BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG38e04.yg.2.1
(690 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF232861.1|CF232861 PtaJXO0016F7F0711 Poplar cDNA librar... 224 3e-057
gb|AI166267.1|AI166267 xylem.est.116 Poplar xylem Lambda ZA... 157 7e-037
gb|BU896476.1|BU896476 X041D11 Populus wood cDNA library Po... 151 4e-035
gb|AJ776567.1|AJ776567 AJ776567 Populus euphratica root 3-6... 143 1e-032
gb|AJ772088.1|AJ772088 AJ772088 Populus euphratica shoot in... 88 5e-016
gb|AI166257.1|AI166257 xylem.est.107 Poplar xylem Lambda ZA... 72 3e-011
gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA librar... 70 1e-010
gb|CN518891.1|CN518891 GQ0102.B3_E01 GQ010 Populus trichoca... 66 2e-009
gb|CK099645.1|CK099645 A079P12.5pR Hybrid aspen plasmid lib... 60 1e-007
gb|CK116341.1|CK116341 B010P30 Hybrid aspen plasmid library... 60 1e-007
gb|AI164628.1|AI164628 A066P21U Hybrid aspen plasmid librar... 50 1e-004
gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Popul... 50 1e-004
gb|CK099401.1|CK099401 A066P21.5pR Hybrid aspen plasmid lib... 48 4e-004
gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, compl... 48 4e-004
gb|AJ770061.1|AJ770061 AJ770061 Populus euphratica leaf 3-6... 44 0.007
gb|AI165231.1|AI165231 A079P12U Hybrid aspen plasmid librar... 40 0.11
gb|BU820590.1|BU820590 UB11CPH01 Populus tremula cambium cD... 38 0.43
gb|BU867555.1|BU867555 M101F06 Populus flower cDNA library ... 38 0.43
gb|BU867560.1|BU867560 M101F11 Populus flower cDNA library ... 38 0.43
gb|BU867585.1|BU867585 M102A01 Populus flower cDNA library ... 38 0.43
gb|BU867772.1|BU867772 M104B04 Populus flower cDNA library ... 38 0.43
gb|BU867832.1|BU867832 M104H05 Populus flower cDNA library ... 38 0.43
gb|BU867882.1|BU867882 M105E04 Populus flower cDNA library ... 38 0.43
gb|BU867930.1|BU867930 M106A10 Populus flower cDNA library ... 38 0.43
gb|BU868144.1|BU868144 M111H10 Populus flower cDNA library ... 38 0.43
gb|BU868191.1|BU868191 M112C11 Populus flower cDNA library ... 38 0.43
gb|BU868275.1|BU868275 M113E01 Populus flower cDNA library ... 38 0.43
gb|BU868490.1|BU868490 M116E02 Populus flower cDNA library ... 38 0.43
gb|BU868527.1|BU868527 M117A01 Populus flower cDNA library ... 38 0.43
gb|BU868552.1|BU868552 M117C05 Populus flower cDNA library ... 38 0.43
gb|BU868678.1|BU868678 M118G11 Populus flower cDNA library ... 38 0.43
gb|BU868699.1|BU868699 M120B01 Populus flower cDNA library ... 38 0.43
gb|BU868742.1|BU868742 M120F01 Populus flower cDNA library ... 38 0.43
gb|BU868974.1|BU868974 M124D10 Populus flower cDNA library ... 38 0.43
gb|BU869238.1|BU869238 M127G03 Populus flower cDNA library ... 38 0.43
gb|BU869358.1|BU869358 M129B07 Populus flower cDNA library ... 38 0.43
gb|BU875201.1|BU875201 V003E05 Populus flower cDNA library ... 38 0.43
gb|BU875578.1|BU875578 V008G08 Populus flower cDNA library ... 38 0.43
gb|BU876047.1|BU876047 V015D10 Populus flower cDNA library ... 38 0.43
gb|BU877162.1|BU877162 V030bG02 Populus flower cDNA library... 38 0.43
gb|BU877301.1|BU877301 V032D08 Populus flower cDNA library ... 38 0.43
gb|BU879773.1|BU879773 UM37TC07 Populus flower cDNA library... 38 0.43
gb|BU879938.1|BU879938 UM39TD11 Populus flower cDNA library... 38 0.43
gb|BU879946.1|BU879946 UM39TE07 Populus flower cDNA library... 38 0.43
gb|BU880045.1|BU880045 UM40TG07 Populus flower cDNA library... 38 0.43
gb|BU880046.1|BU880046 UM40TG09 Populus flower cDNA library... 38 0.43
gb|BU880112.1|BU880112 UM41TF02 Populus flower cDNA library... 38 0.43
gb|BU880282.1|BU880282 UM43TH02 Populus flower cDNA library... 38 0.43
gb|BU880322.1|BU880322 UM44TD07 Populus flower cDNA library... 38 0.43
gb|BU880380.1|BU880380 UM45TC02 Populus flower cDNA library... 38 0.43
gb|BU880550.1|BU880550 UM51TE10 Populus flower cDNA library... 38 0.43
gb|BU880556.1|BU880556 UM51TF04 Populus flower cDNA library... 38 0.43
gb|BU881011.1|BU881011 UM57TF07 Populus flower cDNA library... 38 0.43
gb|BU881063.1|BU881063 UM58TC03 Populus flower cDNA library... 38 0.43
gb|BU881074.1|BU881074 UM58TD02 Populus flower cDNA library... 38 0.43
gb|BU881230.1|BU881230 UM60TB12 Populus flower cDNA library... 38 0.43
gb|BU881249.1|BU881249 UM60TD10 Populus flower cDNA library... 38 0.43
gb|BU881299.1|BU881299 UM61TA05 Populus flower cDNA library... 38 0.43
gb|BU881408.1|BU881408 UM62TC08 Populus flower cDNA library... 38 0.43
gb|BU881418.1|BU881418 UM62TD07 Populus flower cDNA library... 38 0.43
gb|BU881423.1|BU881423 UM62TE02 Populus flower cDNA library... 38 0.43
gb|BU881481.1|BU881481 UM63TC10 Populus flower cDNA library... 38 0.43
