BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAZ3f05.yg.3.1
         (1626 letters)

Database: Populus_nucl_with_EST.fasta 
           369,679 sequences; 203,408,664 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BU896326.1|BU896326  X039B02 Populus wood cDNA library Po...    80   3e-013
gb|CX167513.1|CX167513  C05_69-3_05.ab1 leaf inoculated with...    72   7e-011
gb|CX176911.1|CX176911  A05_69-119_01.ab1 leaf inoculated wi...    64   2e-008
gb|BU821454.1|BU821454  UB23CPD09 Populus tremula cambium cD...    60   3e-007
gb|BU830332.1|BU830332  T007A06 Populus apical shoot cDNA li...    60   3e-007
gb|CK096692.1|CK096692  UB23CPD09.3pR Populus active cambium...    60   3e-007
gb|CX659218.1|CX659218  PO01027H09 Poplar SC cDNA library Po...    60   3e-007
gb|CV225794.1|CV225794  WS0162.B21_G17 PT-DX-A-7 Populus tri...    58   1e-006
gb|DV465740.1|DV465740  MTUNUL1.P42.E10 NUL Populus fremonti...    58   1e-006
gb|DN490148.1|DN490148  UB43DPE12.3pR Populus active cambium...    54   2e-005
gb|DN500119.1|DN500119  UB43DPE12.5pR Populus active cambium...    54   2e-005
gb|DT471997.1|DT471997  WS0122.BR_M05 PT-GT-FL-A-3 Populus t...    54   2e-005
gb|BU813620.1|BU813620  N012G06 Populus bark cDNA library Po...    52   7e-005
gb|CK090784.1|CK090784  F024P68.3pR Populus flower cDNA libr...    50   3e-004
gb|CN523483.1|CN523483  GQ015M02.T3_F09 GQ015 Populus tricho...    50   3e-004
gb|DT479417.1|DT479417  WS02525.BR_M22 PT-MB-N-A-15 Populus ...    50   3e-004
gb|DT484576.1|DT484576  WS02525.B21_M22 PT-MB-N-A-15 Populus...    50   3e-004
gb|BU822796.1|BU822796  UB43DPE12 Populus tremula cambium cD...    46   0.004
gb|CA923573.1|CA923573  MTU7CL.P12.B05 Aspen leaf cDNA Libra...    46   0.004
gb|CV236725.1|CV236725  WS01225.B21.1_C23 PT-GT-FL-A-3 Popul...    46   0.004
gb|CX659359.1|CX659359  PO01029G04 Poplar SC cDNA library Po...    44   0.017
gb|CA926324.1|CA926324  MTU6CR.P13.F09 Aspen root cDNA Libra...    40   0.26 
gb|CV268519.1|CV268519  WS0205.B21_L11 PTxN-IB-N-A-11 Populu...    40   0.26 
gb|CV279676.1|CV279676  WS0132.B21_N13 PTxD-IL-FL-A-4 Populu...    40   0.26 
gb|BP933906.1|BP933906  BP933906 full-length enriched poplar...    40   0.26 
gb|BP934434.1|BP934434  BP934434 full-length enriched poplar...    40   0.26 
gb|DT517734.1|DT517734  WS02435.B21_C12 PTxD-ICC-N-A-14 Popu...    40   0.26 
>gb|BU896326.1|BU896326 X039B02 Populus wood cDNA library Populus tremula x Populus
           tremuloides cDNA 5 prime, mRNA sequence
          Length = 736

 Score = 79.8 bits (40), Expect = 3e-013
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 411 tttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaatt 470
           ||||| ||||||||||||||  | || ||||||| |||||||||||| |||||| |||| 
Sbjct: 29  tttatcgttgggcccatacccattgaagatggaattggaaaagaagttgcaactcaaatc 88

                                                                       
Query: 471 gttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatc 530
              |||| |||||  || || |||||||| ||||| ||||| | |||||||||||| |||
Sbjct: 89  acaacaaccatggaaaccaataaaacattttacacagattctaatggacgtgattttatc 148

                   
Query: 531 aaaaggat 538
           ||||||||
Sbjct: 149 aaaaggat 156

 Score = 60.0 bits (30), Expect = 3e-007
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  |||||||| || || |||||| ||||||||   || |||
Sbjct: 623  caggagcttgatgatggaaaagttctcctccgtttagctcatttatatgagatgggagag 682

