BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE23e10.yg.3.1
(2083 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB041505.1| Populus nigra PnATH mRNA for ABC transporte... 287 9e-076
gb|CK318911.1|CK318911 X9P04g02 Populus stem seasonal libra... 224 1e-056
gb|BU896248.1|BU896248 X037G10 Populus wood cDNA library Po... 218 7e-055
gb|DV466465.1|DV466465 MTUNUL1.P6.A01 NUL Populus fremontii... 212 4e-053
gb|CX174260.1|CX174260 D02_69-34_08.ab1 leaf inoculated wit... 204 1e-050
gb|AJ776542.1|AJ776542 AJ776542 Populus euphratica root 3-6... 194 9e-048
gb|CV266019.1|CV266019 WS02028.B21_O09 PTxN-IB-N-A-11 Popul... 180 1e-043
gb|DT508799.1|DT508799 WS02421.BR_P13 PTxD-ICC-N-A-14 Popul... 178 6e-043
gb|CV238256.1|CV238256 WS0125.B21_O14 PT-GT-FL-A-3 Populus ... 176 2e-042
gb|CN524590.1|CN524590 GQ015M17.T3_H05 GQ015 Populus tricho... 174 9e-042
gb|CA927277.1|CA927277 MTU6CR.P7.A11 Aspen root cDNA Librar... 172 3e-041
gb|BU808826.1|BU808826 UL50PD12 Populus leaf cDNA library P... 170 1e-040
gb|CA926673.1|CA926673 MTU6CR.P17.G12 Aspen root cDNA Libra... 170 1e-040
gb|CA933473.1|CA933473 MTU5CS.P8.E08 Aspen stem cDNA Librar... 170 1e-040
gb|CF119061.1|CF119061 MTU10CS.P13.A02 Aspen stem cDNA Libr... 170 1e-040
gb|CF119396.1|CF119396 MTU10CS.P1.C12 Aspen stem cDNA Libra... 170 1e-040
gb|CF119421.1|CF119421 MTU10CS.P1.F06 Aspen stem cDNA Libra... 170 1e-040
gb|CF119568.1|CF119568 MTU10CS.P3.E06 Aspen stem cDNA Libra... 170 1e-040
gb|CK097968.1|CK097968 UBUF11_EMPTY8.3pR Populus active cam... 170 1e-040
gb|CN519616.1|CN519616 GQ0104.B3_J07 GQ010 Populus trichoca... 170 1e-040
gb|CV239716.1|CV239716 WS0233.B21_E06 PT-MB-A-13 Populus tr... 170 1e-040
gb|CV239806.1|CV239806 WS0233.B21_I14 PT-MB-A-13 Populus tr... 170 1e-040
gb|CV239968.1|CV239968 WS0234.B21_A07 PT-MB-A-13 Populus tr... 170 1e-040
gb|CV245806.1|CV245806 WS0259.B21_G23 PT-MB-N-A-15 Populus ... 170 1e-040
gb|CV262832.1|CV262832 WS0202.B21_K03 PTxN-IB-N-A-11 Populu... 170 1e-040
gb|CV283856.1|CV283856 WS0188.B21_H15 PTxD-IL-N-A-9 Populus... 170 1e-040
gb|CX172210.1|CX172210 G10_69-76_14.ab1 leaf inoculated wit... 170 1e-040
gb|CX178489.1|CX178489 F11_45-27_11.ab1 leaf inoculated wit... 170 1e-040
gb|CX181819.1|CX181819 E11_45-14_09.ab1 leaf inoculated wit... 170 1e-040
gb|DT513408.1|DT513408 WS02421.B21_P13 PTxD-ICC-N-A-14 Popu... 170 1e-040
gb|DT492497.1|DT492497 WS02550.C21_O09 PT-MB-N-A-15 Populus... 167 2e-039
gb|CA930214.1|CA930214 MTU2CA.P8.F06 Aspen apex cDNA Librar... 165 8e-039
gb|CA932230.1|CA932230 MTU5CS.P10.C10 Aspen stem cDNA Libra... 163 3e-038
gb|CA932897.1|CA932897 MTU5CS.P18.H09 Aspen stem cDNA Libra... 163 3e-038
gb|BP925546.1|BP925546 BP925546 full-length enriched poplar... 163 3e-038
gb|BU814034.1|BU814034 N024B09 Populus bark cDNA library Po... 161 1e-037
gb|BU885895.1|BU885895 R037G02 Populus root cDNA library Po... 159 5e-037
gb|BU834950.1|BU834950 T067F08 Populus apical shoot cDNA li... 157 2e-036
gb|CA925024.1|CA925024 MTU7TL.P12.F11 Aspen leaf cDNA Libra... 157 2e-036
gb|CA925555.1|CA925555 MTU7TL.P3.A11 Aspen leaf cDNA Librar... 157 2e-036
gb|CF119445.1|CF119445 MTU10CS.P1.H11 Aspen stem cDNA Libra... 157 2e-036
gb|CN193046.1|CN193046 PtdH315 hybrid poplar systemically w... 157 2e-036
gb|CX178353.1|CX178353 D08_45-112_08.ab1 leaf inoculated wi... 157 2e-036
gb|CF118905.1|CF118905 MTU10CS.P10.H09 Aspen stem cDNA Libr... 151 1e-034
gb|CF119472.1|CF119472 MTU10CS.P2.C09 Aspen stem cDNA Libra... 151 1e-034
gb|CK099947.1|CK099947 A091P34.5pR Hybrid aspen plasmid lib... 151 1e-034
gb|CX185015.1|CX185015 E11_45-47_09.ab1 leaf inoculated wit... 151 1e-034
gb|CA926568.1|CA926568 MTU6CR.P16.E09 Aspen root cDNA Libra... 149 5e-034
gb|CA929470.1|CA929470 MTU2CA.P14.B12 Aspen apex cDNA Libra... 149 5e-034
gb|AJ773986.1|AJ773986 AJ773986 Populus euphratica shoot 3-... 149 5e-034
gb|AJ774244.1|AJ774244 AJ774244 Populus euphratica shoot 3-... 149 5e-034
gb|CX186554.1|CX186554 G07_45-95_13.ab1 leaf inoculated wit... 147 2e-033
gb|CA932403.1|CA932403 MTU5CS.P12.E07 Aspen stem cDNA Libra... 143 3e-032
gb|CA933066.1|CA933066 MTU5CS.P3.A07 Aspen stem cDNA Librar... 143 3e-032
gb|CA934121.1|CA934121 MTU3TS.P3.B10 Aspen stem cDNA Librar... 143 3e-032
gb|CN522809.1|CN522809 GQ0124.B3_O13 GQ012 Populus trichoca... 143 3e-032
gb|BU817970.1|BU817970 UA23DPD12 Populus tremula cambium cD... 141 1e-031
gb|AJ771347.1|AJ771347 AJ771347 Populus euphratica leaf 3-6... 139 5e-031
gb|CA929946.1|CA929946 MTU2CA.P4.H05 Aspen apex cDNA Librar... 131 1e-028
gb|CA926567.1|CA926567 MTU6CR.P16.E08 Aspen root cDNA Libra... 127 2e-027
gb|CA932206.1|CA932206 MTU5CS.P10.A03 Aspen stem cDNA Libra... 125 7e-027
gb|CK089121.1|CK089121 A091P34.3pR Hybrid aspen plasmid lib... 125 7e-027
gb|CV254435.1|CV254435 WS0241.B21_D14 PTxD-ICC-N-A-14 Popul... 125 7e-027
gb|CA933306.1|CA933306 MTU5CS.P6.C04 Aspen stem cDNA Librar... 121 1e-025
gb|CA933645.1|CA933645 MTU3TS.P10.D05 Aspen stem cDNA Libra... 121 1e-025
gb|CV252632.1|CV252632 PX0015.B21_H15 PT-X-FL-A-1 Populus t... 121 1e-025
gb|DT500439.1|DT500439 PX0015.BR_H15 PT-X-FL-A-1 Populus tr... 121 1e-025
gb|CA932468.1|CA932468 MTU5CS.P13.D03 Aspen stem cDNA Libra... 117 2e-024
gb|AI165783.1|AI165783 A091p34u Hybrid aspen plasmid librar... 115 7e-024
gb|CV232360.1|CV232360 WS0197.B21_F14 PT-DX-N-A-10 Populus ... 115 7e-024
gb|BP921959.1|BP921959 BP921959 full-length enriched poplar... 113 3e-023
gb|CX184793.1|CX184793 E06_45-16_10.ab1 leaf inoculated wit... 111 1e-022
gb|CA932429.1|CA932429 MTU5CS.P12.H05 Aspen stem cDNA Libra... 109 4e-022
gb|CF119286.1|CF119286 MTU10CS.P15.H03 Aspen stem cDNA Libr... 105 7e-021
gb|AI162726.1|AI162726 A022P54U Hybrid aspen plasmid librar... 101 1e-019
gb|CV248961.1|CV248961 WS01122.B21_I22 PT-P-FL-A-2 Populus ... 100 4e-019
gb|DT472797.1|DT472797 WS01227.BR_C09 PT-GT-FL-A-3 Populus ... 100 4e-019
gb|DT496148.1|DT496148 WS01122.BR_I22 PT-P-FL-A-2 Populus t... 100 4e-019
gb|CV237261.1|CV237261 WS01227.B21.1_C09 PT-GT-FL-A-3 Popul... 98 2e-018
gb|BU897090.1|BU897090 X050H09 Populus wood cDNA library Po... 94 3e-017
gb|CV276415.1|CV276415 WS0179.B21_L10 PTxD-NR-A-8 Populus t... 92 1e-016
gb|CV280883.1|CV280883 WS0138.B21_B11 PTxD-IL-FL-A-4 Populu... 92 1e-016
gb|CX654938.1|CX654938 PO01003A02 Poplar SC cDNA library Po... 92 1e-016
gb|DT503859.1|DT503859 WS0138.BR_B11 PTxD-IL-FL-A-4 Populus... 92 1e-016
gb|CV259716.1|CV259716 WS02012.B21_B10 PTxN-IB-N-A-11 Popul... 84 2e-014
gb|CV269237.1|CV269237 WS0207.B21_L04 PTxN-IB-N-A-11 Populu... 84 2e-014
gb|CX183823.1|CX183823 E11_45-56_09.ab1 leaf inoculated wit... 72 9e-011
gb|BU817250.1|BU817250 UA14CPF12 Populus tremula cambium cD... 68 1e-009
gb|BU829076.1|BU829076 K034P36P Populus apical shoot cDNA l... 68 1e-009
gb|DT470080.1|DT470080 WS01919.C21_M23 PT-DX-N-A-10 Populus... 68 1e-009
gb|CN519667.1|CN519667 GQ0103.B3_I21 GQ010 Populus trichoca... 64 2e-008
gb|CV240955.1|CV240955 WS02510.B21_N04 PT-MB-N-A-15 Populus... 64 2e-008
gb|CX170906.1|CX170906 E05_69-41_09.ab1 leaf inoculated wit... 64 2e-008
gb|CX171268.1|CX171268 B03_69-85_03.ab1 leaf inoculated wit... 64 2e-008
gb|CX174875.1|CX174875 D05_69-4_07.ab1 leaf inoculated with... 64 2e-008
gb|CX175878.1|CX175878 D11_69-91_07.ab1 leaf inoculated wit... 64 2e-008
gb|CX176816.1|CX176816 C09_69-8_05.ab1 leaf inoculated with... 64 2e-008
gb|CX177009.1|CX177009 F02_69-24_12.ab1 leaf inoculated wit... 64 2e-008
gb|CX179377.1|CX179377 D02_45-16_08.ab1 leaf inoculated wit... 64 2e-008
gb|CX179766.1|CX179766 A10_45-31_02.ab1 leaf inoculated wit... 64 2e-008
gb|CX180885.1|CX180885 G12_45-86_14.ab1 leaf inoculated wit... 64 2e-008
gb|CX181489.1|CX181489 A04_45-84_02.ab1 leaf inoculated wit... 64 2e-008
gb|CX182008.1|CX182008 B08_45-16_04.ab1 leaf inoculated wit... 64 2e-008
gb|CX182673.1|CX182673 G10_45-121_14.ab1 leaf inoculated wi... 64 2e-008
gb|CX182705.1|CX182705 A03_45-59_01.ab1 leaf inoculated wit... 64 2e-008
gb|CX184466.1|CX184466 C08_45-46_06.ab1 leaf inoculated wit... 64 2e-008
gb|CX185874.1|CX185874 A11_45-109_01.ab1 leaf inoculated wi... 64 2e-008
gb|CX186941.1|CX186941 A10_45-117_02.ab1 leaf inoculated wi... 64 2e-008
gb|CX187374.1|CX187374 G12_45-5_14.ab1 leaf inoculated with... 64 2e-008
gb|CX187429.1|CX187429 A09_45-39_01.ab1 leaf inoculated wit... 64 2e-008
gb|DT475069.1|DT475069 WS0125.BR_O14 PT-GT-FL-A-3 Populus t... 64 2e-008
gb|CV266174.1|CV266174 WS02029.B21_E22 PTxN-IB-N-A-11 Popul... 62 9e-008
gb|CX178256.1|CX178256 C06_45-79_06.ab1 leaf inoculated wit... 62 9e-008
gb|CX181831.1|CX181831 C06_45-43_06.ab1 leaf inoculated wit... 62 9e-008
gb|BP933158.1|BP933158 BP933158 full-length enriched poplar... 58 1e-006
gb|BU822766.1|BU822766 UB43DPB04 Populus tremula cambium cD... 56 6e-006
gb|CX172401.1|CX172401 G06_69-78_14.ab1 leaf inoculated wit... 56 6e-006
gb|CX179935.1|CX179935 H09_45-26_15.ab1 leaf inoculated wit... 56 6e-006
gb|CX178333.1|CX178333 H07_45-31_15.ab1 leaf inoculated wit... 52 9e-005
gb|CV259040.1|CV259040 WS02010.B21_D08 PTxN-IB-N-A-11 Popul... 50 3e-004
gb|CX182709.1|CX182709 A09_45-3_01.ab1 leaf inoculated with... 48 0.001
gb|BU897499.1|BU897499 X058G07 Populus wood cDNA library Po... 42 0.084
gb|DT507486.1|DT507486 WS02418.BR_G08 PTxD-ICC-N-A-14 Popul... 40 0.33
>dbj|AB041505.1| Populus nigra PnATH mRNA for ABC transporter homolog, complete cds
Length = 2272
Score = 287 bits (145), Expect = 9e-076
Identities = 502/621 (80%)
Strand = Plus / Plus
Query: 575 tgaagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcat 634
|||| ||||| |||||||| ||| | ||||| ||| |||||||||| ||||| |||||
Sbjct: 581 tgaaattggagaaggaagccgaagtcttggcagcaaaggatgatggaggtggagaagctc 640
Query: 635 tggagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctg 694
| || ||| ||||||||||| | || || |||||||| |||||| || || || ||||