gb|BU881607.1|BU881607 UM65TA12 Populus flower cDNA library... 38 0.43
gb|BU881732.1|BU881732 UM66TG05 Populus flower cDNA library... 38 0.43
gb|BU881777.1|BU881777 UM67TD05 Populus flower cDNA library... 38 0.43
gb|BU881827.1|BU881827 UM68TA06 Populus flower cDNA library... 38 0.43
gb|BU881980.1|BU881980 UM70TA12 Populus flower cDNA library... 38 0.43
gb|BU882095.1|BU882095 UM72TE06 Populus flower cDNA library... 38 0.43
gb|BU882156.1|BU882156 UM73TD03 Populus flower cDNA library... 38 0.43
gb|BU882440.1|BU882440 UM77TA06 Populus flower cDNA library... 38 0.43
gb|BU882488.1|BU882488 UM77TE10 Populus flower cDNA library... 38 0.43
gb|BU882681.1|BU882681 UM80TH01 Populus flower cDNA library... 38 0.43
gb|BU882751.1|BU882751 UM81TG05 Populus flower cDNA library... 38 0.43
gb|BU882758.1|BU882758 UM81TH02 Populus flower cDNA library... 38 0.43
gb|BU882898.1|BU882898 UM83TG02 Populus flower cDNA library... 38 0.43
gb|BU883085.1|BU883085 UM86TB08 Populus flower cDNA library... 38 0.43
gb|BU883155.1|BU883155 UM87TA03 Populus flower cDNA library... 38 0.43
gb|BU883249.1|BU883249 UM88TB05 Populus flower cDNA library... 38 0.43
gb|BU883599.1|BU883599 UM93TG02 Populus flower cDNA library... 38 0.43
gb|BU883690.1|BU883690 UM98TB01 Populus flower cDNA library... 38 0.43
gb|BU883699.1|BU883699 UM98TC06 Populus flower cDNA library... 38 0.43
gb|CA822513.1|CA822513 R09C02 two-month-old roots from clon... 38 0.43
gb|CA822532.1|CA822532 R09E02 two-month-old roots from clon... 38 0.43
gb|CA822802.1|CA822802 R14A11 two-month-old roots from clon... 38 0.43
gb|CA823465.1|CA823465 R26E10 two-month-old roots from clon... 38 0.43
gb|CA823595.1|CA823595 R28F05 two-month-old roots from clon... 38 0.43
gb|CA823767.1|CA823767 R31A11 two-month-old roots from clon... 38 0.43
gb|CA823805.1|CA823805 R31F05 two-month-old roots from clon... 38 0.43
gb|CA824632.1|CA824632 R45G12 two-month-old roots from clon... 38 0.43
gb|CA825639.1|CA825639 R63G09 two-month-old roots from clon... 38 0.43
gb|CA826263.1|CA826263 R75D06 two-month-old roots from clon... 38 0.43
gb|CA826430.1|CA826430 R78A06 two-month-old roots from clon... 38 0.43
gb|CB833324.1|CB833324 R01E03 two-month-old roots from clon... 38 0.43
gb|CK114067.1|CK114067 V030G02 Populus male catkins cDNA li... 38 0.43
gb|CN193178.1|CN193178 PtdH601 hybrid poplar systemically w... 38 0.43
gb|CN521723.1|CN521723 GQ0114.B3_P22 GQ011 Populus trichoca... 38 0.43
gb|CK318220.1|CK318220 B9P06g11 Populus stem seasonal libra... 38 0.43
gb|CK319736.1|CK319736 L1P01d07 Populus stem seasonal libra... 38 0.43
gb|CK319742.1|CK319742 L1P01e11 Populus stem seasonal libra... 38 0.43
gb|CK319831.1|CK319831 L1P04h08 Populus stem seasonal libra... 38 0.43
gb|CK320033.1|CK320033 L2P02c12 Populus stem seasonal libra... 38 0.43
gb|CK320184.1|CK320184 L2P08c07 Populus stem seasonal libra... 38 0.43
gb|CK320228.1|CK320228 L2P09h01 Populus stem seasonal libra... 38 0.43
gb|CK320371.1|CK320371 L3P04e09 Populus stem seasonal libra... 38 0.43
gb|CK320531.1|CK320531 L4P02a10 Populus stem seasonal libra... 38 0.43
gb|CK320545.1|CK320545 L4P02e12 Populus stem seasonal libra... 38 0.43
gb|AJ767200.1|AJ767200 AJ767200 Populus euphratica leaf adu... 38 0.43
gb|AJ767545.1|AJ767545 AJ767545 Populus euphratica leaf adu... 38 0.43
gb|AJ767751.1|AJ767751 AJ767751 Populus euphratica leaf adu... 38 0.43
gb|AJ768214.1|AJ768214 AJ768214 Populus euphratica leaf adu... 38 0.43
gb|AJ768405.1|AJ768405 AJ768405 Populus euphratica leaf adu... 38 0.43
gb|AJ768437.1|AJ768437 AJ768437 Populus euphratica leaf adu... 38 0.43
gb|AJ768477.1|AJ768477 AJ768477 Populus euphratica leaf adu... 38 0.43
gb|AJ768843.1|AJ768843 AJ768843 Populus euphratica leaf adu... 38 0.43
gb|AJ771283.1|AJ771283 AJ771283 Populus euphratica leaf 3-6... 38 0.43
gb|AJ772899.1|AJ772899 AJ772899 Populus euphratica leaf 3-6... 38 0.43
gb|AJ772942.1|AJ772942 AJ772942 Populus euphratica leaf 3-6... 38 0.43
gb|AJ772954.1|AJ772954 AJ772954 Populus euphratica leaf 3-6... 38 0.43
gb|AJ773028.1|AJ773028 AJ773028 Populus euphratica leaf 3-6... 38 0.43
gb|AJ773037.1|AJ773037 AJ773037 Populus euphratica leaf 3-6... 38 0.43
gb|AJ773245.1|AJ773245 AJ773245 Populus euphratica leaf 3-6... 38 0.43
gb|AJ773316.1|AJ773316 AJ773316 Populus euphratica leaf 3-6... 38 0.43
gb|AJ773425.1|AJ773425 AJ773425 Populus euphratica shoot 3-... 38 0.43
gb|AJ773947.1|AJ773947 AJ773947 Populus euphratica shoot 3-... 38 0.43
gb|AJ774013.1|AJ774013 AJ774013 Populus euphratica shoot 3-... 38 0.43
gb|AJ774107.1|AJ774107 AJ774107 Populus euphratica shoot 3-... 38 0.43