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 683  gacaaggatctttc 696

 Score = 42.1 bits (21), Expect = 0.066
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 686 ggatggacaaatagagctaatgctacacaggag 718
           |||||||||||||||||| ||||| || |||||
Sbjct: 304 ggatggacaaatagagctgatgctccataggag 336
>gb|CX167513.1|CX167513 C05_69-3_05.ab1 leaf inoculated with Marssonia pathogen of Populus
           deltoides Populus deltoides cDNA, mRNA sequence
          Length = 623

 Score = 71.9 bits (36), Expect = 7e-011
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 324 tattggatgaagtgcaccagcagataaattcatggatttatcagattaccag 375
           ||||||||||||||||||||||||| | ||||||||| |||||||| |||||
Sbjct: 81  tattggatgaagtgcaccagcagatcagttcatggatatatcagataaccag 132
>gb|CX176911.1|CX176911 A05_69-119_01.ab1 leaf inoculated with Marssonia pathogen of
           Populus deltoides Populus deltoides cDNA, mRNA sequence
          Length = 682

 Score = 63.9 bits (32), Expect = 2e-008
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 324 tattggatgaagtgcaccagcagataaattcatggatttatcagattaccag 375
           ||||||||||||||||||||||||| | ||| ||||| |||||||| |||||
Sbjct: 186 tattggatgaagtgcaccagcagatcagttcgtggatatatcagataaccag 237

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 233 caggcttctggagcatacatattccgccctaatggcaca 271
           ||||| |||||||||||||| ||||| || |||||||||
Sbjct: 95  caggcctctggagcatacatcttccgaccaaatggcaca 133
>gb|BU821454.1|BU821454 UB23CPD09 Populus tremula cambium cDNA library Populus tremula cDNA 5
            prime, mRNA sequence
          Length = 441

 Score = 60.0 bits (30), Expect = 3e-007
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  |||||||| || || |||||| ||||||||   || |||
Sbjct: 243  caggagcttgacgatggaaaagttctcctccgtttagctcatttatatgagatgggagag 302

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 303  gacaaggatctttc 316
>gb|BU830332.1|BU830332 T007A06 Populus apical shoot cDNA library Populus tremula x Populus
            tremuloides cDNA 5 prime, mRNA sequence
          Length = 382

 Score = 60.0 bits (30), Expect = 3e-007
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  |||||||| || || |||||| ||||||||   || |||
Sbjct: 150  caggagcttgatgatggaaaagttctcctccgtttagctcatttatatgagatgggagag 209

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 210  gacaaggatctttc 223
>gb|CK096692.1|CK096692 UB23CPD09.3pR Populus active cambium cDNA library Populus tremula
            cDNA clone UB23CPD09 3', mRNA sequence
          Length = 854

 Score = 60.0 bits (30), Expect = 3e-007
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  |||||||| || || |||||| ||||||||   || |||
Sbjct: 722  caggagcttgacgatggaaaagttctcctccgtttagctcatttatatgagatgggagag 663

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 662  gacaaggatctttc 649
>gb|CX659218.1|CX659218 PO01027H09 Poplar SC cDNA library Populus alba x Populus tremula var.
            glandulosa cDNA clone PO01027H09 5', mRNA sequence
          Length = 744

 Score = 60.0 bits (30), Expect = 3e-007
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  |||||||| || || |||||| ||||||||   || |||
Sbjct: 69   caggagcttgatgatggaaaagttctcctccgtttagctcatttatatgagatgggagag 128

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 129  gacaaggatctttc 142
>gb|CV225794.1|CV225794 WS0162.B21_G17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_G17
            3', mRNA sequence
          Length = 757

 Score = 58.0 bits (29), Expect = 1e-006
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||||||||||||||||
Sbjct: 482  ctccttcggttggctcacctttatgagaccggggaggacaaggat 438

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 851 gtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||||||||||| || ||||| |||||
Sbjct: 660 gtggcgtcgaacatttggccaagagatatattcccc 625
>gb|DV465740.1|DV465740 MTUNUL1.P42.E10 NUL Populus fremontii x Populus angustifolia cDNA,
            mRNA sequence
          Length = 807

 Score = 58.0 bits (29), Expect = 1e-006
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||||||||||||||||
Sbjct: 632  ctccttcggttggctcacctttatgagaccggggaggacaaggat 676

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 851 gtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||||||||||| || ||||| |||||
Sbjct: 454 gtggcgtcgaacatttggccaagagatatattcccc 489
>gb|DN490148.1|DN490148 UB43DPE12.3pR Populus active cambium cDNA library Populus tremula
            cDNA clone UB43DPE12 3', mRNA sequence
          Length = 588