Sbjct: 641 ttgatcgtatttatgagcgtttggaggccatggatgcatcaactgctgagaaacgtgctg 700
Query: 695 ctgaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatt 754
|||||||||| | |||||| || ||| |||| ||||||||| |||||||||| |||||
Sbjct: 701 ctgaaattttgtatggtcttgggtttaacaagaaaatgcaagaaaagaaaactcgagatt 760
Query: 755 tctctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaa 814
| ||||| || ||| | ||||| ||||| |||| | || |||| ||||| ||||| |
Sbjct: 761 tttctggtggctggagaatgagaattgcactagctcgggctttgttcatgaacccaacta 820
Query: 815 tccttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaag 874
|||| |||||||||||||| || || ||||| ||||| || || |||||||||||||| |
Sbjct: 821 tcctcttgcttgatgagccaaccaatcatcttgatctagaagcctgtgtctggttggagg 880
Query: 875 agacactgaagaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaa 934
| || ||||||| ||||||||||| || ||||| | ||||| ||||| ||||| | |
Sbjct: 881 aaactttgaagaagtttgaccgcattctagttgtggtctcacattcccaggatttcttga 940
Query: 935 atggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggta 994
|||| || || || |||||||||||||||||||||||||| | || | ||||| ||||
Sbjct: 941 atggtgtctgcacaaacattatccatatgcaaaacaagaaattgaaaatctacactggta 1000
Query: 995 actacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtaca 1054
||| ||||||||||||||| || || || || || ||||| ||||| ||||| || ||||
Sbjct: 1001 acttcgatcagtatgttcagacccgttctgaactggaagaaaatcagatgaaacaataca 1060
Query: 1055 aatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggtt 1114
| ||||||||||| || |||||||| ||||||||||| ||||| || || || ||||| |
Sbjct: 1061 agtgggagcaggatcaaattgcttccatgaaggagtatattgcccgatttgggcatgggt 1120
Query: 1115 ctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgag 1174
| ||||| | ||||| ||||| |||||||| ||||||||||||||||| |||||||| |
Sbjct: 1121 cagcaaaattagctcgccaggcacagagcaaggagaaaactcttgcaaaaatggagcggg 1180
Query: 1175 gtggtctcaccgagaaggttg 1195
|||| || || || |||||||
Sbjct: 1181 gtggacttacagaaaaggttg 1201
Score = 145 bits (73), Expect = 8e-033
Identities = 190/229 (82%)
Strand = Plus / Plus
Query: 1229 atgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaagtttgggtatacac 1288
||||||| || || || ||||| ||||| |||||||| ||||| | ||||| || ||||
Sbjct: 1235 atgttggaaagctcccaccaccggtgcttcagtttgtggaagtaacctttggctacacac 1294
Query: 1289 cagataatctcatatacaagagtcttgactttggagttgatcttgactctagaatcgcat 1348
| ||||||||||| || |||||| ||||||| ||||||||||| |||||||| || ||
Sbjct: 1295 ctgataatctcatctataagagtattgacttcggagttgatctggactctaggattgcgc 1354
Query: 1349 tggttggtcccaatggtgcagggaagagcactcttctgaagcttatgactggtgaccttg 1408
||||||| || |||||||| |||||||| || || |||||||||||||| ||||| | |
Sbjct: 1355 tggttgggccaaatggtgctgggaagagtaccctactgaagcttatgacgggtgatttgg 1414
Query: 1409 ctccattagatggcatggttcggcgccacaatcacctgcgcattgcaca 1457
||| |||||||| ||||||||||| ||||||||| || | ||||||||
Sbjct: 1415 ttcctttagatggtatggttcggcggcacaatcacttgaggattgcaca 1463
Score = 137 bits (69), Expect = 2e-030
Identities = 196/237 (82%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| |||| ||| | || |||||||| |||||| | || |
Sbjct: 1586 caggcaaggcccaggtgatgcccatgaagaacttgtcagatgggcagaggagcagggtga 1645
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||| ||||||||||| || |||||||||| |||||||| ||||| |
Sbjct: 1646 tatttgcttggctggcgtataggcagccccacttgctactgctggatgagccaacaaacc 1705
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| |||||||| |||||||| ||||| |||||| ||||||||| |||||| |||
Sbjct: 1706 atttggatattgagacgattgactctctggccgaggcattgaatgagt-ggatgggggtc 1764
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttggg 1816
|||| | || ||||||||||||||||| || || ||||| || | ||||||||||
Sbjct: 1765 tggttcttgttagccatgatttcaggctcataaatcaggtagcagaggagatttggg 1821
Score = 56.0 bits (28), Expect = 6e-006
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 118 atggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcggctgccaag 177
||||| ||||| ||||||||||||||||| || || |||||||| ||||| || ||||||
Sbjct: 100 atggtttcggaagccagcaagaagaaggctgctcaaaagaaggcggctgctgcggccaag 159
>gb|CK318911.1|CK318911 X9P04g02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 558
Score = 224 bits (113), Expect = 1e-056
Identities = 410/509 (80%)
Strand = Plus / Plus
Query: 949 aacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtat 1008
||||||||||| ||||||| |||||| | || | ||||| |||||||| |||||||||
Sbjct: 13 aacattatccacatgcaaagcaagaaattgaaaatctacactggtaactatgatcagtat 72
Query: 1009 gttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaa 1068
||||| ||||| || || || ||||| || || ||||| ||||||||||||||||||||
Sbjct: 73 gttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgggagcaggat 132
Query: 1069 cagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgct 1128
|||||| |||| ||||||||||| ||||| || || || ||||| || |||||| | |||
Sbjct: 133 cagatttcttccatgaaggagtatattgcccgatttgggcatgggtcagcaaagttagct 192
Query: 1129 cgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccgag 1188
|||||||| |||||||| |||||||||||||| |||||||| || ||||| || || ||
Sbjct: 193 cgtcaggcgcagagcaaggagaaaactcttgctaagatggaacgcggtggacttacagaa 252
Query: 1189 aaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttcctcca 1248
| |||||| || ||| ||||| || || | ||| ||||| || || || || |||
Sbjct: 253 agggttgtgagagaccaggttctggtctttcgctttgttgatgtggggaagctcccacca 312
Query: 1249 cctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaag 1308
|| ||||| |||||||||||||| | ||||| || ||||| ||||| ||||| || |||
Sbjct: 313 cccgtgcttcagtttgttgaagtaatctttggctagacacctgataacctcatttataag 372
Query: 1309 agtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggtgca 1368
| |||||||||||| || ||||| |||||||| | || ||||||| ||||| || ||
Sbjct: 373 aatcttgactttggtgtggatctggactctagggttgcgctggttggccccaacggagct 432
Query: 1369 gggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatggtt 1428
|| ||||| || | ||||||||||||| |||||||| | ||| |||||||||||||||
Sbjct: 433 ggaaagagtaccttgctgaagcttatgatgggtgacctggttcctttagatggcatggtt 492
Query: 1429 cggcgccacaatcacctgcgcattgcaca 1457
|| || |||| |||| || | ||||||||
Sbjct: 493 cgccggcacattcacttgaggattgcaca 521
>gb|BU896248.1|BU896248 X037G10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 725
Score = 218 bits (110), Expect = 7e-055
Identities = 419/522 (80%)
Strand = Plus / Plus
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||| |||||||||||||| ||||| ||||| | || ||| ||||||||||| | ||
Sbjct: 201 ttggcagcacaggatgatggaggtggagaagctcttgatcgtatttatgagcgtttggag 260
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| ||||||| | ||||||||| || || |||||||||||||| |||||||| || |||
Sbjct: 261 gccatggatgtggcaactgcagagaaacgtgctgctgaaattttgtttggtcttggattt 320
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
|||| ||||||||| ||||||||||| |||||| || || |||||| | |||||||||
Sbjct: 321 aacaagcaaatgcaaacaaagaaaactcgagatttttcaggtggttggagaatgaggatt 380
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| ||||| | || |||| ||||| ||||| |||| || ||||||||||| || ||
Sbjct: 381 gcattagctcgggctttgttcatgaacccaactgtcctcttacttgatgagccaaccaat 440
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| || || || || |||||||||||||| || || | ||||| ||||| |||||
Sbjct: 441 catcttgacctcgaagcctgtgtctggttggaggaaactttaaagaactttgaacgcatt 500
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|| ||||| | || |||||||| ||||| | ||||| ||||| || |||||||||||
Sbjct: 501 ctagttgtggtttctcactcccaggatttcttgaatggtgtgtgcacaaacattatccac 560
Query: 961 atgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgc 1020
||||||| || ||| | || | ||||| |||||||| |||||||||||||| |||||
Sbjct: 561 atgcaaagcaggaaattgaaaatctacactggtaactatgatcagtatgttcagactcgt 620
Query: 1021 tccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttca 1080
|| || || ||||| || || ||||| |||||||||||||||||||| |||||| ||
Sbjct: 621 tctgaactggaagaaaaccagatgaaacagtacaaatgggagcaggatcagatttctggc 680
Query: 1081 atgaaggagtacattgctcgcttcggtcatggttctgcaaag 1122
||||||||||| ||||| || || || ||||| || ||||||
Sbjct: 681 atgaaggagtatattgcccgatttgggcatgggtcagcaaag 722
Score = 42.1 bits (21), Expect = 0.084
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 514 gagattgaagcttctgacatgtctgcact 542
||||| |||||||||||||||||| ||||
Sbjct: 114 gagatcgaagcttctgacatgtcttcact 142
>gb|DV466465.1|DV466465 MTUNUL1.P6.A01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 815
Score = 212 bits (107), Expect = 4e-053
Identities = 371/459 (80%)
Strand = Plus / Plus
Query: 985 tacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatg 1044
||||| |||||||| |||||||||||||| ||||| || || || ||||| || || |||
Sbjct: 38 tacactggtaactatgatcagtatgttcagactcgttctgaactggaagaaaaccagatg 97
Query: 1045 aagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttc 1104
|| |||||||||||||||||||| |||||| |||| ||||||||||| ||||| || ||
Sbjct: 98 aaacagtacaaatgggagcaggatcagatttcttccatgaaggagtatattgcccgattt 157
Query: 1105 ggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaag 1164
|| ||||| || || ||| | ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 158 gggcatgggtcagcgaagttagctcgtcaggcgcagagcaaggagaaaactcttgctaag 217
Query: 1165 atggagcgaggtggtctcaccgagaaggttgttagggacagagttctagtgttcaggttt 1224
||||| || ||||| || || || | |||||| || ||| ||||| || || | |||
Sbjct: 218 atggaacgcggtggacttacagaaagggttgtgagagaccaggttctggtctttcgcttt 277
Query: 1225 acagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaagtttgggtat 1284
||||| || || || || ||||| ||||| |||||||||||||| | ||||| ||
Sbjct: 278 gttgatgtggggaagctcccaccacccgtgcttcagtttgttgaagtaacctttggctac 337
Query: 1285 acaccagataatctcatatacaagagtcttgactttggagttgatcttgactctagaatc 1344
||||| ||||| ||||| || |||| |||||||||||| || ||||| |||||||| |
Sbjct: 338 acacctgataacctcatttataagaatcttgactttggtgtggatctggactctagggtt 397
Query: 1345 gcattggttggtcccaatggtgcagggaagagcactcttctgaagcttatgactggtgac 1404
|| ||||||| ||||| || || || ||||| || | |||||||||||||| ||||||
Sbjct: 398 gcgctggttggccccaacggagctggaaagagtaccttgctgaagcttatgacgggtgac 457
Query: 1405 cttgctccattagatggcatggttcggcgccacaatcac 1443
| | ||| ||||||||||||||||| || |||||||||
