ776567 Populus euphratica root 3-6... 42 0.009
gb|AJ534481.1|AJ534481 AJ534481 Populus euphratica root and... 40 0.037
gb|CA933471.1|CA933471 MTU5CS.P8.E06 Aspen stem cDNA Librar... 40 0.037
gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, compl... 40 0.037
gb|CA924833.1|CA924833 MTU7TL.P10.B12 Aspen leaf cDNA Libra... 38 0.15
gb|CA925020.1|CA925020 MTU7TL.P12.F05 Aspen leaf cDNA Libra... 38 0.15
gb|AJ770272.1|AJ770272 AJ770272 Populus euphratica leaf 3-6... 38 0.15
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloide... 38 0.15
gb|CA925966.1|CA925966 MTU7TL.P8.C10 Aspen leaf cDNA Librar... 36 0.58
gb|CK093110.1|CK093110 G108P12.3pR Populus tension wood cDN... 36 0.58
gb|AJ771160.1|AJ771160 AJ771160 Populus euphratica leaf 3-6... 36 0.58
gb|AJ778682.1|AJ778682 AJ778682 Populus euphratica cambium ... 36 0.58
gb|AJ770012.1|AJ770012 AJ770012 Populus euphratica leaf 3-6... 36 0.58
gb|AJ770249.1|AJ770249 AJ770249 Populus euphratica leaf 3-6... 36 0.58
gb|BP930971.1|BP930971 BP930971 full-length enriched poplar... 36 0.58
gb|BP935568.1|BP935568 BP935568 full-length enriched poplar... 36 0.58
gb|AF133675.1|AF133675 Populus tremula x Populus tremuloide... 36 0.58
gb|CK104567.1|CK104567 I043P25.5pR Populus senescing leaves... 34 2.3
gb|AJ769544.1|AJ769544 AJ769544 Populus euphratica leaf 3-6... 34 2.3
gb|AJ771260.1|AJ771260 AJ771260 Populus euphratica leaf 3-6... 34 2.3
gb|AJ771523.1|AJ771523 AJ771523 Populus euphratica root 3-6... 34 2.3
gb|AJ771762.1|AJ771762 AJ771762 Populus euphratica root 3-6... 34 2.3
gb|AJ772455.1|AJ772455 AJ772455 Populus euphratica shoot in... 34 2.3
gb|AJ769887.1|AJ769887 AJ769887 Populus euphratica leaf 3-6... 34 2.3
gb|AJ770024.1|AJ770024 AJ770024 Populus euphratica leaf 3-6... 34 2.3
gb|AJ770617.1|AJ770617 AJ770617 Populus euphratica leaf 3-6... 34 2.3
gb|BP925807.1|BP925807 BP925807 full-length enriched poplar... 34 2.3
gb|BU813703.1|BU813703 N014A10 Populus bark cDNA library Po... 32 9.1
gb|BU815355.1|BU815355 N040E04 Populus bark cDNA library Po... 32 9.1
gb|BU824000.1|BU824000 UB59CPB03 Populus tremula cambium cD... 32 9.1
gb|BU869103.1|BU869103 M126B01 Populus flower cDNA library ... 32 9.1
gb|BU896673.1|BU896673 X044A12 Populus wood cDNA library Po... 32 9.1
gb|CA926309.1|CA926309 MTU6CR.P13.E06 Aspen root cDNA Libra... 32 9.1
gb|CA926947.1|CA926947 MTU6CR.P3.B04 Aspen root cDNA Librar... 32 9.1
gb|CA928485.1|CA928485 MTU6TR.P3.C04 Aspen root cDNA Librar... 32 9.1
gb|CA933489.1|CA933489 MTU5CS.P8.G03 Aspen stem cDNA Librar... 32 9.1
gb|CA934897.1|CA934897 MTU5TS.P25.E02 Aspen stem cDNA Libra... 32 9.1
gb|CA822067.1|CA822067 R03C08 two-month-old roots from clon... 32 9.1
gb|CK111950.1|CK111950 V060D07 Populus male catkins cDNA li... 32 9.1
gb|AJ769581.1|AJ769581 AJ769581 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771049.1|AJ771049 AJ771049 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771128.1|AJ771128 AJ771128 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771184.1|AJ771184 AJ771184 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771339.1|AJ771339 AJ771339 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771395.1|AJ771395 AJ771395 Populus euphratica leaf 3-6... 32 9.1
gb|AJ771425.1|AJ771425 AJ771425 Populus euphratica root 3-6... 32 9.1
gb|AJ771508.1|AJ771508 AJ771508 Populus euphratica root 3-6... 32 9.1
gb|AJ771544.1|AJ771544 AJ771544 Populus euphratica root 3-6... 32 9.1
gb|AJ771769.1|AJ771769 AJ771769 Populus euphratica root 3-6... 32 9.1
gb|AJ771819.1|AJ771819 AJ771819 Populus euphratica root 3-6... 32 9.1
gb|AJ771886.1|AJ771886 AJ771886 Populus euphratica root 3-6... 32 9.1
gb|AJ771975.1|AJ771975 AJ771975 Populus euphratica root 3-6... 32 9.1