gb|AJ774313.1|AJ774313 AJ774313 Populus euphratica shoot 3-... 38 0.43
gb|AJ774879.1|AJ774879 AJ774879 Populus euphratica shoot 3-... 38 0.43
gb|AJ775401.1|AJ775401 AJ775401 Populus euphratica shoot 3-... 38 0.43
gb|AJ775428.1|AJ775428 AJ775428 Populus euphratica shoot 3-... 38 0.43
gb|AJ778759.1|AJ778759 AJ778759 Populus euphratica cambium ... 38 0.43
gb|AJ779060.1|AJ779060 AJ779060 Populus euphratica cambium ... 38 0.43
gb|AJ779207.1|AJ779207 AJ779207 Populus euphratica leaf 3-6... 38 0.43
gb|AJ779251.1|AJ779251 AJ779251 Populus euphratica leaf 3-6... 38 0.43
gb|AJ779269.1|AJ779269 AJ779269 Populus euphratica leaf 3-6... 38 0.43
gb|AJ779456.1|AJ779456 AJ779456 Populus euphratica root 3-6... 38 0.43
gb|AJ779505.1|AJ779505 AJ779505 Populus euphratica root 3-6... 38 0.43
gb|AJ779659.1|AJ779659 AJ779659 Populus euphratica root 3-6... 38 0.43
gb|AJ779731.1|AJ779731 AJ779731 Populus euphratica root 3-6... 38 0.43
gb|AJ779734.1|AJ779734 AJ779734 Populus euphratica root 3-6... 38 0.43
gb|AJ779810.1|AJ779810 AJ779810 Populus euphratica root 3-6... 38 0.43
gb|AJ779922.1|AJ779922 AJ779922 Populus euphratica root 3-6... 38 0.43
gb|AJ779988.1|AJ779988 AJ779988 Populus euphratica root 3-6... 38 0.43
gb|AJ780455.1|AJ780455 AJ780455 Populus euphratica leaf 3-6... 38 0.43
gb|CV131133.1|CV131133 L1P07c03 Populus stem seasonal libra... 38 0.43
gb|CV131206.1|CV131206 L1P08h11 Populus stem seasonal libra... 38 0.43
gb|CV131290.1|CV131290 L2P03c04 Populus stem seasonal libra... 38 0.43
gb|CV131391.1|CV131391 L2P05a07 Populus stem seasonal libra... 38 0.43
gb|CV131406.1|CV131406 L2P05d05 Populus stem seasonal libra... 38 0.43
gb|CV131472.1|CV131472 L2P07d11 Populus stem seasonal libra... 38 0.43
gb|CV131578.1|CV131578 L3P01b11 Populus stem seasonal libra... 38 0.43
gb|CV131941.1|CV131941 L4P04a07 Populus stem seasonal libra... 38 0.43
gb|CV131989.1|CV131989 L4P10g04 Populus stem seasonal libra... 38 0.43
gb|CV225715.1|CV225715 WS0162.B21_D04 PT-DX-A-7 Populus tri... 38 0.43
gb|CV235404.1|CV235404 WS01218.B21_P21 PT-GT-FL-A-3 Populus... 38 0.43
gb|CV236773.1|CV236773 WS01225.B21.1_G09 PT-GT-FL-A-3 Popul... 38 0.43
gb|CV237504.1|CV237504 WS0123.B21_A11 PT-GT-FL-A-3 Populus ... 38 0.43
gb|CV239135.1|CV239135 WS0231.B21_G19 PT-MB-A-13 Populus tr... 38 0.43
gb|CV239364.1|CV239364 WS0232.B21_C20 PT-MB-A-13 Populus tr... 38 0.43
gb|CV239767.1|CV239767 WS0233.B21_G18 PT-MB-A-13 Populus tr... 38 0.43
gb|CV239977.1|CV239977 WS0234.B21_A17 PT-MB-A-13 Populus tr... 38 0.43
gb|CV240010.1|CV240010 WS0234.B21_C05 PT-MB-A-13 Populus tr... 38 0.43
gb|CV240084.1|CV240084 WS0234.B21_F15 PT-MB-A-13 Populus tr... 38 0.43
gb|CV240124.1|CV240124 WS0234.B21_H19 PT-MB-A-13 Populus tr... 38 0.43
gb|CV240229.1|CV240229 WS0234.B21_M22 PT-MB-A-13 Populus tr... 38 0.43
gb|CV245266.1|CV245266 WS0256.B21_O21 PT-MB-N-A-15 Populus ... 38 0.43
gb|CV253745.1|CV253745 WS0222.B21_N19 PTxD-ICC-A-12 Populus... 38 0.43
gb|CV258927.1|CV258927 WS0201.B21_O05 PTxN-IB-N-A-11 Populu... 38 0.43
gb|CV264153.1|CV264153 WS02023.B21_M04 PTxN-IB-N-A-11 Popul... 38 0.43
gb|CV271240.1|CV271240 WS0154.B21_C16 PTxN-IB-A-6 Populus t... 38 0.43
gb|CV276505.1|CV276505 WS0141.B21_A09 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV277104.1|CV277104 WS0142.B21_K15 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV277375.1|CV277375 WS0143.B21_G18 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV277568.1|CV277568 WS0143.B21_P03 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV278152.1|CV278152 WS0145.B21_J19 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV278239.1|CV278239 WS0145.B21_N15 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV278420.1|CV278420 WS0146.B21_F15 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV278896.1|CV278896 WS0147.B21_M10 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV278977.1|CV278977 WS0148.B21_A04 PTxD-IL-A-5 Populus t... 38 0.43
gb|CV279488.1|CV279488 WS0131.B21_P23 PTxD-IL-FL-A-4 Populu... 38 0.43
gb|CV279568.1|CV279568 WS0132.B21_F09 PTxD-IL-FL-A-4 Populu... 38 0.43
gb|CV280196.1|CV280196 WS0135.B21_E13 PTxD-IL-FL-A-4 Populu... 38 0.43
gb|CV281220.1|CV281220 WS0181.B21_F12 PTxD-IL-N-A-9 Populus... 38 0.43
gb|CV281777.1|CV281777 WS0182.B21_N10 PTxD-IL-N-A-9 Populus... 38 0.43
gb|CV282698.1|CV282698 WS0185.B21_F18 PTxD-IL-N-A-9 Populus... 38 0.43
gb|CV283248.1|CV283248 WS0186.B21_N05 PTxD-IL-N-A-9 Populus... 38 0.43
gb|CX170443.1|CX170443 D11_69-85_07.ab1 leaf inoculated wit... 38 0.43
gb|CX170583.1|CX170583 H10_69-48_16.ab1 leaf inoculated wit... 38 0.43