Sbjct: 458 ttggttcctttagatggcatggttcgccggcacaatcac 496
Score = 117 bits (59), Expect = 2e-024
Identities = 146/175 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 633 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 692
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 693 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 752
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatgg 1754
||||||| ||||||||||| ||||||||||| |||||| |||| |||||||||||
Sbjct: 753 atttggatattgagaccatcgactccctggcagaggcattgaaagagtgggatgg 807
>gb|CX174260.1|CX174260 D02_69-34_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 664
Score = 204 bits (103), Expect = 1e-050
Identities = 500/631 (79%), Gaps = 1/631 (0%)
Strand = Plus / Plus
Query: 797 tgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgagg 856
|||| ||||| ||||| |||| || ||||||||||| || || ||||| || || || |
Sbjct: 35 tgttcatgaacccaactgtcctcttacttgatgagccaaccaatcatcttgacctcgaag 94
Query: 857 cttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcac 916
| |||||||||||||| || || | ||||| ||||| ||||| || ||||| | || |
Sbjct: 95 cctgtgtctggttggaggaaactttaaagaactttgaacgcattctagttgtggtttctc 154
Query: 917 actcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagc 976
|||| || ||||| | ||||| || || || ||||||||||| ||||||| ||||||
Sbjct: 155 actctcaggatttcttgaatggtgtctgcacaaacattatccacatgcaaagcaagaaat 214
Query: 977 tcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagaga 1036
| || | ||||| |||||||| |||||||||||||| ||||| || || || ||||| |
Sbjct: 215 tgaaaatctacactggtaactatgatcagtatgttcagactcgttctgaactggaagaaa 274
Query: 1037 atcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattg 1096
| || ||||| |||||||||||||||||||| |||||| |||| ||||||||||| ||||
Sbjct: 275 accagatgaaacagtacaaatgggagcaggatcagatttcttccatgaaggagtatattg 334
Query: 1097 ctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactc 1156
| || || || ||||| || |||||| | ||||||||||| |||||||| ||||||||||
Sbjct: 335 cccgatttgggcatgggtcagcaaagttagctcgtcaggcgcagagcaaggagaaaactc 394
Query: 1157 ttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagtgt 1216
|||| |||||||| || ||||| || || || | |||||| || ||| ||||| || |
Sbjct: 395 ttgctaagatggaacgcggtggacttacagaaagggttgtgagagaccaggttctggtct 454
Query: 1217 tcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaagt 1276
| | ||| ||||| || || || || ||||| ||||| |||||||||||||| | |
Sbjct: 455 ttcgctttgttgatgtggggaagctcccaccacccgtgcttcagtttgttgaagtaacct 514
Query: 1277 ttgggtatacaccagataatctcatatacaagagtcttgactttggagttgatcttgact 1336
|||| || ||||| ||||| ||||| || |||| |||||||||||| || ||| | ||||
Sbjct: 515 ttggctacacacctgataacctcatttataagaatcttgactttggtgtggatttggact 574
Query: 1337 ctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctgaagcttatga 1396
|||| | || ||||||| ||| | || || || ||||| || | |||||||||||||
Sbjct: 575 ctagggttgcgctggttgg-ccccacggagctggaaagagtaccttgctgaagcttatga 633
Query: 1397 ctggtgaccttgctccattagatggcatggt 1427
| |||||| | | ||| ||||||||||||||
Sbjct: 634 cgggtgacttggttcctttagatggcatggt 664
>gb|AJ776542.1|AJ776542 AJ776542 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400014H09F1, mRNA sequence
Length = 506
Score = 194 bits (98), Expect = 9e-048
Identities = 311/382 (81%)
Strand = Plus / Plus
Query: 797 tgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgagg 856
|||| ||||| ||||| |||| || ||||||||||| || || ||||| || ||||| |
Sbjct: 6 tgttcatgaacccaactgtcctcttacttgatgagccaaccaatcatcttgaccttgaag 65
Query: 857 cttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcac 916
| |||||||||||||| || || | ||||| ||||| ||||| || ||||| | || |
Sbjct: 66 cctgtgtctggttggaggaaactttaaagaactttgaacgcattctagttgtggtttctc 125
Query: 917 actcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagc 976
|||| || ||||| | ||||| || || || ||||||||||| ||||||||||||||
Sbjct: 126 actctcaggatttcttgaatggtgtctgcacaaacattatccacatgcaaaacaagaaat 185
Query: 977 tcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagaga 1036
| || | ||||| |||||||| |||||||||||||| ||||| || || || ||||| |
Sbjct: 186 tgaaaatctacactggtaactatgatcagtatgttcagactcgttctgaactggaagaaa 245
Query: 1037 atcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattg 1096
| || ||||| |||||||||||||||||||| |||||| |||| ||||||||||| ||||
Sbjct: 246 accagatgaaacagtacaaatgggagcaggatcagatttcttccatgaaggagtatattg 305
Query: 1097 ctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactc 1156
| || || || ||||| || |||||| | ||||||||||| |||||||| ||||||||||
Sbjct: 306 cccgatttgggcatgggtcagcaaagttagctcgtcaggcgcagagcaaggagaaaactc 365
Query: 1157 ttgcaaagatggagcgaggtgg 1178
|||| || ||||| || |||||
Sbjct: 366 ttgctaaaatggaacgtggtgg 387
>gb|CV266019.1|CV266019 WS02028.B21_O09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_O09 3', mRNA sequence
Length = 786
Score = 180 bits (91), Expect = 1e-043
Identities = 322/399 (80%)
Strand = Plus / Minus
Query: 797 tgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgagg 856
|||| ||||| ||||| |||| || ||||||||||| || || ||||| || || || |
Sbjct: 754 tgttcatgaacccaactgtcctcttacttgatgagccaaccaatcatcttgacctcgaag 695
Query: 857 cttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcac 916
| |||||||||||||| || || | ||||| ||||| ||||| || ||||| | || |
Sbjct: 694 cctgtgtctggttggaggaaactttaaagaactttgaacgcattctagttgtggtttctc 635
Query: 917 actcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagc 976
|||| || ||||| | ||||| || || || ||||||||||| ||||||| ||||||
Sbjct: 634 actctcaggatttcttgaatggtgtctgcacaaacattatccacatgcaaagcaagaaat 575
Query: 977 tcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagaga 1036
| || | ||||| |||||||| |||||||||||||| ||||| || || || ||||| |
Sbjct: 574 tgaaaatctacactggtaactatgatcagtatgttcagactcgttctgaactggaagaaa 515
Query: 1037 atcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattg 1096
| || ||||| |||||||||||||||||||| |||||| |||| ||||||||||| ||||
Sbjct: 514 accagatgaaacagtacaaatgggagcaggatcagatttcttccatgaaggagtatattg 455
Query: 1097 ctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactc 1156
| || || || ||||| || |||||| | ||||||||||| |||||||| |||||||| |
Sbjct: 454 cccgatttgggcatgggtcagcaaagttagctcgtcaggcgcagagcaaggagaaaaccc 395
Query: 1157 ttgcaaagatggagcgaggtggtctcaccgagaaggttg 1195
|||| |||||||| || ||||| || || || |||||||
Sbjct: 394 ttgctaagatggaacgcggtggacttacagaaaaggttg 356
Score = 107 bits (54), Expect = 2e-021
Identities = 162/198 (81%)
Strand = Plus / Minus
Query: 1246 ccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatac 1305
||||| ||||| |||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct: 305 ccacccgtgcttcagtttgttgaagtaacctttggctacacacctgataacctcatttat 246
Query: 1306 aagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggt 1365
|||| |||||||||||| || ||||| |||||||| | || ||||||| ||||| ||
Sbjct: 245 aagaatcttgactttggtgtggatctagactctagggttgcgctggttggccccaacgga 186
Query: 1366 gcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatg 1425
|| || ||||| || | |||||||||||||| |||||| | | ||| ||||||||||||
Sbjct: 185 gctggaaagagtaccttgctgaagcttatgacgggtgacttggttcctttagatggcatg 126
Query: 1426 gttcggcgccacaatcac 1443
||||| || |||||||||
Sbjct: 125 gttcgccggcacaatcac 108
>gb|DT508799.1|DT508799 WS02421.BR_P13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_P13 5', mRNA sequence
Length = 843
Score = 178 bits (90), Expect = 6e-043
Identities = 309/382 (80%)
Strand = Plus / Plus
Query: 797 tgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgagg 856
|||| ||||| ||||| |||| || ||||||||||| || || ||||| || || || |
Sbjct: 23 tgttcatgaacccaactgtcctcttacttgatgagccaaccaatcatcttgacctcgaag 82
Query: 857 cttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcac 916
| |||||||||||||| || || | ||||| ||||| ||||| || ||||| | || |
Sbjct: 83 cctgtgtctggttggaggaaactttaaagaactttgaacgcattctagttgtggtttctc 142
Query: 917 actcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagc 976
|||| || ||||| | ||||| || || || ||||||||||| ||||||| ||||||
Sbjct: 143 actctcaggatttcttgaatggtgtctgcacaaacattatccacatgcaaagcaagaaat 202
Query: 977 tcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagaga 1036
| || | ||||| |||||||| |||||||||||||| ||||| || || || ||||| |
Sbjct: 203 tgaaaatctacactggtaactatgatcagtatgttcagactcgttctgaactggaagaaa 262
Query: 1037 atcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacattg 1096
| || ||||| |||||||||||||||||||| |||||| |||| ||||||||||| ||||
Sbjct: 263 accagatgaaacagtacaaatgggagcaggatcagatttcttccatgaaggagtatattg 322
Query: 1097 ctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactc 1156
| || || || ||||| || |||||| | ||||||||||| |||||||| |||||||| |
Sbjct: 323 cccgatttgggcatgggtcagcaaagttagctcgtcaggcgcagagcaaggagaaaaccc 382
Query: 1157 ttgcaaagatggagcgaggtgg 1178
|||| |||||||| || |||||
Sbjct: 383 ttgctaagatggaacgcggtgg 404
Score = 107 bits (54), Expect = 2e-021
Identities = 162/198 (81%)
Strand = Plus / Plus
Query: 1246 ccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatac 1305
||||| ||||| |||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct: 472 ccacccgtgcttcagtttgttgaagtaacctttggctacacacctgataacctcatttat 531
Query: 1306 aagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggt 1365
|||| |||||||||||| || ||||| |||||||| | || ||||||| ||||| ||
Sbjct: 532 aagaatcttgactttggtgtggatctggactctagggttgcgctggttggccccaacgga 591
Query: 1366 gcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatg 1425
|| || ||||| || | |||||||||||||| |||||| | | ||| ||||||||||||
Sbjct: 592 gctggaaagagtaccttgctgaagcttatgacgggtgacttggttcctttagatggcatg 651
Query: 1426 gttcggcgccacaatcac 1443
||||| || |||||||||
Sbjct: 652 gttcgccggcacaatcac 669
>gb|CV238256.1|CV238256 WS0125.B21_O14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0125_O14
3', mRNA sequence
Length = 646
Score = 176 bits (89), Expect = 2e-042
Identities = 206/245 (84%)
Strand = Plus / Minus
Query: 934 aatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggt 993