gb|AJ772258.1|AJ772258 AJ772258 Populus euphratica shoot in... 32 9.1
gb|AJ772283.1|AJ772283 AJ772283 Populus euphratica shoot in... 32 9.1
gb|AJ772286.1|AJ772286 AJ772286 Populus euphratica shoot in... 32 9.1
gb|AJ772367.1|AJ772367 AJ772367 Populus euphratica shoot in... 32 9.1
gb|AJ772383.1|AJ772383 AJ772383 Populus euphratica shoot in... 32 9.1
gb|AJ772618.1|AJ772618 AJ772618 Populus euphratica shoot in... 32 9.1
gb|AJ780400.1|AJ780400 AJ780400 Populus euphratica leaf 3-6... 32 9.1
gb|AJ780411.1|AJ780411 AJ780411 Populus euphratica leaf 3-6... 32 9.1
gb|AJ780530.1|AJ780530 AJ780530 Populus euphratica leaf 3-6... 32 9.1
gb|AJ780595.1|AJ780595 AJ780595 Populus euphratica leaf 3-6... 32 9.1
gb|AJ780800.1|AJ780800 AJ780800 Populus euphratica leaf 3-6... 32 9.1
gb|AJ769824.1|AJ769824 AJ769824 Populus euphratica leaf 3-6... 32 9.1
gb|AJ769971.1|AJ769971 AJ769971 Populus euphratica leaf 3-6... 32 9.1
gb|AJ769976.1|AJ769976 AJ769976 Populus euphratica leaf 3-6... 32 9.1
gb|AJ770389.1|AJ770389 AJ770389 Populus euphratica leaf 3-6... 32 9.1
gb|AJ770459.1|AJ770459 AJ770459 Populus euphratica leaf 3-6... 32 9.1
gb|AJ770487.1|AJ770487 AJ770487 Populus euphratica leaf 3-6... 32 9.1
gb|CV131298.1|CV131298 L2P03d04 Populus stem seasonal libra... 32 9.1
gb|CV234471.1|CV234471 WS01215.B21.1_A20 PT-GT-FL-A-3 Popul... 32 9.1
gb|CV238882.1|CV238882 WS0128.B21.1_H20 PT-GT-FL-A-3 Populu... 32 9.1
gb|CV242119.1|CV242119 WS02514.B21.1_D01 PT-MB-N-A-15 Popul... 32 9.1
gb|CX658751.1|CX658751 PO01021G08 Poplar SC cDNA library Po... 32 9.1
gb|BP925486.1|BP925486 BP925486 full-length enriched poplar... 32 9.1
gb|DT475869.1|DT475869 WS0128.BR_H20 PT-GT-FL-A-3 Populus t... 32 9.1
gb|DT478932.1|DT478932 WS02524.BR_D21 PT-MB-N-A-15 Populus ... 32 9.1
gb|DT484025.1|DT484025 WS02524.B21_D21 PT-MB-N-A-15 Populus... 32 9.1
gb|DT487682.1|DT487682 WS02534.B21_F23 PT-MB-N-A-15 Populus... 32 9.1
gb|DT507712.1|DT507712 WS02419.BR_A06 PTxD-ICC-N-A-14 Popul... 32 9.1
gb|DT509916.1|DT509916 WS02425.BR_B13 PTxD-ICC-N-A-14 Popul... 32 9.1
gb|DT510479.1|DT510479 WS02426.BR_K16 PTxD-ICC-N-A-14 Popul... 32 9.1
gb|DT514537.1|DT514537 WS02425.B21_B13 PTxD-ICC-N-A-14 Popu... 32 9.1
>gb|AI166257.1|AI166257 xylem.est.107 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 583
Score = 105 bits (53), Expect = 8e-022
Identities = 179/221 (80%)
Strand = Plus / Minus
Query: 20 ctgaagtagaaaccaattgttgtgtagtaacaagacagcatcctgaagaaatcaaagcga 79
|||||||| ||||||| ||| ||| |||| ||||||||||| | ||| || ||||||||
Sbjct: 246 ctgaagtaaaaaccaactgtggtgaagtagcaagacagcattcggaaaaagtcaaagcgg 187
Query: 80 tgacctagccggtagatgtcacggctcagcgtttgttcgccattgccatttgctatcttt 139
|| || |||||||| || ||||| |||| || || || ||||| ||||| ||||| ||
Sbjct: 186 tgtccaagccggtatatatcacgactcaaagtctgctctccatttccattagctattttg 127
Query: 140 gcctcaaacagagatatttgattgagacctacatcccttcctttgccaacttgcatgtat 199
|||||||||| ||| || |||||||| || ||||| || || || |||||||| || |||
Sbjct: 126 gcctcaaacatagaaatctgattgaggcccacatctctccccttcccaacttgtatatat 67
Query: 200 tcatggtgagtaacattgccttcgcgcaatgtggaattgaa 240
||||| || |||||||| ||||| || | ||| ||||||||
Sbjct: 66 tcatgatgggtaacattcccttcacgtagtgtagaattgaa 26
>gb|DT497112.1|DT497112 WS01125.BR_I08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_I08 5', mRNA sequence
Length = 908
Score = 105 bits (53), Expect = 8e-022
Identities = 179/221 (80%)
Strand = Plus / Minus
Query: 20 ctgaagtagaaaccaattgttgtgtagtaacaagacagcatcctgaagaaatcaaagcga 79
|||||||| ||||||| ||| ||| |||| ||||||||||| | ||| || ||||||||
Sbjct: 774 ctgaagtaaaaaccaactgtggtgaagtagcaagacagcattcggaaaaagtcaaagcgg 715
Query: 80 tgacctagccggtagatgtcacggctcagcgtttgttcgccattgccatttgctatcttt 139