gb|CX177236.1|CX177236 G12_69-35_14.ab1 leaf inoculated wit... 38 0.43
gb|CX178729.1|CX178729 A05_45-9_01.ab1 leaf inoculated with... 38 0.43
gb|CX180909.1|CX180909 C07_45-61_05.ab1 leaf inoculated wit... 38 0.43
gb|CX181887.1|CX181887 H10_45-113_16.ab1 leaf inoculated wi... 38 0.43
gb|CX182334.1|CX182334 B08_45-106_04.ab1 leaf inoculated wi... 38 0.43
gb|CX182398.1|CX182398 F04_45-124_12.ab1 leaf inoculated wi... 38 0.43
gb|CX184044.1|CX184044 C05_45-39_05.ab1 leaf inoculated wit... 38 0.43
gb|BP921995.1|BP921995 BP921995 full-length enriched poplar... 38 0.43
gb|DN485211.1|DN485211 M117E01.3pR Populus female catkins c... 38 0.43
gb|DN494673.1|DN494673 M117E01.5pR Populus female catkins c... 38 0.43
gb|DT471309.1|DT471309 WS01213.BR_F11 PT-GT-FL-A-3 Populus ... 38 0.43
gb|DT472136.1|DT472136 WS01225.BR.1_G09 PT-GT-FL-A-3 Populu... 38 0.43
gb|DT473561.1|DT473561 WS0123.BR_A11 PT-GT-FL-A-3 Populus t... 38 0.43
gb|DT473787.1|DT473787 WS0123.BR_L19 PT-GT-FL-A-3 Populus t... 38 0.43
gb|DT473893.1|DT473893 WS01230.BR_B04 PT-GT-FL-A-3 Populus ... 38 0.43
gb|DT476573.1|DT476573 WS01230.B21_B04 PT-GT-FL-A-3 Populus... 38 0.43
gb|DT489439.1|DT489439 WS02542.B21_D18 PT-MB-N-A-15 Populus... 38 0.43
gb|DT501738.1|DT501738 WS01314.BR_A09 PTxD-IL-FL-A-4 Populu... 38 0.43
gb|DT502053.1|DT502053 WS01315.BR_F14 PTxD-IL-FL-A-4 Populu... 38 0.43
gb|DT502277.1|DT502277 WS0132.BR_F09 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT502316.1|DT502316 WS0132.BR_H18 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT502972.1|DT502972 WS0134.BR_O17 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT503056.1|DT503056 WS0135.BR_E13 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT503071.1|DT503071 WS0135.BR_F18 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT503553.1|DT503553 WS0137.BR_A20 PTxD-IL-FL-A-4 Populus... 38 0.43
gb|DT504121.1|DT504121 WS01312.B21_B13 PTxD-IL-FL-A-4 Popul... 38 0.43
gb|DT504517.1|DT504517 WS01313.B21_K18 PTxD-IL-FL-A-4 Popul... 38 0.43
gb|DT504599.1|DT504599 WS01314.B21_A09 PTxD-IL-FL-A-4 Popul... 38 0.43
gb|DT504930.1|DT504930 WS01315.B21_F14 PTxD-IL-FL-A-4 Popul... 38 0.43
gb|AY594297.1| Populus balsamifera subsp. trichocarpa x Pop... 38 0.43
>gb|CF232861.1|CF232861 PtaJXO0016F7F0711 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 737
Score = 224 bits (113), Expect = 3e-057
Identities = 302/365 (82%)
Strand = Plus / Minus
Query: 16 gtaccgcgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccag 75
||||| ||||| |||||| |||||| ||||||| |||| |||||||||||| |||||
Sbjct: 387 gtaccacgctttccagagtgacgaagatgctcctgttcttcttcccaccatgattcccaa 328
Query: 76 cttttctctggtgccacaccaatacctccacgattgctgatccacttgtgccaatcagtc 135
|| ||||| | || ||||| || |||||||| || || |||||||||| ||||||||||
Sbjct: 327 ctcttctccgatggaacacctattcctccacggttacttatccacttgttccaatcagtc 268
Query: 136 cagtcatccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaag 195
|| ||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 267 caatcatcaacaatcttctgccactcaaatccagaaggattgaagaggaaaggagcaaac 208
Query: 196 agccaagtgcccaccatgaaccacatggatacggtgatgaagatgtaagttatagcccct 255
||||| || || ||||| |||||||| |||| || || |||| || | | || | |
Sbjct: 207 agccaggtaccaaccataaaccacatagatatagttattaagagataggcgactgcactt 148
Query: 256 ctatatgactgaccaaatatttcatacacaactagtagaatcatcagctcaaggcccttg 315
|| |||| |||||||||||||| ||||||||| || | |||||||| ||||| |||||
Sbjct: 147 ctgtatggctgaccaaatatttgatacacaacgagcaaaatcatcatctcaatacccttc 88
Query: 316 acaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacaccaca 375
|||||||| ||||||||||| || | || ||||||||||| |||||||||||||| |||
Sbjct: 87 acaaaatgactgcgggaatagagcctgtaattctcagcaaacttggcatggaacactaca 28
Query: 376 aaccc 380
|||||
Sbjct: 27 aaccc 23
>gb|AI166267.1|AI166267 xylem.est.116 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 645
Score = 157 bits (79), Expect = 7e-037
Identities = 157/183 (85%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctc 103
||||||| |||| |||||||||||| ||||| || || ||||||| ||||| || ||||
Sbjct: 631 gctcctgttcttcttcccaccatgattcccaactcttttctggtgggacacctattcctc 572
Query: 104 cacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactcaa 163
|||| || || |||||||||| |||||||| ||| ||||| |||||||||||||||||||
Sbjct: 571 cacggttacttatccacttgttccaatcagaccaatcatcaacaatcttctgccactcaa 512
Query: 164 atccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaaccacatgg 223
| |||||||||||||| |||||||| ||||| ||||| || || ||||| |||||||| |
Sbjct: 511 aaccagaaggattgaagaggaatggagcaaaaagccaggtaccaaccataaaccacatag 452
Query: 224 ata 226
|||
Sbjct: 451 ata 449
Score = 123 bits (62), Expect = 9e-027