|||||||| || || ||||||||||| ||||||| |||||| | || | ||||| |||
Sbjct: 614 aatggagtctgcacaaacattatccacatgcaaagcaagaaattgaaaatctacactggt 555
Query: 994 aactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtac 1053
||||| |||||||||||||| ||||| || || || ||||| || || ||||| ||||||
Sbjct: 554 aactatgatcagtatgttcagactcgttctgaactggaagaaaaccagatgaaacagtac 495
Query: 1054 aaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggt 1113
|||||||||||||| |||||| |||| ||||||||||| ||||| || || || |||||
Sbjct: 494 aaatgggagcaggatcagatttcttccatgaaggagtatattgcccgatttgggcatggg 435
Query: 1114 tctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcga 1173
|| |||||| | ||||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 434 tcagcaaagttagctcgtcaggcgcagagcaaggagaaaactcttgctaagatggaacgc 375
Query: 1174 ggtgg 1178
|||||
Sbjct: 374 ggtgg 370
Score = 107 bits (54), Expect = 2e-021
Identities = 162/198 (81%)
Strand = Plus / Minus
Query: 1246 ccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatac 1305
||||| ||||| |||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct: 302 ccacccgtgcttcagtttgttgaagtaacctttggctacacacctgataacctcatttat 243
Query: 1306 aagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggt 1365
|||| |||||||||||| || ||||| |||||||| | || ||||||| ||||| ||
Sbjct: 242 aagaatcttgactttggtgtggatctggactctagggttgcgctggttggccccaacgga 183
Query: 1366 gcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatg 1425
|| || ||||| || | |||||||||||||| |||||| | | ||| ||||||||||||
Sbjct: 182 gctggaaagagtaccttgctgaagcttatgacgggtgacttggttcctttagatggcatg 123
Query: 1426 gttcggcgccacaatcac 1443
||||| || |||||||||
Sbjct: 122 gttcgccggcacaatcac 105
>gb|CN524590.1|CN524590 GQ015M17.T3_H05 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M17_H05 5', mRNA sequence
Length = 822
Score = 174 bits (88), Expect = 9e-042
Identities = 316/392 (80%)
Strand = Plus / Plus
Query: 1052 acaaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatg 1111
|||||||||||||||| |||||| |||| ||||||||||| ||||| || || || ||||
Sbjct: 39 acaaatgggagcaggatcagatttcttccatgaaggagtatattgcccgatttgggcatg 98
Query: 1112 gttctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagc 1171
| || |||||| | ||||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct: 99 ggtcagcaaagttagctcgtcaggcgcagagcaaggagaaaactcttgctaagatggaac 158
Query: 1172 gaggtggtctcaccgagaaggttgttagggacagagttctagtgttcaggtttacagatg 1231
| ||||| || || || | |||||| || ||| ||||| || || | ||| ||||
Sbjct: 159 gcggtggacttacagaaagggttgtgagagaccaggttctggtctttcgctttgttgatg 218
Query: 1232 ttggcaaacttcctccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccag 1291
| || || || || ||||| ||||| |||||||||||||| | ||||| || ||||| |
Sbjct: 219 tggggaagctcccaccacccgtgcttcagtttgttgaagtaacctttggctacacacctg 278
Query: 1292 ataatctcatatacaagagtcttgactttggagttgatcttgactctagaatcgcattgg 1351
|||| ||||| || |||| |||||||||||| || ||||| |||||||| | || |||
Sbjct: 279 ataacctcatttataagaatcttgactttggtgtggatctggactctagggttgcgctgg 338
Query: 1352 ttggtcccaatggtgcagggaagagcactcttctgaagcttatgactggtgaccttgctc 1411
|||| ||||| || || || ||||| || | |||||||||||||| |||||| | | ||
Sbjct: 339 ttggccccaacggagctggaaagagtaccttgctgaagcttatgacgggtgacttggttc 398
Query: 1412 cattagatggcatggttcggcgccacaatcac 1443
| ||||||||||||||||| || |||||||||
Sbjct: 399 ctttagatggcatggttcgccggcacaatcac 430
Score = 109 bits (55), Expect = 4e-022
Identities = 168/208 (80%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 567 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 626
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 627 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 686
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| ||||||||||| | |||| ||||||||||| |||
Sbjct: 687 atttggatattgagaccatcgactccctggcnnnnnnattgaaagagtgggatgggggtc 746
Query: 1760 tggtcttggtgagccatgatttcaggct 1787
|||| | || |||||||||||||||||
Sbjct: 747 tggtncttgttagccatgatttcaggct 774
>gb|CA927277.1|CA927277 MTU6CR.P7.A11 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 673
Score = 172 bits (87), Expect = 3e-041
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 642 caggcaaggcccaggtgatgcccatgagtaatntgtcagatgggcagaggagcagggtga 583
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 582 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 523
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 522 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 463
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 462 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 403
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 402 gtgagaatca 393
>gb|BU808826.1|BU808826 UL50PD12 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 453
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 65 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 124
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 125 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 184
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 185 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 244
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 245 tggttctcgttagccatgatttcaggctcataaaccaggtggcgcaggagatatgggtat 304
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 305 gtgagaatca 314
>gb|CA926673.1|CA926673 MTU6CR.P17.G12 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 691
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 642 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 583
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 582 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 523
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 522 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 463
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 462 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 403
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 402 gtgagaatca 393
>gb|CA933473.1|CA933473 MTU5CS.P8.E08 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 647
Score = 170 bits (86), Expect = 1e-040
Identities = 206/246 (83%)
Strand = Plus / Minus
Query: 1584 aaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctt 1643
|||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || || ||
Sbjct: 638 aaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtgatatt 579
Query: 1644 tgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcattt 1703
||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |||||
Sbjct: 578 tgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaaccattt 519
Query: 1704 ggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggt 1763
||| ||||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||
Sbjct: 518 ggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtctggt 459
Query: 1764 cttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtga 1823
| || ||||||||||||||||| || |||||||| || || ||||| ||||| |||||
Sbjct: 458 tctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtatgtga 399
Query: 1824 gaatca 1829
||||||
Sbjct: 398 gaatca 393
>gb|CF119061.1|CF119061 MTU10CS.P13.A02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 794
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 199 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 258
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 259 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 318
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 319 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 378
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 379 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 438
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 439 gtgagaatca 448
Score = 40.1 bits (20), Expect = 0.33
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| ||||| | | ||| | |||||||||||||| || |||||||||
Sbjct: 3 ctgaagcttatgacgggtgagttggttccttcggatggcatggttcgccggcacaatcac 62
>gb|CF119396.1|CF119396 MTU10CS.P1.C12 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 580
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 199 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 258
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 259 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 318
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 319 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 378
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 379 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 438
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 439 gtgagaatca 448
Score = 40.1 bits (20), Expect = 0.33
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| ||||| | | ||| | |||||||||||||| || |||||||||
Sbjct: 3 ctgaagcttatgacgggtgagttggttccttcggatggcatggttcgccggcacaatcac 62
>gb|CF119421.1|CF119421 MTU10CS.P1.F06 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 650
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 642 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 583
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 582 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 523
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 522 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 463
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 462 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 403
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 402 gtgagaatca 393
>gb|CF119568.1|CF119568 MTU10CS.P3.E06 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 587
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 199 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtaa 258
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 259 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 318
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 319 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 378