|| || |||||||| || ||||| |||| || || || ||||| ||||| ||||| ||
Sbjct: 714 tgtccaagccggtatatatcacgactcaaagtctgctctccatttccattagctattttg 655
Query: 140 gcctcaaacagagatatttgattgagacctacatcccttcctttgccaacttgcatgtat 199
|||||||||| ||| || |||||||| || ||||| || || || |||||||| || |||
Sbjct: 654 gcctcaaacatagaaatctgattgaggcccacatctctccccttcccaacttgtatatat 595
Query: 200 tcatggtgagtaacattgccttcgcgcaatgtggaattgaa 240
||||| || |||||||| ||||| || | ||| ||||||||
Sbjct: 594 tcatgatgggtaacattcccttcacgtagtgtagaattgaa 554
>gb|DT495294.1|DT495294 WS01120.BR_A19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_A19 5', mRNA sequence
Length = 872
Score = 77.8 bits (39), Expect = 2e-013
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 20 ctgaagtagaaaccaattgttgtgtagtaacaagacagcatcctgaagaaatcaaagcga 79
|||||||| ||||||| ||| ||| |||| ||||||||||| | ||| || ||||||||
Sbjct: 772 ctgaagtaaaaaccaactgtggtgaagtagcaagacagcattcggaaaaagtcaaagcgg 713
Query: 80 tgacctagccggtagatgtcacggctcagcgtttgttcgccattgccatttgctatcttt 139
|| || |||||||| || ||||| |||| || || || ||||| ||||| ||||| ||
Sbjct: 712 tgtccaagccggtatatatcacgactcaaagtctgctctccatttccattagctattttg 653
Query: 140 gcctcaaacagagatatttgattgagacctacatc 174
|||||||||| ||| || |||||||| || |||||
Sbjct: 652 gcctcaaacatagaaatctgattgaggcccacatc 618
>gb|CF118925.1|CF118925 MTU10CS.P11.C02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 786
Score = 42.1 bits (21), Expect = 0.009
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtact 21
|||||||||||||||||||||
Sbjct: 637 gcggccgcccgggcaggtact 657
Score = 40.1 bits (20), Expect = 0.037
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 644 gcggccgcccgggcaggtac 625
>gb|AJ776567.1|AJ776567 AJ776567 Populus euphratica root 3-6 months Populus euphratica
cDNA clone P0000400015B12F1, mRNA sequence
Length = 468
Score = 42.1 bits (21), Expect = 0.009
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 17 gtactgaagtagaaaccaattgttgtgtagtaacaagacagcatc 61
|||||||| |||||||||||||| ||| |||| || |||| ||||
Sbjct: 49 gtactgaaatagaaaccaattgtggtgaagtagcatgacaacatc 5
>gb|AJ534481.1|AJ534481 AJ534481 Populus euphratica root and shoot Populus euphratica cDNA
clone 46, mRNA sequence
Length = 574
Score = 40.1 bits (20), Expect = 0.037
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 498 gcggccgcccgggcaggtac 479
>gb|CA933471.1|CA933471 MTU5CS.P8.E06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 606
Score = 40.1 bits (20), Expect = 0.037
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 270 gcggccgcccgggcaggtac 289
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcag 16
||||||||||||||||
Sbjct: 277 gcggccgcccgggcag 262
>gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, complete sequence
Length = 96953
Score = 40.1 bits (20), Expect = 0.037
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 158 tgattgagacctacatcccttcctttgccaac 189
||||||||||| ||||| | ||||||||||||
Sbjct: 26048 tgattgagaccaacatctcgtcctttgccaac 26017
>gb|CA924833.1|CA924833 MTU7TL.P10.B12 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 569
Score = 38.2 bits (19), Expect = 0.15
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggta 19
|||||||||||||||||||
Sbjct: 547 gcggccgcccgggcaggta 529
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 540 gcggccgcccgggcaggt 557
>gb|CA925020.1|CA925020 MTU7TL.P12.F05 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 568
Score = 38.2 bits (19), Expect = 0.15
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggta 19
|||||||||||||||||||
Sbjct: 547 gcggccgcccgggcaggta 529
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 540 gcggccgcccgggcaggt 557