 Score = 54.0 bits (27), Expect = 2e-005
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 1017 gatggaagtgttctccttcggtttgctcatctatatgaggccggggaggacaaggatct 1075
            |||||||  |||||||||||||| || ||  |||||||||  |||||||||||||||||
Sbjct: 506  gatggaaaggttctccttcggttagcacacttatatgaggttggggaggacaaggatct 448
>gb|DN500119.1|DN500119 UB43DPE12.5pR Populus active cambium cDNA library Populus tremula
            cDNA clone UB43DPE12 5', mRNA sequence
          Length = 591

 Score = 54.0 bits (27), Expect = 2e-005
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1017 gatggaagtgttctccttcggtttgctcatctatatgaggccggggaggacaaggatct 1075
            |||||||  |||||||||||||| || ||  |||||||||  |||||||||||||||||
Sbjct: 79   gatggaaaggttctccttcggttagcacacttatatgaggttggggaggacaaggatct 137
>gb|DT471997.1|DT471997 WS0122.BR_M05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0122_M05
            5', mRNA sequence
          Length = 561

 Score = 54.0 bits (27), Expect = 2e-005
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1017 gatggaagtgttctccttcggtttgctcatctatatgaggccggggaggacaaggatct 1075
            |||||||  |||||||||||||| || ||  |||||||||  |||||||||||||||||
Sbjct: 159  gatggaaaggttctccttcggttagcacacttatatgaggttggggaggacaaggatct 217
>gb|BU813620.1|BU813620 N012G06 Populus bark cDNA library Populus tremula x Populus
            tremuloides cDNA 5 prime, mRNA sequence
          Length = 509

 Score = 52.0 bits (26), Expect = 7e-005
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  | |||||| || || |||||| ||||||||   || |||
Sbjct: 371  caggagcttgatgatggaaaagctctcctccgtttagctcatttatatgagatgggagag 430

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 431  gacaaggatctttc 444

 Score = 42.1 bits (21), Expect = 0.066
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 686 ggatggacaaatagagctaatgctacacaggag 718
           |||||||||||||||||| ||||| || |||||
Sbjct: 52  ggatggacaaatagagctgatgctccataggag 84
>gb|CK090784.1|CK090784 F024P68.3pR Populus flower cDNA library Populus trichocarpa cDNA
            clone F024P68 3', mRNA sequence
          Length = 821

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||| ||||||||||||
Sbjct: 483  ctccttcggttggctcacctttatgagaccggtgaggacaaggat 439

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 836 aggagaaggagctcggtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||  |||||||||| ||||||||||| || ||||| |||||
Sbjct: 676 aggagaaggtgccaggtggcgtcgaacatttggccaagagatatattcccc 626
>gb|CN523483.1|CN523483 GQ015M02.T3_F09 GQ015 Populus trichocarpa x Populus deltoides cDNA
            clone GQ015M02_F09 5', mRNA sequence
          Length = 770

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||| ||||||||||||
Sbjct: 339  ctccttcggttggctcacctttatgagaccggtgaggacaaggat 383

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 836 aggagaaggagctcggtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||  |||||||||| ||||||||||| || ||||| |||||
Sbjct: 146 aggagaaggtgccaggtggcgtcgaacatttggccaagagatatattcccc 196
>gb|DT479417.1|DT479417 WS02525.BR_M22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
            WS02525_M22 5', mRNA sequence
          Length = 793

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||| ||||||||||||
Sbjct: 301  ctccttcggttggctcacctttatgagaccggtgaggacaaggat 345

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 836 aggagaaggagctcggtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||  |||||||||| ||||||||||| || ||||| |||||
Sbjct: 108 aggagaaggtgccaggtggcgtcgaacatttggccaagagatatattcccc 158
>gb|DT484576.1|DT484576 WS02525.B21_M22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
            WS02525_M22 3', mRNA sequence
          Length = 780

 Score = 50.1 bits (25), Expect = 3e-004
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||| |||| ||||||||||||
Sbjct: 720  ctccttcggttggctcacctttatgagaccggtgaggacaaggat 676
>gb|BU822796.1|BU822796 UB43DPE12 Populus tremula cambium cDNA library Populus tremula cDNA 5
            prime, mRNA sequence
          Length = 423

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggatct 1075
            ||||||||||| || ||  |||||||||  |||||||||||||||||
Sbjct: 95   ctccttcggttagcacacttatatgaggttggggaggacaaggatct 141
>gb|CA923573.1|CA923573 MTU7CL.P12.B05 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
            sequence
          Length = 480