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 379 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 438
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 439 gtgagaatca 448
Score = 48.1 bits (24), Expect = 0.001
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| ||||| | | ||| || |||||||||||||| || |||||||||
Sbjct: 3 ctgaagcttatgacgggtgagttggttcctttggatggcatggttcgccggcacaatcac 62
>gb|CK097968.1|CK097968 UBUF11_EMPTY8.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UBUF11_EMPTY8 3', mRNA sequence
Length = 754
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 532 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 473
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 472 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 413
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 412 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 353
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 352 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 293
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 292 gtgagaatca 283
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| |||||| || | | ||||||||||||||||| || |||||||||
Sbjct: 726 ctgaagcttatgacgggtgac--tggttccttagatggcatggttcgccggcacaatcac 669
>gb|CN519616.1|CN519616 GQ0104.B3_J07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_J07 5', mRNA sequence
Length = 823
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 135 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 194
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 195 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 254
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 255 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 314
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 315 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 374
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 375 gtgagaatca 384
>gb|CV239716.1|CV239716 WS0233.B21_E06 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_E06
3', mRNA sequence
Length = 728
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 647 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 588
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 587 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 528
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 527 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 468
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 467 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 408
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 407 gtgagaatca 398
>gb|CV239806.1|CV239806 WS0233.B21_I14 PT-MB-A-13 Populus trichocarpa cDNA clone WS0233_I14
3', mRNA sequence
Length = 714
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 687 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 628
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 627 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 568
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 567 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 508
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 507 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 448
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 447 gtgagaatca 438
>gb|CV239968.1|CV239968 WS0234.B21_A07 PT-MB-A-13 Populus trichocarpa cDNA clone WS0234_A07
3', mRNA sequence
Length = 705
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 647 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 588
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 587 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 528
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 527 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 468
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 467 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 408
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 407 gtgagaatca 398
>gb|CV245806.1|CV245806 WS0259.B21_G23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0259_G23
3', mRNA sequence
Length = 846
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 779 caggcaaggcacaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 720
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 719 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 660
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 659 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 600
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 599 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 540
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 539 gtgagaatca 530
>gb|CV262832.1|CV262832 WS0202.B21_K03 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_K03 3', mRNA sequence
Length = 902
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 709 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 650
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 649 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 590
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 589 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 530
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 529 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 470
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 469 gtgagaatca 460
Score = 60.0 bits (30), Expect = 4e-007
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 1386 gaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||| |||||| ||| ||| ||||||||||||||||| || |||||||||
Sbjct: 902 gaagcttatgacgggtgac-ttgttcctttagatggcatggttcgccggcacaatcac 846
>gb|CV283856.1|CV283856 WS0188.B21_H15 PTxD-IL-N-A-9 Populus trichocarpa x Populus deltoides
cDNA clone WS0188_H15 3', mRNA sequence
Length = 806
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 131 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 190
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 191 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 250
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 251 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 310
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 311 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 370
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 371 gtgagaatca 380
>gb|CX172210.1|CX172210 G10_69-76_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 703
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 683 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 624
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 623 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 564
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 563 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 504
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 503 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 444
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 443 gtgagaatca 434
>gb|CX178489.1|CX178489 F11_45-27_11.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 622
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 220 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 279
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 280 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 339
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 340 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 399
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 400 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 459
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 460 gtgagaatca 469
Score = 63.9 bits (32), Expect = 2e-008
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| |||||| | | ||| ||||||||||||||||| || |||||||||
Sbjct: 24 ctgaagcttatgacgggtgacttggttcctttagatggcatggttcgccggcacaatcac 83
>gb|CX181819.1|CX181819 E11_45-14_09.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 580
Score = 170 bits (86), Expect = 1e-040
Identities = 194/230 (84%)
Strand = Plus / Plus
Query: 949 aacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtat 1008
||||||||||| ||||||| |||||| | || | ||||| |||||||| |||||||||
Sbjct: 44 aacattatccacatgcaaagcaagaaattgaaaatctacactggtaactatgatcagtat 103
Query: 1009 gttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaa 1068
||||| ||||| || || || ||||| || || ||||| ||||||||||||||||||||
Sbjct: 104 gttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgggagcaggat 163
Query: 1069 cagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgct 1128
|||||| |||| ||||||||||| ||||| || || || ||||| || |||||| | |||
Sbjct: 164 cagatttcttccatgaaggagtatattgcccgatttgggcatgggtcagcaaagttagct 223
Query: 1129 cgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtgg 1178
|||||||| |||||||| |||||||||||||| |||||||| || |||||
Sbjct: 224 cgtcaggcgcagagcaaggagaaaactcttgctaagatggaacgcggtgg 273
>gb|DT513408.1|DT513408 WS02421.B21_P13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_P13 3', mRNA sequence
Length = 917
Score = 170 bits (86), Expect = 1e-040
Identities = 209/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 713 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 654
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 653 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 594
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 593 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 534
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 533 tggttcttgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 474
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 473 gtgagaatca 464
Score = 44.1 bits (22), Expect = 0.021
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatg 1425
|||||||||||||| |||||| | | ||| ||||||||||||
Sbjct: 909 ctgaagcttatgacgggtgacttggttcctttagatggcatg 868
>gb|DT492497.1|DT492497 WS02550.C21_O09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_O09 3', mRNA sequence
Length = 865
Score = 167 bits (84), Expect = 2e-039