>gb|AJ770272.1|AJ770272 AJ770272 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100009G03F1, mRNA sequence
Length = 288
Score = 38.2 bits (19), Expect = 0.15
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtactga 23
|||||||||||||||||||
Sbjct: 279 ccgcccgggcaggtactga 261
>gb|AF139835.1|AF139835 Populus tremula x Populus tremuloides F-box containing protein
TIR1 (TIR1) mRNA, complete cds
Length = 2646
Score = 38.2 bits (19), Expect = 0.15
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggta 19
|||||||||||||||||||
Sbjct: 47 gcggccgcccgggcaggta 65
>gb|CA925966.1|CA925966 MTU7TL.P8.C10 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 450
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 302 gcggccgcccgggcaggt 319
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 309 gcggccgcccgggcaggt 292
>gb|CK093110.1|CK093110 G108P12.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G108P12 3', mRNA sequence
Length = 766
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 118 gccattgccatttgctat 135
||||||||||||||||||
Sbjct: 321 gccattgccatttgctat 338
>gb|AJ771160.1|AJ771160 AJ771160 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500002E07F1, mRNA sequence
Length = 202
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtactg 22
||||||||||||||||||
Sbjct: 198 ccgcccgggcaggtactg 181
>gb|AJ778682.1|AJ778682 AJ778682 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600004F02F1, mRNA sequence
Length = 135
Score = 36.2 bits (18), Expect = 0.58
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 98 tcacggctcagcgtttgttcgccattgccatttgctatctttgcctcaaa 147
|||||||| || || || || ||||| |||||||| | ||||||||||||
Sbjct: 85 tcacggctaagtgtctgctctccattcccatttgcaacctttgcctcaaa 36
>gb|AJ770012.1|AJ770012 AJ770012 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100005G04F1, mRNA sequence
Length = 228
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 5 ccgcccgggcaggtactg 22
||||||||||||||||||
Sbjct: 1 ccgcccgggcaggtactg 18
>gb|AJ770249.1|AJ770249 AJ770249 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100009D06F1, mRNA sequence
Length = 300
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtactg 22
||||||||||||||||||
Sbjct: 294 ccgcccgggcaggtactg 277
>gb|BP930971.1|BP930971 BP930971 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-017_A23.r 3', mRNA sequence
Length = 606
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 118 gccattgccatttgctat 135
||||||||||||||||||
Sbjct: 308 gccattgccatttgctat 325
>gb|BP935568.1|BP935568 BP935568 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-078_G06.r 3', mRNA sequence
Length = 541
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 118 gccattgccatttgctat 135
||||||||||||||||||
Sbjct: 309 gccattgccatttgctat 326
>gb|AF133675.1|AF133675 Populus tremula x Populus tremuloides retinoblastoma-related
protein 1 (RB1) mRNA, complete cds
Length = 3572
Score = 36.2 bits (18), Expect = 0.58
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggt 18
||||||||||||||||||
Sbjct: 21 gcggccgcccgggcaggt 38
>gb|CK104567.1|CK104567 I043P25.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I043P25 5', mRNA sequence
Length = 158
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 149 agagatatttgattgag 165
|||||||||||||||||
Sbjct: 17 agagatatttgattgag 1
>gb|AJ769544.1|AJ769544 AJ769544 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000009B10F1, mRNA sequence
Length = 417
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 417 ccgcccgggcaggtact 401
>gb|AJ771260.1|AJ771260 AJ771260 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500004A09F1, mRNA sequence
Length = 285
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtactg 22
|||||||||||||||||
Sbjct: 283 cgcccgggcaggtactg 267