Identities = 251/314 (79%)
Strand = Plus / Minus
Query: 259 tatgactgaccaaatatttcatacacaactagtagaatcatcagctcaaggcccttgaca 318
|||| |||||||||||||| ||| ||||| || | |||||||| ||||| |||||||||
Sbjct: 416 tatggctgaccaaatatttgataaacaacaagcaaaatcatcatctcaatacccttgaca 357
Query: 319 aaatggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacaccacaaac 378
|| || |||||||||||||| | |||||| |||||||||||||||||||| ||||||||
Sbjct: 356 aagtgactgcgggaataaagcctatagttgtcagcaaatttggcatggaagaccacaaaa 297
Query: 379 ccacgtccagtggctctgtattccgctcctccatggagtaacgtccttccgtagtagtga 438
|| | ||||||| || |||| || || ||||| || || |||||||| ||||||||
Sbjct: 296 cctctaccagtggacctatattttgccccaccatgcagcaatgtccttccatagtagtgg 237
Query: 439 gtttttgttcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatcagtata 498
|| ||||| || | || |||||||| || |||| || | || | ||||||| || |
Sbjct: 236 gtctttgtgccaagagaaaatgtgaaaaatacaggtgctagttgtaattgcatcaataaa 177
Query: 499 aaatcactcaatgcagttctgaatcctctctccaaaccgatttccatcatcatgggcagc 558
|| ||||| | |||||| | ||| || || ||||| || |||||||||| ||| ||||
Sbjct: 176 aattcacttagtgcagtgcggaaacccctttccaagccaatttccatcaacataggcaat 117
Query: 559 gccatcaaaaatcc 572
||||||||||||||
Sbjct: 116 gccatcaaaaatcc 103
>gb|BU896476.1|BU896476 X041D11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 467
Score = 151 bits (76), Expect = 4e-035
Identities = 241/297 (81%)
Strand = Plus / Minus
Query: 292 agaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctca 351
|||||||||| |||| || ||||| ||||||||||| ||||| | | ||||| |||
Sbjct: 330 agaatcatcaattcaatccctttgacgaaatggctgcgagaatacaacctgtagttatca 271
Query: 352 gcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctcca 411
||||| || ||||||||||| ||||| ||||| ||||| ||||||||| | | ||||||
Sbjct: 270 gcaaacttagcatggaacactacaaagccacggccagtagctctgtatgctgaacctcca 211
Query: 412 tggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaagaaaaca 471
|| || || |||||||| || |||||||| |||||||| | || |||||||| || |||
Sbjct: 210 tgcagcaatgtccttccataatagtgagtctttgttccaagagaaaatgtgaaaaataca 151
Query: 472 gaggccaactgaagctgcatcagtataaaatcactcaatgcagttctgaatcctctctcc 531
| |||||| || | |||||||| ||| |||||||| |||||| | | |||||| |||||
Sbjct: 150 ggggccaattgtaactgcatcaatatgaaatcacttaatgcattacgaaatcctttctcc 91
Query: 532 aaaccgatttccatcatcatgggcagcgccatcaaaaatccangnngcacaaaagac 588
| ||| |||||||||||||| |||| ||||||||||||||| |||||||||||
Sbjct: 90 agaccaatttccatcatcataggcaaagccatcaaaaatccaatttgcacaaaagac 34
Score = 61.9 bits (31), Expect = 3e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 156 ccactcaaatccagaaggattgaacaggaatggtgcaaagagccaagtgcccaccatgaa 215
||||||||| || || |||||||| ||||| || ||||| ||||| || |||||||||||
Sbjct: 466 ccactcaaaccctgatggattgaaaaggaaaggagcaaaaagccatgtccccaccatgaa 407
Query: 216 ccacatggata 226
|||||| ||||
Sbjct: 406 ccacattgata 396
>gb|AJ776567.1|AJ776567 AJ776567 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400015B12F1, mRNA sequence
Length = 468
Score = 143 bits (72), Expect = 1e-032
Identities = 227/277 (81%), Gaps = 2/277 (0%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaagtcgatagttctcagcaaatttggcatggaacacc 372
||||| ||||||||||| ||||| | | ||||| |||||||| || |||||||||||
Sbjct: 460 ttgacgaaatggctgcgagaatacaacctgtagttatcagcaaacttagcatggaacact 401
Query: 373 acaaacccacgtccagtggctctgtattccgctcctccatggagtaacgtccttccgtag 432
||||| ||||| ||||| ||||||||| | | |||||||| || || |||||||| ||
Sbjct: 400 acaaaaccacggccagtagctctgtatgctgaacctccatgcagcaatgtccttccataa 341
Query: 433 tagtgagtttttgttcccaacgagaatgtgaagaaaacagaggccaactgaagctgcatc 492
|||||||| |||||||| | || |||||||| || |||| |||||| || |||||||||
Sbjct: 340 tagtgagtctttgttccaagagaaaatgtgaaaaatacaggggccaattgtagctgcatc 281
Query: 493 agtataaaatcactcaatgcagttctg-aatcctctctccaaaccgatttccatcatcat 551
| ||| |||||||| || ||| || || |||||| |||||| ||| ||||||||||||||
Sbjct: 280 aatatgaaatcacttaacgca-ttatgaaatcctttctccagaccaatttccatcatcat 222
Query: 552 gggcagcgccatcaaaaatccangnngcacaaaagac 588
|||| ||||||||||||||| |||||||||||
Sbjct: 221 aggcaaagccatcaaaaatccaatttgcacaaaagac 185
>gb|AJ772088.1|AJ772088 AJ772088 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700001C10F1, mRNA sequence
Length = 341
Score = 87.7 bits (44), Expect = 5e-016
Identities = 174/216 (80%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 292 agaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctca 351
|||||||||| |||| || ||||| ||||||||||| ||||| | | ||||| |||
Sbjct: 114 agaatcatcaattcaatccctttgacgaaatggctgcgagaatacaacctgtagttatca 173
Query: 352 gcaaatttggcatggaacaccacaaacccacgtccagtggctctgtattccgctcctcca 411