Identities = 288/356 (80%)
Strand = Plus / Plus
Query: 823 cttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactg 882
||||||||||| || || ||||| || || || || |||||||||||||| || || |
Sbjct: 72 cttgatgagccaaccaatcatcttgacctcgaagcctgtgtctggttggaggaaacttta 131
Query: 883 aagaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtg 942
||||| ||||| ||||| || ||||| | || ||||| || ||||| | ||||| ||
Sbjct: 132 aagaactttgaacgcattctagttgtggtttctcactctcaggatttcttgaatggtgtc 191
Query: 943 tgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgat 1002
|| || ||||||||||| ||||||| |||||| | || | ||||| |||||||| |||
Sbjct: 192 tgcacaaacattatccacatgcaaagcaagaaattgaaaatctacactggtaactatgat 251
Query: 1003 cagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggag 1062
||||||||||| ||||| || || || ||||| || || ||||| ||||||||||| |||
Sbjct: 252 cagtatgttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgtgag 311
Query: 1063 caggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaag 1122
||||| |||||| |||| ||||||||||| ||||| || || || ||||| || ||||||
Sbjct: 312 caggatcagatttcttccatgaaggagtatattgcccgatttgggcatgggtcagcaaag 371
Query: 1123 cttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtgg 1178
| ||||||||||| |||||||| |||||||| ||||| |||||||| || |||||
Sbjct: 372 ttagctcgtcaggcgcagagcaaggagaaaacccttgctaagatggaacgcggtgg 427
Score = 99.6 bits (50), Expect = 4e-019
Identities = 161/198 (81%)
Strand = Plus / Plus
Query: 1246 ccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatac 1305
||||| ||||| |||||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct: 495 ccacccgtgcttcagtttgttgaagtaacctttggctacacacctgataacctcatttat 554
Query: 1306 aagagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggt 1365
|||| |||||||||||| || ||||| |||||||| | || ||||||| ||||| ||
Sbjct: 555 aagaatcttgactttggtgtggatctggactctagggttgcgctggttggccccaacgga 614
Query: 1366 gcagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatg 1425
|| || ||||| || | |||||||||||||| ||||| | | ||| ||||||||||||
Sbjct: 615 gctggaaagagtaccttgctgaagcttatgacgggtgatttggttcctttagatggcatg 674
Query: 1426 gttcggcgccacaatcac 1443
||||| || |||||||||
Sbjct: 675 gttcgccggcacaatcac 692
>gb|CA930214.1|CA930214 MTU2CA.P8.F06 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 697
Score = 165 bits (83), Expect = 8e-039
Identities = 335/419 (79%)
Strand = Plus / Minus
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||| |||||||||||||| ||||| ||||| | || ||| ||||||||||| | ||
Sbjct: 449 ttggcggcacaggatgatggaggtggagaagctcttgatcgtatttatgagcgtttggag 390
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| ||||||| | ||||||||| || || |||||||||||||| |||||||| || |||
Sbjct: 389 gccatggatgtggcaactgcagagaaacgtgctgctgaaattttgtttggtcttggattt 330
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
|||| ||||||||| ||||||||||| |||||| || || || ||| | |||||||||
Sbjct: 329 aacaagcaaatgcaaacaaagaaaactcgagatttttcaggtggctggagaatgaggatt 270
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| ||||| | || |||| ||||| ||||| |||| || ||||||||||| | ||
Sbjct: 269 gcattagctcgggctttgttcatgaacccaactgtcctcttacttgatgagccagccaat 210
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| || || || || |||||||||||||| || || | ||||| ||||| |||||
Sbjct: 209 catcttgacctcgaagcctgtgtctggttggaggaaactttaaagaactttgaacgcatt 150
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|| ||||| | || ||||| |||||||| | ||||| ||||| || |||||||||||
Sbjct: 149 ctggttgtggtttctcactctcaagatttcttgaatggtgtgtgcacaaacattatccac 90
Query: 961 atgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcg 1019
||||||| |||||| | || | ||||| |||||||| |||||||||||||| |||||
Sbjct: 89 atgcaaagcaagaaattgaaaatctacactggtaactatgatcagtatgttcagactcg 31
Score = 67.9 bits (34), Expect = 1e-009
Identities = 136/170 (80%)
Strand = Plus / Minus
Query: 373 gattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgt 432
|||||||| ||||||| ||||| || || ||||| || || ||||| |||||||| |||
Sbjct: 677 gattctgagctggagctaaactatggcagacgatatggattacttggtttgaatggatgt 618
Query: 433 ggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatg 492
|| ||||| || || || | |||||||| || |||||||||| || || || ||||||
Sbjct: 617 gggaaatcaacactcctagctgcaatagggtgtcgagaacttccaattccagagcacatg 558
Query: 493 gacatataccatctaagccatgagattgaagcttctgacatgtctgcact 542
|||||||| || || | | ||||| |||||||||||||||||| ||||
Sbjct: 557 gacatatatcacctcaccagggagatcgaagcttctgacatgtcttcact 508
>gb|CA932230.1|CA932230 MTU5CS.P10.C10 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 704
Score = 163 bits (82), Expect = 3e-038
Identities = 208/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 641 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 582
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| || |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 581 tatttgcttgactggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 522
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 521 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 462
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 461 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 402
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 401 gtgagaatca 392
>gb|CA932897.1|CA932897 MTU5CS.P18.H09 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 696
Score = 163 bits (82), Expect = 3e-038
Identities = 208/250 (83%)
Strand = Plus / Minus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||| | | || |
Sbjct: 642 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggaccagggtaa 583
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 582 tatttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 523
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 522 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 463
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgt 1819
|||| | || ||||||||||||||||| || |||||||| || || ||||| ||||| |
Sbjct: 462 tggttctcgttagccatgatttcaggctcataaaccaggtagcgcaggagatatgggtat 403
Query: 1820 gtgagaatca 1829
||||||||||
Sbjct: 402 gtgagaatca 393
>gb|BP925546.1|BP925546 BP925546 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-047_P10.f 5', mRNA sequence
Length = 320
Score = 163 bits (82), Expect = 3e-038
Identities = 193/230 (83%)
Strand = Plus / Plus
Query: 949 aacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtat 1008
||||||||||| ||||||| |||||| | || | ||||| |||||||| |||||||||
Sbjct: 32 aacattatccacatgcaaagcaagaaattgaaaatctacactggtaactatgatcagtat 91
Query: 1009 gttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaa 1068
||||| ||||| || || || ||||| || || ||||| ||||||||||||||||||||
Sbjct: 92 gttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgggagcaggat 151
Query: 1069 cagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgct 1128
|||||| |||| ||||||||||| ||||| || || || ||||| || |||||| | |||
Sbjct: 152 cagatttcttccatgaaggagtatattgcccgatttgggcatgggtcagcaaagttagct 211
Query: 1129 cgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtgg 1178
|||||||| ||||||| |||||||||||||| |||||||| || |||||
Sbjct: 212 cgtcaggcgcagagcagggagaaaactcttgctaagatggaacgcggtgg 261
>gb|BU814034.1|BU814034 N024B09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 450
Score = 161 bits (81), Expect = 1e-037
Identities = 324/405 (80%)
Strand = Plus / Plus
Query: 763 ggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttg 822
|||||| | ||||||||||| ||||| | || |||| ||||| ||||| |||| ||
Sbjct: 24 ggttggagaatgaggattgcattagctcgggctttgttcatgaacccaactgtcctctta 83
Query: 823 cttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactg 882
||||||||||| || || ||||| || || || || |||||||||||||| || || |
Sbjct: 84 cttgatgagccaaccaatcatcttgacctcgaagcctgtgtctggttggaggaaacttta 143
Query: 883 aagaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtg 942
||||| ||||| ||||| || ||||| | || |||||||| ||||| | ||||| |||
Sbjct: 144 aagaactttgaacgcattctagttgtggtttctcactcccaggatttcttgaatggtgtg 203
Query: 943 tgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgat 1002
|| || ||||||||||| ||||||| || ||| | || | ||||| |||||||| |||
Sbjct: 204 tgcacaaacattatccacatgcaaagcaggaaattgaaaatctacactggtaactatgat 263
Query: 1003 cagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggag 1062
||||||||||| ||||| || || || ||||| || || ||||| |||||||||||||||
Sbjct: 264 cagtatgttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgggag 323
Query: 1063 caggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaag 1122
||||| || ||| || ||||||||||| ||||| || || || ||||| || |||||
Sbjct: 324 caggatcacatttctggcatgaaggagtatattgcccgatttgggcatgggtcaccaaag 383
Query: 1123 cttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatg 1167
| ||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 384 ttagctcgtcaggcgcagagcaaggagaaaactcttgctaagatg 428
>gb|BU885895.1|BU885895 R037G02 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 412
Score = 159 bits (80), Expect = 5e-037
Identities = 329/412 (79%)
Strand = Plus / Plus
Query: 645 ttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgctgaaatttt 704
|||||||||| | || || ||||||| | ||||||||| || || ||||||||||||||
Sbjct: 1 ttatgagcgtttggaggccatggatgtggcaactgcagagaaacgtgctgctgaaatttt 60
Query: 705 atttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttctctggagg 764
|||||||| || ||| |||| ||||||||| ||||||||||| |||||| || || ||
Sbjct: 61 gtttggtcttggatttaacaagcaaatgcaaacaaagaaaactcgagatttttcaggtgg 120
Query: 765 ttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatccttttgct 824
|||| | ||||||||||| ||||| | || |||| ||||| ||||| |||| || ||
Sbjct: 121 ttggagaatgaggattgcattagctcgggctttgttcatgaacccaactgtcctcttact 180
Query: 825 tgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagagacactgaa 884
||||||||| || || ||||| || || || || |||||||||||||| || || | ||
Sbjct: 181 tgatgagccaaccaatcatcttgacctcgaagcctgtgtctggttggaggaaactttaaa 240
Query: 885 gaaatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtgtg 944