>gb|AJ771523.1|AJ771523 AJ771523 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600002C05F1, mRNA sequence
Length = 221
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 217 ccgcccgggcaggtact 201
>gb|AJ771762.1|AJ771762 AJ771762 Populus euphratica root 3-6 months Populus euphratica
cDNA clone P0001600006G05F1, mRNA sequence
Length = 254
Score = 34.2 bits (17), Expect = 2.3
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtact 21
|||| ||||||||||||||||
Sbjct: 1 gcggtcgcccgggcaggtact 21
>gb|AJ772455.1|AJ772455 AJ772455 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006G06F1, mRNA sequence
Length = 280
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 280 ccgcccgggcaggtact 264
>gb|AJ769887.1|AJ769887 AJ769887 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100004A10F1, mRNA sequence
Length = 423
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 407 ccgcccgggcaggtact 391
>gb|AJ770024.1|AJ770024 AJ770024 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100005H05F1, mRNA sequence
Length = 492
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtactg 22
|||||||||||||||||
Sbjct: 492 cgcccgggcaggtactg 476
>gb|AJ770617.1|AJ770617 AJ770617 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100014F07F1, mRNA sequence
Length = 372
Score = 34.2 bits (17), Expect = 2.3
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtact 21
|||||||||||||||||
Sbjct: 372 ccgcccgggcaggtact 356
>gb|BP925807.1|BP925807 BP925807 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_P13.f 5', mRNA sequence
Length = 365
Score = 34.2 bits (17), Expect = 2.3
Identities = 23/25 (92%)
Strand = Plus / Minus
Query: 51 aagacagcatcctgaagaaatcaaa 75
|||| ||||| ||||||||||||||
Sbjct: 145 aagaaagcattctgaagaaatcaaa 121
>gb|BU813703.1|BU813703 N014A10 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 685
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 175 ccttcctttgccaact 190
||||||||||||||||
Sbjct: 550 ccttcctttgccaact 535
>gb|BU815355.1|BU815355 N040E04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 554
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 175 ccttcctttgccaact 190
||||||||||||||||
Sbjct: 157 ccttcctttgccaact 142
>gb|BU824000.1|BU824000 UB59CPB03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 381
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 230 tttgctatctttgcct 215
>gb|BU869103.1|BU869103 M126B01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 478
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 47 taacaagacagcatcctgaa 66
||||||||||||| ||||||
Sbjct: 227 taacaagacagcaacctgaa 208
>gb|BU896673.1|BU896673 X044A12 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 474
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 229 tgtggaattgaatcct 244
||||||||||||||||
Sbjct: 424 tgtggaattgaatcct 439
>gb|CA926309.1|CA926309 MTU6CR.P13.E06 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 647
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 175 ccttcctttgccaact 190
||||||||||||||||
Sbjct: 82 ccttcctttgccaact 97
>gb|CA926947.1|CA926947 MTU6CR.P3.B04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 691
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 175 ccttcctttgccaact 190
||||||||||||||||
Sbjct: 82 ccttcctttgccaact 97
>gb|CA928485.1|CA928485 MTU6TR.P3.C04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 712
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 56 tttgctatctttgcct 41
>gb|CA933489.1|CA933489 MTU5CS.P8.G03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 683
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 175 ccttcctttgccaact 190
||||||||||||||||
Sbjct: 82 ccttcctttgccaact 97