||||| || ||||||||||| ||||| ||||| ||||| ||||||||| | | ||||||
Sbjct: 174 gcaaacttagcatggaacactacaaagccacggccagtagctctgtatgctgaacctcca 233
Query: 412 tggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaagaaaaca 471
|| || || |||||||| || |||||||| |||||||| | || |||||||| || |||
Sbjct: 234 tgcagcaatgtccttccataatagtgagtctttgttccaagagaaaatgtgaaaaataca 293
Query: 472 -gaggccaactgaagctgcatcagtataaaatcact 506
| |||||| || | |||||||| ||| ||||||||
Sbjct: 294 ggcggccaattgtaactgcatcaatatgaaatcact 329
Score = 44.1 bits (22), Expect = 0.007
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 181 aggaatggtgcaaagagccaagtgcccaccatgaaccacatggata 226
||||| || ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 3 aggaaaggagcaaaaagccatgtccccaccatgaaccacattgata 48
>gb|AI166257.1|AI166257 xylem.est.107 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 583
Score = 71.9 bits (36), Expect = 3e-011
Identities = 135/168 (80%)
Strand = Plus / Minus
Query: 406 cctccatggagtaacgtccttccgtagtagtgagtttttgttcccaacgagaatgtgaag 465
||||||||||| || |||||||| |||||||| || ||||| || | || ||||||||
Sbjct: 567 cctccatggagcaatgtccttccatagtagtgggtctttgtgccaagagaaaatgtgaaa 508
Query: 466 aaaacagaggccaactgaagctgcatcagtataaaatcactcaatgcagttctgaatcct 525
|| |||| || | || | |||||||||||||| ||||| | |||||| | ||| ||
Sbjct: 507 aatacaggtgctagttgtaattgcatcagtataaattcacttagtgcagtgcggaaaccc 448
Query: 526 ctctccaaaccgatttccatcatcatgggcagcgccatcaaaaatcca 573
|| ||||| || |||||||||| ||| |||| ||||||||||||||||
Sbjct: 447 ctttccaagccaatttccatcaacataggcaacgccatcaaaaatcca 400
>gb|DN494975.1|DN494975 N009C11.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009C11 5', mRNA sequence
Length = 826
Score = 69.9 bits (35), Expect = 1e-010
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 17 taccgcgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagc 76
|||||||||| |||||| |||||| ||||||| |||| |||||||||||| ||||| |
Sbjct: 115 taccgcgctttccagagtgacgaagatgctcctgttcttcttcccaccatgattcccaac 56
Query: 77 ttttctctggtgccacaccaatacctccacgattgctgatccacttgtgccaatc 131
| |||| || || ||||| || |||||||| || || |||||||||| ||||||
Sbjct: 55 tcttctatgatggaacacctattcctccacggttacttatccacttgttccaatc 1
>gb|CN518891.1|CN518891 GQ0102.B3_E01 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_E01 5', mRNA sequence
Length = 508
Score = 65.9 bits (33), Expect = 2e-009
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctc 103
|||||||||| ||||||||||| || ||||| ||||| ||||| |||||||| ||||
Sbjct: 124 gctcctgctccttttcccaccaggattcccaacttttatctggatgaacaccaatccctc 65
Query: 104 cacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactcaa 163
|||| || | |||||||| | |||||| || ||||||| | |||||| ||||||||||
Sbjct: 64 cacggttatttatccacttattccaatctgtatagtcatcaagaatcttttgccactcaa 5
Query: 164 a 164
|
Sbjct: 4 a 4
>gb|CK099645.1|CK099645 A079P12.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A079P12 5', mRNA sequence
Length = 178
Score = 60.0 bits (30), Expect = 1e-007
Identities = 129/158 (81%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttct-ctgg-tgccacaccaatacc 101
|||| ||||| ||||||||||| || ||||| ||||| | |||| || ||||||||| ||
Sbjct: 158 gctcttgctccttttcccaccaggattcccaacttttattctggatgacacaccaatccc 99
Query: 102 tccacgattgctgatccacttgtgccaatcagtccagtcatccacaatcttctgccactc 161
|||||| || | |||||||| | |||||| || ||||||| | |||||| ||||||||
Sbjct: 98 tccacggttatttatccacttattccaatctgtatagtcatcaagaatcttttgccactc 39
Query: 162 aaatccagaaggattgaacaggaatggtgcaaagagcc 199
||| || || |||||||| ||||| || ||||| ||||
Sbjct: 38 aaa-cctgatggattgaaaaggaaaggagcaaaaagcc 2
>gb|CK116341.1|CK116341 B010P30 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B010P30 5', mRNA sequence
Length = 297
Score = 60.0 bits (30), Expect = 1e-007
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 137 agtcatccacaatcttctgccactcaaatccagaaggattgaacaggaatggtgcaaaga 196
||||||| | |||||| |||||||||| || || |||||||| ||||| || ||||| |
Sbjct: 267 agtcatcaagaatcttttgccactcaac-cctgatggattgaaaaggaaaggagcaaaaa 209
Query: 197 gccaagtgcccaccatgaaccacatggata 226
|||| || ||||||||||||||||| ||||
Sbjct: 208 gccatgtccccaccatgaaccacattgata 179
Score = 48.1 bits (24), Expect = 4e-004
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 292 agaatcatcagctcaaggcccttgacaaaatggctgcgggaataaagtcgatagttctca 351
|||||||||| |||| || ||||| ||||||||||| ||||| | | ||||| |||
Sbjct: 113 agaatcatcaattcaatccctttgacgaaatggctgcgagaatacaacctgtagttatca 54
Query: 352 gcaaatttggcatggaacaccacaaacccacgtccagtggctctgtat 399
||||| || ||||||||||| ||||| || | ||||| |||||||||
Sbjct: 53 gcaaacttagcatggaacactacaaagccgcaaccagtagctctgtat 6