||| ||||| ||||| || ||||| | || |||||||| ||||| | ||||| |||||
Sbjct: 241 gaactttgaacgcattctagttgtggtttctcactcccaggatttcttgaatggtgtgtg 300
Query: 945 tactaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatca 1004
|| ||||||||||| ||||||| || ||| | || | ||||| |||||||| |||||
Sbjct: 301 cacaaacattatccacatgcaaagcaggaaattgaaaatctacactggtaactatgatca 360
Query: 1005 gtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaa 1056
||||||||| ||||| || || || ||||| || || ||||| |||||||||
Sbjct: 361 gtatgttcagactcgttctgaactggaagaaaaccacatgaaacagtacaaa 412
>gb|BU834950.1|BU834950 T067F08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 733
Score = 157 bits (79), Expect = 2e-036
Identities = 199/239 (83%)
Strand = Plus / Plus
Query: 1591 caggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatgg 1650
||||||||||| | ||| ||| | || |||||||| |||||| | || || ||||| |||
Sbjct: 193 caggtgatgcccacgagtaatttgtcagatgggcagaggagcagggtgatatttgcttgg 252
Query: 1651 ttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacatt 1710
|||||| |||||| || ||| |||| || || |||||||| || || |||||||| |||
Sbjct: 253 ctggcatttaggcaaccccaaatgctccttctggatgagccaaccaaccatttggatatt 312
Query: 1711 gagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtg 1770
|||||||| |||||||||||||||||| |||| ||||||||||| ||| |||| | ||
Sbjct: 313 gagaccatcgactccctggcggaggcattgaaagagtgggatgggggtctggttctcgtt 372
Query: 1771 agccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatca 1829
||||||||||||||||| || |||||||| || || ||||| ||||| |||||||||||
Sbjct: 373 agccatgatttcaggctcataaaccaggtagcgcaggagatatgggtatgtgagaatca 431
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1414 ttagatggcatggttcggcgccacaatcac 1443
||||||||||||||||| || |||||||||
Sbjct: 16 ttagatggcatggttcgccggcacaatcac 45
>gb|CA925024.1|CA925024 MTU7TL.P12.F11 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 671
Score = 157 bits (79), Expect = 2e-036
Identities = 328/411 (79%)
Strand = Plus / Minus
Query: 609 acaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatgga 668
|||||||||||| ||||| ||||| | || ||| ||||||||||| | || || |||||
Sbjct: 441 acaggatgatggaggtggagaagctcttgatcgtatttatgagcgtttggaggccatgga 382
Query: 669 tgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaaca 728
|| | ||||||||| || || |||||||||||||| |||||||| || ||| |||| ||
Sbjct: 381 tgtggcaactgcagagaaacgtgctgctgaaattttgtttggtcttggatttaacaagca 322
Query: 729 aatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagc 788
||||||| ||||||||||| |||||| || || || ||| | ||||||||||| |||||
Sbjct: 321 aatgcaaacaaagaaaactcgagatttttcaggtggctggagaatgaggattgcattagc 262
Query: 789 aagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctaga 848
| || |||| ||||| ||||| |||| || ||||| ||||| || || |||| ||
Sbjct: 261 tcgggctttgttcatgaacccaactgtcctcttacttgacgagccaaccaatcatcctga 202
Query: 849 tcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgt 908
|| || || |||||||||||||| || || | ||||| ||||| ||||| || |||||
Sbjct: 201 cctcgaagcctgtgtctggttggaggaaactttaaagaactttgaacgcattctggttgt 142
Query: 909 catatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaa 968
| || ||||| |||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 141 ggtttctcactctcaagatttcttgaatggtgtgtgcacaaacattatccacatgcaaag 82
Query: 969 caagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcg 1019
|||||| | || | |||||||||||||| |||||||||||||| |||||
Sbjct: 81 caagaaattgaaaatctacaccggtaactatgatcagtatgttcagactcg 31
Score = 48.1 bits (24), Expect = 0.001
Identities = 126/160 (78%)
Strand = Plus / Minus
Query: 383 tggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaaatcta 442
||||||| ||||| || || ||||| || || ||||| || ||||| ||||| ||||| |
Sbjct: 667 tggagctaaactatggcagacgatatggattacttggtttaaatggatgtgggaaatcaa 608
Query: 443 ctcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacatatacc 502
| || || | |||||||| || |||||||||| || || || |||||||||||||| |
Sbjct: 607 cactcctagctgcaatagggtgtcgagaacttccaattccagagcacatggacatatatc 548
Query: 503 atctaagccatgagattgaagcttctgacatgtctgcact 542
| || | | ||||| |||||||| ||||||||| ||||
Sbjct: 547 acctcaccagggagatcgaagcttccgacatgtcttcact 508
>gb|CA925555.1|CA925555 MTU7TL.P3.A11 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 691
Score = 157 bits (79), Expect = 2e-036
Identities = 328/411 (79%)
Strand = Plus / Minus
Query: 609 acaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatgga 668
|||||||||||| ||||| ||||| | || ||| ||||||||||| | || || |||||
Sbjct: 441 acaggatgatggaggtggagaagctcttgatcgtatttatgagcgtttggaggccatgga 382
Query: 669 tgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaaca 728
|| | ||||||||| || || |||||||||||||| |||||||| || ||| |||| ||
Sbjct: 381 tgtggcaactgcagagaaacgtgctgctgaaattttgtttggtcttggatttaacaagca 322
Query: 729 aatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagc 788
||||||| ||||||||||| |||||| || || || ||| | ||||||||||| |||||
Sbjct: 321 aatgcaaacaaagaaaactcgagatttttcaggtggctggagaatgaggattgcattagc 262
Query: 789 aagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctaga 848
| || |||| ||||| ||||| |||| || ||||| ||||| || || |||| ||
Sbjct: 261 tcgggctttgttcatgaacccaactgtcctcttacttgacgagccaaccaatcatcctga 202
Query: 849 tcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgt 908
|| || || |||||||||||||| || || | ||||| ||||| ||||| || |||||
Sbjct: 201 cctcgaagcctgtgtctggttggaggaaactttaaagaactttgaacgcattctggttgt 142
Query: 909 catatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaa 968
| || ||||| |||||||| | ||||| ||||| || ||||||||||| |||||||
Sbjct: 141 ggtttctcactctcaagatttcttgaatggtgtgtgcacaaacattatccacatgcaaag 82
Query: 969 caagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcg 1019
|||||| | || | |||||||||||||| |||||||||||||| |||||
Sbjct: 81 caagaaattgaaaatctacaccggtaactatgatcagtatgttcagactcg 31
Score = 56.0 bits (28), Expect = 6e-006
Identities = 139/176 (78%)
Strand = Plus / Minus
Query: 367 attgtggattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaat 426
||||| |||||||| ||||||| ||||| || || ||||| || || ||||| || |||
Sbjct: 683 attgttgattctgagctggagctaaactatggcagacgatatggattacttggtttaaat 624
Query: 427 ggctgtggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaa 486
|| ||||| ||||| || || || | |||||||| || |||||||||| || || ||
Sbjct: 623 ggatgtgggaaatcaacactcctagctgcaatagggtgtcgagaacttccaattccagag 564
Query: 487 cacatggacatataccatctaagccatgagattgaagcttctgacatgtctgcact 542
|||||||||||||| || || | | ||||| |||||||| ||||||||| ||||
Sbjct: 563 cacatggacatatatcacctcaccagggagatcgaagcttccgacatgtcttcact 508
>gb|CF119445.1|CF119445 MTU10CS.P1.H11 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 626
Score = 157 bits (79), Expect = 2e-036
Identities = 196/235 (83%)
Strand = Plus / Minus
Query: 1595 tgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttgg 1654
||||||| ||||| ||| | || |||||||| |||||| | || || ||||| ||| |||
Sbjct: 626 tgatgcccatgagtaatttgtcagatgggcagaggagcagggtgatatttgcttggctgg 567
Query: 1655 catataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgaga 1714
||| |||||| || ||| |||| || || |||||||| || || |||||||| |||||||
Sbjct: 566 catttaggcaaccccaaatgctccttctggatgagccaaccaaccatttggatattgaga 507
Query: 1715 ccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagcc 1774
|||| |||||||||||||||||| |||| ||||||||||| ||| |||| | || ||||
Sbjct: 506 ccatcgactccctggcggaggcattgaaagagtgggatgggggtctggttctcgttagcc 447
Query: 1775 atgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatca 1829
||||||||||||| || |||||||| || || ||||| ||||| |||||||||||
Sbjct: 446 atgatttcaggctcataaaccaggtagcgcaggagatatgggtatgtgagaatca 392
>gb|CN193046.1|CN193046 PtdH315 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 524
Score = 157 bits (79), Expect = 2e-036
Identities = 240/291 (82%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| |||| ||| | || |||||||| |||||| | || |
Sbjct: 33 caggcaaggcccaggtgatgcccatgaagaacttgtcagatgggcagaggagcagggtga 92
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||| ||||||||||| || |||||||||| |||||||| ||||| |
Sbjct: 93 tatttgcttggctggcgtataggcagccccacttgctactgctggatgagccaacaaacc 152
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggt- 1758
||||||| |||||||| |||||||| ||||| |||||| |||||||||||||||| |||
Sbjct: 153 atttggatattgagacgattgactctctggctgaggcattgaatgagtgggatgggggtc 212
Query: 1759 ttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtg 1818
||| |||| || ||||||||||||||||| || || ||||| || | |||||||||||
Sbjct: 213 ttgttctt-gttagccatgatttcaggctcataaatcaggtagcagaggagatttgggta 271
Query: 1819 tgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 1869
|| || ||||| || || || ||||||| ||||| || ||||| ||||||
Sbjct: 272 tgcgaaaatcaagctgttacccggtgggagggtgacattatggacttcaag 322
>gb|CX178353.1|CX178353 D08_45-112_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 668
Score = 157 bits (79), Expect = 2e-036
Identities = 196/235 (83%)
Strand = Plus / Minus
Query: 1595 tgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttgg 1654
||||||| ||||| ||| | || |||||||| |||||| | || || ||||| ||| |||
Sbjct: 668 tgatgcccatgagtaatttgtcagatgggcagaggagcagggtgatttttgcttggctgg 609
Query: 1655 catataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgaga 1714
||| |||||| || ||| |||| || || |||||||| || || |||||||| |||||||
Sbjct: 608 catttaggcaaccccaaatgctccttctggatgagccaaccaaccatttggatattgaga 549
Query: 1715 ccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagcc 1774
|||| |||||||||||||||||| |||| ||||||||||| ||| |||| | || ||||
Sbjct: 548 ccatcgactccctggcggaggcattgaaagagtgggatgggggtctggttcttgttagcc 489
Query: 1775 atgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatca 1829
||||||||||||| || |||||||| || || ||||| ||||| |||||||||||
Sbjct: 488 atgatttcaggctcataaaccaggtagcgcaggagatatgggtatgtgagaatca 434
>gb|CF118905.1|CF118905 MTU10CS.P10.H09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 606
Score = 151 bits (76), Expect = 1e-034
Identities = 178/212 (83%)