>gb|CA934897.1|CA934897 MTU5TS.P25.E02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 386
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 3 ggccgcccgggcaggt 18
||||||||||||||||
Sbjct: 358 ggccgcccgggcaggt 343
>gb|CA822067.1|CA822067 R03C08 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 383
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 229 tgtggaattgaatcct 244
||||||||||||||||
Sbjct: 300 tgtggaattgaatcct 315
>gb|CK111950.1|CK111950 V060D07 Populus male catkins cDNA library Populus trichocarpa cDNA
clone V060D07 5', mRNA sequence
Length = 851
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 216 tttgctatctttgcct 201
>gb|AJ769581.1|AJ769581 AJ769581 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000010A05F1, mRNA sequence
Length = 175
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 161 ccgcccgggcaggtac 146
>gb|AJ771049.1|AJ771049 AJ771049 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500001B10F1, mRNA sequence
Length = 279
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 279 cgcccgggcaggtact 264
>gb|AJ771128.1|AJ771128 AJ771128 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500002B06F1, mRNA sequence
Length = 415
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 415 cgcccgggcaggtact 400
>gb|AJ771184.1|AJ771184 AJ771184 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500002H04F1, mRNA sequence
Length = 431
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 431 ccgcccgggcaggtac 416
>gb|AJ771339.1|AJ771339 AJ771339 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500005E01F1, mRNA sequence
Length = 292
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 240 ccgcccgggcaggtac 225
>gb|AJ771395.1|AJ771395 AJ771395 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001500006E01F1, mRNA sequence
Length = 461
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 457 ccgcccgggcaggtac 442
>gb|AJ771425.1|AJ771425 AJ771425 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600001A08F1, mRNA sequence
Length = 159
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 159 cgcccgggcaggtact 144
>gb|AJ771508.1|AJ771508 AJ771508 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600002A12F1, mRNA sequence
Length = 330
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 310 ccgcccgggcaggtac 295
>gb|AJ771544.1|AJ771544 AJ771544 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600002E06F1, mRNA sequence
Length = 180
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 132 ccgcccgggcaggtac 117
>gb|AJ771769.1|AJ771769 AJ771769 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600007D01F1, mRNA sequence
Length = 265
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 256 ccgcccgggcaggtac 241
>gb|AJ771819.1|AJ771819 AJ771819 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600010E12F1, mRNA sequence
Length = 523
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 522 ccgcccgggcaggtac 507
>gb|AJ771886.1|AJ771886 AJ771886 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600012B07F2, mRNA sequence
Length = 459
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 459 cgcccgggcaggtact 444
>gb|AJ771975.1|AJ771975 AJ771975 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600012H09F1, mRNA sequence
Length = 263
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
|||||||||||| |||||||
Sbjct: 263 gcggccgcccggccaggtac 244
>gb|AJ772258.1|AJ772258 AJ772258 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700003F12F1, mRNA sequence
Length = 256
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 252 ccgcccgggcaggtac 237
>gb|AJ772283.1|AJ772283 AJ772283 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700004C02F1, mRNA sequence
Length = 332