>gb|AI164628.1|AI164628 A066P21U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 268
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 149 tcttctgccactcaaatccagaaggattgaaca 181
|||| ||||||||||||||||| ||||||||||
Sbjct: 191 tcttttgccactcaaatccagatggattgaaca 159
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaag 338
|||||||||||||||||||| |||||
Sbjct: 27 ttgacaaaatggctgcgggagtaaag 2
>gb|CV256705.1|CV256705 WS0244.B21_J09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_J09 3', mRNA sequence
Length = 834
Score = 50.1 bits (25), Expect = 1e-004
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 17 taccgcgcttcccagagcaacgaaggggctcctgctctttttcccaccatgactcccagc 76
|||| ||||| |||||| |||||| ||||||| |||| |||||||||||| ||||| |
Sbjct: 766 taccacgctttccagagtgacgaagatgctcctgttcttcttcccaccatgattcccaac 825
Query: 77 ttttctctg 85
| |||||||
Sbjct: 826 tcttctctg 834
>gb|CK099401.1|CK099401 A066P21.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A066P21 5', mRNA sequence
Length = 323
Score = 48.1 bits (24), Expect = 4e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaaca 181
||||||||||||||||| ||||||||||
Sbjct: 278 tgccactcaaatccagatggattgaaca 251
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaag 338
|||||||||||||||||||| |||||
Sbjct: 119 ttgacaaaatggctgcgggagtaaag 94
>gb|AC149540.1| Populus trichocarpa clone Pop1-111J19, complete sequence
Length = 96953
Score = 48.1 bits (24), Expect = 4e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 154 tgccactcaaatccagaaggattgaaca 181
||||||||||||||||| ||||||||||
Sbjct: 28434 tgccactcaaatccagatggattgaaca 28407
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 313 ttgacaaaatggctgcgggaataaag 338
|||||||||||||||||||| |||||
Sbjct: 28195 ttgacaaaatggctgcgggagtaaag 28170
>gb|AJ770061.1|AJ770061 AJ770061 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100006E01F1, mRNA sequence
Length = 295
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 313 ttgacaaaatggctgcgggaataaag 338
|||||||||||||||||||| |||||
Sbjct: 33 ttgacaaaatggctgcgggagtaaag 58
>gb|AI165231.1|AI165231 A079P12U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 359
Score = 40.1 bits (20), Expect = 0.11
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctggtgccacaccaatacctc 103
|||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||| ||||
Sbjct: 107 gctcttgctccttttcccaccaggattcccaacttttttctggatgaacaccaatccctc 48
Query: 104 cacg 107
||||
Sbjct: 47 cacg 44
>gb|BU820590.1|BU820590 UB11CPH01 Populus tremula cambium cDNA library Populus tremula
cDNA 5 prime, mRNA sequence
Length = 510
Score = 38.2 bits (19), Expect = 0.43
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 44 gctcctgctctttttcccaccatgactcccagcttttctctgg 86
|||| ||||| ||||||||||| || ||||| ||||| |||||
Sbjct: 75 gctcttgctccttttcccaccaggattcccaacttttttctgg 33
>gb|BU867555.1|BU867555 M101F06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 547
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 186 ttctctggtgccacaccaa 168
>gb|BU867560.1|BU867560 M101F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 548
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 178 ttctctggtgccacaccaa 160
>gb|BU867585.1|BU867585 M102A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 527
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 191 ttctctggtgccacaccaa 173
>gb|BU867772.1|BU867772 M104B04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 333
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 160 ttctctggtgccacaccaa 142
>gb|BU867832.1|BU867832 M104H05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 564
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 185 ttctctggtgccacaccaa 167
>gb|BU867882.1|BU867882 M105E04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 545
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 190 ttctctggtgccacaccaa 172
>gb|BU867930.1|BU867930 M106A10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 497
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 190 ttctctggtgccacaccaa 172
>gb|BU868144.1|BU868144 M111H10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 446
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 173 ttctctggtgccacaccaa 155
>gb|BU868191.1|BU868191 M112C11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 534
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 173 ttctctggtgccacaccaa 155
>gb|BU868275.1|BU868275 M113E01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 550
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 173 ttctctggtgccacaccaa 155
>gb|BU868490.1|BU868490 M116E02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 348