Strand = Plus / Minus
Query: 1618 gatgggcaaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgcta 1677
|||||||| |||||| | || || ||||| ||| |||||| |||||| || ||| ||||
Sbjct: 604 gatgggcagaggagcagggtaatatttgcttggctggcatttaggcaaccccaaatgctc 545
Query: 1678 ctgctcgatgagccgacaaatcatttggacattgagaccattgactccctggcggaggca 1737
|| || |||||||| || || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 544 cttctggatgagccaaccaaccatttggatattgagaccatcgactccctggcggaggca 485
Query: 1738 ctgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccag 1797
|||| ||||||||||| ||| |||| | || ||||||||||||||||| || ||||||
Sbjct: 484 ttgaaagagtgggatgggggtctggttctcgttagccatgatttcaggctcataaaccag 425
Query: 1798 gttgctcaagagatttgggtgtgtgagaatca 1829
|| || || ||||| ||||| |||||||||||
Sbjct: 424 gtagcgcaggagatatgggtatgtgagaatca 393
>gb|CF119472.1|CF119472 MTU10CS.P2.C09 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 618
Score = 151 bits (76), Expect = 1e-034
Identities = 178/212 (83%)
Strand = Plus / Minus
Query: 1618 gatgggcaaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgcta 1677
|||||||| |||||| | || || ||||| ||| |||||| |||||| || ||| ||||
Sbjct: 604 gatgggcagaggagcagggtaatatttgcttggctggcatttaggcaaccccaaatgctc 545
Query: 1678 ctgctcgatgagccgacaaatcatttggacattgagaccattgactccctggcggaggca 1737
|| || |||||||| || || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 544 cttctggatgagccaaccaaccatttggatattgagaccatcgactccctggcggaggca 485
Query: 1738 ctgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccag 1797
|||| ||||||||||| ||| |||| | || ||||||||||||||||| || ||||||
Sbjct: 484 ttgaaagagtgggatgggggtctggttctcgttagccatgatttcaggctcataaaccag 425
Query: 1798 gttgctcaagagatttgggtgtgtgagaatca 1829
|| || || ||||| ||||| |||||||||||
Sbjct: 424 gtagcgcaggagatatgggtatgtgagaatca 393
>gb|CK099947.1|CK099947 A091P34.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A091P34 5', mRNA sequence
Length = 563
Score = 151 bits (76), Expect = 1e-034
Identities = 197/236 (83%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 1594 gtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttg 1653
|||||||| ||||| ||| | || |||||||| |||||| | || || ||||| ||| ||
Sbjct: 217 gtgatgcccatgagtaatttgtcagatgggcagaggagcag-gtgatatttgcttggctg 275
Query: 1654 gcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgag 1713
|||| |||||| || ||| |||| || || |||||||| || || |||||||| ||||||
Sbjct: 276 gcatttaggcaaccccaaatgctccttctggatgagccaaccaaccatttggatattgag 335
Query: 1714 accattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagc 1773
||||| |||||||||||||||||| |||| ||||||||||| ||| |||| | || |||
Sbjct: 336 accatcgactccctggcggaggcattgaaagagtgggatgggggtctggttctcgttagc 395
Query: 1774 catgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatca 1829
|||||||||||||| || |||||||| || || ||||| ||||| |||||||||||
Sbjct: 396 catgatttcaggctcataaaccaggtagcgcaggagatatgggtatgtgagaatca 451
>gb|CX185015.1|CX185015 E11_45-47_09.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 515
Score = 151 bits (76), Expect = 1e-034
Identities = 184/220 (83%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| ||||| ||| | || |||||||| |||||| | || |
Sbjct: 291 caggcaaggcccaggtgatgcccatgagtaatttgtcagatgggcagaggagcagggtga 350
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||||| |||||| || ||| |||| || || |||||||| || || |
Sbjct: 351 tttttgcttggctggcatttaggcaaccccaaatgctccttctggatgagccaaccaacc 410
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtt 1759
||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||| |||
Sbjct: 411 atttggatattgagaccatcgactccctggcggaggcattgaaagagtgggatgggggtc 470
Query: 1760 tggtcttggtgagccatgatttcaggctgatcaaccaggt 1799
|||| | || ||||||||||||||||| || ||||||||
Sbjct: 471 tggttcttgttagccatgatttcaggctcataaaccaggt 510
Score = 63.9 bits (32), Expect = 2e-008
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1384 ctgaagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcac 1443
|||||||||||||| |||||| | | ||| ||||||||||||||||| || |||||||||
Sbjct: 95 ctgaagcttatgacgggtgacttggttcctttagatggcatggttcgccggcacaatcac 154
>gb|CA926568.1|CA926568 MTU6CR.P16.E09 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 679
Score = 149 bits (75), Expect = 5e-034
Identities = 295/367 (80%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||| |||||||||||||| ||||| ||||| | || ||| ||||||||||| | ||
Sbjct: 314 ttggcggcacaggatgatggaggtggagaagctcttgatcgtatttatgagcgtttggag 373
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| ||||||| | ||||||||| || || |||||||||||||| |||||||| || |||
Sbjct: 374 gccatggatgtggcaactgcagagaaacgtgctgctgaaattttgtttggtcttggattt 433
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
|||| ||||||||| ||||||||||| |||||| || || || ||| | |||||||||
Sbjct: 434 aacaagcaaatgcaaacaaagaaaactcgagatttttcaggtggctggagaatgaggatt 493
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| ||||| | || |||| ||||| ||||| |||| || ||||||||||| || ||
Sbjct: 494 gcattagctcgggctttgttcatgaacccaactgtcctcttacttgatgagccaaccaat 553
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| || || || || |||||||||||||| || || | ||||| ||||| |||||
Sbjct: 554 catcttgacctcgaagcctgtgtctggttggagga-actttaaagaactttgaacgcatt 612
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|| ||||| | || ||||| ||||||||||| ||||| ||||| || |||||||| ||
Sbjct: 613 ctggttgtggtttctcactctcaagattttctgaatggtgtgtgcacaaacattattcac 672
Query: 961 atgcaaa 967
|||||||
Sbjct: 673 atgcaaa 679
Score = 77.8 bits (39), Expect = 2e-012
Identities = 153/191 (80%)
Strand = Plus / Plus
Query: 352 catgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacggt 411
||||| ||||| || ||||| |||||||| ||||||| ||||| || || ||||| ||
Sbjct: 65 catggacatgatctcattgttgattctgagctggagctaaactatggcagacgatatgga 124
Query: 412 ttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagagaa 471
|| ||||| |||||||| ||||| ||||| || || || | |||||||| || |||||
Sbjct: 125 ttacttggtttgaatggatgtgggaaatcaacactcctagctgcaatagggtgtcgagaa 184
Query: 472 cttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctgac 531
||||| || || || |||||||||||||| || || | | ||||| ||||||||||||
Sbjct: 185 cttccaattccagagcacatggacatatatcacctcaccagggagatcgaagcttctgac 244
Query: 532 atgtctgcact 542
|||||| ||||
Sbjct: 245 atgtcttcact 255
>gb|CA929470.1|CA929470 MTU2CA.P14.B12 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 472
Score = 149 bits (75), Expect = 5e-034
Identities = 333/419 (79%)
Strand = Plus / Minus
Query: 601 ttggctgcacaggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagat 660
||||| ||||||||||||| |||| ||||| | || ||| ||||||||||| | ||
Sbjct: 449 ttggcggcacaggatgatgaaggtgcagaagctcttgatcgtatttatgagcgtttggag 390
Query: 661 gcaatggatgctggaactgcagaaaagcgagctgctgaaattttatttggtctgggtttt 720
|| ||||||| | ||||||||| || || ||||||||||| || |||||||| || |||
Sbjct: 389 gccatggatgtggcaactgcagagaaacgtgctgctgaaatattgtttggtcttggattt 330
Query: 721 gacaaacaaatgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggatt 780
|||| ||||||||| ||||||||||| |||||| || || || ||| | |||||||||
Sbjct: 329 aacaagcaaatgcaaacaaagaaaactcgagatttttcaggtggctggagaatgaggatt 270
Query: 781 gctttagcaagagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaac 840
|| ||||| | || |||| ||||| ||||| |||| || ||||||||||| || ||
Sbjct: 269 gcattagctcgggctttgttcatgaacccaactgtcctcttacttgatgagccaaccaat 210
Query: 841 catctagatcttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcata 900
||||| || || || || |||||||||||||| || || | ||||| ||||| |||||
Sbjct: 209 catcttgacctcgaagcctgtgtctggttggaggaaactttaaagaactttgaacgcatt 150
Query: 901 cttgttgtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccat 960
|| ||||| | || ||||| |||||||| | ||||| ||||| || |||||||||||
Sbjct: 149 ctggttgtggtttctcactctcaagatttcttgaatggtgtgtgcacaaacattatccac 90
Query: 961 atgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcg 1019
||||||| |||||| | || | ||||| |||||||| |||||||||||||| |||||
Sbjct: 89 atgcaaagcaagaaattgaaaatctacactggtaactatgatcagtatgttcagactcg 31
>gb|AJ773986.1|AJ773986 AJ773986 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300007D02F1, mRNA sequence
Length = 654
Score = 149 bits (75), Expect = 5e-034
Identities = 239/291 (82%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1580 caggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtca 1639
|||| ||||| ||||||||||| |||| ||| | || |||||||| |||||| | || |
Sbjct: 115 caggcaaggcccaggtgatgcccatgaagaacttgtcagatgggcagaggagcagggtga 174
Query: 1640 tctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatc 1699
| ||||| ||| |||| ||||||||||| || |||||||||| |||||||| ||||| |
Sbjct: 175 tatttgcttggctggcgtataggcagccccacttgctactgctggatgagccaacaaacc 234
Query: 1700 atttggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggt- 1758
||||||| || ||||| |||||||| ||||| |||||| |||||||||||||||| |||
Sbjct: 235 atttggatatcgagacgattgactctctggctgaggcattgaatgagtgggatgggggtc 294
Query: 1759 ttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtg 1818
||| |||| || ||||||||||||||||| || || ||||| || | |||||||||||
Sbjct: 295 ttgttctt-gttagccatgatttcaggctcataaatcaggtagcagaggagatttgggta 353
Query: 1819 tgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 1869
|| || ||||| || || || ||||||| ||||| || ||||| ||||||
Sbjct: 354 tgcgaaaatcaagctgttacccggtgggagggtgacattatggacttcaag 404
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 296,831
Number of Sequences: 369679
Number of extensions: 296831
Number of successful extensions: 79591
Number of sequences better than 0.5: 123
Number of HSP's better than 0.5 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79125
Number of HSP's gapped (non-prelim): 343
length of query: 2083
length of database: 203,408,664
effective HSP length: 20
effective length of query: 2063
effective length of database: 196,015,084
effective search space: 404379118292
effective search space used: 404379118292
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)