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 322 cgcccgggcaggtact 307
>gb|AJ772286.1|AJ772286 AJ772286 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700004C09F1, mRNA sequence
Length = 203
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 199 ccgcccgggcaggtac 184
>gb|AJ772367.1|AJ772367 AJ772367 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700005D03F1, mRNA sequence
Length = 180
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 180 cgcccgggcaggtact 165
>gb|AJ772383.1|AJ772383 AJ772383 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700005F03F1, mRNA sequence
Length = 330
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 330 cgcccgggcaggtact 315
>gb|AJ772618.1|AJ772618 AJ772618 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700009D03F1, mRNA sequence
Length = 209
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 8 cccgggcaggtactga 23
||||||||||||||||
Sbjct: 209 cccgggcaggtactga 194
>gb|AJ780400.1|AJ780400 AJ780400 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900007B02F1, mRNA sequence
Length = 137
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtactgaag 25
||||||||||||||| ||||
Sbjct: 137 cgcccgggcaggtacagaag 118
>gb|AJ780411.1|AJ780411 AJ780411 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900007E12F1, mRNA sequence
Length = 152
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 152 cgcccgggcaggtact 137
>gb|AJ780530.1|AJ780530 AJ780530 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900009C08F1, mRNA sequence
Length = 259
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 259 ccgcccgggcaggtac 244
>gb|AJ780595.1|AJ780595 AJ780595 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900010B03F1, mRNA sequence
Length = 309
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||| ||||||||||||||
Sbjct: 309 gcggctgcccgggcaggtac 290
>gb|AJ780800.1|AJ780800 AJ780800 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900013F01F1, mRNA sequence
Length = 400
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 400 cgcccgggcaggtact 385
>gb|AJ769824.1|AJ769824 AJ769824 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100003B07F1, mRNA sequence
Length = 278
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtactg 22
||||||||||||||||
Sbjct: 260 gcccgggcaggtactg 275
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtactg 22
||||||||||||||||
Sbjct: 267 gcccgggcaggtactg 252
>gb|AJ769971.1|AJ769971 AJ769971 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100005C01F1, mRNA sequence
Length = 414
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 ccgcccgggcaggtac 20
||||||||||||||||
Sbjct: 360 ccgcccgggcaggtac 345
>gb|AJ769976.1|AJ769976 AJ769976 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100005C06F1, mRNA sequence
Length = 343
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 343 cgcccgggcaggtact 328
>gb|AJ770389.1|AJ770389 AJ770389 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100011C05F1, mRNA sequence
Length = 414
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
|||| |||||||||||||||
Sbjct: 15 gcggtcgcccgggcaggtac 34
>gb|AJ770459.1|AJ770459 AJ770459 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100012D03F1, mRNA sequence
Length = 257
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 257 cgcccgggcaggtact 242
>gb|AJ770487.1|AJ770487 AJ770487 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100012F11F1, mRNA sequence
Length = 146
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtact 21
||||||||||||||||
Sbjct: 146 cgcccgggcaggtact 131
>gb|CV131298.1|CV131298 L2P03d04 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 853
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 267 tttgctatctttgcct 252