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 186 ttctctggtgccacaccaa 168
>gb|BU868527.1|BU868527 M117A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 553
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 178 ttctctggtgccacaccaa 160
>gb|BU868552.1|BU868552 M117C05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 482
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 186 ttctctggtgccacaccaa 168
>gb|BU868678.1|BU868678 M118G11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 564
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 190 ttctctggtgccacaccaa 172
>gb|BU868699.1|BU868699 M120B01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 542
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 199 ttctctggtgccacaccaa 181
>gb|BU868742.1|BU868742 M120F01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 526
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 190 ttctctggtgccacaccaa 172
>gb|BU868974.1|BU868974 M124D10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 567
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 193 ttctctggtgccacaccaa 175
>gb|BU869238.1|BU869238 M127G03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 533
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 172 ttctctggtgccacaccaa 154
>gb|BU869358.1|BU869358 M129B07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 575
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 202 ttctctggtgccacaccaa 184
>gb|BU875201.1|BU875201 V003E05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 564
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 173 ttctctggtgccacaccaa 155
>gb|BU875578.1|BU875578 V008G08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 548
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 173 ttctctggtgccacaccaa 155
>gb|BU876047.1|BU876047 V015D10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 451
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 178 ttctctggtgccacaccaa 160
>gb|BU877162.1|BU877162 V030bG02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 585
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 201 ttctctggtgccacaccaa 183
>gb|BU877301.1|BU877301 V032D08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 559
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 175 ttctctggtgccacaccaa 157
>gb|BU879773.1|BU879773 UM37TC07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 566
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 191 ttctctggtgccacaccaa 173
>gb|BU879938.1|BU879938 UM39TD11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 566
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 202 ttctctggtgccacaccaa 184
>gb|BU879946.1|BU879946 UM39TE07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 566
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 197 ttctctggtgccacaccaa 179
>gb|BU880045.1|BU880045 UM40TG07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 567
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 195 ttctctggtgccacaccaa 177
>gb|BU880046.1|BU880046 UM40TG09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 577
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 196 ttctctggtgccacaccaa 178
>gb|BU880112.1|BU880112 UM41TF02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 500
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 187 ttctctggtgccacaccaa 169
>gb|BU880282.1|BU880282 UM43TH02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 577
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 195 ttctctggtgccacaccaa 177
>gb|BU880322.1|BU880322 UM44TD07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 575
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 200 ttctctggtgccacaccaa 182
>gb|BU880380.1|BU880380 UM45TC02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 440
Score = 38.2 bits (19), Expect = 0.43
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 79 ttctctggtgccacaccaa 97
|||||||||||||||||||
Sbjct: 196 ttctctggtgccacaccaa 178
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 82,054
Number of Sequences: 369679
Number of extensions: 82054
Number of successful extensions: 22040
Number of sequences better than 0.5: 218
Number of HSP's better than 0.5 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21795
Number of HSP's gapped (non-prelim): 238
length of query: 690
length of database: 203,408,664
effective HSP length: 19
effective length of query: 671
effective length of database: 196,384,763
effective search space: 131774175973
effective search space used: 131774175973
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)