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1017 gatggaagtgttctccttcggtttgctcatctatatgaggccggggaggacaaggatct 1075
            |||||||  |||||||||||| | || ||  |||||||||  |||||||||||||||||
Sbjct: 280  gatggaaaggttctccttcggctagcacacttatatgaggttggggaggacaaggatct 222
>gb|CV236725.1|CV236725 WS01225.B21.1_C23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
           WS01225_C23 3', mRNA sequence
          Length = 938

 Score = 46.1 bits (23), Expect = 0.004
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 836 aggagaaggagctcggtggcgtcggacatttggccaggaaatatactcccc 886
           ||||||||| ||  |||||||||| ||||||||||| || ||||| |||||
Sbjct: 523 aggagaaggtgccaggtggcgtcgaacatttggccaagagatatattcccc 473

 Score = 42.1 bits (21), Expect = 0.066
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 1029 ctccttcggtttgctcatctatatgaggccggggaggacaaggat 1073
            ||||||||||| ||||| || |||||  |||| ||||||||||||
Sbjct: 330  ctccttcggttggctcacctttatgaaaccggtgaggacaaggat 286

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 582 attgctggaaactattatcctgttaatcttgg 613
           ||||||||||| ||||| ||||| ||||||||
Sbjct: 777 attgctggaaattattaccctgtaaatcttgg 746
>gb|CX659359.1|CX659359 PO01029G04 Poplar SC cDNA library Populus alba x Populus tremula var.
            glandulosa cDNA clone PO01029G04 5', mRNA sequence
          Length = 282

 Score = 44.1 bits (22), Expect = 0.017
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1005 caggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggag 1064
            ||||||||||| |||||||  | |||||| || |  |||||| ||||||||   || |||
Sbjct: 71   caggagcttgatgatggaaaaggtctcctccgttaagctcatttatatgagatgggagag 130

                          
Query: 1065 gacaaggatctttc 1078
            ||||||||||||||
Sbjct: 131  gacaaggatctttc 144
>gb|CA926324.1|CA926324 MTU6CR.P13.F09 Aspen root cDNA Library Populus tremuloides cDNA,
           mRNA sequence
          Length = 579

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 582 attgctggaaactattatcctgttaatcttgg 613
           ||||||||||| ||||| ||||| ||||||||
Sbjct: 243 attgctggaaattattaccctgtaaatcttgg 274
>gb|CV268519.1|CV268519 WS0205.B21_L11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
           cDNA clone WS0205_L11 3', mRNA sequence
          Length = 571

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 441 ggaaatggaaaagaagtagcaact 464
           |||||||||||||||| |||||||
Sbjct: 368 ggaaatggaaaagaagaagcaact 345
>gb|CV279676.1|CV279676 WS0132.B21_N13 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
           deltoides cDNA clone WS0132_N13 3', mRNA sequence
          Length = 721

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 441 ggaaatggaaaagaagtagcaact 464
           |||||||||||||||| |||||||
Sbjct: 171 ggaaatggaaaagaagaagcaact 194
>gb|BP933906.1|BP933906 BP933906 full-length enriched poplar cDNA library Populus nigra
           cDNA clone PnFL1-058_A13.r 3', mRNA sequence
          Length = 593

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 441 ggaaatggaaaagaagtagcaact 464
           |||||||||||||||| |||||||
Sbjct: 155 ggaaatggaaaagaagaagcaact 178
>gb|BP934434.1|BP934434 BP934434 full-length enriched poplar cDNA library Populus nigra
           cDNA clone PnFL1-065_F11.r 3', mRNA sequence
          Length = 661

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 441 ggaaatggaaaagaagtagcaact 464
           |||||||||||||||| |||||||
Sbjct: 155 ggaaatggaaaagaagaagcaact 178
>gb|DT517734.1|DT517734 WS02435.B21_C12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
           deltoides cDNA clone WS02435_C12 3', mRNA sequence
          Length = 882

 Score = 40.1 bits (20), Expect = 0.26
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 441 ggaaatggaaaagaagtagcaact 464
           |||||||||||||||| |||||||
Sbjct: 111 ggaaatggaaaagaagaagcaact 134
  Database: Populus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:49 PM
  Number of letters in database: 203,408,664
  Number of sequences in database:  369,679
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 228,388
Number of Sequences: 369679
Number of extensions: 228388
Number of successful extensions: 67251
Number of sequences better than  0.5: 27
Number of HSP's better than  0.5 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67163
Number of HSP's gapped (non-prelim): 87
length of query: 1626
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1607
effective length of database: 196,384,763
effective search space: 315590314141
effective search space used: 315590314141
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)