>gb|CV234471.1|CV234471 WS01215.B21.1_A20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_A20 3', mRNA sequence
Length = 594
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 401 tttgctatctttgcct 416
>gb|CV238882.1|CV238882 WS0128.B21.1_H20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_H20 3', mRNA sequence
Length = 595
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 410 tttgctatctttgcct 425
>gb|CV242119.1|CV242119 WS02514.B21.1_D01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_D01 3', mRNA sequence
Length = 677
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 449 tttgctatctttgcct 464
>gb|CX658751.1|CX658751 PO01021G08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01021G08 5', mRNA sequence
Length = 682
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 47 taacaagacagcatcctgaa 66
|||||||||||||| |||||
Sbjct: 352 taacaagacagcattctgaa 333
>gb|BP925486.1|BP925486 BP925486 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-047_B14.f 5', mRNA sequence
Length = 514
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 16 ggtactgaagtagaaa 31
||||||||||||||||
Sbjct: 349 ggtactgaagtagaaa 364
>gb|DT475869.1|DT475869 WS0128.BR_H20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_H20 5', mRNA sequence
Length = 334
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 205 tttgctatctttgcct 190
>gb|DT478932.1|DT478932 WS02524.BR_D21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_D21 5', mRNA sequence
Length = 740
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 292 tttgctatctttgcct 277
>gb|DT484025.1|DT484025 WS02524.B21_D21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_D21 3', mRNA sequence
Length = 740
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 449 tttgctatctttgcct 464
>gb|DT487682.1|DT487682 WS02534.B21_F23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_F23 3', mRNA sequence
Length = 677
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 449 tttgctatctttgcct 464
>gb|DT507712.1|DT507712 WS02419.BR_A06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_A06 5', mRNA sequence
Length = 895
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 128 tttgctatctttgcct 143
||||||||||||||||
Sbjct: 210 tttgctatctttgcct 195
>gb|DT509916.1|DT509916 WS02425.BR_B13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_B13 5', mRNA sequence
Length = 757
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 47 taacaagacagcatcctgaa 66
||||||||||||| ||||||
Sbjct: 588 taacaagacagcaacctgaa 569
>gb|DT510479.1|DT510479 WS02426.BR_K16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_K16 5', mRNA sequence
Length = 824
Score = 32.2 bits (16), Expect = 9.1
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 51 aagacagcatcctgaa 66
||||||||||||||||
Sbjct: 715 aagacagcatcctgaa 700
>gb|DT514537.1|DT514537 WS02425.B21_B13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_B13 3', mRNA sequence
Length = 757
Score = 32.2 bits (16), Expect = 9.1
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 47 taacaagacagcatcctgaa 66
||||||||||||| ||||||
Sbjct: 170 taacaagacagcaacctgaa 189
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 31,021
Number of Sequences: 369679
Number of extensions: 31021
Number of successful extensions: 8316
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8217
Number of HSP's gapped (non-prelim): 99
length of query: 247
length of database: 203,408,664
effective HSP length: 18
effective length of query: 229
effective length of database: 196,754,442
effective search space: 45056767218
effective search space used: 45056767218
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)